mRNA_M-pyrifera_M_contig88421.20538.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88421.20538.1
Unique NamemRNA_M-pyrifera_M_contig88421.20538.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Match: A0A1Y2HZ83_9FUNG (CBF/Mak21 family-domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HZ83_9FUNG)

HSP 1 Score: 141 bits (356), Expect = 1.750e-34
Identity = 100/241 (41.49%), Postives = 136/241 (56.43%), Query Frame = 1
Query:   40 YLSQSAEAGGEVKMHRALLREGTLSDKVAARTVLLQSAPVQEGGHLEGLVALGRSKARREATLAVEALRDVL-----------CEVLLPPDRPLRWFREQVGRSGGKAEL-LVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVRTAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLT-HHPAMKLVVATHVRHFLLQPTTKQRARQAALAFLAQIPLERDWPALA 723
            + S  +  GG+    R +L  GTLSD+V+A T+L+QS+PV     LE L  L + K RR  TL V+AL+D+L              LLP DR L++F + V      ++  LV+ AFEDRLKR +   + SL  L+ D L + R  A      +LA++PE E  LL+LLV KL DQDRK+AA AS  L ++ T HHPAMKLVV   +  F+ +P    RA   A+  L Q+ L  D  A+A
Sbjct:   87 FSSDKSRTGGDAAFMRTILSGGTLSDRVSALTLLVQSSPVHNMLALEQLFNLAKKKNRRMVTLVVDALKDLLTGGGLSSGGVGAAGLLPSDRKLQYFVDLVANIPRPSDAQLVMFAFEDRLKRLVFEFLGSLEQLSHDPLTYIRSKATSVFLDMLAAKPEQEANLLKLLVNKLGDQDRKLAAKASFLLHQLTTEHHPAMKLVVVKAIEEFMHRPHVGARAHYYAVITLNQLMLSHDEVAVA 327          
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Match: A7SXN8_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SXN8_NEMVE)

HSP 1 Score: 134 bits (336), Expect = 1.930e-32
Identity = 93/247 (37.65%), Postives = 142/247 (57.49%), Query Frame = 1
Query:   64 GGEVKMHRALLREGTLSDKVAARTVLLQSAPVQEGGHLEGLVALGRSKARREATLAVEALRDVLCEVLLPPDRPLRWFREQVGRS---GGKAELLVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVRTAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLTH-HPAMKLVVATHVRHFLLQPTTKQRARQAALAFLAQIPLERDWPALALVLLTTFIAALDATLASASATTK 792
            G + +  R ++  GTL DK+AA T+ +Q +PV +   L+ L+A+ + K RRE+ +A++ L+D+  + LLP +R LR F +Q   S   GG  + L+L  FED LK   A  V S   L  D+L   R  A+ +   LL+ RPE E  LL+LLV K+ D DRK+A+ AS HL+R L + HP MK+VV   V + L +P    +A+  ++ FL Q+ L +    LA+ L+T + +   + +A     TK
Sbjct:    6 GSDGEWLRTVVSSGTLGDKIAALTLQVQESPVHQVKALDLLLAMTKKKGRRESVMAIDTLKDLWLQDLLPENRKLRTFAQQPFESLAEGGGRKRLILWHFEDLLKARYAEFVSSFERLLGDSLPEIRNKALGSIYDLLSERPEQEQFLLRLLVNKVGDPDRKIASKAS-HLIRCLVNKHPNMKMVVTQAVEYLLYRPNIGVKAQYYSICFLNQMVLGQQDTELAIKLITIYFSFFKSFVAKGEVETK 251          
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Match: UPI001EAFC625 (CCAAT/enhancer-binding protein zeta-like n=3 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFC625)

