mRNA_M-pyrifera_M_contig88276.20503.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88276.20503.1
Unique NamemRNA_M-pyrifera_M_contig88276.20503.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Match: A0A6I6AA38_9PLAN (Uncharacterized protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AA38_9PLAN)

HSP 1 Score: 533 bits (1373), Expect = 1.700e-188
Identity = 264/269 (98.14%), Postives = 266/269 (98.88%), Query Frame = 1
Query:    1 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEPVTRKANKRQTTSVR 807
            LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEPVT+KA+K Q T VR
Sbjct:  184 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEPVTQKAHKGQKTRVR 452          
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Match: A0A2E7K4M5_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K4M5_9PLAN)

HSP 1 Score: 541 bits (1394), Expect = 2.560e-185
Identity = 267/269 (99.26%), Postives = 269/269 (100.00%), Query Frame = 1
Query:    1 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEPVTRKANKRQTTSVR 807
            LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQ+AYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGE+FRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEPVTRKANKRQTTSVR
Sbjct:  640 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQIAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGENFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEPVTRKANKRQTTSVR 908          
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Match: A0A518I697_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I697_9PLAN)

HSP 1 Score: 456 bits (1174), Expect = 1.920e-152
Identity = 218/269 (81.04%), Postives = 245/269 (91.08%), Query Frame = 1
Query:    1 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEPVTRKANKRQTTSVR 807
            LGE+ YATDVWG+RI LERD  TRRHKL V  +P+I+RKCN+Q+AYWRLAAQFEKGKSKSEYGGHADA++GKNTFSQSV+GKAV NVPKGWEVEP+EW FN GTGE++RLETFMTLP+NASLGKKDVSIDF+IFAERKYSIRV+RPYHVGLGDIV+ V D+K+EGNVLE+EQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYY+PNAD LKGKELWIRAEQVNGRRILNYRW VGE+W+ Q P  ++  K +   +R
Sbjct:  625 LGEDVYATDVWGRRIDLERDPETRRHKLSVGPAPVIVRKCNKQIAYWRLAAQFEKGKSKSEYGGHADALIGKNTFSQSVRGKAVFNVPKGWEVEPQEWEFNTGTGEEYRLETFMTLPSNASLGKKDVSIDFEIFAERKYSIRVNRPYHVGLGDIVVNVIDKKIEGNVLEVEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYIPNADSLKGKELWIRAEQVNGRRILNYRWVVGESWQNQTPTPQQEIKVEKPIIR 893          
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Match: A0A3D3R214_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A3D3R214_9PLAN)

HSP 1 Score: 440 bits (1132), Expect = 6.090e-151
Identity = 208/262 (79.39%), Postives = 237/262 (90.46%), Query Frame = 1
Query:    1 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEPVTRKANK 786
            LGE+  ATD+WG+RI LERD  T RH L V  SP+ILRKCNQQ+A WRLAAQFE GKS+SEYGGH DAVLG+NTF QSV+GKAVLNVP+GWEVEP+EW F+ G GE +RLETFMTLP+NASLG+KDVSIDFDIFAERKYSIRVHRPYHVGLGDI+++V D+KL+GNVLEIEQ+IVNNTSPLETLQFRCSLFIP+MKRMQRFITELK+GQDRKLYY+PNAD LKGKELW+RAEQVNGRRILNYRWTVGENW+  + ++RK  +
Sbjct:  247 LGEDVVATDIWGRRISLERDANTHRHTLRVGSSPMILRKCNQQIANWRLAAQFEIGKSRSEYGGHPDAVLGRNTFLQSVRGKAVLNVPRGWEVEPQEWVFDTGAGEKYRLETFMTLPSNASLGRKDVSIDFDIFAERKYSIRVHRPYHVGLGDIMVQVNDKKLKGNVLEIEQVIVNNTSPLETLQFRCSLFIPNMKRMQRFITELKHGQDRKLYYIPNADALKGKELWLRAEQVNGRRILNYRWTVGENWDKPDTISRKQRR 508          
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Match: A6C9R8_9PLAN (Uncharacterized protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A6C9R8_9PLAN)

