mRNA_M-pyrifera_M_contig88267.20500.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88267.20500.1
Unique NamemRNA_M-pyrifera_M_contig88267.20500.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Match: A0A7C1WDQ8_9BACT (Efflux RND transporter permease subunit (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WDQ8_9BACT)

HSP 1 Score: 481 bits (1239), Expect = 5.350e-163
Identity = 232/273 (84.98%), Postives = 260/273 (95.24%), Query Frame = 1
Query:    1 IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPGLAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEGYTPMHLRDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKVFEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQGTPVYLENLGEVEFAPMIRQGAVTRD 819
            IDFSL+NRLLV+IGWLLIVALGLDSLRKLPIDAVPDVTN+QVQ+LTNSPGLAPQEVESFITFPVETAMSGLPR+E++RSVSKFGLSVVTVVFEEGTDIYWARQL+ ER++EARD+IP +YGEPGMGPIS+GLGEIYQFEV+GEGYTPM LRD+LDW+VGYQLRSVPGVVEVNSFGGELR+YQ T+DP+KL SYGI +  VFEALE NNRNVGGGYIVHA EQYL+RGEGL+E LEDLA VVV+KD++GTPVY++NLG VEFAP+IRQGAVTRD
Sbjct:    6 IDFSLNNRLLVLIGWLLIVALGLDSLRKLPIDAVPDVTNIQVQILTNSPGLAPQEVESFITFPVETAMSGLPRVEEIRSVSKFGLSVVTVVFEEGTDIYWARQLIAERMSEARDAIPPEYGEPGMGPISTGLGEIYQFEVRGEGYTPMQLRDILDWNVGYQLRSVPGVVEVNSFGGELRSYQVTIDPRKLRSYGIPLTTVFEALEENNRNVGGGYIVHASEQYLIRGEGLVEDLEDLATVVVAKDERGTPVYIDNLGTVEFAPIIRQGAVTRD 278          
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Match: A0A7V7SWZ7_9BACT (AcrB/AcrD/AcrF family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V7SWZ7_9BACT)

HSP 1 Score: 471 bits (1213), Expect = 1.310e-156
Identity = 226/273 (82.78%), Postives = 257/273 (94.14%), Query Frame = 1
Query:    1 IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPGLAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEGYTPMHLRDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKVFEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQGTPVYLENLGEVEFAPMIRQGAVTRD 819
            IDFSL+NRLLV+I W+L+  +G+DSL+KLPIDAVPDVTN+QVQVLTNSPGLAPQEVESFITFPVETAMSGLP++EQ+RSVSKFGLSVVTVVFEEGTDIYWARQLV ERL+EAR+SIP++YG+PGMGPIS+GLGEIYQFEVKG+GY+PM LRD+LDWSV YQLRSVPGVVEVNSFGGELRTYQ TLDP KL SYG+S+  VF+ALE NNRNVGGGYIVHADEQYL+RGEGL+E L+DLAKVVV+KD +GTPVYL++LG +EFAP IRQGAVTRD
Sbjct:    6 IDFSLNNRLLVLIAWVLVAVVGVDSLQKLPIDAVPDVTNIQVQVLTNSPGLAPQEVESFITFPVETAMSGLPKVEQIRSVSKFGLSVVTVVFEEGTDIYWARQLVSERLSEARESIPEEYGDPGMGPISTGLGEIYQFEVKGDGYSPMELRDILDWSVAYQLRSVPGVVEVNSFGGELRTYQVTLDPTKLSSYGLSLATVFDALESNNRNVGGGYIVHADEQYLIRGEGLVEDLDDLAKVVVTKDARGTPVYLDSLGSIEFAPTIRQGAVTRD 278          
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Match: A0A356KTH3_9BACT (CusA/CzcA family heavy metal efflux RND transporter (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356KTH3_9BACT)

