mRNA_M-pyrifera_M_contig88409.20532.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88409.20532.1
Unique NamemRNA_M-pyrifera_M_contig88409.20532.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Match: A0A6J5WAX7_PRUAR (Uncharacterized protein n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5WAX7_PRUAR)

HSP 1 Score: 215 bits (548), Expect = 1.220e-61
Identity = 127/271 (46.86%), Postives = 166/271 (61.25%), Query Frame = 1
Query:    1 KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAATVNKGETARVDFGDTFISAEHAMSCFPGKVVEVKGPGGEAGEDLDRRPPPRALLASTEAAGAEAAIRSVRSTKGGVGRTAWLWSAAVGPSSVSLEARAPPLPSPSPDCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLYRSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGEDFSRSGRVDAVLERRLRLLGDV 813
            KENNF+A+L + RD +   N    +P+W  +  LGYG+P+AA  T   G    VDF DTF+ AEH   CFP   V    P G   E+L+ RPP R  L  T  +   A   + +ST         + ++ +    + +EA  PP P P P   P  N VRFTPTQ  A+ +G+  GLT++VGPPGTGKTD AVQI+  LY +   +R L++THSNQALNDLF KI +R +PAR+LLRLG+GE+EL    DFSR GRV+A+L RRL LL +V
Sbjct:  285 KENNFKAILESIRDLM---NEYCIVPDWLHNIFLGYGNPSAAQWTNMPGLLGTVDFKDTFLDAEHLKECFPDDQVCFISPDGT--ENLNPRPPFRIRLPKTIKSSTNALPGNKKSTDSI--SDVPVKNSDIEKEKIVVEAYTPPDPGPYPQDQPKKNSVRFTPTQVGAIISGIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELATDLDFSRQGRVNAMLVRRLELLSEV 548          
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Match: A0A7S0RUI6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RUI6_9CHLO)

HSP 1 Score: 219 bits (557), Expect = 3.150e-61
Identity = 128/271 (47.23%), Postives = 159/271 (58.67%), Query Frame = 1
Query:    1 KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAATVNKGETARVDFGDTFISAEHAMSCFPGKVVEVKGPGGEAGEDLDRRPPPRALLASTEAAGAEAAIRSVRSTKGGVGRTAWLWSAAVGPSSVSLEARAPPLPSPSPDCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLYRSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGEDFSRSGRVDAVLERRLRLLGDV 813
            KENNF+A+L   RD +   N   A+PEW  D  LGYGDP AA  +    + + + F DTF+S +H    FP   VE  G G EA      +PP +    +      E      RS KG          A   P  + +E+   P P P P   P  N V FTPTQ  A+RAG++ GLT++VGPPGTGKTDVAVQI+  LY +   ER LL+THSN ALNDLF KI  R IPAR+LLRLG GE+EL+   DFSR+GRV+A+L RRL LL +V
Sbjct:  713 KENNFKAILECIRDLM---NEECAIPEWLHDIFLGYGDPAAAHYSNMPDQLSTITFKDTFLSKDHLEEAFPEFTVEYVGAGAEA-----PKPPFKVTFPAPPPPAEEPVAGKKRSKKGQEPEAEPAEEAKAEPQVLKVESVPHPDPGPYPQDNPRINTVHFTPTQVSAIRAGVNPGLTMVVGPPGTGKTDVAVQIMHELYHNRPQERTLLITHSNHALNDLFQKIMERDIPARYLLRLGMGEQELDTDIDFSRAGRVNAMLARRLELLAEV 975          
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Match: A0A2R6W2Z3_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W2Z3_MARPO)