HSP 1 Score: 442 bits (1136), Expect = 9.640e-147
Identity = 212/270 (78.52%), Postives = 241/270 (89.26%), Query Frame = 1
Query:    1 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEPVTRKANKRQTT-SVR 807
            LGE+  ATD+WG+RI LERD  T RH L V  SP+ILRKCNQQ+A WRLAAQFE GKS+SEYGGH DAVLGKNTF QSV+GKAVLNVP+GWEVEP+EW F+ G GE +RLETFMTLP+NASLG+KDVSIDFDIFAERKYSIRVHRPYHVGLGDI+++V D+KL+GNVLEIEQ+IVNNTSPLETLQFRCSLFIP+MKRMQRFITELK+GQDRKLYY+PNAD LKGKELW+RAEQVNGRRILNYRWTVGENW+  + ++RK  + +   SVR
Sbjct:  625 LGEDVVATDIWGRRISLERDANTHRHTLRVGSSPMILRKCNQQIANWRLAAQFEIGKSRSEYGGHPDAVLGKNTFLQSVRGKAVLNVPRGWEVEPQEWVFDTGAGEKYRLETFMTLPSNASLGRKDVSIDFDIFAERKYSIRVHRPYHVGLGDIMVQVNDKKLKGNVLEIEQVIVNNTSPLETLQFRCSLFIPNMKRMQRFITELKHGQDRKLYYIPNADALKGKELWLRAEQVNGRRILNYRWTVGENWDKPDTISRKQRRTENAISVR 894          
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Match: A0A517W3F1_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W3F1_9PLAN)

HSP 1 Score: 428 bits (1100), Expect = 2.270e-141
Identity = 202/269 (75.09%), Postives = 235/269 (87.36%), Query Frame = 1
Query:    1 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEPVTRKANKRQTTSVR 807
            LGE+ YATDVWG+RI L+RD  TRR  L V  SP+I+RKCN++VAYWRLAAQFEKGKSKSEYGGH +AV+GKNTFSQS++ KA LNVPKGWE EP+EW FNAG GE +RLETFMTLPTNASLG+KDVSID++I AER YSIRVHRPY VGLGDIVIKV D+K+EGNVLE+EQII+NNTSPLETLQFRCSLF+P MKRM+R +TELKNGQDRKLY++PNA+ LKGKELWIRAEQ NGRRILNYRW VGE+WE  + ++R+  K +   +R
Sbjct:  625 LGEHTYATDVWGRRIKLDRDPKTRRQVLSVGSSPMIIRKCNKEVAYWRLAAQFEKGKSKSEYGGHNEAVIGKNTFSQSIRAKAFLNVPKGWETEPQEWVFNAGAGEGYRLETFMTLPTNASLGRKDVSIDYEISAERLYSIRVHRPYRVGLGDIVIKVVDKKIEGNVLEVEQIIINNTSPLETLQFRCSLFVPRMKRMRRIVTELKNGQDRKLYHIPNANALKGKELWIRAEQTNGRRILNYRWIVGEDWENPDTISRRQRKARVQVIR 893          
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Match: A0A3B1DYR6_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DYR6_9ZZZZ)

HSP 1 Score: 278 bits (710), Expect = 7.680e-84
Identity = 129/249 (51.81%), Postives = 179/249 (71.89%), Query Frame = 1
Query:    1 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGEN 747
            LGE    TDVWG++  L  D  T R  + V  +P+++R C++ VA WR+A QF+KG+ +S+ G   +A++GKN F+Q + G A LN+PK W V P  W F     +  +L   +TLP NASLGK+ VSIDF+I A+R+Y  RV+R   +GLGD+++KVT++ L    LE+EQII NNTSP+ETL FRCSLF+P  +R ++F+T+LK G+D+K Y +PNA  LKGKELW+RAE+++GRR+LNYRW VGEN
Sbjct:  633 LGEQVNVTDVWGRQRALPLDSKTGRQTVQVGPTPLVIRGCSEAVARWRIAMQFQKGRLRSQTGQQQEAIIGKNFFTQGISGTARLNIPKEWGVGPSHWEFQLAANQKLKLPMDITLPPNASLGKQPVSIDFNIQADRRYRFRVYRHIEIGLGDVLVKVTEKILPDGSLEVEQIITNNTSPVETLNFRCSLFVPGHQRKKQFVTKLKKGKDKKSYRIPNAQMLKGKELWLRAEEMDGRRVLNYRWRVGEN 881          
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Match: A0A7C4LKE8_9PLAN (Uncharacterized protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4LKE8_9PLAN)