HSP 1 Score: 440 bits (1132), Expect = 1.440e-152
Identity = 210/273 (76.92%), Postives = 244/273 (89.38%), Query Frame = 1
Query:    1 IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPGLAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEGYTPMHLRDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKVFEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQGTPVYLENLGEVEFAPMIRQGAVTRD 819
            +DFSLDNR LVI+ WLL+VA+G+ SLR+LPIDAVPDVTNVQVQ+LTNSPGLAP+EVE FITFPVET+MSGLPR+E++RSVSKFGLS VTVVFEEGTDIYWARQL+ ERL EAR+ IP+ YGEP MGPIS+GLGEIYQFEV+G+GYTPM LR +LDW+V YQLRSVPGVVEVN+FGGEL+TYQ TLDP KLVSYGI +  VF++++RNNRNVGGGYI HA EQYL+RGEGL+  L+ L+ VVV  D  GTPVY+ NLG+VEFAPMIRQG+VTRD
Sbjct:    6 VDFSLDNRFLVIVLWLLVVAIGIRSLRELPIDAVPDVTNVQVQILTNSPGLAPEEVERFITFPVETSMSGLPRVEEIRSVSKFGLSAVTVVFEEGTDIYWARQLISERLVEAREQIPEGYGEPSMGPISTGLGEIYQFEVRGKGYTPMQLRTILDWNVNYQLRSVPGVVEVNAFGGELKTYQVTLDPNKLVSYGIPLEHVFKSIQRNNRNVGGGYIEHAGEQYLIRGEGLVGDLDALSAVVVGHDSHGTPVYVRNLGKVEFAPMIRQGSVTRD 278          
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Match: A0A7Y3FJ71_9DELT (Efflux RND transporter permease subunit (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3FJ71_9DELT)

HSP 1 Score: 435 bits (1119), Expect = 2.160e-151
Identity = 213/285 (74.74%), Postives = 247/285 (86.67%), Query Frame = 1
Query:    1 IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPGLAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEG------------YTPMHLRDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKVFEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQGTPVYLENLGEVEFAPMIRQGAVTRD 819
            IDFSLD+R L+II WLL VALGL+SL  LPIDAVPDVTN+QVQVLT SPGLAP+EVE FITFPVETAMSGLPR+E++RSVSKFGLSVVTVVFEEG+DIYWARQLVGERLTEAR+ IP+ YGEPGMGPIS+GLGEIYQFEV+G+             Y+PM LR +LDW V YQLRSVPG+VEVNSFGGEL+TYQ TLDP +LVS+G+S+G VFEA+E NNRNVGGGYI    EQYLVRGEGL+E L DL ++V++ D++GTPVY++++GEVEFAPMIRQGAVTRD
Sbjct:    6 IDFSLDHRFLIIIFWLLAVALGLNSLLSLPIDAVPDVTNIQVQVLTTSPGLAPEEVERFITFPVETAMSGLPRVEEIRSVSKFGLSVVTVVFEEGSDIYWARQLVGERLTEAREQIPEGYGEPGMGPISTGLGEIYQFEVRGDPMCGSGEPDTDACYSPMELRTILDWFVNYQLRSVPGIVEVNSFGGELKTYQVTLDPDRLVSFGLSVGDVFEAVEMNNRNVGGGYIAKGGEQYLVRGEGLVENLADLGRIVLAHDERGTPVYIDDVGEVEFAPMIRQGAVTRD 290          
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Match: A0A2E1VSQ1_9BACT (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E1VSQ1_9BACT)

HSP 1 Score: 450 bits (1158), Expect = 1.720e-148
Identity = 217/273 (79.49%), Postives = 247/273 (90.48%), Query Frame = 1
Query:    1 IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPGLAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEGYTPMHLRDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKVFEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQGTPVYLENLGEVEFAPMIRQGAVTRD 819
            +DFSLDNR LVI+ WLLI ALG  S+RKLP+DAVPDVTN+QVQVLTNSPGLAPQE+ESF+TFPVE+AMSGLP +E++RSVSKFGLSVVTVVFEEGTDIYWARQLV ERL EAR++IP+ YG P MGPIS+GLGEIYQFE+KGEGYTPM LR LLDW V YQLR+VPGVVEVN+FGGEL+TYQ TLDPQ+L S GIS G VFE++  NNRNVGGGYI HA EQYL+RGEGL+E LEDLA++VV+KD++GTPVYLE+LG VEFAPMIRQGAVTRD
Sbjct:    6 VDFSLDNRFLVIVLWLLIGALGFQSMRKLPVDAVPDVTNIQVQVLTNSPGLAPQEMESFVTFPVESAMSGLPAVEEIRSVSKFGLSVVTVVFEEGTDIYWARQLVSERLVEAREAIPEGYGVPEMGPISTGLGEIYQFELKGEGYTPMELRTLLDWVVNYQLRTVPGVVEVNAFGGELKTYQITLDPQRLTSLGISAGHVFESIRGNNRNVGGGYIAHAGEQYLIRGEGLVENLEDLARIVVAKDERGTPVYLEDLGRVEFAPMIRQGAVTRD 278          
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Match: A0A660VNM5_9BACT (CusA/CzcA family heavy metal efflux RND transporter (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A660VNM5_9BACT)