HSP 1 Score: 219 bits (557), Expect = 3.200e-61
Identity = 134/278 (48.20%), Postives = 168/278 (60.43%), Query Frame = 1
Query:    1 KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAATVNKGETARVDFGDTFISAEHAMSCFPGKVVEVKGPGGEAGEDLDRRPPPRA-LLASTEAAGAEAAIRSVRSTKGGVGRTAWLWSAAVGPSSVS------LEARAPPLPSPSPDCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLYRSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGEDFSRSGRVDAVLERRLRLLGDV 813
            KENNF+A+L + RD +   N    +PEW  D  LGYGDP AA       +   VDF DTFI A H +  FP   V+   P GE  ED D RPP R  L+ +++ AGA+A     R   G  G      + +  P S+S      +E   PP P P P   P  N VRFTP Q  A+ +G+  GLT++VGPPGTGKTD AVQI+  LY +   +R LL+THSNQALNDLF KI +R +PAR+LLRLG+GE+EL    DFSR GRV+A+L RRL LL +V
Sbjct:  724 KENNFKAILESIRDLM---NEDCFVPEWLHDIFLGYGDPAAAQWHNMPQQLDVVDFKDTFIDANHLVESFPSSEVQFLTPDGE--EDKDPRPPFRVTLMKASKPAGAKAKAGG-RKRNGAEGE-----NVSKVPESISEKPKILVETYVPPDPGPYPQDQPKKNSVRFTPVQVGAIISGVQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLLITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELETELDFSRQGRVNAMLSRRLELLAEV 990          
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Match: A0A251QAA0_PRUPE (Uncharacterized protein n=9 Tax=Prunus TaxID=3754 RepID=A0A251QAA0_PRUPE)

HSP 1 Score: 217 bits (552), Expect = 1.370e-60
Identity = 130/279 (46.59%), Postives = 166/279 (59.50%), Query Frame = 1
Query:    1 KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAATVNKGETARVDFGDTFISAEHAMSCFPGKVVEVKGPGGEAGEDLDRRPPPRALLASTEAAGAEAAIRSVRSTKGGVGRTAWLWSAAVGP--------SSVSLEARAPPLPSPSPDCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLYRSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGEDFSRSGRVDAVLERRLRLLGDV 813
            KENNF+A+L + RD +   N    +P+W  +  LGYG+P+AA  T   G  A VDF DTF+ AEH   CFP   V    P G   E+L+  PP R  L  T  +   A   + +ST           S + GP          + +EA  PP P P P   P  N VRFTPTQ  A+ +G+  GLT++VGPPGTGKTD AVQI+  LY +   +R L++THSNQALNDLF KI +R +PAR+LLRLG+GE+EL    DFSR GRV+A+L RRL LL +V
Sbjct:  430 KENNFKAILESIRDLM---NEYCIVPDWLHNIFLGYGNPSAAQWTNMPGLLATVDFKDTFLDAEHLKECFPDDQVSFISPDGT--ENLNPSPPFRIRLPKTIKSSTNALPGNKKSTD----------SISDGPVKNSDIEKEKIVVEAYTPPDPGPYPQDQPKKNSVRFTPTQVGAIISGIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELATDLDFSRQGRVNAMLVRRLELLSEV 693          
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Match: A0A1Y1HSV8_KLENI (Intron-binding protein aquarius n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSV8_KLENI)

HSP 1 Score: 216 bits (551), Expect = 2.020e-60
Identity = 128/280 (45.71%), Postives = 165/280 (58.93%), Query Frame = 1
Query:    1 KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAAT--VNKGETARVDFGDTFISAEHAMSCFPGKVVEVKGPGGEAGEDLDRRPPPRALLASTEAAGAEAAIRSVRSTKGGVGRTAWLWSAAVGPSSVSLEAR-------APPLPSPSPDCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLYRSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGEDFSRSGRVDAVLERRLRLLGDV 813
            KENNF+A+L   RD + + N    +PEW R+  LGYGDP AA       K +   +DF DTF+SA+H    FPG  V   G   E   D + +PP R      +   +   I+     KG  G  A   SA     +  LEA         PP P P P   P  N VRFTP Q EA+++G++ GLT++VGPPGTGKTD AVQI+  LY +   +R LL+THSNQALNDLF KI +R +PAR+LLRLG GE+EL   ++FSR GRV+A+L RR+ LL +V
Sbjct:  734 KENNFKAILECIRDLMNENNI---VPEWLREIFLGYGDPAAAQYQNLPEKEQLRTIDFKDTFLSADHLRESFPGSDVRFVGQDNEP--DTEPKPPFRVTFPPRKEESSTPVIKPPAKRKGVDGEVANGGSAMEVDGAKQLEAEPILAQSYVPPDPGPYPQNQPRQNSVRFTPVQVEAIKSGVNPGLTMVVGPPGTGKTDTAVQILNVLYHNCPGQRTLLITHSNQALNDLFEKIMQRDVPARYLLRLGMGEKELESEQNFSRQGRVNAMLARRIELLAEV 1008          
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Match: A0A061S883_9CHLO (Intron-binding protein aquarius (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S883_9CHLO)

