mRNA_M-pyrifera_M_contig88354.20523.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Match: W7TXB8_9STRA (Decaprenyl-diphosphate synthase subunit 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXB8_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.220e-43 Identity = 113/260 (43.46%), Postives = 135/260 (51.92%), Query Frame = 1 Query: 1 NPMGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQRRLAEITEMIHAASLLHDDVIDDAETRRGVPSANAQFGNKVAILAGDFLLARASAALARLRHLGAVELLSTVIEHLVKGEVIQ---MANVGQKREGEVEEKEGHLSSPSHSSSALFDAYLRKSFYKTGSLIANAAKAAVLLAEDGE 771 +P +VE +M+ LSA I+ LLGSDHPVLE +YFF L SQ+RLAEITEMIH ASL HDDVID+A+ RRGVPS N +GNK+AILAGDFLLARAS +LARLR++ VELLSTVIEHLVKGEV+Q A V GE + A + YL K+FYKTGSL+AN+ +AAVLLA G+ Sbjct: 142 DPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESSTP------------------------------LPSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALVDGSGTGE-------------NGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGD 358
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Match: B2ZWF4_9STRA (Polyprenyl synthetase (Fragment) n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=B2ZWF4_9STRA) HSP 1 Score: 155 bits (392), Expect = 5.300e-42 Identity = 105/257 (40.86%), Postives = 135/257 (52.53%), Query Frame = 1 Query: 1 NPMGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQRRLAEITEMIHAASLLHDDVIDDAETRRGVPSANAQFGNKVAILAGDFLLARASAALARLRHLGAVELLSTVIEHLVKGEVIQMANVGQKREGEVEEKEGHLSSPSHSSSALFDAYLRKSFYKTGSLIANAAKAAVLLAEDGE 771 +P +V++ + +S NI+ +LGSDHPVLE V +YFF SQ+RLAEITEMIH ASLLHDDVID+A+TRRG+ S N FG+K++ILAGDFLLAR+S LARLR L AVEL+ST IEHLVKGEV+QM + +K G +S F+ YLRK++YKTGSL+AN+ KA+++L E E Sbjct: 42 DPFALVKDSISSVSDNIKMILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSRAAEAERAADQSTFPKSPEYIAA------------------------------------SQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKMSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRHA---------DKNGAISP--------FEYYLRKNYYKTGSLMANSCKASLILGEHSE 245
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Match: W4H8F9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8F9_9STRA) HSP 1 Score: 153 bits (387), Expect = 2.410e-41 Identity = 104/257 (40.47%), Postives = 135/257 (52.53%), Query Frame = 1 Query: 1 NPMGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQRRLAEITEMIHAASLLHDDVIDDAETRRGVPSANAQFGNKVAILAGDFLLARASAALARLRHLGAVELLSTVIEHLVKGEVIQMANVGQKREGEVEEKEGHLSSPSHSSSALFDAYLRKSFYKTGSLIANAAKAAVLLAEDGE 771 +P +V++ + +SANI+ +LGSDHPVLE V +YFF SQ+RLAEITEMIH ASLLHDDVID+A+TRRG+ S N FG+K++ILAGDFLLAR+S LARLR L AVEL+ST IEHLVKGEV+QM + + G SP F+ YLRK++YKTGSL+AN+ KA+++L + + Sbjct: 99 DPFALVKDSIVSVSANIKMILGSDHPVLEAVAKYFFDNDGGKKIRPTMILLVSQAAEADRVADQSTFPKSPEYIAA------------------------------------SQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKLSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRHADK----------GGTISP-------FEYYLRKNYYKTGSLMANSCKASLVLGDHSD 302
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Match: A0A6G0XWT1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWT1_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.760e-41 Identity = 105/257 (40.86%), Postives = 135/257 (52.53%), Query Frame = 1 Query: 1 NPMGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQRRLAEITEMIHAASLLHDDVIDDAETRRGVPSANAQFGNKVAILAGDFLLARASAALARLRHLGAVELLSTVIEHLVKGEVIQMANVGQKREGEVEEKEGHLSSPSHSSSALFDAYLRKSFYKTGSLIANAAKAAVLLAEDGE 771 +P +V++ + +S NI+ +LGSDHPVLE V +YFF SQ+RLAEITEMIH ASLLHDDVID+A+TRRG+ S N FG+K++ILAGDFLLAR+S LARLR L AVEL+ST IEHLVKGEV+QM + +K G +S F+ YLRK++YKTGSL+AN+ KA+++L E E Sbjct: 97 DPFALVKDSISSVSDNIKMILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSRAAEAERAADQSTFPKSPEYIAA------------------------------------SQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKMSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRHA---------DKNGAISP--------FEYYLRKNYYKTGSLMANSCKASLILGEHSE 300
