mRNA_M-pyrifera_M_contig88496.20546.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Match: UPI001CE3239C (M12 family metallo-peptidase n=1 Tax=Chryseobacterium sp. RG1 TaxID=2801334 RepID=UPI001CE3239C) HSP 1 Score: 55.8 bits (133), Expect = 1.130e-6 Identity = 35/113 (30.97%), Postives = 55/113 (48.67%), Query Frame = 1 Query: 4 AWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRIVGTSERTYTGEPCDNLGT-GNYSGDQDFIYGQVIDFSVYINCTPLGNTDNSTYLSSLQLDDTP 339 AWIDWN + ++DSE V A+ S +VP A+ ++ LRMR+V Y G + L +Y+ +F YG+ D++V + LG + S S +Q+ P Sbjct: 824 AWIDWNRNGTFEDSEKVLNAAVAAAIPTQYTSSITVPSSAIENQPLRMRVVFI----YAGSGNNGLSIPSDYACGTNFYYGETEDYNVVVTAA-LGTREVSNTNSGIQIYPNP 931
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Match: A0A4Q1FNW5_9FLAO (Propanediol utilization protein n=1 Tax=Chryseobacterium sp. CH25 TaxID=713559 RepID=A0A4Q1FNW5_9FLAO) HSP 1 Score: 55.5 bits (132), Expect = 1.550e-6 Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 1 Query: 4 AWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRIVGTSERTYTGEPCDNLGTGNYSGDQDF 234 AWID+N D ++ DSEM+FT+ + V+G+FSVP DAVT + L MR+ Y +P D + Y +D+ Sbjct: 821 AWIDFNRDGIFSDSEMIFTSLPNKI--TPVSGTFSVPMDAVTGKNLIMRVA----LAYENQPLDGCNSQEYGEIEDY 891
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Match: A0A1M5X3U3_9FLAO (Por secretion system C-terminal sorting domain-containing protein n=2 Tax=Chryseobacterium TaxID=59732 RepID=A0A1M5X3U3_9FLAO) HSP 1 Score: 54.3 bits (129), Expect = 3.930e-6 Identity = 38/113 (33.63%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 4 AWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRIVGTSERTYTGEPCDNLGTGNYSGDQDFIYGQVIDFSVYINCTPLGNTDNSTYLSSLQLDDTPL 342 AWID+N D + DSE++FT+ ++ V+G+FSVP +A TD+ + MR+V Y +P +G F YG++ D+ V I LG +D S + +Q+ P+ Sbjct: 814 AWIDFNRDGNFTDSEIIFTSPSNMV--TPVSGTFSVPANAYTDKKVIMRVV----MAYEDQP--------ENGCNGFAYGEIEDYPVQIQLA-LGTSDVSNPNNDIQIYPNPV 911
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Match: UPI001E630B56 (GEVED domain-containing protein n=1 Tax=Chryseobacterium oranimense TaxID=421058 RepID=UPI001E630B56) HSP 1 Score: 53.9 bits (128), Expect = 4.570e-6 Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 4 AWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRIVGTSERTYTGEPCDNLGTGNYSGDQDFIYGQVIDFSVYINCTPLGNTDNSTYLSSLQLDDTP 339 AWID+N D + DSE++FT+ ++ V+G+FSVP +A TD+ + MR+V Y +P +G F YG++ D+ V I LG +D S + +Q+ P Sbjct: 166 AWIDFNRDGNFTDSEIIFTSPSNMV--TPVSGTFSVPANAYTDKKVIMRVV----MAYEDQP--------ENGCNGFAYGEIEDYPVQIQLA-LGTSDVSNPNNDIQIYPNP 262
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Match: A0A086BLH6_9FLAO (Propanediol utilization protein n=1 Tax=Chryseobacterium piperi TaxID=558152 RepID=A0A086BLH6_9FLAO) HSP 1 Score: 53.9 bits (128), Expect = 5.360e-6 Identity = 38/112 (33.93%), Postives = 58/112 (51.79%), Query Frame = 1 Query: 4 AWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRIVGTSERTYTGEPCDNLGTGNYSGDQDFIYGQVIDFSVYINCTPLGNTDNSTYLSSLQLDDTP 339 AWID+N D V+ DSE+++T+T ++ V+G+FSVP DA TD + MR++ Y +P SG +G+V D+ V I L D +S+Q+ P Sbjct: 822 AWIDFNRDGVFSDSEIIYTSTP--SITTPVSGTFSVPADAYTDGNVIMRVI----LAYEYQPN--------SGCSSQRFGEVEDYPVLIQSEQLATNDLLKDNNSIQIYPNP 919
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Match: A0A0Q5Q3C4_9FLAO (Propanediol utilization protein n=1 Tax=Chryseobacterium sp. Leaf180 TaxID=1736289 RepID=A0A0Q5Q3C4_9FLAO) HSP 1 Score: 53.1 bits (126), Expect = 9.970e-6 Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 4 AWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRIVGTSERTYTGEPCDNLGTGNYSGDQDFIYGQVIDFSVYINCTPLGNTDNSTYLSSLQLDDTP 339 AWID+N + V++DSE + T+ N + +F+VP +AV LR+R VG T G N G GNY + G+ D++V I+ PL + S + +Q+ P Sbjct: 807 AWIDFNRNGVFEDSERILTSQVAANTPNPLTVTFTVPANAVQGLGLRLR-VGMLYTTSAGATIVN-GCGNYGNN----LGEFEDYNVVISANPLATVETSNNSNGIQMYPNP 912
