|
Homology
BLAST of mRNA_M-pyrifera_M_contig8831.20509.1 vs. uniprot
Match: D7G7U9_ECTSI (E3 ubiquitin protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U9_ECTSI) HSP 1 Score: 455 bits (1171), Expect = 3.290e-150 Identity = 288/381 (75.59%), Postives = 309/381 (81.10%), Query Frame = 1
Query: 1 LRQARKRCIELSDSITSIREDCRKANRTLDKLAEDGVIVEVPSEKSASTWVSRRARGVQRGSRLSSGGMVSSYVGGIKAEGLSRGGDGADDPEDLLAALEEAQALCESRQKEIERCRAAKAEAERDLTRFKASTELDTQRSDLSGHPQFQRLSTQLEAEQDMLKLEKARVIELEDQIKQMAAQVEQHEMALQQQMEQQRLRWKSEIVSSNSMLNTAHEDLDKAQGKLKHEQRFGSGMLKSVTIAKEEAGRLLKQTEQQVSILKASLERATKAKEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---DSLRQLEGSKAVEDALQSELNTTLAAYAQSKEGNQKLIQEMTRISASRKELSDEVTSAKAQLKNRAKVR 1134
L QARKRC+ELS+S+TS+RE+CRKANRTLDKLA DGVIVEVPSEK S RR + G+ S+Y G G RG +GA D EDLLAALEEAQ L E+R KE+ER R K EAER+LT+FKASTEL+T+++DLSGHPQFQRLSTQLEAEQDMLKLEKARV ELE QIKQM+ QVEQHEMALQQQMEQQRLRWKSEIVSSNSMLNTAHEDLDKAQGKLKHEQRFGSGMLKSVTIAKEEA RLLKQTEQQVSILKASL+RATKAKEH XXXXXXXXX DSLRQLEGSKA+EDALQSELNTTLAAYAQSKEGNQKL+QEMTRISASRKELSDEVTS KAQLKNRAKVR
Sbjct: 301 LTQARKRCMELSESVTSLRENCRKANRTLDKLAADGVIVEVPSEKGTSGTGGRRGS-AEGGAAXXXXXXXSTYSVGT---GYKRGVNGAGDVEDLLAALEEAQTLAETRLKEMERWRTEKTEAERELTQFKASTELETKKADLSGHPQFQRLSTQLEAEQDMLKLEKARVTELEGQIKQMSGQVEQHEMALQQQMEQQRLRWKSEIVSSNSMLNTAHEDLDKAQGKLKHEQRFGSGMLKSVTIAKEEAERLLKQTEQQVSILKASLDRATKAKEHAEAQAAKDRARLERQGAXXXXXXXXXREDENLRAKLADSLRQLEGSKAIEDALQSELNTTLAAYAQSKEGNQKLVQEMTRISASRKELSDEVTSTKAQLKNRAKVR 677
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 471.5 |
Seed ortholog evalue | 3.8e-130 |
Seed eggNOG ortholog | 2880.D7G7U9 |
KEGG ko | ko:K10696 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000075,GO:0000077,GO:0000151,GO:0000152,GO:0000209,GO:0000228,GO:0000724,GO:0000725,GO:0000726,GO:0000729,GO:0000775,GO:0000785,GO:0000790,GO:0000792,GO:0000793,GO:0000794,GO:0000795,GO:0000800,GO:0000930,GO:0000931,GO:0001067,GO:0001817,GO:0001819,GO:0003674,GO:0003676,GO:0003677,GO:0003712,GO:0003713,GO:0003723,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005737,GO:0005815,GO:0005856,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006303,GO:0006310,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006342,GO:0006355,GO:0006357,GO:0006359,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006978,GO:0006996,GO:0007059,GO:0007154,GO:0007165,GO:0007275,GO:0007549,GO:0008092,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008274,GO:0008630,GO:0009048,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009719,GO:0009725,GO:0009755,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010212,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010565,GO:0010574,GO:0010575,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010646,GO:0010648,GO:0010824,GO:0010826,GO:0010941,GO:0010948,GO:0012501,GO:0014070,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016458,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016579,GO:0016740,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030330,GO:0030518,GO:0030521,GO:0030522,GO:0031056,GO:0031057,GO:0031058,GO:0031060,GO:0031061,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031371,GO