HSP 1 Score: 134 bits (337), Expect = 6.060e-32
Identity = 85/222 (38.29%), Postives = 124/222 (55.86%), Query Frame = 1
Query:   70 EVKMHRALLREGTLSDKVAARTVLLQSAPVQEGGHLEGLVALGRSKARREATLAVEALRDVLCEVLLPPDRPLRWFREQV------GRSGGKA---ELLVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVRTAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLTHHPAMKLVVATHVRHFLLQPTTKQRARQAALAFLAQIPLERD 708
            + K  + +L  GTLSDK+AA T+L   +PV     +E LV + + K +REA  AV+ALRD+    LLP  R L+ F +Q         SG K    ++L+L  FED+LK   A  ++++  ++ D L  P+Q A+ T   LL S+PE E  LL ++  KL D D K+AA AS  L ++++ HP M  VV   V   L +P    RA+  A+ FL QI L+ +
Sbjct:  232 DTKWMKTVLASGTLSDKMAALTLLAGESPVHNLTSMESLVNMAKKKGKREAMAAVDALRDLFLSDLLPSHRKLKSFHQQSLPGLERFASGNKDTIDKILMLWRFEDQLKEKYAAFIKAVDTMSHDILTAPKQKALSTIYQLLTSKPEGEKELLPMMANKLGDPDYKIAAKASHLLTKLVSQHPNMNAVVVNAVEVILYRPNISARAQYYAMCFLNQIVLDAE 453          
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Match: UPI00138FB035 (CCAAT/enhancer-binding protein zeta n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FB035)

HSP 1 Score: 134 bits (336), Expect = 8.000e-32
Identity = 93/247 (37.65%), Postives = 142/247 (57.49%), Query Frame = 1
Query:   64 GGEVKMHRALLREGTLSDKVAARTVLLQSAPVQEGGHLEGLVALGRSKARREATLAVEALRDVLCEVLLPPDRPLRWFREQVGRS---GGKAELLVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVRTAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLTH-HPAMKLVVATHVRHFLLQPTTKQRARQAALAFLAQIPLERDWPALALVLLTTFIAALDATLASASATTK 792
            G + +  R ++  GTL DK+AA T+ +Q +PV +   L+ L+A+ + K RRE+ +A++ L+D+  + LLP +R LR F +Q   S   GG  + L+L  FED LK   A  V S   L  D+L   R  A+ +   LL+ RPE E  LL+LLV K+ D DRK+A+ AS HL+R L + HP MK+VV   V + L +P    +A+  ++ FL Q+ L +    LA+ L+T + +   + +A     TK
Sbjct:  209 GSDGEWLRTVVSSGTLGDKIAALTLQVQESPVHQVKALDLLLAMTKKKGRRESVMAIDTLKDLWLQDLLPENRKLRTFAQQPFESLAEGGGRKRLILWHFEDLLKARYAEFVSSFERLLGDSLPEIRNKALGSIYDLLSERPEQEQFLLRLLVNKVGDPDRKIASKAS-HLIRCLVNKHPNMKMVVTQAVEYLLYRPNIGVKAQYYSICFLNQMVLGQQDTELAIKLITIYFSFFKSFVAKGEVETK 454          
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Match: A0A4D9CW61_9STRA (CBF domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW61_9STRA)

HSP 1 Score: 134 bits (336), Expect = 8.210e-32
Identity = 96/236 (40.68%), Postives = 136/236 (57.63%), Query Frame = 1
Query:   91 LLREGTLSDKVAARTVLLQSAPVQEGGHLEGLVALGRSKARREATLAVEALRDVLCEVLLPPDRPL-RWFREQ--------VGRSGGKAE---LLVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVRTAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLTHHPAMKLVVATHVRHFLLQPTTKQRARQAALAFLAQIPLERDWPA-LALVLLTTFIAALD 759
            +LR+GTLSDKVAA T+L+Q AP+     L+ L+AL +   RR A +A+EAL+D+L   LLPP+R L  W R+          G S  +A     L L  FED+LK+ +A  +  L     DT+   ++ A+   A LL  RPE E  LL +LV KL D ++KVA  A+  L R+L  HPAMK+VVA  V+ FL +P  + R     ++FL Q+ L +     LAL L+ T+++  D
Sbjct:  161 ILRQGTLSDKVAALTLLVQEAPLFRLRTLDALLALAQKADRRCAQMAIEALQDLLEHNLLPPERKLVPWARQDEASLPPAAAGDSEQRARREACLALRFFEDQLKQRVAVLIDRLEKATHDTVTSFKRFALTGVAGLLQGRPEQEERLLSILVNKLGDVEKKVAPHAAYLLRRLLAAHPAMKVVVAREVQQFLHRPNLQPRPLYNGISFLGQLYLRKGSDTDLALGLVQTYLSLFD 396          
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Match: A0A507E002_9FUNG (CBF domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E002_9FUNG)

