mRNA_M-pyrifera_M_contig88357.20524.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Match: A0A6B1EFA9_9ACTN (Iron ABC transporter permease n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EFA9_9ACTN) HSP 1 Score: 404 bits (1037), Expect = 5.350e-139 Identity = 214/269 (79.55%), Postives = 237/269 (88.10%), Query Frame = 1 Query: 10 VFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSGAAYQGAFRNPLADPYLLGIAAGAGLGATIAITEGFGDGAGVFDPVPLAAFAGGLAAVWISYLAGHIGGRSTVTLILAGVAVASFLTACQTYVLQANSDVIREVYSWILGRIATSGWDEPALLAPYFVLTLVVVLRYRRALDVLAVGDEEAAALGVDPRRVRLVVVLAASLGAAAAVAVSGLIGFVGIIVPHTVRLAFGASNRVVLPLSVLFGAAFMVAADL 816 V QL DGLP + +DSGL+ AIV QIRLPR+VLGL+VGATLS+SGAAYQGAFRNPLADPYLLGIAAGAGLGAT+AIT GDGAG DPVPLAAFAG L +V +SY AGH+GGRST +LILAG+AVASFLTACQTYVLQANSD R++++WILGRIATSGW EPAL+ PYFV+ VVLRYRRALDVLAVGDEEAAALG++PRRVR++VVLAASLGAAAAV+VSGLIGFVGIIVPH VRLAFG SNR VLPLSVLFG AFMV ADL Sbjct: 38 VVIQLLDGLPAVSLDSGLSDAHAAIVEQIRLPRVVLGLLVGATLSMSGAAYQGAFRNPLADPYLLGIAAGAGLGATVAITSNLGDGAGALDPVPLAAFAGALISVTVSYAAGHLGGRSTASLILAGIAVASFLTACQTYVLQANSDAFRQIFAWILGRIATSGWSEPALMLPYFVVAAAVVLRYRRALDVLAVGDEEAAALGLEPRRVRMIVVLAASLGAAAAVSVSGLIGFVGIIVPHAVRLAFGTSNRAVLPLSVLFGGAFMVLADL 306
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Match: A0A3M2GI07_ACTSX (Iron ABC transporter permease n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GI07_ACTSX) HSP 1 Score: 401 bits (1031), Expect = 1.190e-137 Identity = 218/269 (81.04%), Postives = 240/269 (89.22%), Query Frame = 1 Query: 10 VFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSGAAYQGAFRNPLADPYLLGIAAGAGLGATIAITEGFGDGAGVFDPVPLAAFAGGLAAVWISYLAGHIGGRSTVTLILAGVAVASFLTACQTYVLQANSDVIREVYSWILGRIATSGWDEPALLAPYFVLTLVVVLRYRRALDVLAVGDEEAAALGVDPRRVRLVVVLAASLGAAAAVAVSGLIGFVGIIVPHTVRLAFGASNRVVLPLSVLFGAAFMVAADL 816 VF +L D L + VDSGL AIV++IRLPR+VLGL+VGATLSL+GAAYQGAFRNPLADPYLLGIAAGAGLGAT+A+T GDG G DPVPLAAFAG L AV SYL GH+GGRSTV+LILAGVAVASFLTACQTYVLQ+N+DVIRE+Y+WILGR+ATSGW EPALLAPYFVLT VVLR+RRALDVLAV DEEAAALG+DPRRVRL VV+AASLGAAAAV+VSGLIGFVGIIVPHTVRLAFGA +R VLPLS+LFGAAFMVAADL Sbjct: 67 VFLELVDHLTGLHVDSGLDAGTAAIVTEIRLPRVVLGLLVGATLSLTGAAYQGAFRNPLADPYLLGIAAGAGLGATVALTADLGDGVGWADPVPLAAFAGALVAVAASYLLGHLGGRSTVSLILAGVAVASFLTACQTYVLQSNTDVIREIYAWILGRVATSGWSEPALLAPYFVLTAAVVLRHRRALDVLAVSDEEAAALGLDPRRVRLTVVVAASLGAAAAVSVSGLIGFVGIIVPHTVRLAFGAGHRRVLPLSILFGAAFMVAADL 335