:0031396,GO:0031398,GO:0031399,GO:0031400,GO:0031401,GO:0031436,GO:0031497,GO:0031570,GO:0031572,GO:0031618,GO:0031625,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032870,GO:0032886,GO:0032991,GO:0033043,GO:0033044,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033503,GO:0033523,GO:0033554,GO:0033993,GO:0034097,GO:0034612,GO:0034622,GO:0034641,GO:0034645,GO:0034724,GO:0034728,GO:0035065,GO:0035066,GO:0035067,GO:0035257,GO:0035258,GO:0035556,GO:0035690,GO:0036211,GO:0040029,GO:0042127,GO:0042221,GO:0042304,GO:0042493,GO:0042770,GO:0042772,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043412,GO:0043627,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044454,GO:0044464,GO:0045717,GO:0045739,GO:0045765,GO:0045766,GO:0045786,GO:0045787,GO:0045814,GO:0045833,GO:0045892,GO:0045893,GO:0045922,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046599,GO:0046600,GO:0046605,GO:0046606,GO:0046872,GO:0046890,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048856,GO:0050681,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051055,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051427,GO:0051493,GO:0051494,GO:0051569,GO:0051570,GO:0051571,GO:0051573,GO:0051716,GO:0051726,GO:0051865,GO:0060255,GO:0060548,GO:0062012,GO:0062014,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070063,GO:0070316,GO:0070317,GO:0070507,GO:0070510,GO:0070512,GO:0070531,GO:0070646,GO:0070647,GO:0070887,GO:0071103,GO:0071156,GO:0071158,GO:0071310,GO:0071345,GO:0071356,GO:0071383,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071680,GO:0071681,GO:0071704,GO:0071824,GO:0071840,GO:0071894,GO:0071944,GO:0072331,GO:0072395,GO:0072401,GO:0072422,GO:0072425,GO:0080090,GO:0080134,GO:0080135,GO:0085020,GO:0090068,GO:0090239,GO:0090240,GO:0090304,GO:0097159,GO:0097190,GO:0097193,GO:0097305,GO:0097306,GO:0097327,GO:0098687,GO:0099086,GO:0140096,GO:0140110,GO:1901342,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901983,GO:1901984,GO:1901985,GO:1901987,GO:1901988,GO:1902041,GO:1902042,GO:1902115,GO:1902116,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1902749,GO:1902750,GO:1903320,GO:1903322,GO:1903506,GO:1903507,GO:1903508,GO:1904018,GO:1905268,GO:1905269,GO:1990234,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000377,GO:2000378,GO:2000615,GO:2000617,GO:2000618,GO:2000620,GO:2000756,GO:2000757,GO:2000758,GO:2001020,GO:2001022,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001251,GO:2001252 |
EggNOG free text desc. | histone monoubiquitination |
EggNOG OGs | KOG0978@1,KOG0978@2759 |
Ec32 ortholog description | Zinc finger, RING-type |
Ec32 ortholog | Ec-06_000230.2 |
EC | 2.3.2.27 |
COG Functional cat. | A |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko01000,ko04121 |
Exons | 11 |
Model size | 1134 |
Cds size | 1134 |
Stop | 0 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816792.613394-CDS-M-pyrifera_M_contig8831:478..568 | 1622816792.613394-CDS-M-pyrifera_M_contig8831:478..568 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 479..568 - |
1692278181.3076851-CDS-M-pyrifera_M_contig8831:478..568 | 1692278181.3076851-CDS-M-pyrifera_M_contig8831:478..568 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 479..568 - |
