mRNA_M-pyrifera_M_contig88285.20506.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88285.20506.1
Unique NamemRNA_M-pyrifera_M_contig88285.20506.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Match: A0A2E7KHI9_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KHI9_9PLAN)

HSP 1 Score: 530 bits (1365), Expect = 1.690e-182
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1
Query:    1 EVASDSMAHSDLTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDRLISTSEDARIGFYVKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDISM 819
            EVASDSMAHSDLTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDRLISTSEDARIGFYVKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDISM
Sbjct:  442 EVASDSMAHSDLTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDRLISTSEDARIGFYVKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDISM 714          
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Match: A0A6I6A4M0_9PLAN (PAS domain S-box protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6A4M0_9PLAN)

HSP 1 Score: 363 bits (933), Expect = 1.250e-117
Identity = 179/273 (65.57%), Postives = 226/273 (82.78%), Query Frame = 1
Query:    1 EVASDSMAHSDLTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDRLISTSEDARIGFYVKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDISM 819
            +++SDS AH+DL QS+TAI RA +LT QLLRFSR++EVEK  C+  ++I+DL+VLLRPLLPENI+++Y+L+  LP I+ANPL+LGQ+LLNLC+NSRDAMP+GGTITIG+RLI++ +   IGFYV+D G GIPE +QDRIFDPFFTTKEVGQGTGLGL+MVYSTA+EH GS+ FES PG+G RFE++IPV+ +N  P   +  D  D+K T      +KSILVAEDDSIVMRVT RMLENLG+ V S NNGR A+E+YR+ER++I CLVFD+ M
Sbjct:  442 DISSDSQAHTDLNQSLTAISRATQLTNQLLRFSRIDEVEKYECNSLSIIEDLKVLLRPLLPENINVDYQLNGTLPLIIANPLLLGQSLLNLCLNSRDAMPAGGTITIGNRLITSQQKTFIGFYVQDNGLGIPEYLQDRIFDPFFTTKEVGQGTGLGLSMVYSTAQEHRGSIEFESLPGQGARFELLIPVISDNHQPEDSNQTDSVDMKNTN-----IKSILVAEDDSIVMRVTCRMLENLGHQVFSTNNGREALEMYRQERDNIHCLVFDVCM 709          
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Match: A0A355GHJ5_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355GHJ5_9PLAN)

HSP 1 Score: 357 bits (917), Expect = 3.200e-115
Identity = 182/273 (66.67%), Postives = 222/273 (81.32%), Query Frame = 1
Query:    1 EVASDSMAHSDLTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDRLISTSEDARIGFYVKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDISM 819
            E+++ + A+SDLTQ +TA+ RA +LT QLLRFSRVEEV+K  C+   +I DLRVLLRPLLPE+I LE+EL   LP I+ANPL+LGQALLNLCMNSRDAMP GGT+TIG+RLI+  ++A IGFYVKDTG GIPE IQDRIFDPFFTTKEVG+GTGLGL+MVYSTA+EH G V + S+PG+G RFEI+IPV+ E D+ T    +D  D+ A  +    VKSILVAEDDSIVM VT+RMLE LGY VL+ANNG  AVE+YR+E++ I CL+FD+SM
Sbjct:  442 EISTSTQAYSDLTQCMTAVKRAVQLTDQLLRFSRVEEVQKSKCNSLIIIKDLRVLLRPLLPESIKLEFELDSTLPPILANPLLLGQALLNLCMNSRDAMPVGGTLTIGNRLITAQQEAWIGFYVKDTGFGIPEYIQDRIFDPFFTTKEVGEGTGLGLSMVYSTAQEHEGRVEYASQPGKGARFEILIPVIKETDSLTRHPQMDLVDVNANMSNVSHVKSILVAEDDSIVMLVTLRMLETLGYQVLTANNGWEAVEIYRQEKDRIDCLLFDVSM 714          
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Match: A6C8M7_9PLAN (Putative histidine protein kinase n=6 Tax=Planctomycetaceae TaxID=126 RepID=A6C8M7_9PLAN)