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Match: A0A024U4T7_9STRA (Solanesyl diphosphate synthase, variant n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4T7_9STRA) HSP 1 Score: 154 bits (388), Expect = 6.690e-41 Identity = 104/254 (40.94%), Postives = 135/254 (53.15%), Query Frame = 1 Query: 1 NPMGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQRRLAEITEMIHAASLLHDDVIDDAETRRGVPSANAQFGNKVAILAGDFLLARASAALARLRHLGAVELLSTVIEHLVKGEVIQMANVGQKREGEVEEKEGHLSSPSHSSSALFDAYLRKSFYKTGSLIANAAKAAVLLAE 762 +P +V++ + +SANI+ +LGSDHPVLE V +YFF SQ+RLAEITEMIH ASLLHDDVID+A+TRRG+ S N FG+K++ILAGDFLLAR+S LARLR L AVEL+ST IEHLVKGEV+QM + +K G +S F+ YLRK++YKTGSL+AN+ KA+++L + Sbjct: 97 DPFALVKDSIVSVSANIKMILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSQAAEADRLAGQSTFPKSAEYIAA------------------------------------SQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKLSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRHA---------DKSGAISP--------FEYYLRKNYYKTGSLMANSCKASLVLGD 297
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Match: A0A024U4S8_9STRA (Solanesyl diphosphate synthase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4S8_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.440e-40 Identity = 104/254 (40.94%), Postives = 135/254 (53.15%), Query Frame = 1 Query: 1 NPMGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQRRLAEITEMIHAASLLHDDVIDDAETRRGVPSANAQFGNKVAILAGDFLLARASAALARLRHLGAVELLSTVIEHLVKGEVIQMANVGQKREGEVEEKEGHLSSPSHSSSALFDAYLRKSFYKTGSLIANAAKAAVLLAE 762 +P +V++ + +SANI+ +LGSDHPVLE V +YFF SQ+RLAEITEMIH ASLLHDDVID+A+TRRG+ S N FG+K++ILAGDFLLAR+S LARLR L AVEL+ST IEHLVKGEV+QM + +K G +S F+ YLRK++YKTGSL+AN+ KA+++L + Sbjct: 97 DPFALVKDSIVSVSANIKMILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSQAAEADRLAGQSTFPKSAEYIAA------------------------------------SQQRLAEITEMIHTASLLHDDVIDEADTRRGMQSVNKVFGSKLSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRHA---------DKSGAISP--------FEYYLRKNYYKTGSLMANSCKASLVLGD 297
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Match: A0A8K1CPQ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPQ7_PYTOL) HSP 1 Score: 152 bits (385), Expect = 3.540e-40 Identity = 102/257 (39.69%), Postives = 132/257 (51.36%), Query Frame = 1 Query: 1 NPMGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQRRLAEITEMIHAASLLHDDVIDDAETRRGVPSANAQFGNKVAILAGDFLLARASAALARLRHLGAVELLSTVIEHLVKGEVIQMANVGQKREGEVEEKEGHLSSPSHSSSALFDAYLRKSFYKTGSLIANAAKAAVLLAEDGE 771 +P +V+ EM ++ +I+ +LGSDHPVL V +YFF + +Q+RLAEITEMIH ASLLHDDVID+A+TRRGVPS N FG+K++ILAGDFLLAR+S LARLR L A+EL+ST IEHLVKGEV+QM N + S F+ YLRK++YKTGSL+AN+ +AA+ L + E Sbjct: 89 DPFQLVQHEMVSVTESIKRILGSDHPVLSAVARYFFEHDGGKKVRPTMVLLVSMAAEAHRRAVGLPLPSTQSEEFT----------------------------------VAAQQRLAEITEMIHTASLLHDDVIDEADTRRGVPSVNKVFGDKLSILAGDFLLARSSICLARLRSLEAIELMSTAIEHLVKGEVMQMKNADGR-----------------SDITPFEYYLRKNYYKTGSLMANSCRAALALGKHDE 294