1622816792.6278431-CDS-M-pyrifera_M_contig8831:1162..1291 | 1622816792.6278431-CDS-M-pyrifera_M_contig8831:1162..1291 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 1163..1291 - |
1692278181.3210626-CDS-M-pyrifera_M_contig8831:1162..1291 | 1692278181.3210626-CDS-M-pyrifera_M_contig8831:1162..1291 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 1163..1291 - |
1622816792.6388326-CDS-M-pyrifera_M_contig8831:2474..2552 | 1622816792.6388326-CDS-M-pyrifera_M_contig8831:2474..2552 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 2475..2552 - |
1692278181.3408291-CDS-M-pyrifera_M_contig8831:2474..2552 | 1692278181.3408291-CDS-M-pyrifera_M_contig8831:2474..2552 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 2475..2552 - |
1622816792.6493156-CDS-M-pyrifera_M_contig8831:3125..3230 | 1622816792.6493156-CDS-M-pyrifera_M_contig8831:3125..3230 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 3126..3230 - |
1692278181.3509119-CDS-M-pyrifera_M_contig8831:3125..3230 | 1692278181.3509119-CDS-M-pyrifera_M_contig8831:3125..3230 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 3126..3230 - |
1622816792.6618633-CDS-M-pyrifera_M_contig8831:4054..4141 | 1622816792.6618633-CDS-M-pyrifera_M_contig8831:4054..4141 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 4055..4141 - |
1692278181.3596582-CDS-M-pyrifera_M_contig8831:4054..4141 | 1692278181.3596582-CDS-M-pyrifera_M_contig8831:4054..4141 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 4055..4141 - |
1622816792.6771204-CDS-M-pyrifera_M_contig8831:5196..5292 | 1622816792.6771204-CDS-M-pyrifera_M_contig8831:5196..5292 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 5197..5292 - |
1692278181.3691704-CDS-M-pyrifera_M_contig8831:5196..5292 | 1692278181.3691704-CDS-M-pyrifera_M_contig8831:5196..5292 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 5197..5292 - |
1622816792.693647-CDS-M-pyrifera_M_contig8831:6401..6497 | 1622816792.693647-CDS-M-pyrifera_M_contig8831:6401..6497 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 6402..6497 - |
1692278181.3787339-CDS-M-pyrifera_M_contig8831:6401..6497 | 1692278181.3787339-CDS-M-pyrifera_M_contig8831:6401..6497 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 6402..6497 - |
1622816792.7074878-CDS-M-pyrifera_M_contig8831:7186..7313 | 1622816792.7074878-CDS-M-pyrifera_M_contig8831:7186..7313 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 7187..7313 - |
1692278181.3955946-CDS-M-pyrifera_M_contig8831:7186..7313 | 1692278181.3955946-CDS-M-pyrifera_M_contig8831:7186..7313 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 7187..7313 - |
1622816792.7188973-CDS-M-pyrifera_M_contig8831:8314..8399 | 1622816792.7188973-CDS-M-pyrifera_M_contig8831:8314..8399 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 8315..8399 - |
1692278181.41016-CDS-M-pyrifera_M_contig8831:8314..8399 | 1692278181.41016-CDS-M-pyrifera_M_contig8831:8314..8399 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 8315..8399 - |