HSP 1 Score: 309 bits (792), Expect = 1.260e-96
Identity = 163/275 (59.27%), Postives = 209/275 (76.00%), Query Frame = 1
Query:    1 EVASDSMAHSDLTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDRLISTSEDAR--IGFYVKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDISM 819
            E+   S A+SDL++SI AIDRA +LT QLL FSR++ + KI C+P +VI+DL+ LL+PL+P+ I+L +EL+  LP I AN L+LGQA+LNLC+N+RDA+P GGTITIG RLI TSE  R  IGFYV D G GIP+ IQDRIFDPFFTTKEVG+GTGLGL++VYS A EH G V FE+  G+GTRFEI+IP   +      +   D  ++   ++ S   K+IL+A+DDSIV  VTVRML NLGY +++A+NGR AVE+YRRER +I+ LVFDISM
Sbjct:  442 ELNPQSSAYSDLSESIFAIDRAVQLTQQLLHFSRIDNIAKIKCEPDDVIEDLKNLLKPLMPDKINLNFELALSLPPIRANTLILGQAILNLCLNARDAIPDGGTITIGTRLI-TSETGRDQIGFYVIDPGTGIPDEIQDRIFDPFFTTKEVGKGTGLGLSIVYSAAYEHEGKVEFETTVGKGTRFEIVIPQYYQKSETNLEKGADEQELYLEKDTSLNNKTILIADDDSIVTLVTVRMLHNLGYQIITASNGREAVEIYRRERHNIQGLVFDISM 715          
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Match: A0A517V7X3_9PLAN (Wide host range VirA protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V7X3_9PLAN)

HSP 1 Score: 256 bits (655), Expect = 2.180e-77
Identity = 138/237 (58.23%), Postives = 181/237 (76.37%), Query Frame = 1
Query:    1 EVASDSMAHSDLTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDRLISTSEDAR--IGFYVKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIP-VVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTV 702
            E+   S A+SDL++SI AIDRA +LT QLL FSR++++EK  CDP NVI DL  LLRPL+P+ I+L++EL+  LP I+ANPL+LGQA+LNLC+N+RDAMP+GGTIT+G RLI TS+  R  IGFYV D+G GIPE IQ+RIFDPFFTTKEVG+GTGLGL++VYS A EH G V+FE+  G+GTRFEI+IP    +++T   +   D+ ++   ++ S   K+IL+  DDSI   VTV
Sbjct:  442 ELTPQSAAYSDLSESILAIDRAVQLTQQLLHFSRIDDIEKKICDPDNVIADLNNLLRPLIPDKINLKFELASSLPSIMANPLILGQAILNLCLNARDAMPAGGTITVGTRLI-TSKIGRNQIGFYVLDSGTGIPEKIQERIFDPFFTTKEVGKGTGLGLSIVYSAAYEHEGKVDFETTAGKGTRFEIVIPEFYQKSETNLEKDAFDQ-ELFLEKDLSSKNKTILITADDSISTLVTV 676          
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Match: A0A7C7R1K7_9PLAN (Response regulator n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7R1K7_9PLAN)

HSP 1 Score: 189 bits (481), Expect = 7.320e-53
Identity = 111/280 (39.64%), Postives = 162/280 (57.86%), Query Frame = 1
Query:   22 AHSDLTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRV---LLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDRLISTSE-------DARIGFY----VKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDISM 819
            AH DL Q + A+DRAA LT+QLLRFSR E +E+   +  N+ D +R+   +LRPL+ E+I +E  L   +  + A+P  L Q LLNLC+N+RDAMP GG +TI  R +  ++       D   G Y    V DTG G+P  ++DR+F+PFFTTK VG+GTGLGLA+VY    +H G+++  S PG GT F I +P   E+   T+            ++     ++IL+ EDD++V  V  R+L   GY VL A +G   V ++      +  ++ D+ M
Sbjct:  200 AHQDLEQVVAAVDRAASLTSQLLRFSRAETLER---EHLNLNDTVRIVIKMLRPLIGEHIDVEAHLGEDVCPVYADPGSLQQVLLNLCINARDAMPLGGKLTITTRTVVITDAESENYPDIGPGVYASIAVTDTGCGMPPEVKDRVFEPFFTTKGVGKGTGLGLAIVYGVVRQHKGTIDVYSEPGRGTTFRIYLPASHEDVAATASG--------GHEDVPGGTETILIGEDDAVVREVAARVLRRAGYTVLEAQDGDEVVRMFDEHGRRVSLVLLDVVM 468          
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Match: A0A2D5SC20_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D5SC20_9PLAN)

