mRNA_M-pyrifera_M_contig88257.20494.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Match: A0A7Y2N8D9_9ACTN (Type II secretion system F family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N8D9_9ACTN) HSP 1 Score: 276 bits (706), Expect = 2.020e-90 Identity = 149/197 (75.63%), Postives = 169/197 (85.79%), Query Frame = 1 Query: 1 VFIPLWMGFMLFVNPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTLPDTMDLLVISVEAGLGFEQALDRVIVNVPGALSDEFSRVLGESRAGSSRADALRAMDVRCDSPEVRSFVLAMIQADTFGVSIGRVLRSQADEMRIKRRQRAQEMAQKAPVKMLIPMVFCIFPALFVVVLGPAIINISKAF 591 VFIP+W+ ML NP LGG+ LA GLG M+GALGP + L KKV+ARQ I R LPDT+DLLVISVEAGLGFEQA+DRVI NVPG LSDEF+RVLGE+RAG+SR+DALR+MD R PE+RSFV++MIQADTFGVSIGRVLRSQADEMRIKRRQRAQE AQKAPVKM+IPMVFCIFPALFVVV+GPA+I+I F Sbjct: 117 VFIPVWLIVMLIWNPFALGGMLQLAATGLGVMIGALGPSNSLKKKVQARQLAIVRQLPDTLDLLVISVEAGLGFEQAVDRVIKNVPGNLSDEFARVLGETRAGASRSDALRSMDERVQVPEIRSFVMSMIQADTFGVSIGRVLRSQADEMRIKRRQRAQESAQKAPVKMMIPMVFCIFPALFVVVIGPAMISIVANF 313
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Match: A0A7Y2DQN3_9ACTN (Type II secretion system F family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DQN3_9ACTN) HSP 1 Score: 273 bits (699), Expect = 2.320e-89 Identity = 149/197 (75.63%), Postives = 168/197 (85.28%), Query Frame = 1 Query: 1 VFIPLWMGFMLFVNPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTLPDTMDLLVISVEAGLGFEQALDRVIVNVPGALSDEFSRVLGESRAGSSRADALRAMDVRCDSPEVRSFVLAMIQADTFGVSIGRVLRSQADEMRIKRRQRAQEMAQKAPVKMLIPMVFCIFPALFVVVLGPAIINISKAF 591 VFIP+W+ ML NP L G+ LA LG M+GALGP + L+K+VEARQ I R LPDT+DLLVISVEAGLGFEQALDRVI NVPG LSDEF+RVLGESRAGSSR+DALRAMD R + PE+RSFV++MIQAD FGVSIGRVLRSQ+DEMRIKRRQ+AQE AQKAPVKM+IPMVFCIFPALFVVVLGPA+I+I F Sbjct: 117 VFIPVWLIVMLIWNPFNLSGLLQLAATALGVMIGALGPSNTLSKRVEARQLAITRQLPDTLDLLVISVEAGLGFEQALDRVINNVPGELSDEFARVLGESRAGSSRSDALRAMDERVNVPEIRSFVMSMIQADQFGVSIGRVLRSQSDEMRIKRRQKAQETAQKAPVKMMIPMVFCIFPALFVVVLGPAMISIIANF 313
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Match: A0A5Q2RF45_9ACTN (Type II secretion system F family protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RF45_9ACTN) HSP 1 Score: 255 bits (651), Expect = 3.990e-82 Identity = 135/185 (72.97%), Postives = 159/185 (85.95%), Query Frame = 1 Query: 37 VNPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTLPDTMDLLVISVEAGLGFEQALDRVIVNVPGALSDEFSRVLGESRAGSSRADALRAMDVRCDSPEVRSFVLAMIQADTFGVSIGRVLRSQADEMRIKRRQRAQEMAQKAPVKMLIPMVFCIFPALFVVVLGPAIINISKAF 591 VNPLG+ G+ A+ G A GP + LN+ VEARQ E++R LPD MD+LVISVEAGLGFEQA+DRV+ +VPGALSDEFSR+LGE RAGSSRADA+RA++ R D PE+RSFVL+++QADTFGVSIGRVLRSQADEMRIKRRQ AQE AQKAPVKM++PMVFC+FPALFVVVLGPAIINI ++F Sbjct: 126 VNPLGMDGMMQHAVFGFAAFALIAGPDAILNRNVEARQYELRRQLPDIMDILVISVEAGLGFEQAIDRVVQSVPGALSDEFSRMLGEVRAGSSRADAMRALEERTDVPEIRSFVLSILQADTFGVSIGRVLRSQADEMRIKRRQLAQERAQKAPVKMMVPMVFCVFPALFVVVLGPAIINIRESF 310
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Match: UPI001D10B900 (type II secretion system F family protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D10B900) HSP 1 Score: 249 bits (637), Expect = 4.800e-80 Identity = 137/184 (74.46%), Postives = 159/184 (86.41%), Query Frame = 1 Query: 37 VNPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTLPDTMDLLVISVEAGLGFEQALDRVIVNVPGALSDEFSRVLGESRAGSSRADALRAMDVRCDSPEVRSFVLAMIQADTFGVSIGRVLRSQADEMRIKRRQRAQEMAQKAPVKMLIPMVFCIFPALFVVVLGPAIINISKA 588 +N LGL G LA+ G+ +V L P LN+KVEARQ EIQ TLPD MDLLVISVEAGLGFEQA+DRV+ +VPG LSDEFSR+LGE+RAG+SR+DA+RAMD RC+ PE+RSFV+A+IQAD FGVSIGRVLR+QADEMRIKRRQ AQE AQKAPVKMLIPMVFCIFPALFVVV+GPAI+NI ++ Sbjct: 124 INLLGLSGNMRLAVPGIIMLVLVLYPDMWLNRKVEARQHEIQITLPDVMDLLVISVEAGLGFEQAIDRVVNSVPGPLSDEFSRMLGETRAGASRSDAMRAMDDRCNVPELRSFVMAIIQADQFGVSIGRVLRAQADEMRIKRRQLAQERAQKAPVKMLIPMVFCIFPALFVVVIGPAIMNIRES 307