1622816792.730068-CDS-M-pyrifera_M_contig8831:9830..9913 | 1622816792.730068-CDS-M-pyrifera_M_contig8831:9830..9913 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 9831..9913 - |
1692278181.4214349-CDS-M-pyrifera_M_contig8831:9830..9913 | 1692278181.4214349-CDS-M-pyrifera_M_contig8831:9830..9913 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 9831..9913 - |
1622816792.7409062-CDS-M-pyrifera_M_contig8831:11328..11486 | 1622816792.7409062-CDS-M-pyrifera_M_contig8831:11328..11486 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 11329..11486 - |
1692278181.4305344-CDS-M-pyrifera_M_contig8831:11328..11486 | 1692278181.4305344-CDS-M-pyrifera_M_contig8831:11328..11486 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig8831 11329..11486 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8831.20509.1 >prot_M-pyrifera_M_contig8831.20509.1 ID=prot_M-pyrifera_M_contig8831.20509.1|Name=mRNA_M-pyrifera_M_contig8831.20509.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=378bp
LRQARKRCIELSDSITSIREDCRKANRTLDKLAEDGVIVEVPSEKSASTW VSRRARGVQRGSRLSSGGMVSSYVGGIKAEGLSRGGDGADDPEDLLAALE EAQALCESRQKEIERCRAAKAEAERDLTRFKASTELDTQRSDLSGHPQFQ RLSTQLEAEQDMLKLEKARVIELEDQIKQMAAQVEQHEMALQQQMEQQRL RWKSEIVSSNSMLNTAHEDLDKAQGKLKHEQRFGSGMLKSVTIAKEEAGR LLKQTEQQVSILKASLERATKAKEHAEAQASKDRARLERQLSGSASAGRE DDNTRTKLADSLRQLEGSKAVEDALQSELNTTLAAYAQSKEGNQKLIQEM TRISASRKELSDEVTSAKAQLKNRAKVR back to topmRNA from alignment at M-pyrifera_M_contig8831:479..11486- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig8831.20509.1 ID=mRNA_M-pyrifera_M_contig8831.20509.1|Name=mRNA_M-pyrifera_M_contig8831.20509.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=11008bp|location=Sequence derived from alignment at M-pyrifera_M_contig8831:479..11486- (Macrocystis pyrifera P11B4 male) CTTCGCCAGGCGAGGAAGCGCTGCATCGAGCTGTCGGATTCTATCACGAG
CATTCGAGAGGACTGCCGCAAGGCGAACCGGACGTTGGACAAGCTTGCGG
AGGACGGCGTTATCGTGGAAGTCCCCTCGGAGAAGAGCGCATCCACCTGG
GTCAGCAGGTGATCTTGGCGCACTGTGATTGGCCAAACTAAAATACTGAA
TGGTGGAAACCTCGGGACGGAAGGACAATTAGCAATCCAACATCCGATGA
CTGAACCCCGGGGCGCAAGGACAGTGTGCAATCTGTTGATATGATTGGCT
AATCGGCGGGACGCAGGACGATGTGCAACCTGTTCAACTCATTGGCTCTG
TGTCGCTAGACGAAAATGCCGCTTGATTGATTGCCCGGGACGCGAGGACA
ATGTGCAATCCGTTGATCTGATTGGCTGAACCACGGGACGCAAGGACAAC
GTGCAATCCGTGCATCTGATTGGCTAAAGTGTGCAATGCGCGCATCTGAT
TGGCTGAGCCAGTCAGCTCGCTGTAGACATGGTCGGACCCGCGGAGTCTG
CGCATGGTGGAGATGAAGTTCGTTGGAGCTTGGGTTTGGCTTAAGGTCCT
CCTTGACCCTTTTTCGTCGTGAACGGTGAAAATTGTAACGGGACGGACTG
ACTGCAGGTGCCATTTTTTGGTGTTGGTGTTACGCACACATTTTGTTGTA
TTATGTCGGCGTTTCGAACAACGCCTCCTGAAAGAGTACAAACCCGACTC
TCTGCACTGCTCTAGAGCTTAGTGTATCATACTCTGATGTGGTTATAATA
GTAGGTTGCACTATCAGTATTGCACTATTATTCATACGTGTATGTATTAC
GGGGGACCATAGTAAATAGGACCTACGGTATACACAAAATCCCATGTATT
TACGTATTTTTTCTGACAAAAGTTTGGACCTATTTACTATTATATGGTCC
CCCGCTATAGTAAGATTGCAGTATTGGTGGATTGCAGACCGCTCGATCAA
GGCGCCACGATGCGACCCTTCACAATGGAGATGGAATGTATGAACACCCA
GCGGTTATTTGGTTGGCGTCGTTGTCATCGACATCGCCGCCATCCCCATC
ATCATCACCACCGGCACCAACGTCATCACCACCATTGTCATCAACATCCG
CCATCACGACATATTTCGGGGGTCCATAGTTAATAGGACCTATGGTATAC
ATAAAAACCTATATATTTACCTATTTTTACTAACAAAATTTGGTCCCGTT
AACTATGGACCCCCGTAATAGTCATCATAGCTGTACAGCAGTCGTTACTG
CCTGGTACGGTGGAGTTTGCGGCGGTTTCTGTCTTCTTCGACTACGTAAG