HSP 1 Score: 183 bits (465), Expect = 6.240e-51
Identity = 108/288 (37.50%), Postives = 164/288 (56.94%), Query Frame = 1
Query:    1 EVASDSMAHSDLTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITI-----------GDRLISTSEDARIGFY----VKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDISM 819
            E++ D+  H DL  ++ A+DRAA++T QLL FSR +  +K   +   ++     ++RP+  E I ++ +LS +   + A+  ++ QALLNLC+N+RDAMPSGG + I           G    +   + + G Y    V DTG G+P  + DR+FDPFFTTKEVG+GTG+GLAMV+ T + H G+V  ES  G+G+ F I +PV  +    T Q   +      T +     ++IL+AEDD +V    VR+L   GY V+ A +G  AV  + +  + I+  V D+ M
Sbjct:  155 ELSVDAQPHRDLQYAVEAVDRAAEITRQLLNFSRQQPAKKSHQEVNEIVTMTLRMVRPVFGEQIEVDVDLSDEAGIVYADVDIMSQALLNLCINARDAMPSGGRLRITTDQREILDRRGGNASTGQPNLKPGHYSVITVADTGCGMPAKVIDRVFDPFFTTKEVGKGTGMGLAMVFGTLQNHEGTVTVESSEGQGSTFRIWLPVAAQATNDTQQPTKNSGASSLTGS-----ETILLAEDDPMVRDAAVRVLRAAGYTVIVAADGEDAVRKFEQNADTIQMAVLDVVM 437          
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Match: A0A2H5W397_9BACT (Sensor kinase CckA n=1 Tax=bacterium HR10 TaxID=2035405 RepID=A0A2H5W397_9BACT)

HSP 1 Score: 179 bits (453), Expect = 2.450e-50
Identity = 110/271 (40.59%), Postives = 155/271 (57.20%), Query Frame = 1
Query:   34 LTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDR---------LISTSEDAR--IGFYVKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDI 813
            L Q +T   RA  L  QLL   R EE  + TC    ++ D    LR  +PE+I +E +L+P+   I ANP+ + Q LLNL +N+RDAMP GG + I            LI T    R  +   V DTG GI  +I  RIFDPFFTTK  G GTGLGL++V      +GG +  ES PG+GT F I  P+V+E   PT++   D  +    Q  +   +++L+ EDD  ++R+   +LE LGY VL A++GR A+EVY R RE+++ ++ D+
Sbjct:   47 LHQVLTLSQRARDLVRQLLLLGRPEESTERTCALNALVKDFAAFLRRTIPESIQIELDLAPEAITIEANPIHVQQVLLNLILNARDAMPQGGRLRIHTERVWPETFRALIRTRVQHRPYVRLSVSDTGAGITPDILPRIFDPFFTTK--GTGTGLGLSIVREIVHSYGGWIEVESEPGQGTSFHIFWPIVEE---PTARASTDAEE----QIPAGGGETLLLVEDDPTILRLGQSLLERLGYRVLIAHDGREAIEVYARHREEVRLVLLDV 308          
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Match: A0A356TAT0_9DELT (Histidine kinase n=2 Tax=Myxococcales TaxID=29 RepID=A0A356TAT0_9DELT)

