mRNA_M-pyrifera_M_contig88452.20542.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88452.20542.1
Unique NamemRNA_M-pyrifera_M_contig88452.20542.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Match: D7FUM0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUM0_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.680e-16
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 1 
Query:    1 VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVISLAGKKV 168
            V  +V FVDDNTRM W PVTGG NVPA+N  LLP FGMALGGT  DGV+SL G ++
Sbjct:  946 VMSKVRFVDDNTRMPWEPVTGGSNVPAINDFLLPAFGMALGGTVFDGVVSLPGGEL 1001
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BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Match: A0A6H5K166_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K166_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 3.140e-16
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 1 
Query:    1 VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVISLAGKKV 168
            V  +V FVDDNTRM W PVTGG NVPA+N  LLP FGMALGGT  DGV+SL G ++
Sbjct: 1221 VMSKVRFVDDNTRMPWEPVTGGSNVPAINDFLLPAFGMALGGTVFDGVMSLPGGEL 1276
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BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Match: A0A7R8W1F6_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8W1F6_9CRUS)

HSP 1 Score: 65.5 bits (158), Expect = 6.070e-11
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 1 
Query:    1 VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVISL 153
            V +++ F DD+TR MW PVTGGCNVPALN LL PW G++LG T ++G  ++
Sbjct:  762 VMKKIQFRDDSTRGMWIPVTGGCNVPALNDLLSPW-GISLGDTVLEGPFTI 811
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BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Match: A0A6F9DL85_9ASCI (Membrane-bound transcription factor site-1 protease n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DL85_9ASCI)

HSP 1 Score: 60.1 bits (144), Expect = 4.830e-9
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 1 
Query:    1 VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVISLAGKKV 168
            V  +V F D+NTR  W P TGGCN PALNSLL P +G+AL     DG  ++AG ++
Sbjct:  768 VMAKVKFYDENTRRWWMPETGGCNAPALNSLLQP-YGIALSDRVYDGDFTVAGHEM 822
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BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Match: A0A7S4JLL7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JLL7_9EUKA)

HSP 1 Score: 58.9 bits (141), Expect = 1.070e-8
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 1 
Query:    1 VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVISLAGKK 165
            V  Q++F D+NTR  W PVTGG N+PALNSLL   FG+A GG   DG I L GK+
Sbjct:  196 VMDQLHFFDENTRQWWEPVTGGSNLPALNSLLHQ-FGIAFGGRVFDGNIGL-GKE 248
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BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Match: D2V753_NAEGR (Subtilisin-like serine peptidase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V753_NAEGR)

HSP 1 Score: 58.5 bits (140), Expect = 1.690e-8
Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 1 
Query:    1 VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVISLAGKKVS 171
            + + + F DDNT  +WTP+TGGCN+PALN+LL P F +  G     G I++  +K S
Sbjct: 1283 IMKHIKFFDDNTYTVWTPITGGCNLPALNALLDP-FNIVFGTRVYTGEITIGKEKAS 1338
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BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Match: A0A834MY63_VESPE (Peptidase_S8 domain-containing protein n=14 Tax=Vespinae TaxID=7439 RepID=A0A834MY63_VESPE)

HSP 1 Score: 58.2 bits (139), Expect = 2.310e-8
Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 1 
Query:    1 VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVISLAGKKVSPTS 180
            V R+V F D+NTR  W P TGG N+PALN LL P +G+A      DG  SL   + SP S
Sbjct:  753 VMRKVKFYDENTRQWWVPDTGGANIPALNDLLYPNWGIAFSDQVQDGQFSLG--QHSPVS 810
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BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Match: UPI000771B034 (membrane-bound transcription factor site-1 protease isoform X1 n=2 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B034)

HSP 1 Score: 58.2 bits (139), Expect = 2.310e-8
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 1 
Query:    1 VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVISL 153
            V R+V F D+NTR  W P TGG N+PALN LL P +G+A G    DG  +L
Sbjct:  750 VMRKVKFYDENTRQWWVPDTGGANIPALNDLLYPNWGVAFGDWVRDGQFAL 800
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BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Match: UPI001C9A5379 (membrane-bound transcription factor site-1 protease isoform X2 n=1 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A5379)

HSP 1 Score: 56.2 bits (134), Expect = 1.100e-7
Identity = 26/51 (50.98%), Postives = 33/51 (64.71%), Query Frame = 1 
Query:    1 VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVISL 153
            V R+V F D+NTR  W P TGG N+PALN LL P +G+A G    +G  +L
Sbjct:  724 VMRKVKFYDENTRQWWIPDTGGANIPALNDLLYPNWGIAFGDQVRNGQFTL 774
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BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Match: UPI00144348C9 (membrane-bound transcription factor site-1 protease n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI00144348C9)