HSP 1 Score: 259 bits (662), Expect = 1.170e-76
Identity = 126/255 (49.41%), Postives = 164/255 (64.31%), Query Frame = 1
Query:    1 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWEAQEP 765
            LGE   A D+WG+   L     T  H L V  SP ++   ++ +A W +AA FE+GK +SEYGGH DA++G+NTF Q V G   L +P GWE + REW+ +AG GE FR   ++T P  A+LG+  + +DF I A+R Y  RV   Y +GLGD+ ++V DR+L    LEIEQI+ N T P E L FRCSLFIP  +R +  IT+L  G DRK YYLPNADR +G+ L +R EQ  GRR+LNYRW VG +W A  P
Sbjct:  657 LGEEPRAIDLWGRARPLAAHPATGEHSLAVNSSPSLIAGVSEPIARWSIAAGFEQGKMRSEYGGHLDAIVGRNTFPQGVSGTVSLILPDGWETDAREWSLHAGAGESFRFPVYLTAPATATLGQHRLMLDFRIVADRPYRFRVPCDYTIGLGDVTLEVRDRRLPDGRLEIEQIVTNRTEPEEVLDFRCSLFIPHARRHKMQITKLGRGLDRKYYYLPNADRYRGQTLSLRLEQDGGRRVLNYRWVVGADWPAAPP 911          
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Match: UPI001421DF92 (hypothetical protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001421DF92)

HSP 1 Score: 238 bits (607), Expect = 5.670e-69
Identity = 114/244 (46.72%), Postives = 156/244 (63.93%), Query Frame = 1
Query:   19 ATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENW 750
            AT VWG+   +  D  + R +L +   P+I+R C+  +  WRLA QF KG+  SE G H DA++G+N F Q V+G   ++ P  WE+EP    F  G GE FR    +TLP   +LG +  ++DF++ A+R Y  RV+RPY +GLGDI I+VTDRKL    LE+E  ++NN  P   L F CSLF+P MKR +  +T+L  G   KL+ +PNA+R  GKE WIRAEQ++GRR+LNYRW +G  W
Sbjct:  654 ATTVWGEPKDIPSDPQSNRQQLAIGPMPLIVRGCSAPITKWRLAIQFAKGRLPSETGIHEDAIIGRNPFPQGVRGTVTVSGPSEWEIEPGTIPFQLGAGESFRKSMLVTLPLLVTLGPQWTALDFELEADRLYQFRVYRPYTIGLGDIEIRVTDRKLANGTLEVELELINNIKPEAELDFECSLFVPGMKRERVLMTKLGQGTGTKLFTIPNANRYFGKEFWIRAEQLDGRRVLNYRWRIGREW 897          
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Match: A0A517R3U4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517R3U4_9BACT)