CGCATCCGGTACTAAACGAAAAGCAGTCGGAAGCTGACGCTAAGCTGCGG
ATGCCCCGCCCGTTCCACTATGTTCCGGCGGATTGACCCCCCTCCCCCTC
CTCCCTATCTCCCTCCCTCAAAACTTGAAAACCTCATATCTCCCCCTCTC
TCTCTTTCTCTCGCTTTCTCCCTTCCGTTATCTGTTTTCCGCTGACTGTT
GTTTTAATGCTTGACAACCGCAGGCGAGCTAGGGGTGTTCAACGCGGTTC
CAGATTATCTTCGGGCGGGATGGTTTCTAGCTATGTCGGAGGCATTAAGG
CAGAGGGTGAGGAAAGCGATATTTAGTTATAGTATGATTCTATGCTTTGA
AGTACGTATGTTTTCTTCGGGAATAGGGTATGTGGTTCTAGCTTTGGTTT
GGCCGTTGCGCGGTTGTTGTTGATGGTAGTGGTGTTGTTGTTTTCACAGT
ATCTCCTCGCCATAGTCTAATAACAGCGCGTGGTCACAAGAGAGGCTCCA
ATGATTATTGGGTGGAAGAAAAACAAATGAACAAGGAAAAAACGACGAAG
ATATAATCCTAAACACGGTGTAATCGACTGACCACGGCTGGAACTGGAAA
GTTTATACCGTGTGGTATATCAACTATCATGTATAATGTGTATTTCATGA
TGTGTGCCCTATAACCCGTACCTGGCTTACTGTAGCACTCTGTCTGGAAA
TATGAGGACCGCTTGGGTTTCAATGTGAATACCGACACGGTCCTTACATG
TAACTCTGCGCAGAGCGGTATGTAGCACTCACGAAAGCGTCGGCCGTTTT
CTCACTCCATCCCAGTTGGTACACGGTACTGCTGTACCATTCACTCTCTT
TCACTACGGTCCGTTTCGCTGCACGGCGTTCGACAACCAGTTTGGTTTAA
GAGCCCGAACTTACAGCTGACGAACTTCACACTTCTCTTCGAAGGATGAA
GTGTGCGCCGTCGTGCGTCAACCGTGATCGAAGACGCTGCCACTTTCGCG
GGGAAACGTTAGGACCCCTGGCGTACGAATATGGATAAGAAACGGTACTT
GGTCCTTGCGTTTGCGTACGAAGTGGTGTAAAATGTATAAACGAAGGAGA
CCGCGGTTTGACCCCTTGTACCCTTGGCTGACCGCGCCCTACACTTAATC
CTTTAGTACCGCAGTCCCTTTTGGGGGGAAAACTACATAACATTTGAGTG
GGTTGTCCCCAAGGCAGGACTGCAGTCTTAGAAGGGTTGAATTATTACGG
GGGACCATAGTAAATAGGACCTACGGTACACTCAAAAACCTATATATTTC
CCCATTTTTTTCTACGATGTTTGGTCCTATTGGACCGTAGTAAATAGGAC
TTACGGTAAACACGAAAACCAATATATTTACCCATTTTTACCAACAATAT
TTGGTCCTATTTACTATGGCCCCCCGTAGTAGTATATCAACTCTCTTGGA
ACTGTTGTCACGTTTTCGGGCATTTTCGGGCGCTGGACAAGGTAGAATTG
GCGTGTCATCGCTTTCCCAGGGGTGCAAGGGGTAAGGCCCCAACAAGACC
TTGATGTGCCCATGAAGATCGATCTCCCACGCTAGCGTTTTTGATACGTA
GTGACAGGTCGTTGTTATTGCCGATGTCCAAAGGCGATATTAATAGTCGT
TTTTGCCCTCTGGTGGTTGCCATTGCCCAATGCTAAATGCCATTGTCCGA
CGGTGAATGTCTTTGTGTTCGTCGTTGCAATTGTCAGGATTGTCGCGGGG
GGGGGACGGGGCGGACGATCCGGAGGATCTTCTCGCCGCGCTGGAGGAAG
CGCAGGCGCTGTGCGAGTCGAGGTGATAGCTTGTGTGGCTGGTGGTGCCA
TTATTCTTATGAATAGGCGTAGGACATTTATACCTGTGCATTAATGGACT
CTATCATACCTTGTTTTCTCGTTTGCCATCAGATAATAAGATGTGGTGCT
TCTTTTGGGTCATACATAACCTCGCCTGAGTGTCCACAGCTTCCATACTT
TGTTCCCTTCAAAACACGTGGTGCGCGCGATCGAAGTGTCAGTAGTGTCA
CTATTACGGGGGGCCATTGTTAATAGGACCTACGGTGCGCACAACAGCCA
TATATTTCCATAATTTTACCAAGAATATCTGGTCCTACTTACTATAGCCC
CCTGTAATCGTATCCCACGCAGCTTGCTGACATGATTTCGATAAAATCCT
CGAACTCACAGCGGTCGTTTGTTTTCATTTTATAATATACGATTCTACAA
TACATTGGCGGTAGTGTTATTTAAGTTCGCACCTTGTGCCTGCTGCGTTG
TGTTTTTGTTCAGTGAGTGTTGACAAACGCACTGGCTCTTCACAGGGAAA
CGGTACTGCGAGTATTCGTTGCTCGTGGGCGGCGCACGAACAGGCCTATT
GCAACGAGCCGAGCCCGGAGGAAGGCATTTACATCGTCCCATGATGCCGT
TGGACGCCCTCTCCCCCCCTCCCTCCCCCCCCCGGCATCAACAGCTATAC
CGCTGTCCCTATTTATTAGTACCGTTTATAAATGAATATTTAATCTCAAC
GATCCTCATAATTGAGGAGAGAGTGAAACACTCCTATGGTACGTACATTG
GACGTGTCACTTGGGCCCTCGCAAACGTCTTGCCGTGCCCTGCCCTGCTC
TGGTGACGCGCTATCGTAACCTGTACACGTGTGGCTCGTGACGTGTGACG
TGAGACGTGTGACGTGTGACGTGTGACGTGTGATGCGTGACGCGTGTCGT
GGCATGTGTGACGCGTGTCGTGCGACATGTGTGACGTGTGGCGTGTGGCG
TGTGTCTTGCTCGTGCGGTGCAGGCAGAAGGAGATAGAACGATGCAGGGC
GGCGAAAGCGGAGGCCGAGCGGGATCTGACGAGATTTAAGGCCAGCACCG
AGCTGGACACGCAGAGATCCGACTTGTCCGGACACCCCCAGTTCCAAAGG
GTGAGTGCCGCGTGCCCCTCCTGCCCTCCTACCAGACCTATATATATATC
ACTTCGAAGTACGTTTCTAGAGGTATATGTTGCAGAGCACGCAATGTCTG
CGCAAACACCCTGCAACGCCCCGTGCGGAGGGCCTGCTTACTTTTGATGG