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Match: A0A7K2BST3_9ACTN (Iron ABC transporter permease n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2BST3_9ACTN) HSP 1 Score: 384 bits (986), Expect = 4.880e-131 Identity = 203/270 (75.19%), Postives = 233/270 (86.30%), Query Frame = 1 Query: 10 VFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSGAAYQGAFRNPLADPYLLGIAAGAGLGATIAITEGFGDGAGVFDPVPLAAFAGGLAAVWISYLAGHIGGRSTVTLILAGVAVASFLTACQTYVLQANSDVIREVYSWILGRIATSGWDEPALLAPYFVLTLVVVLRYRRALDVLAVGDEEAAALGVDPRRVRLVVVLAASLGAAAAVAVSGLIGFVGIIVPHTVRLAFGASNRVVLPLSVLFGAAFMVAADLI 819 V +LAD LP + DSGL+ AIV+ IRLPR+VLGL+VGATL++SGA YQ AFRNPLADPYLLGIAAGAGLGAT+AI GDGAG+FDPVPLAAFAG + AV ++ AGH+GGRST +LILAG+AVASFL ACQTY+LQAN+D R++++WILGRIATSGW EPALLAPYF++T VVVLRYRRALDVLAVGD+EAAALG++PR VR +VVLAASLG AAAV+VSGLIGFVGIIVPH VRL FG SNR VLPLSVLFG AFMV ADL+ Sbjct: 52 VVMELADALPAVNADSGLSDAHAAIVTNIRLPRVVLGLLVGATLAVSGATYQAAFRNPLADPYLLGIAAGAGLGATVAIVNNAGDGAGLFDPVPLAAFAGAIVAVVAAFAAGHLGGRSTASLILAGIAVASFLGACQTYMLQANNDAFRKIFAWILGRIATSGWSEPALLAPYFLVTTVVVLRYRRALDVLAVGDDEAAALGLEPRLVRTIVVLAASLGTAAAVSVSGLIGFVGIIVPHAVRLVFGTSNRAVLPLSVLFGGAFMVLADLV 321
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Match: A0A6B1B3S0_9ACTN (Iron ABC transporter permease n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6B1B3S0_9ACTN) HSP 1 Score: 383 bits (984), Expect = 6.980e-131 Identity = 203/269 (75.46%), Postives = 235/269 (87.36%), Query Frame = 1 Query: 10 VFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSGAAYQGAFRNPLADPYLLGIAAGAGLGATIAITEGFGDGAGVFDPVPLAAFAGGLAAVWISYLAGHIGGRSTVTLILAGVAVASFLTACQTYVLQANSDVIREVYSWILGRIATSGWDEPALLAPYFVLTLVVVLRYRRALDVLAVGDEEAAALGVDPRRVRLVVVLAASLGAAAAVAVSGLIGFVGIIVPHTVRLAFGASNRVVLPLSVLFGAAFMVAADL 816 V +LA+ LP I V+SGL+ +AIV+ IRLPR+VLGL+VGATL++SGA YQ AFRNPLADPYLLGIAAGAGLGATIAI GDGAGVFD VPLAAF G L AV ++YLAGHIGGRST +LILAG+AVASFL ACQTY+LQAN+D R++ +W+LGRIATSGW EPALL PYFV+T VVLRYRRALDVLAVGDEEAAALG++PRR+RL+V++AASLGAAAAV+VSGLI FVGIIVPH +RL FG+SNRV+LPLSVLFG AF+V ADL Sbjct: 42 VLMELANLLPGIAVESGLSDAHKAIVTDIRLPRVVLGLLVGATLAMSGATYQAAFRNPLADPYLLGIAAGAGLGATIAIVNDIGDGAGVFDLVPLAAFGGALGAVTVAYLAGHIGGRSTASLILAGIAVASFLAACQTYLLQANADAFRQILAWLLGRIATSGWSEPALLLPYFVVTTAVVLRYRRALDVLAVGDEEAAALGLEPRRIRLIVLIAASLGAAAAVSVSGLISFVGIIVPHAIRLIFGSSNRVLLPLSVLFGGAFLVLADL 310
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Match: A0A2D6UCB1_9ACTN (ABC transporter permease n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6UCB1_9ACTN) HSP 1 Score: 382 bits (980), Expect = 3.850e-130 Identity = 202/269 (75.09%), Postives = 232/269 (86.25%), Query Frame = 1 Query: 10 VFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSGAAYQGAFRNPLADPYLLGIAAGAGLGATIAITEGFGDGAGVFDPVPLAAFAGGLAAVWISYLAGHIGGRSTVTLILAGVAVASFLTACQTYVLQANSDVIREVYSWILGRIATSGWDEPALLAPYFVLTLVVVLRYRRALDVLAVGDEEAAALGVDPRRVRLVVVLAASLGAAAAVAVSGLIGFVGIIVPHTVRLAFGASNRVVLPLSVLFGAAFMVAADL 816 + +L D LP I +DSGL+ AI+ QIRLPR+VLG +VGATLS+SGAAYQGAFRNPLADPYLLGIAAGAGLGAT+AIT+ +GDG G DPVPLAAF G L AV +SY AGH+GGRST +LILAGVAVASFLTA QTYVLQANSD REVY+WILGRIATSGW E L+ PYF+L +V RYRRALDVLA+GDEEA ALG++PR++R++VVLAASLGAAAAV+VSGLIGFVGIIVPH VRLAFGAS+RV++PLS+LFG AFMV ADL Sbjct: 51 IVYELLDDLPLINLDSGLSAQRVAIIEQIRLPRVVLGFLVGATLSVSGAAYQGAFRNPLADPYLLGIAAGAGLGATVAITQDWGDGGGFTDPVPLAAFGGALLAVVLSYTAGHVGGRSTASLILAGVAVASFLTAAQTYVLQANSDAFREVYAWILGRIATSGWSEVVLMVPYFLLAAGIVFRYRRALDVLAIGDEEAQALGLEPRKIRVIVVLAASLGAAAAVSVSGLIGFVGIIVPHAVRLAFGASHRVLVPLSILFGGAFMVLADL 319
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Match: A0A800ICR8_9ACTN (Iron ABC transporter permease n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800ICR8_9ACTN) HSP 1 Score: 336 bits (862), Expect = 2.330e-112 Identity = 182/275 (66.18%), Postives = 218/275 (79.27%), Query Frame = 1 Query: 1 VGEVFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSGAAYQGAFRNPLADPYLLGIAAGAGLGATIAITEGFGDGAGVFDPVPLAAFAGGLAAVWISYLAGHIGGR--STVTLILAGVAVASFLTACQTYVLQANSDVIREVYSWILGRIATSGWDEPALLAPYFVLTLVVVLRYRRALDVLAVGDEEAAALGVDPRRVRLVVVLAASLGAAAAVAVSGLIGFVGIIVPHTVRLAFGASNRVVLPLSVLFGAAFMVAADLI 819 VGEV R+L DGLP ++VDSGL ++AI+ +IRLPR+VLGLMVGA L +G AYQG FRNPLADPYLLG+AAGAG GAT AI G GDG GVFD VP+ AFAG L AV ++YL G GGR +L+LAGVAVASF TA QT+V Q NS+ IR+VY ++LG++ T+GW+E L+ PY V+ L V+L RR +D L VGDEEA +LG+D RRVRLV VLAASLG AA V+VSGLIGFVGIIVPHT+RL FG+S RV+LPL+VLFG AFMVAADL+ Sbjct: 38 VGEVLRELFDGLPLVDVDSGLGVRQKAIIWEIRLPRVVLGLMVGAMLGTAGGAYQGVFRNPLADPYLLGVAAGAGFGATTAIVAGLGDGIGVFDAVPMMAFAGALTAVALTYLVGSAGGRLDPVTSLVLAGVAVASFFTAVQTFVQQRNSETIRQVYFFVLGQLRTAGWNEVLLITPYVVVCLTVILLVRRRMDALGVGDEEAGSLGLDVRRVRLVTVLAASLGTAAVVSVSGLIGFVGIIVPHTIRLLFGSSYRVILPLTVLFGGAFMVAADLV 312
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Match: A0A355DCP8_9ACTN (ABC transporter permease n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A355DCP8_9ACTN) HSP 1 Score: 333 bits (855), Expect = 3.610e-111 Identity = 180/275 (65.45%), Postives = 220/275 (80.00%), Query Frame = 1 Query: 1 VGEVFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSGAAYQGAFRNPLADPYLLGIAAGAGLGATIAITEGFGDGAGVFDPVPLAAFAGGLAAVWISYLAGHIGGR--STVTLILAGVAVASFLTACQTYVLQANSDVIREVYSWILGRIATSGWDEPALLAPYFVLTLVVVLRYRRALDVLAVGDEEAAALGVDPRRVRLVVVLAASLGAAAAVAVSGLIGFVGIIVPHTVRLAFGASNRVVLPLSVLFGAAFMVAADLI 819 +GEV +LADGLP+++ SGL +QAI+ +IRLPR+VL L+VGA L+ +G