HSP 1 Score: 134 bits (336), Expect = 8.640e-32
Identity = 85/204 (41.67%), Postives = 122/204 (59.80%), Query Frame = 1
Query:   91 LLREGTLSDKVAARTVLLQSAPVQEGGHLEGLVALG--RSKARREATLAVEALRDVLCEVLLPPDRPLRWFREQVGRSGG-KAELLVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVRTAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLTHHPAMKLVVATHVRHFLLQPTTKQRARQAALAFLAQI 693
            +L+ GT++DKV+A T+L+Q +P+    HL   +  G  R KARREA +A+++++D+L   LLP DR LR+FR+Q  +S   K   LV   FED LK++    ++ +  LA D L   +   ++    LL ++PE E  LL LL  KL DQDRK+A+ ++  L R+L  HP MKLVV   V   L +P    RAR  A+ FL QI
Sbjct:  383 VLKSGTVTDKVSALTLLVQESPLHTLAHLRDQLVNGMARKKARREAVMAIDSVKDLLLGTLLP-DRKLRYFRDQPLQSKDVKPVHLVSWYFEDGLKKTYYEFIKLIEELARDPLLHVKNKMIQYIFDLLVAKPEQEQNLLALLTNKLGDQDRKLASKSAHLLSRLLLQHPVMKLVVIKEVERLLFRPNISDRARYYAITFLNQI 585          
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Match: A0A0L0SWV6_ALLM3 (CBF domain-containing protein (Fragment) n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SWV6_ALLM3)

HSP 1 Score: 133 bits (335), Expect = 1.060e-31
Identity = 98/251 (39.04%), Postives = 139/251 (55.38%), Query Frame = 1
Query:   19 LERERAAYLSQSAEAGGEVKMHRALLREGTLSDKVAARTVLLQSAPVQEGGHLEGLVALGRSKARREATLAVEALRDVLCEV---------LLPPDRPLRWFREQVGRSGGKAEL-LVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVRTAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLT--HHPAMKLVVATHVRHFLLQPTTKQRARQAALAFLAQIPLERDWPALALVLL 735
            L++E   + +    A G+    R +L  GT++D+++A T+L+Q++P+     LE L A+ + K RR ATLA++AL+D+L            LLP DR L++F + +       +  LV+ AFEDRLKR     +  L     DTL   R     T   LL +RPE E  LL+LLV KL D +RK+AA AS +LL  LT  HHPAMKLVV   +  F+++P    RA   A+  L Q+ L  D  A AL L+
Sbjct:   84 LKQEGIRFANDRTRAAGDASFMRTILSGGTMTDRISALTLLVQASPLHNLLALEQLFAMAKKKNRRLATLAIDALKDLLTGGGLISSSTGGLLPADRKLKYFIDSLADVPVPTDAHLVVFAFEDRLKRLYFELLGVLEQQTHDTLVHVRSKTTATLLDLLVARPEQEQNLLKLLVNKLGDLERKIAAKAS-YLLHQLTTEHHPAMKLVVVKALEEFMMRPHMTPRAHYFAVITLNQLMLSDDDKATALYLI 333          
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Match: A0A5D6XXB7_9STRA (CBF domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXB7_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.760e-31
Identity = 89/236 (37.71%), Postives = 131/236 (55.51%), Query Frame = 1
Query:    7 AERALERERAAYLSQ-SAEAGGEVKMHRALLREGTLSDKVAARTVLLQSAPVQEGGHLEGLVALGRSKARREATLAVEALRDVLCEVLLPPDRPLRWFREQ-VGRSGGKAELLVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVRTAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLTHHPAMKLVVATHVRHFLLQPTTKQRARQAALAFLAQIPLERD 708
            A+R LE E A + +Q SA    + K    ++R GTL+D+VAA T+ +QSAP      L  L+ +   KARRE+ +AV++L+D+    LLP DR LR+F +  +       E   L  FE  LK + A  V  L +   D +   ++  +R A++LLA++PE E  LL +LV KL D DRK+A+   + L  +L  HPAMK VV   V   L +P    R +  A+ FL Q+ L++ 
Sbjct:  127 AQRLLEAEVARFEAQKSARLSSDDKYLATMMRSGTLADRVAALTLTVQSAPFHNLARLSQLITMASKKARRESMMAVDSLKDLFINNLLPDDRRLRFFHQHALAHPDATDEHRALWFFEHCLKTAFAQLVGVLASGMDDAVDNHKRACIRAASALLAAKPEQEAVLLAMLVNKLGDPDRKIASYVLKTLQELLQEHPAMKRVVVDEVERVLTRPQVSDRTKYNAILFLNQMYLDKS 362          
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Match: A0A507D2S8_9FUNG (CBF domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D2S8_9FUNG)