HSP 1 Score: 183 bits (464), Expect = 5.350e-50
Identity = 106/267 (39.70%), Postives = 159/267 (59.55%), Query Frame = 1
Query:   52 AIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDRLISTSED-------ARIGFY----VKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDISM 819
            A +RAA+LT QLL +SR + + K   D   ++  L +LLR ++PE+I + +E S  L  + A+   L Q L+NLC+N+RDAMP GG +TI    ++  E         R G +    V DTG G+   ++ R+F+PFFTTK +G+G GLGL+M Y   + HGG ++  S+PG+GT FE+ +PV        S+H V   + K+        ++ILVAED+S+V RV VR+LE  GY VL + +G  A+EV+     D++ L+ D+ M
Sbjct:  296 AANRAAELTRQLLTYSRQQPLSKSRVDFDVMMRQLLLLLRRVIPESIEVVFEGSDALDPVDADRSQLEQVLMNLCLNARDAMPKGGRLTIETESVTVDETFSRTHPTVRPGRFLRVAVSDTGMGMSRAVRRRVFEPFFTTKPLGEGNGLGLSMAYGIVQRHGGIIDVSSKPGKGTTFELYLPV--------SRHPVTSVEPKSEVQSEGGGETILVAEDESMVRRVVVRILERAGYRVLESGSGLEAIEVFEAH-PDVELLLLDVVM 553          
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Match: A0A7C2TNA5_9BACT (Hybrid sensor histidine kinase/response regulator n=2 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7C2TNA5_9BACT)

HSP 1 Score: 183 bits (465), Expect = 1.100e-49
Identity = 111/277 (40.07%), Postives = 160/277 (57.76%), Query Frame = 1
Query:   40 QSITAID----RAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLLRPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTITIGDRLISTSED------------ARIGFYVKDTGPGI-PENIQDRIFDPFFTTKEVGQGTGLGLAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFDIKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEVYRREREDIKCLVFDISM 819
            QS+ AI+    RAA+LT+QLL FSR      +  +  +V++ L  LLR     ++ +  EL+P L  +  NP  L QAL+NLC+N+RDAMP GG +T+    ++ S D              +G +V DTG GI PE I  RIFDPF+TTKEVG+GTGLGLA+VY   +  GG ++ ESRPG+GT F + +P   E  TP           +  +  S+    IL+ +D+  V RVT  +L   GY VL A++G  A+E YR+ + +I  ++ D++M
Sbjct:  369 QSLQAIEEAARRAAELTSQLLLFSRPSTAPPVLVNVNDVVERLVRLLRGSFDTSVHVRTELAPNLRAVYINPAHLEQALMNLCVNARDAMPEGGQLTLRTENVTLSPDHPRVRAGEVLAGEYVGIWVSDTGVGIAPEQIS-RIFDPFYTTKEVGKGTGLGLAVVYGVVKNVGGFIDVESRPGQGTTFALYLPAASEALTP-----------EVAEEPSRARPLILLVDDEPAVRRVTTLILTRHGYDVLLASDGVEALETYRKRKGEIALVILDVTM 633          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88285.20506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KHI9_9PLAN1.690e-182100.00Uncharacterized protein n=5 Tax=Gimesia TaxID=1649... [more]
A0A6I6A4M0_9PLAN1.250e-11765.57PAS domain S-box protein n=1 Tax=Gimesia benthica ... [more]
A0A355GHJ5_9PLAN3.200e-11566.67Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
A6C8M7_9PLAN1.260e-9659.27Putative histidine protein kinase n=6 Tax=Planctom... [more]
A0A517V7X3_9PLAN2.180e-7758.23Wide host range VirA protein n=1 Tax=Gimesia algae... [more]
A0A7C7R1K7_9PLAN7.320e-5339.64Response regulator n=1 Tax=Planctomycetaceae bacte... [more]
A0A2D5SC20_9PLAN6.240e-5137.50Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A2H5W397_9BACT2.450e-5040.59Sensor kinase CckA n=1 Tax=bacterium HR10 TaxID=20... [more]
A0A356TAT0_9DELT5.350e-5039.70Histidine kinase n=2 Tax=Myxococcales TaxID=29 Rep... [more]
A0A7C2TNA5_9BACT1.100e-4940.07Hybrid sensor histidine kinase/response regulator ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88285contigM-pyrifera_M_contig88285:2..820 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score310.1
Seed ortholog evalue1e-81
Seed eggNOG ortholog344747.PM8797T_30247
KEGG koko:K02030
KEGG TC3.A.1.3
KEGG ModuleM00236
Hectar predicted targeting categoryother localisation
EggNOG free text desc.sensory box sensor histidine kinase VC1084 imported
EggNOG OGs2J04C@203682,COG4191@1,COG4191@2
COG Functional cat.T
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko02000
Exons1
Model size819
Cds size801
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816792.4798367-CDS-M-pyrifera_M_contig88285:1..8021622816792.4798367-CDS-M-pyrifera_M_contig88285:1..802Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88285 2..802 -
1692278181.2423985-CDS-M-pyrifera_M_contig88285:1..8021692278181.2423985-CDS-M-pyrifera_M_contig88285:1..802Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88285 2..802 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816792.4934447-UTR-M-pyrifera_M_contig88285:802..8201622816792.4934447-UTR-M-pyrifera_M_contig88285:802..820Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig88285 803..820 -
1692278181.2641773-UTR-M-pyrifera_M_contig88285:802..8201692278181.2641773-UTR-M-pyrifera_M_contig88285:802..820Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig88285 803..820 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88285.20506.1prot_M-pyrifera_M_contig88285.20506.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88285 2..802 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88285.20506.1