HSP 1 Score: 411 bits (1056), Expect = 3.960e-143
Identity = 198/257 (77.04%), Postives = 233/257 (90.66%), Query Frame = 1
Query:    1 IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPGLAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEGYTPMHLRDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKVFEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQGTPVYLENLG 771
            ID SLDNRLLV++ WLL+V LG+ S+  LP+DAVPDVTNVQVQ+LTNSPGLAPQEVESFITFPVE+AMSGLP++E++RSVSKFGLSVVTVVF+EGTDIYWARQL+GERL  AR +IP  YGEP +GPIS+GLGEIYQFE++ E ++PM LR LLDW V YQLRSVPGVVEVN+FGGEL+TYQ TLDP KL S+GIS+G+VFEA+E NNRNVGGGYIVHADEQYLVRGEGL++ L+DLA+VVV++ ++GTPVYLENLG
Sbjct:    6 IDASLDNRLLVLVLWLLVVVLGVRSMGALPVDAVPDVTNVQVQILTNSPGLAPQEVESFITFPVESAMSGLPKVEEIRSVSKFGLSVVTVVFDEGTDIYWARQLIGERLMAARATIPQGYGEPELGPISTGLGEIYQFELQSETHSPMELRTLLDWVVNYQLRSVPGVVEVNAFGGELKTYQVTLDPAKLTSHGISVGQVFEAIEGNNRNVGGGYIVHADEQYLVRGEGLVQGLDDLARVVVARGERGTPVYLENLG 262          
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Match: A0A7Y3G1S0_9ACTN (Efflux RND transporter permease subunit (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3G1S0_9ACTN)

HSP 1 Score: 426 bits (1096), Expect = 4.120e-143
Identity = 208/285 (72.98%), Postives = 244/285 (85.61%), Query Frame = 1
Query:    1 IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPGLAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEG------------YTPMHLRDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKVFEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQGTPVYLENLGEVEFAPMIRQGAVTRD 819
            IDFSLDNR LVI+ WL  VA+G+ SL  LPIDAVPDVTN+QVQVLT SPGLAP+EVE FITFPVET+MSGLPR+E++RSVSKFGLSVVTVVFEEG+DIYWARQLVGERLTEARD IP+ YGEP MGPIS+GLGEIYQFEVKG+             YTPM LR +LDW V YQLRSVPG+VEVNSFGGEL+TYQ +LDP +L S+G+S+G VFEA+E+NNRNVGGGYI    EQYLVRGEGL+E L DL ++V++ D++GTPV+++++G+VEFAPMIRQGAVTRD
Sbjct:    6 IDFSLDNRFLVIVFWLFAVAVGMWSLLDLPIDAVPDVTNIQVQVLTTSPGLAPEEVERFITFPVETSMSGLPRVEEIRSVSKFGLSVVTVVFEEGSDIYWARQLVGERLTEARDQIPEGYGEPAMGPISTGLGEIYQFEVKGDPMCSVGAPDTDTCYTPMELRTILDWFVNYQLRSVPGIVEVNSFGGELKTYQISLDPDRLTSFGLSVGDVFEAVEQNNRNVGGGYIARGGEQYLVRGEGLVESLSDLGRIVLAHDERGTPVHVDDVGKVEFAPMIRQGAVTRD 290          
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Match: A0A7C8CWI1_9BACT (Efflux RND transporter permease subunit n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CWI1_9BACT)

HSP 1 Score: 436 bits (1121), Expect = 5.440e-143
Identity = 209/273 (76.56%), Postives = 245/273 (89.74%), Query Frame = 1
Query:    1 IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPGLAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEGYTPMHLRDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKVFEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQGTPVYLENLGEVEFAPMIRQGAVTRD 819
            IDFSLDNRL+V+IGW L+VALGL ++ ++PIDAVPDVTNVQVQ+LTNSPGLAP+E+ESF+TFPVE AMSGLPRI QVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERL +AR+ IP  YGEP MGPISSGLGEIYQFEV+GEGY+ M LR++LDW+V YQLR+VPGVVEVNSFGG+LRTYQ TLDP KL + G+S+ +VF A+  NNRNVGGGYI HA EQYL+RG+G++E L+DLA +VV KD +GTPVYL++LGE+EF PM+RQGAVTRD
Sbjct:    6 IDFSLDNRLIVLIGWTLVVALGLRAMLQIPIDAVPDVTNVQVQILTNSPGLAPKELESFVTFPVEAAMSGLPRISQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLADAREQIPAGYGEPFMGPISSGLGEIYQFEVRGEGYSKMDLREILDWTVNYQLRAVPGVVEVNSFGGDLRTYQVTLDPLKLNARGVSLKRVFAAIGENNRNVGGGYIAHAGEQYLIRGQGMVENLDDLAHIVVKKDARGTPVYLKHLGEIEFQPMLRQGAVTRD 278          
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Match: A0A7C5KN35_9BACT (Efflux RND transporter permease subunit n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5KN35_9BACT)