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Match: A0A2X2XP31_9FLAO (Por secretion system C-terminal sorting domain n=1 Tax=Chryseobacterium jejuense TaxID=445960 RepID=A0A2X2XP31_9FLAO) HSP 1 Score: 53.1 bits (126), Expect = 9.980e-6 Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 1 Query: 4 AWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRIVGTSERTYTGEPCDNLGTGNYSGDQDF 234 AWID+N D ++ DSEM+FT+ + V+G+FSVP DA T + + MR+ Y +P D + Y +D+ Sbjct: 821 AWIDFNRDGIFSDSEMIFTSLPNKI--TPVSGTFSVPMDAYTGKNIIMRVA----LAYENQPADGCNSQEYGEIEDY 891
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Match: A0A511YDU9_9FLAO (Fibronectin type-III domain-containing protein n=2 Tax=Chryseobacterium lathyri TaxID=395933 RepID=A0A511YDU9_9FLAO) HSP 1 Score: 52.8 bits (125), Expect = 1.360e-5 Identity = 39/115 (33.91%), Postives = 56/115 (48.70%), Query Frame = 1 Query: 4 AWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRI---VGTSERTYTGEPCDNLGTGNYSGDQDFIYGQVIDFSVYINCTPLGNTDNSTYLSSLQLDDTP 339 AWID+N + ++DSE + T+TT A + V +F+VP AVT LRMR+ T+ Y G C GT YG+ D++V + LG D + +QL P Sbjct: 815 AWIDFNRNGNFEDSERILTSTTTTA--SPVTATFTVPATAVTGLGLRMRVGMLYTTTANQYIGNACGAYGT----------YGEFEDYNVVVTAA-LGTKDIANPQDGIQLYPNP 916
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Match: A0A1N7KX95_9FLAO (Por secretion system C-terminal sorting domain-containing protein n=2 Tax=Chryseobacterium TaxID=59732 RepID=A0A1N7KX95_9FLAO) HSP 1 Score: 52.4 bits (124), Expect = 1.860e-5 Identity = 36/112 (32.14%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 4 AWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRIVGTSERTYTGEPCDNLGTGNYSGDQDFIYGQVIDFSVYINCTPLGNTDNSTYLSSLQLDDTP 339 AWID+N D ++ +SEM+FT+ + V+G+FSVP DA T + + MR++ Y +P D + Y G++ D+ V I L D + SS+Q+ P Sbjct: 823 AWIDFNRDGIFSESEMIFTSVPNKV--TPVSGTFSVPADAYTGKNVIMRVI----MGYLAQPIDGCNSQGY--------GEIEDYPVSIE-QQLSTNDVTKDKSSIQVYPNP 919
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Match: A0A1M4TUN5_9FLAO (Por secretion system C-terminal sorting domain-containing protein n=3 Tax=Chryseobacterium TaxID=59732 RepID=A0A1M4TUN5_9FLAO) HSP 1 Score: 52.0 bits (123), Expect = 2.530e-5 Identity = 36/113 (31.86%), Postives = 56/113 (49.56%), Query Frame = 1 Query: 4 AWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRIVGTSERTYTGEPCDNLGTGNYSGDQDFIYGQVIDFSVYINCTPLGNTDNSTYLSSLQLDDTPL 342 AWID+N D + DSE +FT+ ++ V+G+FSVP +A TD + MR+ Y +P +G F YG++ D+ V I + N N S +Q+ P+ Sbjct: 814 AWIDFNRDGNFSDSEKIFTSASNMV--TPVSGTFSVPANAYTDRKVIMRVA----MAYENQP--------ENGCNPFAYGEIEDYPVQIQVSLGTNEVNGANNSGIQIYPNPV 912 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88496.20546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88496.20546.1 >prot_M-pyrifera_M_contig88496.20546.1 ID=prot_M-pyrifera_M_contig88496.20546.1|Name=mRNA_M-pyrifera_M_contig88496.20546.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp QAWIDWNNDKVWDDSEMVFTTTTDNALDNMVAGSFSVPYDAVTDEILRMRback to top mRNA from alignment at M-pyrifera_M_contig88496:21..362+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88496.20546.1 ID=mRNA_M-pyrifera_M_contig88496.20546.1|Name=mRNA_M-pyrifera_M_contig88496.20546.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig88496:21..362+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88496:21..362+ >mRNA_M-pyrifera_M_contig88496.20546.1 ID=mRNA_M-pyrifera_M_contig88496.20546.1|Name=mRNA_M-pyrifera_M_contig88496.20546.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig88496:21..362+ (Macrocystis pyrifera P11B4 male)back to top |