mRNA_M-pyrifera_M_contig88513.20550.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 4.150e-21 Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 4 GYDGGDCCECTCVST--SDFTCGDEQFGGFACVDPSAPCVDDDDVTVIPEDASYTYTDFTTSLGCIPSFFSDAYCDSVNNNEICG 252 G+DGGDCCECTCVS D++C GFACVDP+APCVDDDD+T+ +L C P F D +CD NNNEICG Sbjct: 5 GFDGGDCCECTCVSVYDDDYSCSSTD-SGFACVDPTAPCVDDDDITI------------EQALNCFPREFGDGWCDQENNNEICG 76
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Match: D7G6I3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6I3_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 1.090e-20 Identity = 42/84 (50.00%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 1 SGYDGGDCCECTCVSTSDFTCGDEQFGGFACVDPSAPCVDDDDVTVIPEDASYTYTDFTTSLGCIPSFFSDAYCDSVNNNEICG 252 +GYDGGDCCECTCVS ++ CG GG+AC+DP+A CV+DDDVT F + C+ DAYCD NN E CG Sbjct: 29 AGYDGGDCCECTCVSEGEYECG---AGGYACIDPAAECVNDDDVT------------FQIASTCVADMIGDAYCDEPNNVEECG 97
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Match: A0A6H5L262_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L262_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 3.020e-20 Identity = 41/83 (49.40%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 4 GYDGGDCCECTCVSTSDFTCGDEQFGGFACVDPSAPCVDDDDVTVIPEDASYTYTDFTTSLGCIPSFFSDAYCDSVNNNEICG 252 GYDGGDCCECTCV+ ++ CG GG+AC+DP+A CV+DDDVT F + C+ DAYCD NN E CG Sbjct: 62 GYDGGDCCECTCVAEGEYECG---AGGYACIDPAAECVNDDDVT------------FQIASSCVADMIGDAYCDEPNNVEECG 129
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.530e-17 Identity = 45/85 (52.94%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 4 GYDGGDCCECTCVSTSDFTCGDEQFGGFACVDPSAPCVDDDDVTVIPEDASYTYTD---FTTSLGCIPSFFSDAYCDSVNNNEIC 249 GYDGGDCCECTCV S FTCG +GGFAC+DPSA CVDDD++T ED + + D + S+G D +C NNNE+C Sbjct: 18 GYDGGDCCECTCVDAS-FTCG---YGGFACIDPSAACVDDDNIT---EDIAESCNDGGGYVASIG-------DGFCSDENNNEVC 88
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 1.340e-16 Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 4 GYDGGDCCECTCVST----SDFTCGDEQFGGFACVDPSAPCVDDDDVTVIPEDASYTYTDFTTSLGCIPSFFSDAYCDSVNNNEICG 252 GYDGGDCCECTC + ++ C + +G FAC+DP APCVDDDD+T+ + C+ S + YCD NNNEICG Sbjct: 44 GYDGGDCCECTCQNPWGDDDEWFCSKDGYG-FACIDPDAPCVDDDDITI------------EIAQNCVTSDLGNGYCDEDNNNEICG 117
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 2.660e-15 Identity = 40/84 (47.62%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 4 GYDGGDCCECTCVS--TSDFTCGDEQFGGFACVDPSAPCVDDDDVTVIPEDASYTYTDFTTSLGCIPSFFSDAYCDSVNNNEIC 249 GYDGGDCCECTCV +++F C + FAC+DP+APCVDDDDVT C+ + D YCD+ NN EIC Sbjct: 77 GYDGGDCCECTCVVDWSAEFGCTE-----FACIDPTAPCVDDDDVTA------------DALENCMMEYLGDGYCDTYNNIEIC 143
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 4.190e-15 Identity = 41/87 (47.13%), Postives = 48/87 (55.17%), Query Frame = 1 Query: 4 GYDGGDCCECTCVST----SDFTCGDEQFGGFACVDPSAPCVDDDDVTVIPEDASYTYTDFTTSLGCIPSFFSDAYCDSVNNNEICG 252 GYDGGDCCECTCV+ D+ C + GFAC+DP A CVDDDD+TV + C D +CD NNNEICG Sbjct: 20 GYDGGDCCECTCVNPWGDDDDWVCS-KDGSGFACIDPDASCVDDDDITV------------EIAQNCDTWGLGDGWCDQDNNNEICG 93
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 5.510e-15 Identity = 39/82 (47.56%), Postives = 48/82 (58.54%), Query Frame = 1 Query: 7 YDGGDCCECTCVSTSDFTCGDEQFGGFACVDPSAPCVDDDDVTV-IPEDASYTYTDFTTSLGCIPSFFSDAYCDSVNNNEIC 249 YDGGDCCECTC T + CG ++ GFAC+DP APCVDDD TV + ++ Y P D +CD NNNE+C Sbjct: 10 YDGGDCCECTCEDTPNNKCG--RWSGFACIDPEAPCVDDDSFTVDMIDNCDY------------PGGIGDGWCDEDNNNELC 77
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 2.530e-14 Identity = 40/84 (47.62%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 1 SGYDGGDCCECTCVSTSDFTCGDEQFGGFACVDPSAPCVDDDDVTVIPEDASYTYTDFTTSLGCIPSFFSDAYCDSVNNNEICG 252 SGYDGGDCCECTC D D + F+C+DP+APCV+DDD+TV D + G + S D +CDS NN E CG Sbjct: 8 SGYDGGDCCECTCEGDDD----DYKCMQFSCIDPNAPCVNDDDITV----------DMFDNCGYV-SGIGDGWCDSNNNKEACG 76
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Match: A0A6H5K4R2_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R2_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 4.700e-14 Identity = 41/88 (46.59%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 7 YDGGDCCECTCVST------SDFTCGDEQFGGFACVDPSAPCVDDDDVTVIPEDASYTYTDFTTSLGCIPSFFSDAYCDSVNNNEICG 252 YDGGDCCECTC + S C +GGFAC+DP APCVDDD VTV D YT + YCD VNN+ CG Sbjct: 71 YDGGDCCECTCDPSRYPWYDSGEGCQTGMYGGFACIDPDAPCVDDDIVTVEMMDLCYT------------GQIGNGYCDDVNNSPECG 146 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88513.20550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88513.20550.1 >prot_M-pyrifera_M_contig88513.20550.1 ID=prot_M-pyrifera_M_contig88513.20550.1|Name=mRNA_M-pyrifera_M_contig88513.20550.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp SGYDGGDCCECTCVSTSDFTCGDEQFGGFACVDPSAPCVDDDDVTVIPEDback to top mRNA from alignment at M-pyrifera_M_contig88513:72..329- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88513.20550.1 ID=mRNA_M-pyrifera_M_contig88513.20550.1|Name=mRNA_M-pyrifera_M_contig88513.20550.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=258bp|location=Sequence derived from alignment at M-pyrifera_M_contig88513:72..329- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88513:72..329- >mRNA_M-pyrifera_M_contig88513.20550.1 ID=mRNA_M-pyrifera_M_contig88513.20550.1|Name=mRNA_M-pyrifera_M_contig88513.20550.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig88513:72..329- (Macrocystis pyrifera P11B4 male)back to top |