HSP 1 Score: 436 bits (1120), Expect = 7.660e-143
Identity = 207/273 (75.82%), Postives = 245/273 (89.74%), Query Frame = 1
Query:    1 IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPGLAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEGYTPMHLRDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKVFEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQGTPVYLENLGEVEFAPMIRQGAVTRD 819
            IDFSL+NR L+++ W L+ ALG+ SL +LPIDAVPDVTNVQVQVLTNSPG+APQE+E FITFPVETAMSGLPR+E++RSVSKFGLSVVT+VFEEGTDIYWARQLV ERL +AR+ IP+ YGEP MGPIS+GLGEIYQFE+KGEGY+PM LR LLDW V +QLRSV GVVEVNSFGGEL+TYQ T+DP +L + GIS+ +VFEA+E+NNRNVGGGYI H+DEQYL+RGEGLIE LE L  +VV+ D++GTPV+++NLG+VEFAPMIRQGAVTRD
Sbjct:    6 IDFSLNNRFLILVLWTLVAALGIRSLGELPIDAVPDVTNVQVQVLTNSPGIAPQEMERFITFPVETAMSGLPRVEEIRSVSKFGLSVVTIVFEEGTDIYWARQLVSERLGQAREGIPEGYGEPEMGPISTGLGEIYQFELKGEGYSPMELRSLLDWVVNFQLRSVKGVVEVNSFGGELKTYQITIDPSRLTALGISLAQVFEAVEKNNRNVGGGYIAHSDEQYLIRGEGLIESLESLGNIVVTHDEEGTPVFIKNLGKVEFAPMIRQGAVTRD 278          
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Match: A0A7V5RC28_9DELT (Efflux RND transporter permease subunit n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V5RC28_9DELT)

HSP 1 Score: 435 bits (1119), Expect = 1.210e-142
Identity = 208/274 (75.91%), Postives = 243/274 (88.69%), Query Frame = 1
Query:    1 IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPGLAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYWARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEGYTPMHLRDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKVFEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQ-GTPVYLENLGEVEFAPMIRQGAVTRD 819
            +DFSL+NRL+VII WLL+ A G++SL +LPIDAVPDVTN+QVQVLTNSPGL P+EVE FITFPVETAMSGLP +E++RSVSKFGLSVVT+VFEEGTDIYWARQLVGERL EAR+ IP+ YGEP MGPIS+GLGEIYQFEV+GEGYTPM LR +LDW V YQLRSVPG+VEVNSFGGEL+TYQ TLDP +L +YGIS+ ++ +ALE NNRNVGGGYI H  EQYL+RGEGLIE LEDL  ++V+ D+  GTP+Y+++LG VEFAPMIRQGAVTRD
Sbjct:    5 VDFSLNNRLIVIIVWLLVAAAGVNSLTRLPIDAVPDVTNIQVQVLTNSPGLPPEEVERFITFPVETAMSGLPAVEEIRSVSKFGLSVVTIVFEEGTDIYWARQLVGERLVEAREEIPEGYGEPAMGPISTGLGEIYQFEVRGEGYTPMELRTILDWYVNYQLRSVPGIVEVNSFGGELKTYQVTLDPGRLTAYGISVKEILDALESNNRNVGGGYIAHHGEQYLIRGEGLIETLEDLGDIIVTTDEHTGTPIYIKDLGRVEFAPMIRQGAVTRD 278          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88267.20500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1WDQ8_9BACT5.350e-16384.98Efflux RND transporter permease subunit (Fragment)... [more]
A0A7V7SWZ7_9BACT1.310e-15682.78AcrB/AcrD/AcrF family protein n=1 Tax=Planctomycet... [more]
A0A356KTH3_9BACT1.440e-15276.92CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A7Y3FJ71_9DELT2.160e-15174.74Efflux RND transporter permease subunit (Fragment)... [more]
A0A2E1VSQ1_9BACT1.720e-14879.49CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A660VNM5_9BACT3.960e-14377.04CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A7Y3G1S0_9ACTN4.120e-14372.98Efflux RND transporter permease subunit (Fragment)... [more]
A0A7C8CWI1_9BACT5.440e-14376.56Efflux RND transporter permease subunit n=1 Tax=Pl... [more]
A0A7C5KN35_9BACT7.660e-14375.82Efflux RND transporter permease subunit n=1 Tax=Pl... [more]
A0A7V5RC28_9DELT1.210e-14275.91Efflux RND transporter permease subunit n=1 Tax=De... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88267contigM-pyrifera_M_contig88267:3..821 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score364.8
Seed ortholog evalue3.6e-98
Seed eggNOG ortholog1278073.MYSTI_01859
KEGG koko:K07787,ko:K15726
KEGG TC2.A.6.1.2,2.A.6.1.4
KEGG Pathwayko02020,map02020
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EggNOG OGs1NUIV@1224,2WIQY@28221,2YTUC@29,42M0A@68525,COG3696@1,COG3696@2
COG Functional cat.P
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons1
Model size819
Cds size819
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816792.2565346-CDS-M-pyrifera_M_contig88267:2..8211622816792.2565346-CDS-M-pyrifera_M_contig88267:2..821Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88267 3..821 -
1692278181.123265-CDS-M-pyrifera_M_contig88267:2..8211692278181.123265-CDS-M-pyrifera_M_contig88267:2..821Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88267 3..821 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88267.20500.1prot_M-pyrifera_M_contig88267.20500.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88267 3..821 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88267.20500.1