HSP 1 Score: 215 bits (547), Expect = 6.790e-60
Identity = 124/271 (45.76%), Postives = 165/271 (60.89%), Query Frame = 1
Query:    1 KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAATVNKGETARVDFGDTFISAEHAMSCFPGKVVEVKGPGGEAGEDLDRRPPPRALLASTEAAGAEAAIRSVRSTKGGVGRTAWLWSAAVGPSSVSLEARAPPLPSPSPDCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLYRSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGEDFSRSGRVDAVLERRLRLLGDV 813
            KENNF+AVL + RD + +  +   LP W  D  LGYGDP AA      G+T  VDF DTF+  EH  + FPG  +++        +  +  PP R          +E A+   +  +     T   WS       + +E+  PP P P P   P  N VRFTP Q EA+ +G+  GL+++VGPPGTGKTDVAVQI+  LY ++  +R LL+THSNQALNDLF+KI  R IPAR+LLRLG+GE++L+   DFSR GRV+A+LERRL+LL +V
Sbjct:  585 KENNFKAVLESIRDLMNEPEAS--LPPWLHDIFLGYGDPAAAHYLSMDGKTPTVDFKDTFLDYEHLKASFPGNDIKLVNNS----DKYEPVPPFRITFPWGSELKSEVAVDGKKRNREEALSTLPRWS-----EPLIVESYTPPNPGPYPQDQPRKNSVRFTPVQVEAILSGVQPGLSMVVGPPGTGKTDVAVQIMNVLYHTNPDQRTLLITHSNQALNDLFTKIMERDIPARYLLRLGQGEQDLDTELDFSRVGRVNAMLERRLQLLAEV 844          
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Match: A0A2V0PB46_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PB46_9CHLO)

HSP 1 Score: 213 bits (543), Expect = 1.680e-59
Identity = 130/282 (46.10%), Postives = 165/282 (58.51%), Query Frame = 1
Query:    1 KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAATVNKGETARVDFGDTFISAEHAMSCFPGKVVEVKGPGGEAGEDLDRRPPP---RALLASTEAAGA------EAAIRSVRSTKGGVGRTAWLWSAAVGPSSVSL--EARAPPLPSPSPDCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLYRSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGEDFSRSGRVDAVLERRLRLLGDV 813
            KENNF+AVL + RD +   N   A+P W  D  LGYGDP AA  +  +G    VDF DTF+   H +  FP   V +K  GG          PP   RA    +   GA      +AA+    +  G             G     L  E  AP  P P P   PP N VRFTP Q EA+R+G+  GLT++VGPPGTGKTD AVQI++ L+ +   +R LL+THSNQALNDLF+KIA R +PAR+LLRLG GER+L++ +DFSR+GRV+A+L RRL LL +V
Sbjct:  247 KENNFKAVLESIRDLL---NEAAAIPPWLADIFLGYGDPAAAHYSNMEGTLPTVDFRDTFLDYRHLVESFPQYEVRLKDAGGTPPPPYRLTFPPADHRAAAPGSTKTGATSKEARDAAVAGGGAPDGSXXXXXXXXXXXXGTEKPVLLVEPYAPENPGPYPRDQPPRNGVRFTPVQVEAIRSGVQPGLTMVVGPPGTGKTDTAVQIMSVLHANCPGQRTLLITHSNQALNDLFTKIADRDVPARYLLRLGMGERDLDVDDDFSRTGRVNAMLARRLLLLAEV 525          
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Match: A0A8J4B3V0_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4B3V0_9CHLO)

HSP 1 Score: 214 bits (544), Expect = 1.790e-59
Identity = 138/300 (46.00%), Postives = 170/300 (56.67%), Query Frame = 1
Query:    1 KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAATVNK--------------GETA--RVDFGDTFISAEHAMSCFPG-KVVEVKGPGGEAGEDLDRRPPPRALLASTE----AAGAEAAIRSVRSTK------GGVGRTAWLWSAAVG--PSSVSLEARAPPLPSPSPDCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLYRSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGEDFSRSGRVDAVLERRLRLLGDV 813
            KENNF+AVL + RD + D  +   +P W  D  LGYGDP AA A V                GET    VDFGDTF+ AEH +  FP  KV  V   GG       R   P     +TE    A+G ++   +   T       GG      + +AA G  P  + +E+  PP P P P   P  N VRFTP Q EA+ AG+  GLT++VGPPGTGKTD AVQI+  LY +   +R LL+THSNQALNDLFSKI  R +P R+LLRLG GE EL+  +DFSR GRV+A+L RRL LL +V
Sbjct:  985 KENNFKAVLESIRDLMNDETA--VIPPWLHDVFLGYGDPAAAQARVPGTAVAAAEDDAGGVGGETPLRTVDFGDTFLDAEHVVEAFPQFKVNFVNRSGGPKPVPPFRVTFPSEAALATEGAPSASGTDSTAAATAGTSVXXXXXGGADXXXXVATAAAGASPGELLVESYVPPDPGPYPQDQPRRNAVRFTPIQVEAIAAGVQPGLTMVVGPPGTGKTDTAVQIMTVLYHNCPGQRTLLITHSNQALNDLFSKIMERDVPERYLLRLGMGEAELDTEQDFSRVGRVNAMLARRLELLAEV 1282          
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Match: A0A498KHQ7_MALDO (Uncharacterized protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498KHQ7_MALDO)