ATGCTAGCGGGGTTGCGCGCGTTGCGTGTTGCCCTTGTGTTCATTCCCCC
CATACATCTTGCGCAATGTTGAGTGGCGATCCCCCGCTTTATGAATACCC
TGGAATTAGTTAGTGGGAGGTAAACGTTGTGTTCCTCTCTCCTTGCTATT
GGTCTGTACTCTCCGCCCATGGTCTTGCAACTGGACCTGTTTACTCCTGG
TGTGCGGAACCCTTCATCCCACCCCGCACCAGAAAACAGTCAATCCGTTC
GACGCTGTCTTCCATGTGCGAGAAAGACCGCCTCACAAGCGGTTCTTAGT
GGGATGCAGCTCGTGTTTCATGCGACTCGCCGAACACCTCTCGGCGCTTC
ACGCTTGGTGCAAGCAATGTCTGTCTGGTCGGTAAAAACCCGGCGTGCTC
CTTCCGGGTAATGTAGAGATGCGAGGGAGGGTCTATGGGCGTAAGACTAC
GGCCATGCATAACATGAGTACCCCTCTCCCCGCCCACCGGTACTCGATGC
GAAACGACGTTCGAAACATTGGGACCACACGCGTGCCAGTTGTCGACACA
ATTGGAAGCGGAGCAGGACATGCTGAAGCTGGAGAAGGCGAGGGTGATCG
AGCTTGAGGACCAGATCAAACAGATGGCTGCTCAGGTGCAGAGGAAACGA
CTTGCGCAAGATTCGGCTTGACGCTGTCAATAGTTTGTTGACCCAAGCGG
CCCCTTGTCCTGTGCAGTCGCTGTGTTGCGAAACATGCTAGCACTGCTGT
ATGGTGCTGGGTGACGGCGATGTTGCCTCCCATGCGCCTTGTTTCGGGCA
GAAGAGTTGCTTTGTCGAAGCTCCCCTACTTTTTCTGCTGGTGGAGCCCA
ACCCGCTTTCAAGGCTCCACACCCGTTTCGGGGCCAAAGTACTTGCAATT
AGAGTCAAACATGTGCTCCTGTAGAGTGCTGCACGAAAAAGAGCTAGGGG
CGGCTATTACGGGGGACCATAGTAAATGGGACCTAAAATTGTGGTTAAAA
ATAGGGAAATATATAGGTTTTTGTGTGTACCGTATGTCCTATTTACTATG
GCGCCCTGTGATACTAGGGTAGACTGCACTGACGCCCGTCCCTTGTGTTT
TTGTACCGGGTTAGCCGCACGTTGGCCGTGCGCCAGCGGACCCCCCGCGG
CACCATCGTACGCTTTGAAAGTTGCTTGTGTGTATCGTAGGGTCGCTTTG
TTGCGCTGCGAGGGGCGCGGTCACGTGTGTGCGTGTGTGCGTGTATTTCA
CGTCGAACCGTGATTTCCACCCATAGGCACACCCAATCGTAGTGCATGCA
ATGCTTTCATCCTATAGAGATGACCGGCTGAAAAGTGATTGTTGTTGAAA
AATGGCTGTTGCTACAGTAAGTCGCTCTCATCTCATCACACGACCACGGC
ACGGGCACTGGAATACACAATCGGTGCATAACGTACGTTCAGTCGTGTGT
TCGCGAGGTGCCTTTTGCAGCCGACAAAACGCCTTCATGTTTGTGTACAC
CTGGTATGATCCGCCACGTACGTGTCTGTCGGGAATTGTATGATTCGTTT
TGATACTACAGTAGTACGAATAGCTAAACATTCCTGACATATTCGGACGT
GGTGGTATACGCACTGCTGTAGCTACTGTGTCTTCCTTCACCCATGCTAT
ACTTCGTGTACACGCGGTGTGTACTTGGTTTTTTGCTGTCTGTTCCCCTG
TTTTCTTGGGATGGTGCGACCTTTCTGTCGCGCCCGATGGATAGGTCGAG
CAGCACGAGATGGCGCTGCAGCAGCAGATGGAGCAGCAGCGCCTTCGCTG
GAAGTCGGAAATCGTGTCCAGCAACAGCATGCTCAACACGGTGGGTGGGC
TCTGGGTATCGATGCCGGCCTCTATTGTGCGAGGACGCTATTGCTGGTCA
CCCTGTCTCGCCTTCCCCCCCCAGCTCGCCCGCCAACCTCGTGTGGTCGG
TTCGGCGGTTTCAGACCTTCCGCGTGTTGCGATCGCCGGCTGTTATTGAG
AGCGGTGCAGTGCGGAAGCGACCGCGCTCACAGTAGGAGTAGAGCTTGGC
AGTAGGGCTTGGCAGTAGGATTTAGCTCAATAGGACTTGACGGTAGGAGT
ACGGCTTGACAGTAGGACTCGGCAGTAGAAGCAGGACTTGGCAGTAGCAC
TTGGCGGCTTGAAGGAGTAGGGCTTGGCAGTTGGACTTGGCAGTAGGAGT
ACGACTCGGCAGTAGGACTTGGCAGTAGAAGTAGGGCTTGGCAGTGGTAG
TAGGACTTGACAGTAGCGCTTGGCGGCTTGGCAGCGGAACATGGCAGTGA
GCGGAGGGGGAGGGCGCAAACGCGCAAACTCCAGACGCGATGGTCGTCCG
AAGTTGATGTGTCTCGGGTCTGCACGAACGTGGGGCAGGCATGTTCCCCG
TCTCCGTCTCTCGCTGTCTCTGCCCCAGGCGTGCCGTCACTGCTGTTGTT
GTGCGGTTTGGTGGGGCGTGGGAGGGCCTGCTGTAGTACCTGGTGTGCTG
GACACGGAGCCCCGCGCTTTCTCTAGTGCTGATGTTCCCAAAAGTAAGGA
TAGGGTTTGCTCTATAGCCTGCAGGGTTCTATGTACGAAGGGCGTGTCCG
TGTGTATACTGCTGTACAGTAATCCGTATTGTATGTGTGAACTCTCGCTG
GCGGTTTTGTAGCATGCTGCCGGTATTCATGGTGATAAAATGCCGATGAA
TAATGCTGTTATGATAGCGATGTCATCAGGAGTATTGCATTGTTTCGTGC
TTGTATTATAGCTCTACTATTTGTTCATAGTGTTGACTGTAATCACAGCA
GTGTTCATAGCTGTATCATACCCTCCTGCTTGATCTTCGTGTTTCGTGGG
TGGAAAAATGGATGGCTTAACTGCAAAAATAATGCATTTTGGCAGGCGCA
CGAAGACCTGGACAAGGCGCAAGGCAAGCTCAAGCACGAGCAGAGATTCG
GGTCTGGCATGCTCAAGAGTGTCACCATCGCGGTAAGCCGCCTCACCGAC
CTCTAGCTAAGCACTCCACTACTGTATGGACACCACCCACGACGATAAAA