HSP 1 Score: 236 bits (602), Expect = 3.180e-68
Identity = 116/251 (46.22%), Postives = 164/251 (65.34%), Query Frame = 1
Query:    1 LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLAAQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTFNAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVGLGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQRFITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENWE 753
            LGE A + D++G +  + +D T R+  L +   P+I+   ++ VA WR + +FE G+ +S++G   DA++G+N+ +Q V G   L++P+ WE +   W F+ G GE FRL   ++LP NASLG   V ++F +  +R Y   V R   VG GD+ + VTDRKL   +LEIEQ I N TSP+E L FRCSLF+P  +R  R +T+L +G D K Y LP+A+  +GKELWIRAEQ  GRR+LNYRW VGE+WE
Sbjct:  656 LGETAKSIDIFGLQRTIPKDSTGRQ-LLDIGPEPLIITGGSEAVARWRTSVRFENGRLQSQHGEQRDAIVGRNSLNQGVSGTVTLHLPREWESDRDRWEFSLGPGEAFRLPVGLSLPPNASLGTTPVELEFSVVGDRPYRFTVRRTLEVGFGDLHLLVTDRKLNDGLLEIEQKITNRTSPVEVLDFRCSLFVPGSQRQIRTVTKLGSGTDTKFYKLPDAEAHRGKELWIRAEQEGGRRVLNYRWLVGEDWE 905          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88276.20503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6AA38_9PLAN1.700e-18898.14Uncharacterized protein n=1 Tax=Gimesia benthica T... [more]
A0A2E7K4M5_9PLAN2.560e-18599.26Uncharacterized protein n=8 Tax=Gimesia TaxID=1649... [more]
A0A518I697_9PLAN1.920e-15281.04Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A0A3D3R214_9PLAN6.090e-15179.39Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
A6C9R8_9PLAN9.640e-14778.52Uncharacterized protein n=9 Tax=Planctomycetaceae ... [more]
A0A517W3F1_9PLAN2.270e-14175.09Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
A0A3B1DYR6_9ZZZZ7.680e-8451.81Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
A0A7C4LKE8_9PLAN1.170e-7649.41Uncharacterized protein n=1 Tax=Schlesneria paludi... [more]
UPI001421DF925.670e-6946.72hypothetical protein n=1 Tax=Rubinisphaera sp. JC6... [more]
A0A517R3U4_9BACT3.180e-6846.22Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88276contigM-pyrifera_M_contig88276:3..812 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score447.6
Seed ortholog evalue4.2e-123
Seed eggNOG ortholog344747.PM8797T_06997
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cell adhesion involved in biofilm formation
EggNOG OGs2IZ1T@203682,COG1470@1,COG1470@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size810
Cds size810
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816792.365931-CDS-M-pyrifera_M_contig88276:2..8121622816792.365931-CDS-M-pyrifera_M_contig88276:2..812Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88276 3..812 +
1692278181.1801078-CDS-M-pyrifera_M_contig88276:2..8121692278181.1801078-CDS-M-pyrifera_M_contig88276:2..812Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88276 3..812 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88276.20503.1prot_M-pyrifera_M_contig88276.20503.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88276 3..812 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88276.20503.1

>prot_M-pyrifera_M_contig88276.20503.1 ID=prot_M-pyrifera_M_contig88276.20503.1|Name=mRNA_M-pyrifera_M_contig88276.20503.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp
LGENAYATDVWGKRILLERDETTRRHKLLVTRSPIILRKCNQQVAYWRLA
AQFEKGKSKSEYGGHADAVLGKNTFSQSVQGKAVLNVPKGWEVEPREWTF
NAGTGEDFRLETFMTLPTNASLGKKDVSIDFDIFAERKYSIRVHRPYHVG
LGDIVIKVTDRKLEGNVLEIEQIIVNNTSPLETLQFRCSLFIPSMKRMQR
FITELKNGQDRKLYYLPNADRLKGKELWIRAEQVNGRRILNYRWTVGENW
EAQEPVTRKANKRQTTSVR*
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mRNA from alignment at M-pyrifera_M_contig88276:3..812+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88276.20503.1 ID=mRNA_M-pyrifera_M_contig88276.20503.1|Name=mRNA_M-pyrifera_M_contig88276.20503.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig88276:3..812+ (Macrocystis pyrifera P11B4 male)
CTGGGGGAGAACGCCTATGCCACCGATGTCTGGGGGAAACGGATCTTGCT GGAGCGGGATGAAACGACCCGTCGCCATAAGCTGCTGGTGACCCGTTCTC CGATTATCCTGCGTAAATGCAATCAGCAGGTCGCATACTGGAGACTGGCT GCTCAGTTTGAGAAAGGGAAGTCTAAGAGTGAATATGGCGGGCATGCAGA TGCGGTTCTGGGAAAGAATACGTTTAGCCAGAGTGTGCAGGGCAAGGCTG TGTTGAATGTTCCCAAAGGCTGGGAAGTCGAACCGCGAGAGTGGACGTTT AACGCCGGCACCGGAGAAGATTTCCGCCTGGAGACCTTTATGACACTCCC CACGAATGCGAGCCTGGGGAAGAAGGATGTGTCGATTGACTTTGATATTT TTGCCGAGCGAAAATATTCAATTCGCGTACATCGCCCTTATCATGTCGGG CTGGGAGATATCGTGATCAAGGTCACGGATCGAAAACTCGAGGGGAATGT TCTGGAGATCGAACAGATCATCGTGAATAATACCTCACCACTGGAAACAC TGCAGTTCCGTTGCAGTCTGTTCATTCCCAGCATGAAGCGGATGCAGCGT TTTATTACCGAGCTCAAAAACGGACAGGACCGGAAGCTGTATTACCTGCC GAATGCGGATCGGCTCAAAGGGAAAGAACTCTGGATTCGGGCAGAGCAGG TGAATGGCCGCCGAATTCTGAACTACCGCTGGACGGTGGGAGAGAACTGG GAAGCACAGGAACCGGTGACCCGGAAAGCGAATAAACGTCAGACCACATC GGTACGTTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88276:3..812+