HSP 1 Score: 213 bits (541), Expect = 3.160e-59
Identity = 127/278 (45.68%), Postives = 169/278 (60.79%), Query Frame = 1
Query:    1 KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAATVNKGETARVDFGDTFISAEHAMSCFPGKVVEVKGPGGEAGEDLDRRPPPRALLASTEAAGAEAAIRSVRSTKGGVGRTAWLWSAAVGPSS-------VSLEARAPPLPSPSPDCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLYRSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGEDFSRSGRVDAVLERRLRLLGDV 813
            KENNF+A+L + RD +   N    +P+W  +  LGYG+P+AA  T        VDF DTF+ A+H   CFP   V    P G   E+LD RPP R  L  T        IRS  +   G  +++ +  + V   +       +++EA  PP P P P   P  N V+FTPTQ  A+ +G+  GLT++VGPPGTGKTD AVQI+  LY + + +R L++THSNQALNDLF KI +R +PAR+LLRLG+GE+EL    DFSR GRV+A+L RRL LL +V
Sbjct:  263 KENNFKAILESIRDLM---NEYCIVPDWLHNIFLGYGNPSAAQWTNMPDLLETVDFKDTFLDADHLKECFPDDQVCFTSPDGT--ENLDPRPPFRIKLPKT--------IRSSTNALPGNKKSSIVSMSDVPMENSDSEKEKIAVEAYTPPDPGPYPQDQPRKNTVKFTPTQVGAIISGIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCSSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELATDLDFSRQGRVNAMLVRRLELLSEV 527          
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Match: A0A8K0DZY7_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0DZY7_9ROSA)

HSP 1 Score: 213 bits (542), Expect = 3.240e-59
Identity = 129/272 (47.43%), Postives = 166/272 (61.03%), Query Frame = 1
Query:    1 KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAATVNKGETARVDFGDTFISAEHAMSCFPGKVVEVKGPGGEAGEDLDRRPPPRALLASTEAAGAEAAIRSVRST-KGGVGRTAWLWSAAVGPSSVSLEARAPPLPSPSPDCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLYRSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGEDFSRSGRVDAVLERRLRLLGDV 813
            KENNF+A+L + RD +   N    +P+W  +  LGYG+P+AA  T        VDF DTF+ A+H   CFP   V      G   E+LD RPP R  L     + A A   + +ST +  V  T    +A      + +EA  PP P P P   P  N VRFTPTQT A+ +G+  GLT++VGPPGTGKTD AVQI+  LY +   +R L++THSNQALNDLF KI +R +PAR+LLRLG+GE+EL    DFSR GRV+A+L RRL LL +V
Sbjct:  713 KENNFKAILESIRDLM---NEYCIVPDWLHNIFLGYGNPSAAQWTNMPDLLETVDFKDTFLDADHLKECFPDYQVCFTNSDGT--ENLDPRPPFRIRLPKMLKSNAHALPGNKKSTTENDVSMT----NAGSEKEQLIVEAYTPPDPGPYPQDQPRQNSVRFTPTQTGAIISGIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELATDLDFSRQGRVNAMLVRRLELLSEV 975          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88409.20532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6J5WAX7_PRUAR1.220e-6146.86Uncharacterized protein n=1 Tax=Prunus armeniaca T... [more]
A0A7S0RUI6_9CHLO3.150e-6147.23Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A2R6W2Z3_MARPO3.200e-6148.20Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A251QAA0_PRUPE1.370e-6046.59Uncharacterized protein n=9 Tax=Prunus TaxID=3754 ... [more]
A0A1Y1HSV8_KLENI2.020e-6045.71Intron-binding protein aquarius n=1 Tax=Klebsormid... [more]
A0A061S883_9CHLO6.790e-6045.76Intron-binding protein aquarius (Fragment) n=1 Tax... [more]
A0A2V0PB46_9CHLO1.680e-5946.10Uncharacterized protein (Fragment) n=1 Tax=Raphido... [more]
A0A8J4B3V0_9CHLO1.790e-5946.00Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A498KHQ7_MALDO3.160e-5945.68Uncharacterized protein n=1 Tax=Malus domestica Ta... [more]
A0A8K0DZY7_9ROSA3.240e-5947.43Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88409contigM-pyrifera_M_contig88409:1..813 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score221.1
Seed ortholog evalue6.4e-55
Seed eggNOG ortholog3760.EMJ21780
Preferred nameAQR
KEGG koko:K12874
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Intron-binding protein
EggNOG OGs37MCQ@33090,3GDBD@35493,4JDN9@91835,KOG1806@1,KOG1806@2759
COG Functional cat.L
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons1
Model size813
Cds size813
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816794.1027007-CDS-M-pyrifera_M_contig88409:0..8131622816794.1027007-CDS-M-pyrifera_M_contig88409:0..813Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88409 1..813 -
1692278182.30957-CDS-M-pyrifera_M_contig88409:0..8131692278182.30957-CDS-M-pyrifera_M_contig88409:0..813Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88409 1..813 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88409.20532.1prot_M-pyrifera_M_contig88409.20532.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88409 1..813 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88409.20532.1