HSP 1 Score: 132 bits (332), Expect = 2.850e-31
Identity = 82/206 (39.81%), Postives = 126/206 (61.17%), Query Frame = 1
Query:   91 LLREGTLSDKVAARTVLLQSAPVQEGGHLEG--LVALGRSKARREATLAVEALRDVLCEVLLPPDRPLRWFREQVGRSGGKAEL-LVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVRTAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLTHHPAMKLVVATHVRHFLLQPTTKQRARQAALAFLAQIPL 699
            +L+ GT++DKV+A T+L+Q AP+    HL+   L  + + K++REA LA++++RD++  +LLP DR LR+FR+Q        +  L++  FED LK+     +++L  L  D +   +  A+   + LLA++PE E  LL LLV KL D DRKVAA A  HL ++L+ HP MK++V    +  L +P    RA+  +L FL QI L
Sbjct:  266 VLKSGTVTDKVSALTILVQEAPLYSLKHLKEDLLEGMAKKKSKREAILAIDSIRDLMMSLLLP-DRKLRYFRDQPLEDPKVTDAHLLVWYFEDTLKKIYFELIKTLEVLIHDPVLNVKTRALTYISDLLAAKPEQEQNLLLLLVNKLGDADRKVAAKAVHHLTQLLSAHPNMKMIVIKEAQQLLFRPKASPRAQYISLTFLNQIVL 470          
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Match: A0A6P4ZNA0_BRABE (CCAAT/enhancer-binding protein zeta-like n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZNA0_BRABE)

HSP 1 Score: 132 bits (331), Expect = 3.820e-31
Identity = 82/223 (36.77%), Postives = 129/223 (57.85%), Query Frame = 1
Query:  103 GTLSDKVAARTVLLQSAPVQEGGHLEGLVALGRSKARREATLAVEALRDVLCEVLLPPDRPLRWFREQV---------GRSGGKAELLVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVRTAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLTHHPAMKLVVATHVRHFLLQPTTKQRARQAALAFLAQIPLERDWPALALVLLTTF 744
            GTL+D+VA  TVL+Q AP+     L+ LV++ + K RREAT AV+ L+++    LLP DR L+ F +           G   G+   L++  +EDR+K+  A  + ++  LA DT+   +  A+ T   LL+++PE E  LL+LLV K+ D D K+A+ A+  L +++T HP M+LVV   V   L +P    +A+  ++ FL Q+ L+ D   LA  L+T +
Sbjct:  219 GTLADRVAGLTVLIQDAPLHNLASLDTLVSMAKKKMRREATQAVDTLKELWLSDLLP-DRKLKTFEQHPLSVLPEITGGNQEGRRRRLIMWYYEDRVKQLYAEFISAIQTLAHDTVETNKSKALGTVLELLSNKPEQEKVLLELLVNKVGDPDYKIASKAAHLLGKLVTIHPNMRLVVVREVERLLYRPNVSDKAQYYSMCFLNQLVLDHDSSELANKLVTIY 440          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88421.20538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y2HZ83_9FUNG1.750e-3441.49CBF/Mak21 family-domain-containing protein n=1 Tax... [more]
A7SXN8_NEMVE1.930e-3237.65Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]
UPI001EAFC6256.060e-3238.29CCAAT/enhancer-binding protein zeta-like n=3 Tax=H... [more]
UPI00138FB0358.000e-3237.65CCAAT/enhancer-binding protein zeta n=1 Tax=Nemato... [more]
A0A4D9CW61_9STRA8.210e-3240.68CBF domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A507E002_9FUNG8.640e-3241.67CBF domain-containing protein n=1 Tax=Powellomyces... [more]
A0A0L0SWV6_ALLM31.060e-3139.04CBF domain-containing protein (Fragment) n=2 Tax=A... [more]
A0A5D6XXB7_9STRA2.760e-3137.71CBF domain-containing protein n=1 Tax=Pythium bras... [more]
A0A507D2S8_9FUNG2.850e-3139.81CBF domain-containing protein n=1 Tax=Synchytrium ... [more]
A0A6P4ZNA0_BRABE3.820e-3136.77CCAAT/enhancer-binding protein zeta-like n=4 Tax=B... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88421contigM-pyrifera_M_contig88421:1..792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score136.3
Seed ortholog evalue2e-29
Seed eggNOG ortholog45351.EDO31525
Preferred nameCEBPZ
KEGG koko:K14832
Hectar predicted targeting categoryother localisation
GOsGO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001077,GO:0001228,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141
EggNOG free text desc.proximal promoter DNA-binding transcription activator activity, RNA polymerase II-specific
EggNOG OGs38CDC@33154,3BH9K@33208,COG5593@1,KOG2038@2759
COG Functional cat.JK
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons1
Model size792
Cds size792
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816794.323576-CDS-M-pyrifera_M_contig88421:0..7921622816794.323576-CDS-M-pyrifera_M_contig88421:0..792Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88421 1..792 +
1692278182.399819-CDS-M-pyrifera_M_contig88421:0..7921692278182.399819-CDS-M-pyrifera_M_contig88421:0..792Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88421 1..792 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88421.20538.1prot_M-pyrifera_M_contig88421.20538.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88421 1..792 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88421.20538.1

