mRNA_M-pyrifera_M_contig88274.20502.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Match: A0A5A8E2Y0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E2Y0_CAFRO) HSP 1 Score: 128 bits (321), Expect = 7.350e-34 Identity = 71/158 (44.94%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 4 SDLMLAEKALESVPTDV---HASPESVRTLNLSGNALRSLAGLSAYSNLETLVLXXXXXXXXXXXXXXXXXXXLWFNTNAVEDMVEFLGEVVAAFPRLSFLSMMNNPASPSLVCMSEEDIKAQERHRLYVIYRVPTLEFLDAGPVSAEERASARERGR 468 + ++LA + L ++P D HA V +L+L+ NAL L+GL +S L+TL+L L FN NAVEDM FL + A P ++FLS+M NPASP ++ +SEED+ A RHRLYV+YRVP+L FLDA PV+A ERA A +G+ Sbjct: 24 ASIVLAGQGLSAIPVDALRDHAP--HVTSLDLTDNALMDLSGLELFSALDTLILDKNGLSSLEGAPKLPSVKTLSFNNNAVEDMTSFLDSALEAVPAVTFLSVMRNPASPPMIQLSEEDVAAATRHRLYVVYRVPSLTFLDAAPVTAAERAEAASKGK 179
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Match: A0A813A777_9DINO (Lrmda protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A777_9DINO) HSP 1 Score: 125 bits (315), Expect = 9.250e-33 Identity = 67/154 (43.51%), Postives = 89/154 (57.79%), Query Frame = 1 Query: 7 DLMLAEKALESVPTDVHASPESVRTLNLSGNALRSLAGLSAYSNLETLVLXXXXXXXXXXXXXXXXXXXLWFNTNAVEDMVEFLGEVVAAFPRLSFLSMMNNPASPSLVCMSEEDIKAQERHRLYVIYRVPTLEFLDAGPVSAEERASARERGR 468 D + L ++P V A+ E+V+TLNLS NAL S G A + L TL+L LWFN N V D+ F+ V + FP L+ LS+M NPASP +V +S+EDI +R+RLY+IYR+P L FLDA PVS ER A +G+ Sbjct: 7 DAAFVDAGLSALPPHVAAAGEAVKTLNLSENALTSWEGFEALTGLTTLILDKNGLEGLDGAPSLPALKELWFNNNQVHDLAAFMDSVTSNFPGLTTLSLMRNPASPPMVALSQEDIARAKRYRLYIIYRMPALAFLDATPVSTAEREEAAAKGK 160
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Match: A0A812HNT1_9DINO (LRMDA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812HNT1_9DINO) HSP 1 Score: 115 bits (287), Expect = 8.970e-27 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 106 RSLAGLSAYSNLETLVLXXXXXXXXXXXXXXXXXXXLWFNTNAVEDMVEFLGEVVAAFPRLSFLSMMNNPASPSLVCMSEEDIKAQERHRLYVIYRVPTLEFLDAGPVSAEERASARERGR 468 R L+GL +S L+TL+L L FN NAVEDM FL + A P ++FLS+M NPASP ++ +SEED+ A RHRLYV+YRVP+L FLDA PV+A ERA A +G+ Sbjct: 860 RDLSGLELFSALDTLILDKNGLSSLEGAPKLPSVKTLSFNNNAVEDMTSFLDSALEAVPAVTFLSVMRNPASPPMIQLSEEDVAAATRHRLYVVYRVPSLTFLDAAPVTAAERAEAASKGK 980
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Match: UPI0016014B1F (leucine-rich melanocyte differentiation-associated protein-like isoform X2 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016014B1F) HSP 1 Score: 90.1 bits (222), Expect = 6.530e-19 Identity = 48/131 (36.64%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 73 VRTLNLSGNALRSLAGLSAYSNLETLVLXXXXXXXXXXXXXXXXXXXLWFNTNAVEDMVEFLGEVVAAFPRLSFLSMMNNPASPSLVCMSEEDIKAQERHRLYVIYRVPTLEFLDAGPVSAEERASARERG 465 V+ L+LS N +RSL GLS++ LE L++ L N N + D+ +FL +V + P L++LS++ N A P+ + ++D + +R+R YV+Y++P+L FLDA PVS E A A+ RG Sbjct: 80 VKRLDLSFNRIRSLDGLSSFPELEELIVDNNELDDGVVFPRLPTLHTLMINKNRITDLEDFLNKVDTSCPNLTYLSLLGNVACPNELSAEDKDEEDYQRYRYYVLYKMPSLRFLDARPVSRTELAEAKTRG 210