>prot_M-pyrifera_M_contig88409.20532.1 ID=prot_M-pyrifera_M_contig88409.20532.1|Name=mRNA_M-pyrifera_M_contig88409.20532.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=271bp
KENNFRAVLSAARDAIQDVNSGRALPEWARDTLLGYGDPTAAAATVNKGE
TARVDFGDTFISAEHAMSCFPGKVVEVKGPGGEAGEDLDRRPPPRALLAS
TEAAGAEAAIRSVRSTKGGVGRTAWLWSAAVGPSSVSLEARAPPLPSPSP
DCTPPSNIVRFTPTQTEAVRAGLSSGLTLIVGPPGTGKTDVAVQIVASLY
RSSAHERILLVTHSNQALNDLFSKIARRGIPARHLLRLGRGERELNIGED
FSRSGRVDAVLERRLRLLGDV
back to top

mRNA from alignment at M-pyrifera_M_contig88409:1..813-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88409.20532.1 ID=mRNA_M-pyrifera_M_contig88409.20532.1|Name=mRNA_M-pyrifera_M_contig88409.20532.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=813bp|location=Sequence derived from alignment at M-pyrifera_M_contig88409:1..813- (Macrocystis pyrifera P11B4 male)
AAGGAGAATAACTTCCGTGCAGTTCTGTCTGCTGCAAGAGATGCAATTCA GGATGTGAATTCAGGTCGAGCATTGCCAGAATGGGCACGAGACACTTTGC TTGGATATGGAGATCCGACTGCTGCTGCTGCTACAGTGAACAAGGGTGAA ACTGCACGTGTGGACTTTGGAGATACATTCATTTCAGCTGAGCATGCTAT GAGTTGTTTCCCTGGGAAAGTGGTTGAAGTGAAAGGACCTGGTGGGGAAG CAGGAGAGGATTTGGACAGACGACCTCCACCACGTGCACTCCTTGCATCT ACTGAAGCTGCAGGTGCAGAAGCAGCAATTCGATCTGTGCGTTCTACAAA AGGAGGAGTGGGTAGAACTGCTTGGTTGTGGAGTGCAGCTGTGGGTCCTT CTTCTGTGAGCCTTGAAGCACGAGCACCACCTCTTCCATCTCCATCACCT GATTGTACACCACCCAGTAATATTGTGCGCTTTACACCTACGCAAACAGA GGCAGTTCGAGCAGGACTGTCTTCTGGGTTGACATTGATTGTTGGACCAC CAGGGACTGGAAAGACTGATGTTGCTGTCCAAATTGTTGCGAGCTTGTAT CGTAGTTCTGCACATGAACGCATCCTTTTAGTAACTCATTCAAACCAGGC GTTGAATGATTTGTTTTCTAAAATTGCCCGCCGTGGGATCCCAGCAAGGC ATTTGTTGCGGTTGGGACGAGGAGAACGTGAGTTGAACATTGGTGAAGAT TTTAGTCGCAGTGGACGCGTTGATGCAGTGTTGGAACGAAGATTGAGGTT GCTTGGTGATGTA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig88409:1..813-