>prot_M-pyrifera_M_contig88421.20538.1 ID=prot_M-pyrifera_M_contig88421.20538.1|Name=mRNA_M-pyrifera_M_contig88421.20538.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=264bp
QAAERALERERAAYLSQSAEAGGEVKMHRALLREGTLSDKVAARTVLLQS
APVQEGGHLEGLVALGRSKARREATLAVEALRDVLCEVLLPPDRPLRWFR
EQVGRSGGKAELLVLMAFEDRLKRSMATAVQSLHALASDTLAWPRQVAVR
TAASLLASRPEAELPLLQLLVGKLADQDRKVAASASQHLLRVLTHHPAMK
LVVATHVRHFLLQPTTKQRARQAALAFLAQIPLERDWPALALVLLTTFIA
ALDATLASASATTK
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mRNA from alignment at M-pyrifera_M_contig88421:1..792+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88421.20538.1 ID=mRNA_M-pyrifera_M_contig88421.20538.1|Name=mRNA_M-pyrifera_M_contig88421.20538.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig88421:1..792+ (Macrocystis pyrifera P11B4 male)
CAGGCGGCAGAACGTGCGCTGGAGCGAGAAAGAGCGGCGTATTTGTCACA GAGCGCCGAAGCAGGGGGGGAGGTGAAGATGCACCGTGCGCTGTTGCGAG AAGGGACCTTGTCGGACAAAGTTGCGGCAAGAACGGTGTTGTTGCAGAGC GCACCCGTGCAAGAAGGGGGTCACTTGGAAGGGTTGGTGGCTTTGGGTCG GAGTAAAGCGAGGAGGGAGGCGACCTTGGCTGTGGAAGCCCTGCGGGATG TGCTGTGTGAGGTGCTCTTGCCCCCAGACAGGCCTCTGCGCTGGTTCCGG GAGCAGGTGGGTCGGAGTGGTGGAAAAGCGGAGCTGCTGGTGCTCATGGC GTTTGAAGACCGACTCAAACGGAGCATGGCGACTGCAGTGCAATCCCTGC ACGCGTTGGCCAGTGATACGCTCGCGTGGCCCCGGCAAGTGGCTGTGCGC ACCGCTGCCTCCCTCCTTGCGTCCCGACCAGAGGCGGAATTGCCGCTATT GCAGTTGCTCGTGGGAAAATTGGCCGACCAGGACAGGAAAGTCGCTGCAA GCGCTTCCCAGCACCTGCTCCGCGTCCTAACCCACCACCCGGCCATGAAG CTCGTGGTCGCGACGCACGTGCGCCACTTCCTCCTCCAGCCCACCACCAA ACAGCGAGCGCGCCAAGCTGCCCTCGCATTTCTCGCCCAAATTCCCCTCG AACGAGACTGGCCCGCACTCGCCCTCGTCCTCCTCACCACATTCATCGCG GCGCTGGATGCCACACTCGCGTCTGCGTCCGCAACCACCAAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88421:1..792+