HSP 1 Score: 56.2 bits (134), Expect = 1.100e-7
Identity = 26/51 (50.98%), Postives = 33/51 (64.71%), Query Frame = 1 
Query:    1 VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVISL 153
            V R+V F D+NTR  W P TGG N+PALN LL P +G+A G    +G  +L
Sbjct:  744 VMRKVKFYDENTRQWWIPDTGGANIPALNDLLYPNWGIAFGDQVRNGQFTL 794
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88452.20542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUM0_ECTSI1.680e-1667.86Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5K166_9PHAE3.140e-1667.86Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A7R8W1F6_9CRUS6.070e-1156.86Hypothetical protein n=1 Tax=Cyprideis torosa TaxI... [more]
A0A6F9DL85_9ASCI4.830e-951.79Membrane-bound transcription factor site-1 proteas... [more]
A0A7S4JLL7_9EUKA1.070e-858.18Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
D2V753_NAEGR1.690e-845.61Subtilisin-like serine peptidase n=1 Tax=Naegleria... [more]
A0A834MY63_VESPE2.310e-850.00Peptidase_S8 domain-containing protein n=14 Tax=Ve... [more]
UPI000771B0342.310e-852.94membrane-bound transcription factor site-1 proteas... [more]
UPI001C9A53791.100e-750.98membrane-bound transcription factor site-1 proteas... [more]
UPI00144348C91.100e-750.98membrane-bound transcription factor site-1 proteas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88452contigM-pyrifera_M_contig88452:201..383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score81.6
Seed ortholog evalue1.4e-13
Seed eggNOG ortholog2880.D7FUM0
Preferred nameMBTPS1
KEGG koko:K08653
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005794,GO:0005795,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006606,GO:0006629,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006972,GO:0006984,GO:0006986,GO:0006991,GO:0006996,GO:0007033,GO:0007040,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008237,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016485,GO:0016787,GO:0017038,GO:0017171,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0019538,GO:0023052,GO:0030968,GO:0031090,GO:0031293,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031984,GO:0032933,GO:0033036,GO:0033365,GO:0033554,GO:0033619,GO:0034504,GO:0034613,GO:0034620,GO:0034976,GO:0035103,GO:0035966,GO:0035967,GO:0036211,GO:0036500,GO:0042175,GO:0042221,GO:0042538,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045540,GO:0045893,GO:0045935,GO:0045944,GO:0046890,GO:0046907,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0062012,GO:0065007,GO:0070011,GO:0070013,GO:0070727,GO:0070887,GO:0071310,GO:0071501,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0080171,GO:0090181,GO:0098588,GO:0098791,GO:0098827,GO:0106118,GO:0140096,GO:1901564,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.serine-type endopeptidase activity
EggNOG OGsCOG1404@1,KOG4266@2759
Ec32 ortholog descriptionPeptidase S8/S53 domain
Ec32 orthologEc-13_004200.2
EC3.4.21.112
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03110
Exons1
Model size183
Cds size183
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816794.5271904-CDS-M-pyrifera_M_contig88452:200..3831622816794.5271904-CDS-M-pyrifera_M_contig88452:200..383Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88452 201..383 +
1692278182.5293047-CDS-M-pyrifera_M_contig88452:200..3831692278182.5293047-CDS-M-pyrifera_M_contig88452:200..383Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88452 201..383 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88452.20542.1prot_M-pyrifera_M_contig88452.20542.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88452 201..383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88452.20542.1

>prot_M-pyrifera_M_contig88452.20542.1 ID=prot_M-pyrifera_M_contig88452.20542.1|Name=mRNA_M-pyrifera_M_contig88452.20542.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=61bp
VSRQVNFVDDNTRMMWTPVTGGCNVPALNSLLLPWFGMALGGTAVDGVIS
LAGKKVSPTS*
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mRNA from alignment at M-pyrifera_M_contig88452:201..383+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88452.20542.1 ID=mRNA_M-pyrifera_M_contig88452.20542.1|Name=mRNA_M-pyrifera_M_contig88452.20542.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=183bp|location=Sequence derived from alignment at M-pyrifera_M_contig88452:201..383+ (Macrocystis pyrifera P11B4 male)
GTATCACGTCAGGTGAATTTCGTGGATGACAACACGCGCATGATGTGGAC
TCCGGTGACCGGAGGGTGCAACGTCCCGGCCCTCAACAGCCTCCTCCTGC
CCTGGTTCGGCATGGCGTTGGGCGGAACAGCCGTGGACGGCGTTATTTCG
CTCGCGGGGAAAAAGGTGAGCCCGACGTCGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88452:201..383+

>mRNA_M-pyrifera_M_contig88452.20542.1 ID=mRNA_M-pyrifera_M_contig88452.20542.1|Name=mRNA_M-pyrifera_M_contig88452.20542.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=366bp|location=Sequence derived from alignment at M-pyrifera_M_contig88452:201..383+ (Macrocystis pyrifera P11B4 male)
GTATCACGTCAGGTGAATTTCGTGGATGACAACACGCGCATGATGTGGAC
TCCGGTGACCGGAGGGTGCAACGTCCCGGCCCTCAACAGCCTCCTCCTGC
CCTGGTTCGGCATGGCGTTGGGCGGAACAGCCGTGGACGGCGTTATTTCG
CTCGCGGGGAAAAAGGTGAGCCCGACGTCGTAAGTATCACGTCAGGTGAA
TTTCGTGGATGACAACACGCGCATGATGTGGACTCCGGTGACCGGAGGGT
GCAACGTCCCGGCCCTCAACAGCCTCCTCCTGCCCTGGTTCGGCATGGCG
TTGGGCGGAACAGCCGTGGACGGCGTTATTTCGCTCGCGGGGAAAAAGGT
GAGCCCGACGTCGTAA
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