CTGCTATTACGGGGGTCCATAGTTAATAGGACCTACGGTATACATAAAAA
CCTATATATTTACCTATTTTAACCAACAATATTTGGTCCTTTTTACTATG
GTGTCATGTAATAGTGCACGAAAAACGCAGGGCTATTTCCGTGGCTCGTT
TCAGCATCGATAGACTGATACCTAGTGCCGCTCTGACGGAAAATATAATC
ACCGCTTGGACTTTGGGTATGAGCATCAATTGGAGCTCATGTTCCCGGCG
ATCGCGGTACTTTTGTACCTGGTATATACGTGGACATTGCGCTTTTCTGA
TGGCTCCTGGTATTCCCGCTCGCACGTGGTGGTGGTGGTAGTAAAGTGGT
GGGACACGTTGTTGTACGAGAGCAAGTCGTCGTCGAGGAAGTCAGATTGT
ACCCGAGCAAGGTGGGGGCCGATTGGAAACCCCAGGCGCTTTTTTGCGCG
CTTCAATTTGAAAGGGATGTAGCATTCGTCTCAGGATTGGCCAATGGCGA
GGCGCTTCGATGCTGCTGTTTGGTAATGTTGCGGGCTGTGGGGGCAGAAG
CTGAACAATCCAAGAGTCCATGTCGAATCTCTCTATGGTTTTCACCCATG
GCCCGTGATCTACGCGTAGCACTTGCTGGTACAACTCATTCTCCGATTTT
GCACGTTTTTATTGTACTGTGTGTACACCTCATTCTCCGATGTTGCATGC
TATATTGTACTGTGCAACTCATTCTACGATGTTGCATGTCTTGTTGGGTG
TTGCAGAAAGAAGAGGCCGGGCGTCTTCTGAAGCAGACAGAGCAGCAGGT
TTCCATTCTAAAGGCGTCTTTGGAGAGGGCCACCAAGGCCAAGGAGCACG
CAGAGGCCCAGGTCGGTGTGGCCACACGGTCCGTTTCTACATATATTTTG
TATGTCTTTCGCTTGTTTGGAGGATAGAAGCTGACTTACGGTCAACGTCG
AGCGTTTTCGCGCACGGTTGTTGGTCACGTCCTGCTCACCATGGAGGAAC
TGCAGACACGCAGAATGGTGCAGAGCTTCATGGATTGACTGCTTTTTTCA
CGGGTCGGGTCAAACCTCGCGGGTGATGTCGAGTCGGGTCGGATGACGGC
GACCGGACCCGATCCGTGAGAATGTGAAAACCTCCTTACCCGACCCGACC
CGACGTGTTAGGTTTCAAAAACTTCCTGACCCAATTCGAGGGTTGGCGCA
TTGGCCCGTGAAAAGCCCCGGTGATTTTGCGCTGAACTTTTCGTGTCTCG
TCCCGTTTTTTATAGTGCGAAATCATGTCCCACACTACTTCCATGTTTTG
TCCCAGTATCGTATGCAGCAAGTATGCTGATGCATTTTTCAGGTGCGATG
TGTTATGTTGTATTCATATATATATATATAGCTCACCGTGGGTGCATTTG
TCTGGGTGCTGTATTTTTGTGGTGATTCTGCCAGGCTTCGAAAGACCGCG
CGCGCTTGGAGCGACAGCTGTCAGGCTCGGCCTCTGCAGGGCGGGAGGAC
GACAACACCAGGGTGAGAAGTACAAGGCACCGTCTTTTCTTGACGCCGTT
GCTGGTTGTTGTAGGTGTTGGTGGTGTTGGTGGTGGTGTGGGTGGTGGTG
ATGGTCGTGGTCGTGATGGTCGTGGTGTTGGTGGTGTTGGTGGTCGTGGT
GGTCGCCGACGTGTTGGTGCTGTTTTCATTTTTGAAGAATTGCTCGTGTT
GGCGGGTGGTGATGGTGATCGTCTGGTGTGCCCAACGGGTGTTGTGTACG
TCGAACTGCGTGGCACTTTTTTTCGCTTTTGGGCCTACTATTAGGTAGAA
TACACCGAAAAAGGGTCTGTGGTCGCGCTGTTGGGGCCTCAACATGTGTA
CCGGGGTACAAGTGTACCTGATATGGTATGGTACAGTGGTGCGATACGTA
TGACCGAATAACCCGGTCCCTTAGGGCAAGCATGGAGCAACAAAGACGTC
TAGGTATTTGTTGTCTTGGAAGCGTTAAGCAACATGGCCAACGGCATGAC
CGACGGCATGACCGACGGCATGACAGACGGCACGTCAGACGACGTGACCG
ACAGCGTGACCGACGGCATGGCAGACAACACGGCAGACGGCACGGTAGAC
GGCATGAAAAATGGCGTGGCAGAGGCATGGCTAGTGGCATGGCAGACAGC
ATGGCTGACGGCATGACCCACGGCATGGGAAACAGCATGACTGACGGCAT
GACAATGACAAACGACGTGACCCACGGCATGTCCGACGGCATGACAGATA
TCATGACTGACGGCTTGACAAAGCTTTTCTGACGGCATGACTGACGAATG
GCATCGTTTGAGCGTGCCGGGTCTTCTACCCCGCCAGGAGCTTCGCTTGA
CGCGTGCTTGGTGCTGTTCCGACCTGCCACGACTCGCATGCCCCAACGTT
GTCCGGCATCGTTTACCATGTGCTGCAGTAGGCTACTCCAAGTACATGTG
TACATAACTTGGAGTTTTGTCGTTTTCTGGCGAAACCTCGATTCTCAGGC
GTAATACCTTCTGTAGCACTAACATCTGCAGCACCGATTGAATGTACTAA
TACCAAATGGATGTCCGAAAACCGCATTGGTGCCCGAATACCGAATGATG
TTCGAATAACGAATGGATGTCCGAATACCGAATGGATGCCCGAATACCGA
ATTAATGTCCGAATACCGCATGAATGTCCGAATGCCGAATGTAAGACGAA
GCTGGCGGACTCCCTCCGGCAACTGGAAGGGTCGAAGGCTGTCGAGGATG
CCTTGCAGTCCGAGCTCAACACCACGTTGGCCGCGTATGCGCAGTCAAAG
GAGGGCAACCAAAAGCTCATCCAGGTGAAATAGCCACCTACATTTGTCGT
TTCCGCGAGGGGGTAGAAAGTGAGCATCGTGAAGGTTTTGCTTTAACATC
GTCTAGCCTTCGGATTTGTAAAGTGGTAGGGTGCTGCGCCTTAAGGTACT
GTTGTAGCTTCGAGTGTAGACTGGAAGGGAGGGGGAAAGGGAGGGGAGGG
GGGGGGAGAAGGAGCTGAGTGGAGGAAATAATTGAGGGAAAATGGTGATT
CGAAATATGATGTCGTGCCCTTTGTTTTAGGCCAGGTAAGACAGGTGAAG
