mRNA_M-pyrifera_M_contig88339.20518.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88339.20518.1 vs. uniprot
Match: A0A2H3JZ35_WOLCO (HET-R (Fragment) n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3JZ35_WOLCO) HSP 1 Score: 58.2 bits (139), Expect = 3.940e-7 Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 31 SILTCSRELRLWDAHSGELRWSHRHYEADPRNAIYSPDGQMIATAIGNRIVALIDPTSGEIIGELQSDKGRGTTLAFASDSRTLAVSTHKSNI-----ITLWDIQTRQ--ELCVLETNLKYLSSLAFSPDAKRLVAA 420 SI S + WDA LR H A + +SP+GQ IA+A G++ V + D SG + ++ KGR T++A + DS+ ++ I + +WD T + +L ++ + Y+ S+A+SPD R+V A Sbjct: 11 SISLLSPRRQQWDAC---LRVIGDHANA-VNSVTFSPNGQWIASASGDKTVRMFDAVSGTTLNTMRGHKGRVTSVAVSPDSQFAVSGSYNGEINMEAMLHMWDPDTGECLQLAIVGEDT-YVYSVAYSPDGGRIVTA 142
BLAST of mRNA_M-pyrifera_M_contig88339.20518.1 vs. uniprot
Match: A0A1Q7ZWK7_9CYAN (Uncharacterized protein n=1 Tax=Cyanobacteria bacterium 13_1_40CM_2_61_4 TaxID=1805101 RepID=A0A1Q7ZWK7_9CYAN) HSP 1 Score: 56.2 bits (134), Expect = 2.570e-6 Identity = 42/160 (26.25%), Postives = 78/160 (48.75%), Query Frame = 1 Query: 13 FSPNAESILTC-SRELRLWDAHSGELRWSHRHYEADPRNAIYSPDGQMIATAIGNRIVALIDPTSGEIIGELQS----------------DKGRGTTLAFASDSRTLAVSTH-KSNIITLWDIQTRQELCVLETNLKYLSS--------LAFSPDAKRLV 414 FSP++ ++T ++WDA +G+L++S ++AD +A++SP+G+ +AT+ + V L T+G++I L D ++F+SD R L + +S+ LWD++T + L L+ + FSPD K ++ Sbjct: 130 FSPDSHLLVTLRGTTAKVWDAATGQLKYSLTGHQADIDSAVFSPNGERLATSSADGTVRLWSSTTGQLITMLAVWRVKKIPRWRVVSQFLDIPISIYVSFSSDGRRLLTAVEWESSPAKLWDVETGRLLATLDGPTERWGGGKGPAAVKAMFSPDGKLIL 289
BLAST of mRNA_M-pyrifera_M_contig88339.20518.1 vs. uniprot
Match: A0A2Z3H048_9BACT (Uncharacterized protein n=1 Tax=Gemmata obscuriglobus TaxID=114 RepID=A0A2Z3H048_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 5.320e-6 Identity = 35/100 (35.00%), Postives = 53/100 (53.00%), Query Frame = 1 Query: 118 PRNAIYSPDGQMIATAIGNRIVALIDPTSGEIIGELQSDKGRGTTLAFASDSRTLAVSTHKSNIITLWDIQTRQELCVLETNLKYLSSLAFSPDAKRLVA 417 P + +SPDG+ + A + L++ +GE + L+ + T F+ D +T+A T + + LWD T EL L LSS+AFSPD K+LVA Sbjct: 103 PNSVAFSPDGRRVLIAGTDPEARLVEGDTGEAVFSLKLNDS--TRAVFSPDGKTIATGTAAA-AVQLWDAATGDELVKLPGATGRLSSVAFSPDGKKLVA 199
BLAST of mRNA_M-pyrifera_M_contig88339.20518.1 vs. uniprot
Match: A0A225EEX0_9BACT (High-affnity carbon uptake protein Hat/HatR n=1 Tax=Fimbriiglobus ruber TaxID=1908690 RepID=A0A225EEX0_9BACT) HSP 1 Score: 54.7 bits (130), Expect = 9.920e-6 Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 133 YSPDGQMIATAIGNRIVALIDPTSGEIIGELQSDKGRGTTLAFASDSRTLAVSTHK---SNIITLWDIQTR---QELCVLETNLKYLSSLAFSPDAKRLVAAG 423 Y DG ++A +V LIDPT+GE IGEL R T LAF S LAV++ + S +I L+D T + L + + + +LAFSPD K L +AG Sbjct: 31 YRTDGSLLAAGSRGTVV-LIDPTTGEAIGELTGQTQRVTALAF-SHGGLLAVASGEPGISGLIGLYDATTPTVGKPLASIAAHKDIIYALAFSPDGKTLASAG 131
BLAST of mRNA_M-pyrifera_M_contig88339.20518.1 vs. uniprot