AYQG FRNPLADPYLLG+AAGAG GAT+AI G GDG GVFD VPL+AFAG LAAV ++YL G GGR +L+L+GVAVASF TA QT+V Q S+ IR+VY ++LG++ T+GWDE LLAPY V+ + V+L RR LD L VGDEEA ALG+D RR+RLV V+AASLG AAAV+VSGLIGFVGIIVPHTVRL FG S RV+LPL+VLFG AF+VAAD++ Sbjct: 47 IGEVLTELADGLPFVDAGSGLGARQQAIIWEIRLPRVVLALLVGAMLATAGGAYQGVFRNPLADPYLLGVAAGAGFGATMAIVSGVGDGIGVFDAVPLSAFAGALAAVTLTYLVGGTGGRLDPVTSLVLSGVAVASFFTAVQTFVQQRESETIRQVYFFVLGQLRTAGWDEVTLLAPYTVVCISVILLVRRRLDALGVGDEEAGALGLDVRRMRLVTVVAASLGTAAAVSVSGLIGFVGIIVPHTVRLLFGTSYRVILPLTVLFGGAFLVAADIV 321
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Match: A0A2E9W131_9ACTN (ABC transporter permease n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9W131_9ACTN) HSP 1 Score: 323 bits (828), Expect = 3.560e-107 Identity = 174/274 (63.50%), Postives = 216/274 (78.83%), Query Frame = 1 Query: 4 GEVFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSGAAYQGAFRNPLADPYLLGIAAGAGLGATIAITEGFGDGAGVFDPVPLAAFAGGLAAVWISYLAGHIGGR--STVTLILAGVAVASFLTACQTYVLQANSDVIREVYSWILGRIATSGWDEPALLAPYFVLTLVVVLRYRRALDVLAVGDEEAAALGVDPRRVRLVVVLAASLGAAAAVAVSGLIGFVGIIVPHTVRLAFGASNRVVLPLSVLFGAAFMVAADLI 819 GEV +L D LP ++VDSGL +QAI+ +IRLPR+VLGL+VGA L+ +G AYQG FRNPLADPYLLG+AAGAG GAT+AI G GDG G+ DPVPL+AFAG L AV ++YL G GGR +L+L+GVAVASF TA QT+V Q S+ IR+VY ++LG++ T+GW++ LLAPY + L V+L RR LD L VGDEEA +LG+D RR+RL+ V+AASLG AAAV+VSGLIGFVGIIVPHTVRL FG S RV+LPL+VLFG AF+V AD++ Sbjct: 41 GEVLVELVDRLPLVDVDSGLGERQQAIIWEIRLPRVVLGLLVGAMLATAGGAYQGVFRNPLADPYLLGVAAGAGFGATMAIVSGAGDGVGILDPVPLSAFAGALVAVTLTYLVGATGGRLDPVTSLVLSGVAVASFFTAVQTFVQQRESETIRQVYFFVLGQLRTAGWNDVTLLAPYTGVCLAVILMVRRRLDALGVGDEEAGSLGLDVRRMRLITVVAASLGTAAAVSVSGLIGFVGIIVPHTVRLLFGTSYRVILPLTVLFGGAFLVLADVV 314
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Match: A0A0C1UF30_9ACTN (ABC transporter permease n=2 Tax=unclassified Actinomycetia TaxID=52018 RepID=A0A0C1UF30_9ACTN) HSP 1 Score: 319 bits (818), Expect = 1.470e-105 Identity = 175/275 (63.64%), Postives = 214/275 (77.82%), Query Frame = 1 Query: 1 VGEVFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSGAAYQGAFRNPLADPYLLGIAAGAGLGATIAITEGFGDGAGVFDPVPLAAFAGGLAAVWISYLAGHIGGR--STVTLILAGVAVASFLTACQTYVLQANSDVIREVYSWILGRIATSGWDEPALLAPYFVLTLVVVLRYRRALDVLAVGDEEAAALGVDPRRVRLVVVLAASLGAAAAVAVSGLIGFVGIIVPHTVRLAFGASNRVVLPLSVLFGAAFMVAADLI 819 V EV ++ D LP+I+ DSGL+ EQAIV +IRLPR+VLGL+VG+ L+ +GA+YQG FRNPLADPYLLG+AAGAG GAT+AI G GDG G FD VP+ AFAG L AV ++YL G GR +L+LAGVAVASF TA QT+V Q +S+ IR+VY ++LG++ T+GWDE L++PY L+++L RR LDVL VGDEEA +LGVD R VRL VLAASLG AA VAVSGLIGFVGIIVPHT+RL FG S RV+LPL+VLFG AF+V ADL+ Sbjct: 48 VREVLVEMLDRLPYIDTDSGLSAREQAIVWEIRLPRVVLGLLVGSMLATAGASYQGVFRNPLADPYLLGVAAGAGFGATVAIVSGLGDGIGTFDAVPMLAFAGALIAVTLTYLVGFSAGRIDPVTSLVLAGVAVASFFTAVQTFVQQRDSETIRQVYFFVLGQLRTAGWDEVVLVSPYVGPCLLILLLLRRRLDVLGVGDEEAGSLGVDVRLVRLTAVLAASLGTAAVVAVSGLIGFVGIIVPHTIRLIFGFSYRVILPLTVLFGGAFLVGADLV 322