>mRNA_M-pyrifera_M_contig88276.20503.1 ID=mRNA_M-pyrifera_M_contig88276.20503.1|Name=mRNA_M-pyrifera_M_contig88276.20503.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig88276:3..812+ (Macrocystis pyrifera P11B4 male)
CTGGGGGAGAACGCCTATGCCACCGATGTCTGGGGGAAACGGATCTTGCT
GGAGCGGGATGAAACGACCCGTCGCCATAAGCTGCTGGTGACCCGTTCTC
CGATTATCCTGCGTAAATGCAATCAGCAGGTCGCATACTGGAGACTGGCT
GCTCAGTTTGAGAAAGGGAAGTCTAAGAGTGAATATGGCGGGCATGCAGA
TGCGGTTCTGGGAAAGAATACGTTTAGCCAGAGTGTGCAGGGCAAGGCTG
TGTTGAATGTTCCCAAAGGCTGGGAAGTCGAACCGCGAGAGTGGACGTTT
AACGCCGGCACCGGAGAAGATTTCCGCCTGGAGACCTTTATGACACTCCC
CACGAATGCGAGCCTGGGGAAGAAGGATGTGTCGATTGACTTTGATATTT
TTGCCGAGCGAAAATATTCAATTCGCGTACATCGCCCTTATCATGTCGGG
CTGGGAGATATCGTGATCAAGGTCACGGATCGAAAACTCGAGGGGAATGT
TCTGGAGATCGAACAGATCATCGTGAATAATACCTCACCACTGGAAACAC
TGCAGTTCCGTTGCAGTCTGTTCATTCCCAGCATGAAGCGGATGCAGCGT
TTTATTACCGAGCTCAAAAACGGACAGGACCGGAAGCTGTATTACCTGCC
GAATGCGGATCGGCTCAAAGGGAAAGAACTCTGGATTCGGGCAGAGCAGG
TGAATGGCCGCCGAATTCTGAACTACCGCTGGACGGTGGGAGAGAACTGG
GAAGCACAGGAACCGGTGACCCGGAAAGCGAATAAACGTCAGACCACATC
GGTACGTTAACTGGGGGAGAACGCCTATGCCACCGATGTCTGGGGGAAAC
GGATCTTGCTGGAGCGGGATGAAACGACCCGTCGCCATAAGCTGCTGGTG
ACCCGTTCTCCGATTATCCTGCGTAAATGCAATCAGCAGGTCGCATACTG
GAGACTGGCTGCTCAGTTTGAGAAAGGGAAGTCTAAGAGTGAATATGGCG
GGCATGCAGATGCGGTTCTGGGAAAGAATACGTTTAGCCAGAGTGTGCAG
GGCAAGGCTGTGTTGAATGTTCCCAAAGGCTGGGAAGTCGAACCGCGAGA
GTGGACGTTTAACGCCGGCACCGGAGAAGATTTCCGCCTGGAGACCTTTA
TGACACTCCCCACGAATGCGAGCCTGGGGAAGAAGGATGTGTCGATTGAC
TTTGATATTTTTGCCGAGCGAAAATATTCAATTCGCGTACATCGCCCTTA
TCATGTCGGGCTGGGAGATATCGTGATCAAGGTCACGGATCGAAAACTCG
AGGGGAATGTTCTGGAGATCGAACAGATCATCGTGAATAATACCTCACCA
CTGGAAACACTGCAGTTCCGTTGCAGTCTGTTCATTCCCAGCATGAAGCG
GATGCAGCGTTTTATTACCGAGCTCAAAAACGGACAGGACCGGAAGCTGT
ATTACCTGCCGAATGCGGATCGGCTCAAAGGGAAAGAACTCTGGATTCGG
GCAGAGCAGGTGAATGGCCGCCGAATTCTGAACTACCGCTGGACGGTGGG
AGAGAACTGGGAAGCACAGGAACCGGTGACCCGGAAAGCGAATAAACGTC
AGACCACATCGGTACGTTAA
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