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Match: A0A7S1CND0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CND0_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 9.110e-19 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 214 LWFNTNAVEDMVEFLGEVVAAFPRLSFLSMMNNPASPSLVCMSEEDIKAQERHRLYVIYRVPTLEFLDAGPVSAEERASARERGR 468 LW N N V D+ ++ P LSFL +M NPASP L S+ D K + RLY IY +PTL+FLD+ PVS EERA A++RG+ Sbjct: 18 LWLNDNKVSDLPTLYAQIRERMPSLSFLCLMRNPASPPLAPFSDADAKKIRQFRLYTIYSLPTLQFLDSSPVSPEERAEAKKRGK 102
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Match: UPI001601DF30 (leucine-rich melanocyte differentiation-associated protein-like isoform X1 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001601DF30) HSP 1 Score: 90.1 bits (222), Expect = 3.320e-18 Identity = 48/131 (36.64%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 73 VRTLNLSGNALRSLAGLSAYSNLETLVLXXXXXXXXXXXXXXXXXXXLWFNTNAVEDMVEFLGEVVAAFPRLSFLSMMNNPASPSLVCMSEEDIKAQERHRLYVIYRVPTLEFLDAGPVSAEERASARERG 465 V+ L+LS N +RSL GLS++ LE L++ L N N + D+ +FL +V + P L++LS++ N A P+ + ++D + +R+R YV+Y++P+L FLDA PVS E A A+ RG Sbjct: 246 VKRLDLSFNRIRSLDGLSSFPELEELIVDNNELDDGVVFPRLPTLHTLMINKNRITDLEDFLNKVDTSCPNLTYLSLLGNVACPNELSAEDKDEEDYQRYRYYVLYKMPSLRFLDARPVSRTELAEAKTRG 376
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Match: A0A1S3JY23_LINUN (leucine-rich melanocyte differentiation-associated protein n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JY23_LINUN) HSP 1 Score: 84.3 bits (207), Expect = 6.730e-17 Identity = 46/130 (35.38%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 76 RTLNLSGNALRSLAGLSAYSNLETLVLXXXXXXXXXXXXXXXXXXXLWFNTNAVEDMVEFLGEVVAAFPRLSFLSMMNNPASPSLVCMSEEDIKAQERHRLYVIYRVPTLEFLDAGPVSAEERASARERG 465 RTL+LS N + +L GL + NLE L+L + N N + D+ L ++ P L+FLS++ N A P+ + ++D R+R+YV+YRVP L+FLD+ PV ERA A+ +G Sbjct: 56 RTLDLSFNRISTLDGLENFPNLEELILDNNEVDDSINIPQMTKLHTISLNKNRISDLESLLEQINKNCPSLTFLSLLGNVACPNQLSSLDKDDDDYRRYRMYVLYRVPRLKFLDSSPVKEAERAEAKRQG 185
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Match: A0A5J4W6E8_9EUKA (Putative leucine-rich melanocyte differentiation-associated protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4W6E8_9EUKA) HSP 1 Score: 83.6 bits (205), Expect = 1.230e-16 Identity = 43/133 (32.33%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 67 ESVRTLNLSGNALRSLAGLSAYSNLETLVLXXXXXXXXXXXXXXXXXXXLWFNTNAVEDMVEFLGEVVAAFPRLSFLSMMNNPASPSLVCMSEEDIKAQERHRLYVIYRVPTLEFLDAGPVSAEERASARERG 465 + + +L++S N +RSL + + L++LV LW N N + ++ L ++ P+LS+LS+M NPA P + +E++ A R+RLYV++R+P L FLD+ PV+ +E+ A+ RG Sbjct: 56 KDIHSLDISHNNIRSLENVQLFPKLKSLVADNNQIDDSVDFPPLPSLETLWMNNNRITEIKRLLDQLCQRAPQLSYLSLMKNPACPHRISGNEDEDYA--RYRLYVLWRIPKLRFLDSSPVTTKEKQEAQRRG 186