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Match: A0A2E4GSC1_9ACTN (ABC transporter permease n=4 Tax=Acidimicrobiales TaxID=84993 RepID=A0A2E4GSC1_9ACTN) HSP 1 Score: 318 bits (815), Expect = 3.110e-105 Identity = 174/273 (63.74%), Postives = 214/273 (78.39%), Query Frame = 1 Query: 7 EVFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSGAAYQGAFRNPLADPYLLGIAAGAGLGATIAITEGFGDGAGVFDPVPLAAFAGGLAAVWISYLAGHIGG--RSTVTLILAGVAVASFLTACQTYVLQANSDVIREVYSWILGRIATSGWDEPALLAPYFVLTLVVVLRYRRALDVLAVGDEEAAALGVDPRRVRLVVVLAASLGAAAAVAVSGLIGFVGIIVPHTVRLAFGASNRVVLPLSVLFGAAFMVAADLI 819 + ++L D LP+I VDSGL+ ++ I+ ++RLPR+ LG +VG TL+LSGA+YQ FRNPLADPYLLG AAGAGLGAT+AI G GDG G FD VPL AF G L AV ++YL G+ G RS L+LAGVAVASFLTA QT++ Q N + IR+VYSWILGR+ T+ WDE +LLAPY + +++L YRR LDV+ +GD EA++LG+ P+ VRLVV+ AASLG AAAVAVSGLI FVGIIVPHTVRL GASNRVVLPLS+LFGAAF+V DL+ Sbjct: 39 DALKELLDRLPFISVDSGLSPIQKNIIWEVRLPRVALGALVGGTLALSGASYQAVFRNPLADPYLLGAAAGAGLGATVAIVTGSGDGVGTFDLVPLLAFVGALIAVALTYLLGYSSGTQRSPAALLLAGVAVASFLTAIQTFIQQQNVETIRQVYSWILGRLNTASWDEVSLLAPYAFASGLLILVYRRVLDVMRLGDLEASSLGIRPQLVRLVVICAASLGTAAAVAVSGLIAFVGIIVPHTVRLVAGASNRVVLPLSILFGAAFLVFVDLL 311 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88357.20524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88357.20524.1 >prot_M-pyrifera_M_contig88357.20524.1 ID=prot_M-pyrifera_M_contig88357.20524.1|Name=mRNA_M-pyrifera_M_contig88357.20524.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=273bp VGEVFRQLADGLPWIEVDSGLTTTEQAIVSQIRLPRLVLGLMVGATLSLSback to top mRNA from alignment at M-pyrifera_M_contig88357:2..820- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88357.20524.1 ID=mRNA_M-pyrifera_M_contig88357.20524.1|Name=mRNA_M-pyrifera_M_contig88357.20524.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=819bp|location=Sequence derived from alignment at M-pyrifera_M_contig88357:2..820- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88357:2..820- >mRNA_M-pyrifera_M_contig88357.20524.1 ID=mRNA_M-pyrifera_M_contig88357.20524.1|Name=mRNA_M-pyrifera_M_contig88357.20524.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1638bp|location=Sequence derived from alignment at M-pyrifera_M_contig88357:2..820- (Macrocystis pyrifera P11B4 male)back to top |