>prot_M-pyrifera_M_contig88285.20506.1 ID=prot_M-pyrifera_M_contig88285.20506.1|Name=mRNA_M-pyrifera_M_contig88285.20506.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp
MAHSDLTQSITAIDRAAKLTTQLLRFSRVEEVEKITCDPQNVIDDLRVLL
RPLLPENISLEYELSPQLPQIVANPLVLGQALLNLCMNSRDAMPSGGTIT
IGDRLISTSEDARIGFYVKDTGPGIPENIQDRIFDPFFTTKEVGQGTGLG
LAMVYSTAEEHGGSVNFESRPGEGTRFEIMIPVVDENDTPTSQHVVDRFD
IKATQNRSKTVKSILVAEDDSIVMRVTVRMLENLGYHVLSANNGRAAVEV
YRREREDIKCLVFDISM
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mRNA from alignment at M-pyrifera_M_contig88285:2..820-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88285.20506.1 ID=mRNA_M-pyrifera_M_contig88285.20506.1|Name=mRNA_M-pyrifera_M_contig88285.20506.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=819bp|location=Sequence derived from alignment at M-pyrifera_M_contig88285:2..820- (Macrocystis pyrifera P11B4 male)
GAAGTCGCCTCCGATTCTATGGCTCATTCCGATCTGACCCAGAGTATCAC CGCCATTGATCGTGCCGCAAAACTCACGACACAGTTGCTGCGATTCAGCC GCGTTGAGGAAGTGGAAAAAATCACCTGCGATCCTCAGAATGTGATTGAC GATTTGCGCGTGCTGCTTCGTCCCTTGCTCCCCGAAAACATCTCGCTCGA GTATGAACTCTCTCCCCAGTTACCTCAAATTGTGGCGAATCCACTTGTCC TGGGGCAGGCACTGCTCAACCTCTGCATGAACTCGCGCGACGCCATGCCG TCCGGAGGCACCATCACTATCGGCGATCGGTTGATCAGCACATCAGAAGA CGCCAGGATCGGCTTCTATGTCAAAGACACCGGTCCAGGCATCCCGGAGA ATATCCAGGACCGGATTTTTGATCCCTTCTTCACCACTAAGGAAGTCGGG CAGGGGACCGGTCTGGGGCTGGCGATGGTTTATTCCACCGCTGAAGAACA TGGGGGCAGTGTCAACTTCGAATCCCGACCGGGTGAAGGGACCCGCTTTG AAATCATGATCCCTGTCGTCGATGAAAACGATACCCCCACTTCACAACAT GTCGTCGATCGCTTTGATATCAAAGCCACCCAGAATCGCTCAAAAACGGT GAAATCGATCCTGGTCGCAGAAGACGATTCGATCGTCATGCGGGTTACCG TCCGCATGCTGGAGAACCTGGGATATCATGTGCTTTCCGCAAATAATGGC AGGGCAGCCGTGGAAGTCTACCGCAGGGAACGGGAAGACATTAAATGTCT TGTTTTCGACATCTCGATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88285:2..820-