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Match: G4ZWZ2_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZWZ2_PHYSP) HSP 1 Score: 152 bits (385), Expect = 6.410e-40 Identity = 101/257 (39.30%), Postives = 134/257 (52.14%), Query Frame = 1 Query: 1 NPMGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQRRLAEITEMIHAASLLHDDVIDDAETRRGVPSANAQFGNKVAILAGDFLLARASAALARLRHLGAVELLSTVIEHLVKGEVIQMANVGQKREGEVEEKEGHLSSPSHSSSALFDAYLRKSFYKTGSLIANAAKAAVLLAEDGE 771 +P +VE++M ++ +I+ +LGSDHPVLE V +YFF +Q+RLAEITEMIH ASL+HDDVID+A+TRRG PS N FG K+A+LAGDFLLAR+S +LARLR+L AVEL+ST IEHLVKGEV+QM N + + F+ YLRK++YKTGSL++N+ KAA++L + E Sbjct: 104 DPFTLVEQDMVSVTESIKRILGSDHPVLEAVARYFFEHDGGKKVRPTMVLLVARTAEAHRRATGAPLPETQSEEYTRA----------------------------------AQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLEAVELMSTSIEHLVKGEVMQMKNADARDD-----------------ITPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDE 309
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Match: A0A0P1AGZ3_PLAHL (Geranylgeranyl diphosphate synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGZ3_PLAHL) HSP 1 Score: 151 bits (381), Expect = 1.380e-39 Identity = 101/257 (39.30%), Postives = 133/257 (51.75%), Query Frame = 1 Query: 1 NPMGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQRRLAEITEMIHAASLLHDDVIDDAETRRGVPSANAQFGNKVAILAGDFLLARASAALARLRHLGAVELLSTVIEHLVKGEVIQMANVGQKREGEVEEKEGHLSSPSHSSSALFDAYLRKSFYKTGSLIANAAKAAVLLAEDGE 771 +P +V +++ ++ +I+ +LGSDHPVL V +YFF L +Q+RLAEITEMIH ASL+HDDVIDDAETRRG PS N FG K+A+LAGDFLLAR+S +LARLR+L AVEL+ST IEHLVKGEV+QM N + + F+ YLRK++YKTGSL++N+ KAA++L + E Sbjct: 90 DPFQLVAQDIVNVNDSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVSRAAEAHRRITSTPLPEMQSKEYT----------------------------------LAAQQRLAEITEMIHTASLMHDDVIDDAETRRGQPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLQAVELMSTSIEHLVKGEVMQMKNADTRDD-----------------ITPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDE 295
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Match: A0A1V9Z381_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z381_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.860e-39 Identity = 101/254 (39.76%), Postives = 135/254 (53.15%), Query Frame = 1 Query: 1 NPMGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQRRLAEITEMIHAASLLHDDVIDDAETRRGVPSANAQFGNKVAILAGDFLLARASAALARLRHLGAVELLSTVIEHLVKGEVIQMANVGQKREGEVEEKEGHLSSPSHSSSALFDAYLRKSFYKTGSLIANAAKAAVLLAE 762 +P ++++++ +S +I+ +LGSDHPVLE V +YFF SQ+RLAEITEMIH ASLLHDDVID+A+TRRG+ S N FG+K++ILAGDFLLAR+S LARLR L AVEL+ST IEHLVKGEV+QM + +K G ++ F+ YLRK++YKTGSL+AN+ +AA++L E Sbjct: 97 DPFELIKDKIVSVSESIKTILGSDHPVLEAVAKYFFENDGGKKIRPTMILLLSQAAEAARDVDNTDKSIEYISA--------------------------------------SQQRLAEITEMIHTASLLHDDVIDEADTRRGMKSVNKVFGSKLSILAGDFLLARSSICLARLRSLEAVELMSTAIEHLVKGEVMQMRHA---------DKNGQITP--------FEYYLRKNYYKTGSLMANSCRAALVLGE 295 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88354.20523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88354.20523.1 >prot_M-pyrifera_M_contig88354.20523.1 ID=prot_M-pyrifera_M_contig88354.20523.1|Name=mRNA_M-pyrifera_M_contig88354.20523.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp MGVVEEEMQQLSANIRGLLGSDHPVLETVGQYFFSEEGGGGKKVRPALVLback to top mRNA from alignment at M-pyrifera_M_contig88354:8..778+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88354.20523.1 ID=mRNA_M-pyrifera_M_contig88354.20523.1|Name=mRNA_M-pyrifera_M_contig88354.20523.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig88354:8..778+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88354:8..778+ >mRNA_M-pyrifera_M_contig88354.20523.1 ID=mRNA_M-pyrifera_M_contig88354.20523.1|Name=mRNA_M-pyrifera_M_contig88354.20523.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig88354:8..778+ (Macrocystis pyrifera P11B4 male)back to top |