>mRNA_M-pyrifera_M_contig88409.20532.1 ID=mRNA_M-pyrifera_M_contig88409.20532.1|Name=mRNA_M-pyrifera_M_contig88409.20532.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1626bp|location=Sequence derived from alignment at M-pyrifera_M_contig88409:1..813- (Macrocystis pyrifera P11B4 male)
AAGGAGAATAACTTCCGTGCAGTTCTGTCTGCTGCAAGAGATGCAATTCA
GGATGTGAATTCAGGTCGAGCATTGCCAGAATGGGCACGAGACACTTTGC
TTGGATATGGAGATCCGACTGCTGCTGCTGCTACAGTGAACAAGGGTGAA
ACTGCACGTGTGGACTTTGGAGATACATTCATTTCAGCTGAGCATGCTAT
GAGTTGTTTCCCTGGGAAAGTGGTTGAAGTGAAAGGACCTGGTGGGGAAG
CAGGAGAGGATTTGGACAGACGACCTCCACCACGTGCACTCCTTGCATCT
ACTGAAGCTGCAGGTGCAGAAGCAGCAATTCGATCTGTGCGTTCTACAAA
AGGAGGAGTGGGTAGAACTGCTTGGTTGTGGAGTGCAGCTGTGGGTCCTT
CTTCTGTGAGCCTTGAAGCACGAGCACCACCTCTTCCATCTCCATCACCT
GATTGTACACCACCCAGTAATATTGTGCGCTTTACACCTACGCAAACAGA
GGCAGTTCGAGCAGGACTGTCTTCTGGGTTGACATTGATTGTTGGACCAC
CAGGGACTGGAAAGACTGATGTTGCTGTCCAAATTGTTGCGAGCTTGTAT
CGTAGTTCTGCACATGAACGCATCCTTTTAGTAACTCATTCAAACCAGGC
GTTGAATGATTTGTTTTCTAAAATTGCCCGCCGTGGGATCCCAGCAAGGC
ATTTGTTGCGGTTGGGACGAGGAGAACGTGAGTTGAACATTGGTGAAGAT
TTTAGTCGCAGTGGACGCGTTGATGCAGTGTTGGAACGAAGATTGAGGTT
GCTTGGTGATGTAAAGGAGAATAACTTCCGTGCAGTTCTGTCTGCTGCAA
GAGATGCAATTCAGGATGTGAATTCAGGTCGAGCATTGCCAGAATGGGCA
CGAGACACTTTGCTTGGATATGGAGATCCGACTGCTGCTGCTGCTACAGT
GAACAAGGGTGAAACTGCACGTGTGGACTTTGGAGATACATTCATTTCAG
CTGAGCATGCTATGAGTTGTTTCCCTGGGAAAGTGGTTGAAGTGAAAGGA
CCTGGTGGGGAAGCAGGAGAGGATTTGGACAGACGACCTCCACCACGTGC
ACTCCTTGCATCTACTGAAGCTGCAGGTGCAGAAGCAGCAATTCGATCTG
TGCGTTCTACAAAAGGAGGAGTGGGTAGAACTGCTTGGTTGTGGAGTGCA
GCTGTGGGTCCTTCTTCTGTGAGCCTTGAAGCACGAGCACCACCTCTTCC
ATCTCCATCACCTGATTGTACACCACCCAGTAATATTGTGCGCTTTACAC
CTACGCAAACAGAGGCAGTTCGAGCAGGACTGTCTTCTGGGTTGACATTG
ATTGTTGGACCACCAGGGACTGGAAAGACTGATGTTGCTGTCCAAATTGT
TGCGAGCTTGTATCGTAGTTCTGCACATGAACGCATCCTTTTAGTAACTC
ATTCAAACCAGGCGTTGAATGATTTGTTTTCTAAAATTGCCCGCCGTGGG
ATCCCAGCAAGGCATTTGTTGCGGTTGGGACGAGGAGAACGTGAGTTGAA
CATTGGTGAAGATTTTAGTCGCAGTGGACGCGTTGATGCAGTGTTGGAAC
GAAGATTGAGGTTGCTTGGTGATGTA
back to top