>mRNA_M-pyrifera_M_contig88285.20506.1 ID=mRNA_M-pyrifera_M_contig88285.20506.1|Name=mRNA_M-pyrifera_M_contig88285.20506.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1602bp|location=Sequence derived from alignment at M-pyrifera_M_contig88285:2..820- (Macrocystis pyrifera P11B4 male)
ATGGCTCATTCCGATCTGACCCAGAGTATCACCGCCATTGATCGTGCCGC
AAAACTCACGACACAGTTGCTGCGATTCAGCCGCGTTGAGGAAGTGGAAA
AAATCACCTGCGATCCTCAGAATGTGATTGACGATTTGCGCGTGCTGCTT
CGTCCCTTGCTCCCCGAAAACATCTCGCTCGAGTATGAACTCTCTCCCCA
GTTACCTCAAATTGTGGCGAATCCACTTGTCCTGGGGCAGGCACTGCTCA
ACCTCTGCATGAACTCGCGCGACGCCATGCCGTCCGGAGGCACCATCACT
ATCGGCGATCGGTTGATCAGCACATCAGAAGACGCCAGGATCGGCTTCTA
TGTCAAAGACACCGGTCCAGGCATCCCGGAGAATATCCAGGACCGGATTT
TTGATCCCTTCTTCACCACTAAGGAAGTCGGGCAGGGGACCGGTCTGGGG
CTGGCGATGGTTTATTCCACCGCTGAAGAACATGGGGGCAGTGTCAACTT
CGAATCCCGACCGGGTGAAGGGACCCGCTTTGAAATCATGATCCCTGTCG
TCGATGAAAACGATACCCCCACTTCACAACATGTCGTCGATCGCTTTGAT
ATCAAAGCCACCCAGAATCGCTCAAAAACGGTGAAATCGATCCTGGTCGC
AGAAGACGATTCGATCGTCATGCGGGTTACCGTCCGCATGCTGGAGAACC
TGGGATATCATGTGCTTTCCGCAAATAATGGCAGGGCAGCCGTGGAAGTC
TACCGCAGGGAACGGGAAGACATTAAATGTCTTGTTTTCGACATCTCGAT
GATGGCTCATTCCGATCTGACCCAGAGTATCACCGCCATTGATCGTGCCG
CAAAACTCACGACACAGTTGCTGCGATTCAGCCGCGTTGAGGAAGTGGAA
AAAATCACCTGCGATCCTCAGAATGTGATTGACGATTTGCGCGTGCTGCT
TCGTCCCTTGCTCCCCGAAAACATCTCGCTCGAGTATGAACTCTCTCCCC
AGTTACCTCAAATTGTGGCGAATCCACTTGTCCTGGGGCAGGCACTGCTC
AACCTCTGCATGAACTCGCGCGACGCCATGCCGTCCGGAGGCACCATCAC
TATCGGCGATCGGTTGATCAGCACATCAGAAGACGCCAGGATCGGCTTCT
ATGTCAAAGACACCGGTCCAGGCATCCCGGAGAATATCCAGGACCGGATT
TTTGATCCCTTCTTCACCACTAAGGAAGTCGGGCAGGGGACCGGTCTGGG
GCTGGCGATGGTTTATTCCACCGCTGAAGAACATGGGGGCAGTGTCAACT
TCGAATCCCGACCGGGTGAAGGGACCCGCTTTGAAATCATGATCCCTGTC
GTCGATGAAAACGATACCCCCACTTCACAACATGTCGTCGATCGCTTTGA
TATCAAAGCCACCCAGAATCGCTCAAAAACGGTGAAATCGATCCTGGTCG
CAGAAGACGATTCGATCGTCATGCGGGTTACCGTCCGCATGCTGGAGAAC
CTGGGATATCATGTGCTTTCCGCAAATAATGGCAGGGCAGCCGTGGAAGT
CTACCGCAGGGAACGGGAAGACATTAAATGTCTTGTTTTCGACATCTCGA
TG
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