mRNA_M-pyrifera_M_contig88344.20520.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Match: D2VMC5_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VMC5_NAEGR) HSP 1 Score: 62.0 bits (149), Expect = 8.480e-10 Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 7 YIIVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASADRAKDLRELVQKLNRRRGEVEEE 222 + I +C + C AF Q K R KWKC+LCG++QS+ +VFA++++ KDLR +VQ+LN +RGE+E+E Sbjct: 4 HAIFQCFN--CTAFSINQVTKNR------KWKCKLCGSQQSIRKVFANSNQPKDLRPIVQELNMKRGEIEQE 67
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Match: A0A6A5BTV8_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BTV8_NAEFO) HSP 1 Score: 61.2 bits (147), Expect = 2.020e-9 Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 7 YIIVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASADRAKDLRELVQKLNRRRGEVEEE 222 Y + +C C AF Q K R KWKC+LCG++QS+ ++FA++ + KDLR +VQ+ N +RGE+E+E Sbjct: 5 YAVFQCYQ--CSAFSVNQITKNR------KWKCKLCGSQQSIRKIFATSHQPKDLRPIVQQFNEKRGEIEQE 68
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Match: UPI001CFCE7EF (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFCE7EF) HSP 1 Score: 58.9 bits (141), Expect = 1.230e-8 Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 7 YIIVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASADRAKDLRELVQKLNRRRGEVEEE 222 Y + +C C AF Q K R KWKC+LCG++QS+ +++A++ + KDLR +VQ+ N +RGE+E+E Sbjct: 5 YAVFQCYQ--CSAFSVNQITKNR------KWKCKLCGSQQSIRKMYATSHQPKDLRPIVQQYNEKRGEIEQE 68
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Match: A0A2T9YQK6_9FUNG (Uncharacterized protein n=1 Tax=Furculomyces boomerangus TaxID=61424 RepID=A0A2T9YQK6_9FUNG) HSP 1 Score: 57.4 bits (137), Expect = 4.780e-8 Identity = 27/68 (39.71%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 13 IVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASADRAKDLRELVQKLNRRRGEVE 216 +++CA CG F Q+ K +KW C++CG +QS+++VF + A + R++VQ+LNR RGE+E Sbjct: 6 VLKCAFDQCGTFQVQQKKK------LSKWSCKVCGEKQSLIKVFFESSTAPECRKVVQELNRSRGELE 67
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Match: A0A7S3PL25_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PL25_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 8.120e-8 Identity = 28/73 (38.36%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 1 MRYIIVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASADRAKDLRELVQKLNRRRGEVEE 219 + YI+V+C G C F +Q PK + K+ CR+C + S+ RV+AS+++A+++R + Q LN +RGE+E+ Sbjct: 2 VNYIVVQC--GECNVFQCIQAPKSK------KFLCRVCNEKNSLRRVYASSNKAREIRPICQLLNVKRGEIED 66
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Match: A0A1Y2C0C8_9FUNG (SP-RING-type domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C0C8_9FUNG) HSP 1 Score: 53.1 bits (126), Expect = 1.330e-6 Identity = 31/68 (45.59%), Postives = 40/68 (58.82%), Query Frame = 1 Query: 13 IVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASADRAKDLRELVQKLNRRRGEVE 216 +VRC C AF+ QE K KW+C LCG++QSV +V+ + A D R VQ+LN RRGE E Sbjct: 6 VVRCFQ--CSAFVVQQEKKSN------KWQCTLCGSKQSVTKVYFESHVAGDTRAAVQELNMRRGENE 65
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Match: A0A210R046_MIZYE (UPF0544 protein C5orf45-like n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210R046_MIZYE) HSP 1 Score: 51.6 bits (122), Expect = 7.950e-6 Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 1 Query: 13 IVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASADRAKDLRELVQKLNRRRGEVEE 219 ++RC C F Q K A KW C++CG +QSV++VF A D R VQKLN RGE+E+ Sbjct: 7 VLRCYQ--CSTFQVHQVKK------AKKWSCKMCGEKQSVIKVFGRGAAAADCRHHVQKLNNLRGEIEQ 67
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Match: L1J5E1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5E1_GUITC) HSP 1 Score: 50.8 bits (120), Expect = 1.370e-5 Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 1 Query: 7 YIIVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASADRAKDLRELVQKLNRRRGEVEE 219 YI+V+C CG F QE K K+ C +C +QSV ++FA ++ A+D R++ Q+LN RGEV E Sbjct: 4 YIVVQCYQ--CGLFQVTQEKKSTN-----KFVCPVCNEKQSVRKIFAQSEIARDCRQVTQELNMTRGEVVE 67
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Match: UPI00035988A5 (uncharacterized protein LOC101846282 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035988A5) HSP 1 Score: 49.7 bits (117), Expect = 3.770e-5 Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 1 Query: 1 MRYIIVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASADRAKDLRELVQKLNRRRGEVEEE 222 + + +++CAD C F +Q K KWKC+LCG++QSV +V+ A D R VQKLN RG V++E Sbjct: 2 VEFHVLQCAD--CNTFQVLQVTKTN------KWKCKLCGSKQSVRKVYGRGTGA-DCRRHVQKLNTVRGHVDQE 66
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Match: A0A2T9Y4I8_9FUNG (Uncharacterized protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9Y4I8_9FUNG) HSP 1 Score: 48.9 bits (115), Expect = 6.310e-5 Identity = 22/72 (30.56%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 7 YIIVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASADRAKDLRELVQKLNRRRGEVEEE 222 ++++RCA C F Q+ K KW C++CG +Q++++++ A A + R++VQ+LN GE++++ Sbjct: 4 FLVLRCARDSCRIFQVQQKKKVN------KWSCKVCGEKQTLLKIYYEAPAAAECRKVVQELNYSSGELKKQ 69 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88344.20520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88344.20520.1 >prot_M-pyrifera_M_contig88344.20520.1 ID=prot_M-pyrifera_M_contig88344.20520.1|Name=mRNA_M-pyrifera_M_contig88344.20520.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp MRYIIVRCADGGCGAFMSVQEPKQRRGARAAKWKCRLCGTRQSVVRVFASback to top mRNA from alignment at M-pyrifera_M_contig88344:146..549+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88344.20520.1 ID=mRNA_M-pyrifera_M_contig88344.20520.1|Name=mRNA_M-pyrifera_M_contig88344.20520.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=404bp|location=Sequence derived from alignment at M-pyrifera_M_contig88344:146..549+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88344:146..549+ >mRNA_M-pyrifera_M_contig88344.20520.1 ID=mRNA_M-pyrifera_M_contig88344.20520.1|Name=mRNA_M-pyrifera_M_contig88344.20520.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig88344:146..549+ (Macrocystis pyrifera P11B4 male)back to top |