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Match: UPI0018D0D22F (leucine-rich melanocyte differentiation-associated protein isoform X2 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0D22F) HSP 1 Score: 81.6 bits (200), Expect = 5.390e-16 Identity = 44/131 (33.59%), Postives = 74/131 (56.49%), Query Frame = 1 Query: 73 VRTLNLSGNALRSLAGLSAYSNLETLVLXXXXXXXXXXXXXXXXXXXLWFNTNAVEDMVEFLGEVVAAFPRLSFLSMMNNPASPSLVCMSEEDIKAQERHRLYVIYRVPTLEFLDAGPVSAEERASARERG 465 V L+LS N++ +L L + LE L+L L N N +ED+ L ++ A+FP L++LS+++N A P + ++D +R+R +VIY+VPTL+FLD+ ++ +ER+ A +RG Sbjct: 41 VHYLDLSYNSIETLRDLDQFCGLEELILDNNKLGDGAAFPPLPRLRTLALNNNQIEDLEGLLDKIRASFPALTYLSLLSNKACPDQLSDLDKDESDYQRYRYFVIYKVPTLQFLDSRRITHQERSEALKRG 171
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Match: UPI0018D139F7 (leucine-rich melanocyte differentiation-associated protein isoform X1 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D139F7) HSP 1 Score: 81.6 bits (200), Expect = 1.720e-15 Identity = 44/131 (33.59%), Postives = 74/131 (56.49%), Query Frame = 1 Query: 73 VRTLNLSGNALRSLAGLSAYSNLETLVLXXXXXXXXXXXXXXXXXXXLWFNTNAVEDMVEFLGEVVAAFPRLSFLSMMNNPASPSLVCMSEEDIKAQERHRLYVIYRVPTLEFLDAGPVSAEERASARERG 465 V L+LS N++ +L L + LE L+L L N N +ED+ L ++ A+FP L++LS+++N A P + ++D +R+R +VIY+VPTL+FLD+ ++ +ER+ A +RG Sbjct: 128 VHYLDLSYNSIETLRDLDQFCGLEELILDNNKLGDGAAFPPLPRLRTLALNNNQIEDLEGLLDKIRASFPALTYLSLLSNKACPDQLSDLDKDESDYQRYRYFVIYKVPTLQFLDSRRITHQERSEALKRG 258 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88274.20502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88274.20502.1 >prot_M-pyrifera_M_contig88274.20502.1 ID=prot_M-pyrifera_M_contig88274.20502.1|Name=mRNA_M-pyrifera_M_contig88274.20502.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp MLAEKALESVPTDVHASPESVRTLNLSGNALRSLAGLSAYSNLETLVLDKback to top mRNA from alignment at M-pyrifera_M_contig88274:1..468- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88274.20502.1 ID=mRNA_M-pyrifera_M_contig88274.20502.1|Name=mRNA_M-pyrifera_M_contig88274.20502.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig88274:1..468- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88274:1..468- >mRNA_M-pyrifera_M_contig88274.20502.1 ID=mRNA_M-pyrifera_M_contig88274.20502.1|Name=mRNA_M-pyrifera_M_contig88274.20502.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig88274:1..468- (Macrocystis pyrifera P11B4 male)back to top |