>prot_M-pyrifera_M_contig88267.20500.1 ID=prot_M-pyrifera_M_contig88267.20500.1|Name=mRNA_M-pyrifera_M_contig88267.20500.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=273bp
IDFSLDNRLLVIIGWLLIVALGLDSLRKLPIDAVPDVTNVQVQVLTNSPG
LAPQEVESFITFPVETAMSGLPRIEQVRSVSKFGLSVVTVVFEEGTDIYW
ARQLVGERLTEARDSIPDQYGEPGMGPISSGLGEIYQFEVKGEGYTPMHL
RDLLDWSVGYQLRSVPGVVEVNSFGGELRTYQATLDPQKLVSYGISIGKV
FEALERNNRNVGGGYIVHADEQYLVRGEGLIEKLEDLAKVVVSKDDQGTP
VYLENLGEVEFAPMIRQGAVTRD
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mRNA from alignment at M-pyrifera_M_contig88267:3..821-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88267.20500.1 ID=mRNA_M-pyrifera_M_contig88267.20500.1|Name=mRNA_M-pyrifera_M_contig88267.20500.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=819bp|location=Sequence derived from alignment at M-pyrifera_M_contig88267:3..821- (Macrocystis pyrifera P11B4 male)
ATTGACTTTTCGCTCGACAATCGACTCCTCGTCATCATCGGATGGTTGCT GATCGTCGCGCTCGGCCTGGACTCATTACGCAAATTGCCGATCGACGCCG TCCCGGATGTGACCAACGTTCAGGTCCAGGTGCTCACCAACAGCCCTGGC CTCGCCCCCCAAGAGGTCGAGTCCTTCATCACGTTCCCCGTCGAGACCGC GATGAGCGGCCTCCCGCGCATTGAACAGGTCCGCTCGGTCTCCAAGTTCG GGTTGTCCGTCGTCACCGTTGTCTTCGAGGAGGGGACGGACATCTACTGG GCTCGACAACTCGTGGGTGAACGACTCACAGAGGCGCGAGATTCGATTCC CGACCAGTACGGCGAGCCGGGGATGGGGCCGATCTCCTCAGGTCTAGGCG AAATCTACCAGTTCGAAGTCAAGGGTGAGGGCTACACGCCCATGCATCTC CGAGACCTTCTCGACTGGAGCGTCGGATACCAACTGCGCTCTGTGCCAGG TGTTGTCGAAGTCAATTCATTTGGAGGTGAATTGCGCACCTACCAGGCCA CCCTCGATCCGCAGAAGCTTGTCAGCTATGGGATCTCAATTGGAAAGGTA TTTGAAGCGCTCGAACGCAACAATCGAAATGTTGGAGGGGGGTATATCGT TCACGCGGACGAGCAGTACCTTGTTCGCGGAGAAGGTCTGATCGAGAAGC TCGAAGATCTTGCCAAGGTCGTTGTTTCGAAAGATGACCAAGGCACTCCG GTCTATCTCGAGAACCTCGGAGAGGTCGAGTTCGCGCCGATGATCCGACA AGGCGCGGTCACCCGTGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88267:3..821-