>mRNA_M-pyrifera_M_contig88421.20538.1 ID=mRNA_M-pyrifera_M_contig88421.20538.1|Name=mRNA_M-pyrifera_M_contig88421.20538.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1584bp|location=Sequence derived from alignment at M-pyrifera_M_contig88421:1..792+ (Macrocystis pyrifera P11B4 male)
CAGGCGGCAGAACGTGCGCTGGAGCGAGAAAGAGCGGCGTATTTGTCACA
GAGCGCCGAAGCAGGGGGGGAGGTGAAGATGCACCGTGCGCTGTTGCGAG
AAGGGACCTTGTCGGACAAAGTTGCGGCAAGAACGGTGTTGTTGCAGAGC
GCACCCGTGCAAGAAGGGGGTCACTTGGAAGGGTTGGTGGCTTTGGGTCG
GAGTAAAGCGAGGAGGGAGGCGACCTTGGCTGTGGAAGCCCTGCGGGATG
TGCTGTGTGAGGTGCTCTTGCCCCCAGACAGGCCTCTGCGCTGGTTCCGG
GAGCAGGTGGGTCGGAGTGGTGGAAAAGCGGAGCTGCTGGTGCTCATGGC
GTTTGAAGACCGACTCAAACGGAGCATGGCGACTGCAGTGCAATCCCTGC
ACGCGTTGGCCAGTGATACGCTCGCGTGGCCCCGGCAAGTGGCTGTGCGC
ACCGCTGCCTCCCTCCTTGCGTCCCGACCAGAGGCGGAATTGCCGCTATT
GCAGTTGCTCGTGGGAAAATTGGCCGACCAGGACAGGAAAGTCGCTGCAA
GCGCTTCCCAGCACCTGCTCCGCGTCCTAACCCACCACCCGGCCATGAAG
CTCGTGGTCGCGACGCACGTGCGCCACTTCCTCCTCCAGCCCACCACCAA
ACAGCGAGCGCGCCAAGCTGCCCTCGCATTTCTCGCCCAAATTCCCCTCG
AACGAGACTGGCCCGCACTCGCCCTCGTCCTCCTCACCACATTCATCGCG
GCGCTGGATGCCACACTCGCGTCTGCGTCCGCAACCACCAAACAGGCGGC
AGAACGTGCGCTGGAGCGAGAAAGAGCGGCGTATTTGTCACAGAGCGCCG
AAGCAGGGGGGGAGGTGAAGATGCACCGTGCGCTGTTGCGAGAAGGGACC
TTGTCGGACAAAGTTGCGGCAAGAACGGTGTTGTTGCAGAGCGCACCCGT
GCAAGAAGGGGGTCACTTGGAAGGGTTGGTGGCTTTGGGTCGGAGTAAAG
CGAGGAGGGAGGCGACCTTGGCTGTGGAAGCCCTGCGGGATGTGCTGTGT
GAGGTGCTCTTGCCCCCAGACAGGCCTCTGCGCTGGTTCCGGGAGCAGGT
GGGTCGGAGTGGTGGAAAAGCGGAGCTGCTGGTGCTCATGGCGTTTGAAG
ACCGACTCAAACGGAGCATGGCGACTGCAGTGCAATCCCTGCACGCGTTG
GCCAGTGATACGCTCGCGTGGCCCCGGCAAGTGGCTGTGCGCACCGCTGC
CTCCCTCCTTGCGTCCCGACCAGAGGCGGAATTGCCGCTATTGCAGTTGC
TCGTGGGAAAATTGGCCGACCAGGACAGGAAAGTCGCTGCAAGCGCTTCC
CAGCACCTGCTCCGCGTCCTAACCCACCACCCGGCCATGAAGCTCGTGGT
CGCGACGCACGTGCGCCACTTCCTCCTCCAGCCCACCACCAAACAGCGAG
CGCGCCAAGCTGCCCTCGCATTTCTCGCCCAAATTCCCCTCGAACGAGAC
TGGCCCGCACTCGCCCTCGTCCTCCTCACCACATTCATCGCGGCGCTGGA
TGCCACACTCGCGTCTGCGTCCGCAACCACCAAA
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