CGATCCCCGGAGAGTTGTCGGTTGGCGTGTACAGCAGCCTGAAAAAATGC
GTCGCAGAGTACTGAAATCAATTTCAATCGAATCAATAAATATTCGTCGC
GGTATTATACCTTCGTGTATCTGTCGATAATAGACTTATATTTATCGATG
CACGGCTGCAGTGTACATCTATTCGCACCTCGAGCACCCAAGTGAAGCGA
ATGTGGTATTTGGTAGAGTGGTTGGGTGGCATACGGTGGCGATTGCGCTT
GTGTCCGACGGGAACGCTGCTGTTACCGCTCTGCTGCGCATGCATGCCTT
GTCATTGTCCTTTCGCAGGAGATGACCCGCATTAGTGCCAGCCGGAAAGA
ACTGAGCGACGAGGTCACCTCGGCAAAGGCGCAGCTCAAGAATCGCGCCA
AAGTCAGG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig8831:479..11486- >mRNA_M-pyrifera_M_contig8831.20509.1 ID=mRNA_M-pyrifera_M_contig8831.20509.1|Name=mRNA_M-pyrifera_M_contig8831.20509.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2268bp|location=Sequence derived from alignment at M-pyrifera_M_contig8831:479..11486- (Macrocystis pyrifera P11B4 male) CTTCGCCAGGCGAGGAAGCGCTGCATCGAGCTGTCGGATTCTATCACGAG CATTCGAGAGGACTGCCGCAAGGCGAACCGGACGTTGGACAAGCTTGCGG AGGACGGCGTTATCGTGGAAGTCCCCTCGGAGAAGAGCGCATCCACCTGG GTCAGCAGCTTCGCCAGGCGAGGAAGCGCTGCATCGAGCTGTCGGATTCT ATCACGAGCATTCGAGAGGACTGCCGCAAGGCGAACCGGACGTTGGACAA GCTTGCGGAGGACGGCGTTATCGTGGAAGTCCCCTCGGAGAAGAGCGCAT CCACCTGGGTCAGCAGGCGAGCTAGGGGTGTTCAACGCGGTTCCAGATTA TCTTCGGGCGGGATGGTTTCTAGCTATGTCGGAGGCATTAAGGCAGAGGG CGAGCTAGGGGTGTTCAACGCGGTTCCAGATTATCTTCGGGCGGGATGGT TTCTAGCTATGTCGGAGGCATTAAGGCAGAGGGATTGTCGCGGGGGGGGG ACGGGGCGGACGATCCGGAGGATCTTCTCGCCGCGCTGGAGGAAGCGCAG GCGCTGTGCGAGTCGAGGATTGTCGCGGGGGGGGGACGGGGCGGACGATC CGGAGGATCTTCTCGCCGCGCTGGAGGAAGCGCAGGCGCTGTGCGAGTCG AGGCAGAAGGAGATAGAACGATGCAGGGCGGCGAAAGCGGAGGCCGAGCG GGATCTGACGAGATTTAAGGCCAGCACCGAGCTGGACACGCAGAGATCCG ACTTGTCCGGACACCCCCAGTTCCAAAGGGCAGAAGGAGATAGAACGATG CAGGGCGGCGAAAGCGGAGGCCGAGCGGGATCTGACGAGATTTAAGGCCA GCACCGAGCTGGACACGCAGAGATCCGACTTGTCCGGACACCCCCAGTTC CAAAGGTTGTCGACACAATTGGAAGCGGAGCAGGACATGCTGAAGCTGGA GAAGGCGAGGGTGATCGAGCTTGAGGACCAGATCAAACAGATGGCTGCTC AGTTGTCGACACAATTGGAAGCGGAGCAGGACATGCTGAAGCTGGAGAAG GCGAGGGTGATCGAGCTTGAGGACCAGATCAAACAGATGGCTGCTCAGGT CGAGCAGCACGAGATGGCGCTGCAGCAGCAGATGGAGCAGCAGCGCCTTC GCTGGAAGTCGGAAATCGTGTCCAGCAACAGCATGCTCAACACGGTCGAG CAGCACGAGATGGCGCTGCAGCAGCAGATGGAGCAGCAGCGCCTTCGCTG GAAGTCGGAAATCGTGTCCAGCAACAGCATGCTCAACACGGCGCACGAAG ACCTGGACAAGGCGCAAGGCAAGCTCAAGCACGAGCAGAGATTCGGGTCT GGCATGCTCAAGAGTGTCACCATCGCGGCGCACGAAGACCTGGACAAGGC GCAAGGCAAGCTCAAGCACGAGCAGAGATTCGGGTCTGGCATGCTCAAGA GTGTCACCATCGCGAAAGAAGAGGCCGGGCGTCTTCTGAAGCAGACAGAG CAGCAGGTTTCCATTCTAAAGGCGTCTTTGGAGAGGGCCACCAAGGCCAA GGAGCACGCAGAGGCCCAGAAAGAAGAGGCCGGGCGTCTTCTGAAGCAGA CAGAGCAGCAGGTTTCCATTCTAAAGGCGTCTTTGGAGAGGGCCACCAAG GCCAAGGAGCACGCAGAGGCCCAGGCTTCGAAAGACCGCGCGCGCTTGGA GCGACAGCTGTCAGGCTCGGCCTCTGCAGGGCGGGAGGACGACAACACCA GGGCTTCGAAAGACCGCGCGCGCTTGGAGCGACAGCTGTCAGGCTCGGCC TCTGCAGGGCGGGAGGACGACAACACCAGGACGAAGCTGGCGGACTCCCT CCGGCAACTGGAAGGGTCGAAGGCTGTCGAGGATGCCTTGCAGTCCGAGC TCAACACCACGTTGGCCGCGTATGCGCAGTCAAAGGAGGGCAACCAAAAG CTCATCCAGACGAAGCTGGCGGACTCCCTCCGGCAACTGGAAGGGTCGAA GGCTGTCGAGGATGCCTTGCAGTCCGAGCTCAACACCACGTTGGCCGCGT ATGCGCAGTCAAAGGAGGGCAACCAAAAGCTCATCCAGGAGATGACCCGC ATTAGTGCCAGCCGGAAAGAACTGAGCGACGAGGTCACCTCGGCAAAGGC GCAGCTCAAGAATCGCGCCAAAGTCAGGGAGATGACCCGCATTAGTGCCA GCCGGAAAGAACTGAGCGACGAGGTCACCTCGGCAAAGGCGCAGCTCAAG AATCGCGCCAAAGTCAGG back to top
|