>mRNA_M-pyrifera_M_contig88267.20500.1 ID=mRNA_M-pyrifera_M_contig88267.20500.1|Name=mRNA_M-pyrifera_M_contig88267.20500.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1638bp|location=Sequence derived from alignment at M-pyrifera_M_contig88267:3..821- (Macrocystis pyrifera P11B4 male)
ATTGACTTTTCGCTCGACAATCGACTCCTCGTCATCATCGGATGGTTGCT
GATCGTCGCGCTCGGCCTGGACTCATTACGCAAATTGCCGATCGACGCCG
TCCCGGATGTGACCAACGTTCAGGTCCAGGTGCTCACCAACAGCCCTGGC
CTCGCCCCCCAAGAGGTCGAGTCCTTCATCACGTTCCCCGTCGAGACCGC
GATGAGCGGCCTCCCGCGCATTGAACAGGTCCGCTCGGTCTCCAAGTTCG
GGTTGTCCGTCGTCACCGTTGTCTTCGAGGAGGGGACGGACATCTACTGG
GCTCGACAACTCGTGGGTGAACGACTCACAGAGGCGCGAGATTCGATTCC
CGACCAGTACGGCGAGCCGGGGATGGGGCCGATCTCCTCAGGTCTAGGCG
AAATCTACCAGTTCGAAGTCAAGGGTGAGGGCTACACGCCCATGCATCTC
CGAGACCTTCTCGACTGGAGCGTCGGATACCAACTGCGCTCTGTGCCAGG
TGTTGTCGAAGTCAATTCATTTGGAGGTGAATTGCGCACCTACCAGGCCA
CCCTCGATCCGCAGAAGCTTGTCAGCTATGGGATCTCAATTGGAAAGGTA
TTTGAAGCGCTCGAACGCAACAATCGAAATGTTGGAGGGGGGTATATCGT
TCACGCGGACGAGCAGTACCTTGTTCGCGGAGAAGGTCTGATCGAGAAGC
TCGAAGATCTTGCCAAGGTCGTTGTTTCGAAAGATGACCAAGGCACTCCG
GTCTATCTCGAGAACCTCGGAGAGGTCGAGTTCGCGCCGATGATCCGACA
AGGCGCGGTCACCCGTGACATTGACTTTTCGCTCGACAATCGACTCCTCG
TCATCATCGGATGGTTGCTGATCGTCGCGCTCGGCCTGGACTCATTACGC
AAATTGCCGATCGACGCCGTCCCGGATGTGACCAACGTTCAGGTCCAGGT
GCTCACCAACAGCCCTGGCCTCGCCCCCCAAGAGGTCGAGTCCTTCATCA
CGTTCCCCGTCGAGACCGCGATGAGCGGCCTCCCGCGCATTGAACAGGTC
CGCTCGGTCTCCAAGTTCGGGTTGTCCGTCGTCACCGTTGTCTTCGAGGA
GGGGACGGACATCTACTGGGCTCGACAACTCGTGGGTGAACGACTCACAG
AGGCGCGAGATTCGATTCCCGACCAGTACGGCGAGCCGGGGATGGGGCCG
ATCTCCTCAGGTCTAGGCGAAATCTACCAGTTCGAAGTCAAGGGTGAGGG
CTACACGCCCATGCATCTCCGAGACCTTCTCGACTGGAGCGTCGGATACC
AACTGCGCTCTGTGCCAGGTGTTGTCGAAGTCAATTCATTTGGAGGTGAA
TTGCGCACCTACCAGGCCACCCTCGATCCGCAGAAGCTTGTCAGCTATGG
GATCTCAATTGGAAAGGTATTTGAAGCGCTCGAACGCAACAATCGAAATG
TTGGAGGGGGGTATATCGTTCACGCGGACGAGCAGTACCTTGTTCGCGGA
GAAGGTCTGATCGAGAAGCTCGAAGATCTTGCCAAGGTCGTTGTTTCGAA
AGATGACCAAGGCACTCCGGTCTATCTCGAGAACCTCGGAGAGGTCGAGT
TCGCGCCGATGATCCGACAAGGCGCGGTCACCCGTGAC
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