mRNA_M-pyrifera_M_contig88607.20565.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Match: U5CVD1_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=U5CVD1_AMBTC) HSP 1 Score: 126 bits (317), Expect = 2.040e-36 Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 1 Query: 40 EKNFGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG 231 E +GLTITS+YAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG Sbjct: 29 ELGWGLTITSRYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG 92
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Match: A0A5D3BPI7_CUCME (Uncharacterized protein n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A5D3BPI7_CUCME) HSP 1 Score: 125 bits (315), Expect = 4.000e-36 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 1 Query: 43 KNFGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG 231 KN+GLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYC DDTVGEVLRKNSST G Sbjct: 29 KNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCSDDTVGEVLRKNSSTSG 91
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Match: A0A445BUJ7_ARAHY (Uncharacterized protein n=4 Tax=Magnoliopsida TaxID=3398 RepID=A0A445BUJ7_ARAHY) HSP 1 Score: 120 bits (302), Expect = 4.860e-34 Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 1 Query: 52 GLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG 231 GLT+ SQYAF+SCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSS PG Sbjct: 40 GLTMNSQYAFISCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSAPG 99
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Match: A0A5A7V9S8_CUCME (Uncharacterized protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7V9S8_CUCME) HSP 1 Score: 117 bits (294), Expect = 7.370e-33 Identity = 60/72 (83.33%), Postives = 62/72 (86.11%), Query Frame = 1 Query: 13 GATEVLRIQEKNFGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTP 228 G +L KN+GLTITSQYAFLSCLSSFMVRYSGVLGVEE HQSIP VVKLYCGDDTVGEVLRKNSSTP Sbjct: 3 GQRPLLSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEAHQSIPK-VVKLYCGDDTVGEVLRKNSSTP 73
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Match: A0A0D2SMV0_GOSRA (Uncharacterized protein n=26 Tax=Gossypium TaxID=3633 RepID=A0A0D2SMV0_GOSRA) HSP 1 Score: 113 bits (282), Expect = 2.880e-31 Identity = 56/65 (86.15%), Postives = 60/65 (92.31%), Query Frame = 1 Query: 43 KNFGLTITSQYAF--LSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG 231 KN+GL +TSQYAF L+ LSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGEVLR+NSSTPG Sbjct: 13 KNWGLIVTSQYAFPFLARLSSFMVRYSGVLGVEEQHQSIPNLVVKLYCGDDTVGEVLRQNSSTPG 77
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Match: A0A6N2NAY5_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2NAY5_SALVM) HSP 1 Score: 122 bits (307), Expect = 6.330e-31 Identity = 66/105 (62.86%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 1 PCGGGATEVLRIQEK------------------------------NFGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSST 225 PCG GATEVLRIQEK N+GLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCG+DTVGE + N S+ Sbjct: 457 PCGDGATEVLRIQEKTGRLEPCSYMTRSIRSVMEGQRPLVSPTVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGEDTVGEGIPGNRSS 561
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Match: A0A5N6LV43_9ASTR (Uncharacterized protein n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A5N6LV43_9ASTR) HSP 1 Score: 114 bits (285), Expect = 1.950e-30 Identity = 63/109 (57.80%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 1 PCGGGATEVLRIQEKNFGLTITSQYA--------------------------------FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG 231 PCG GATEVLRIQEK Y F+SCLSSFMVRYSGVL +EEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG Sbjct: 73 PCGDGATEVLRIQEKVTARRAVYHYDRCQVELCPPSLSSKGWKGRVLWCPELGPRNHYFISCLSSFMVRYSGVLVIEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG 181
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Match: A0A5K1HK92_9MAGN (Uncharacterized protein (Fragment) n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1HK92_9MAGN) HSP 1 Score: 105 bits (263), Expect = 4.250e-28 Identity = 53/71 (74.65%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 7 GGGATEVLRIQEKNFGLTITSQY--AFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRK 213 G G ++ + KN+GLTITSQY AFLSCLSSFMVRYSG LGVEEPHQSIPNLVVKLYCGDDTVG K Sbjct: 13 GRGRFPLVSLPVKNWGLTITSQYNNAFLSCLSSFMVRYSGALGVEEPHQSIPNLVVKLYCGDDTVGRSCGK 83
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Match: A0A6D2K9K4_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2K9K4_9BRAS) HSP 1 Score: 107 bits (266), Expect = 4.660e-28 Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 1 Query: 43 KNFGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSST 225 KN+ LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGE N+S+ Sbjct: 13 KNWSLTITSQYAFLACLSSFMVRYSGVLGVEEQHQSIPNLVVKLYCGDDTVGEGTPGNTSS 73
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Match: A0A6D2HB29_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HB29_9BRAS) HSP 1 Score: 107 bits (266), Expect = 4.930e-28 Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 1 Query: 43 KNFGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSST 225 KN+ LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGE N+S+ Sbjct: 13 KNWSLTITSQYAFLACLSSFMVRYSGVLGVEEQHQSIPNLVVKLYCGDDTVGEGTPGNTSS 73 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88607.20565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88607.20565.1 >prot_M-pyrifera_M_contig88607.20565.1 ID=prot_M-pyrifera_M_contig88607.20565.1|Name=mRNA_M-pyrifera_M_contig88607.20565.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp PCGGGATEVLRIQEKNFGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSback to top mRNA from alignment at M-pyrifera_M_contig88607:62..581- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88607.20565.1 ID=mRNA_M-pyrifera_M_contig88607.20565.1|Name=mRNA_M-pyrifera_M_contig88607.20565.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=520bp|location=Sequence derived from alignment at M-pyrifera_M_contig88607:62..581- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88607:62..581- >mRNA_M-pyrifera_M_contig88607.20565.1 ID=mRNA_M-pyrifera_M_contig88607.20565.1|Name=mRNA_M-pyrifera_M_contig88607.20565.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig88607:62..581- (Macrocystis pyrifera P11B4 male)back to top |