Match: A0A354GS47_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354GS47_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 1.830e-5 Identity = 40/116 (34.48%), Postives = 58/116 (50.00%), Query Frame = 1 Query: 124 NAIYSPDGQMIATAIGNRIVALIDPTSGEIIGELQSDKGRGT-TLAFASDSRTLAVS-----------THKSNIITLWDIQTRQELCVLET------NLKYLSSLAFSPDAKRLVA 417 +A+YSPDG+++ATA N + L D +G+ I +S+K +LAF+ D +TLA T +TLWD+ TR+ E N + LA+SPD K L A Sbjct: 319 DAVYSPDGKILATAGDNGWIHLWDAATGKGIAAWESEKNTLLLSLAFSPDGKTLASGGMGFDLAKHEVTRLPTKLTLWDVATRKPRLSFENEHDQFGNQRDFRRLAYSPDGKWLAA 434
BLAST of mRNA_M-pyrifera_M_contig88339.20518.1 vs. uniprot
Match: A0A2V8RUD7_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8RUD7_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 3.440e-5 Identity = 41/134 (30.60%), Postives = 60/134 (44.78%), Query Frame = 1 Query: 52 ELRLWDAHSGELRWSHRHYEADPRNAIYSPDGQMIATAIGNRIVALIDPTSGEII---------GELQSDKGRGTTLAFASDSRTLAVSTHKSNIITLWDIQTRQELCVLETNLKYLSSLAFSPDAKRLVAAGQ 426 +L+LWD + R + SPDG ++ATA+GN V L D T+G + + + G L F+ D R LA ++ ITLWD QT + + L+ + AFSPD RL + Sbjct: 314 QLKLWDFTAKTGRTLLTLPRGRAASFDLSPDGHLLATAVGNT-VKLWDTTTGSEVHTFDVPAPLAQFAPEVGVNA-LVFSPDGRLLATTSGMDGQITLWDTQTTRVVQRLKGGTNFAYDAAFSPDGTRLYTGAK 445
BLAST of mRNA_M-pyrifera_M_contig88339.20518.1 vs. uniprot
Match: A0A1U7IC89_9NOSO (ANAPC4_WD40 domain-containing protein n=1 Tax=Nostoc calcicola FACHB-389 TaxID=1357508 RepID=A0A1U7IC89_9NOSO) HSP 1 Score: 52.0 bits (123), Expect = 8.070e-5 Identity = 44/157 (28.03%), Postives = 73/157 (46.50%), Query Frame = 1 Query: 7 IAFSPNAESILT--CSRELRLWDAHSGE-LRWSHRHY------EADPRNAIYSPDGQMIATAIGNRIVALIDPTSGEIIGELQ----------SDKGRGTTLAFASDSRTLAVSTHKSNIITLWDIQTRQELCVLETNLKYLSSLAFSPDAKRLVAA 420 I FSP+ + T E +WD + +R H Y DP ++SP+G+++A A R + L +SGE I + + G TLAF +D A S+ + + LW+++T E+C+LE + SL F + + LV++ Sbjct: 532 IIFSPDKRLLATRHSMSEFAIWDITTRRFIRTIHIDYCEGDTDPGDPDPVLFSPNGELLAIA-ATRNITLWQVSSGEKIHTIDRFYQGWQRCMAFSPNGQTLAFTADEVD-ASSSIRRGTLRLWNVETGNEICILEEPFYKIESLDFVGNGQVLVSS 686 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88339.20518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88339.20518.1 >prot_M-pyrifera_M_contig88339.20518.1 ID=prot_M-pyrifera_M_contig88339.20518.1|Name=mRNA_M-pyrifera_M_contig88339.20518.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp DWIAFSPNAESILTCSRELRLWDAHSGELRWSHRHYEADPRNAIYSPDGQback to top mRNA from alignment at M-pyrifera_M_contig88339:147..611+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88339.20518.1 ID=mRNA_M-pyrifera_M_contig88339.20518.1|Name=mRNA_M-pyrifera_M_contig88339.20518.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig88339:147..611+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88339:147..611+ >mRNA_M-pyrifera_M_contig88339.20518.1 ID=mRNA_M-pyrifera_M_contig88339.20518.1|Name=mRNA_M-pyrifera_M_contig88339.20518.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig88339:147..611+ (Macrocystis pyrifera P11B4 male)back to top |