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Match: A0A3M2GEL6_ACTSX (Type II secretion system F family protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GEL6_ACTSX) HSP 1 Score: 247 bits (630), Expect = 5.870e-79 Identity = 133/193 (68.91%), Postives = 160/193 (82.90%), Query Frame = 1 Query: 7 IPLWMGFMLFVNPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTLPDTMDLLVISVEAGLGFEQALDRVIVNVPGALSDEFSRVLGESRAGSSRADALRAMDVRCDSPEVRSFVLAMIQADTFGVSIGRVLRSQADEMRIKRRQRAQEMAQKAPVKMLIPMVFCIFPALFVVVLGPAIINISK 585 +PL + + F NP+GLGG + G+ A+V +GP + LN+KVE RQK IQR LPD +DLLVISVEAGLGFEQALDR + +VPG LSDEF R+LGE RAG+SRA+A+RA+D R + PEVRSFVLA++QADTFGVSIGRVLR+QA+EMRIKRRQ AQE AQKAP+KMLIPMVFCIFPALF +VLGPA+I I+ Sbjct: 115 VPLVLWVIYFWNPIGLGGATRPGVAGMLALVLLVGPDASLNRKVEERQKTIQRQLPDIIDLLVISVEAGLGFEQALDRTVRSVPGPLSDEFVRMLGEVRAGASRAEAMRALDARTEVPEVRSFVLAILQADTFGVSIGRVLRAQAEEMRIKRRQLAQEKAQKAPIKMLIPMVFCIFPALFTIVLGPAVIRIAN 307
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Match: UPI001E453B11 (type II secretion system F family protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E453B11) HSP 1 Score: 246 bits (628), Expect = 1.110e-78 Identity = 133/184 (72.28%), Postives = 151/184 (82.07%), Query Frame = 1 Query: 40 NPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTLPDTMDLLVISVEAGLGFEQALDRVIVNVPGALSDEFSRVLGESRAGSSRADALRAMDVRCDSPEVRSFVLAMIQADTFGVSIGRVLRSQADEMRIKRRQRAQEMAQKAPVKMLIPMVFCIFPALFVVVLGPAIINISKAF 591 NPLG G+ L L A GP + LN++VE R E+QR LPD +DLL ISVEAGLGFEQALDR I VPGALSDEF+R+LGE RAG+SRADA+R+M+ R D PEVRSFVLA++QADTFGVSIGRVLR+QADEMRIKRRQ AQE AQKAPVKM+IPMVFCIFPALFVVV+GPAIINI + F Sbjct: 123 NPLGFEGLMQLGAFALLAFALVAGPDAVLNRRVEERANELQRKLPDILDLLTISVEAGLGFEQALDRTIAAVPGALSDEFARMLGEVRAGASRADAMRSMEQRTDVPEVRSFVLAILQADTFGVSIGRVLRAQADEMRIKRRQAAQERAQKAPVKMMIPMVFCIFPALFVVVIGPAIINIREGF 306
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Match: A0A538D7D1_9ACTN (Type II secretion system F family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D7D1_9ACTN) HSP 1 Score: 246 bits (627), Expect = 1.620e-78 Identity = 135/195 (69.23%), Postives = 160/195 (82.05%), Query Frame = 1 Query: 7 IPLWMGFMLFVNPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTLPDTMDLLVISVEAGLGFEQALDRVIVNVPGALSDEFSRVLGESRAGSSRADALRAMDVRCDSPEVRSFVLAMIQADTFGVSIGRVLRSQADEMRIKRRQRAQEMAQKAPVKMLIPMVFCIFPALFVVVLGPAIINISKAF 591 IP+ F + +NPLG G+ L GL M+ LGP + LN++V RQ EI+ LPD +DLLVISVEAGLGFEQALD+ I +VPG LSDEF R+LGE+ AGS RA+ALRAM+ R D PEV+SFVLA+IQADTFG+SIGRVLR QA+E+RI+RRQ+AQEMAQKAPVKMLIPMVFCIFPALF VVLGPA+INISK+F Sbjct: 115 IPVSFWFFMILNPLGQKGMLRLITFGLIVMMLFLGPDAILNRRVSERQYEIRIGLPDVLDLLVISVEAGLGFEQALDKTIASVPGPLSDEFVRMLGETSAGSGRAEALRAMEQRIDIPEVKSFVLAIIQADTFGISIGRVLRGQAEELRIRRRQKAQEMAQKAPVKMLIPMVFCIFPALFAVVLGPALINISKSF 309
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Match: UPI001AA02FCA (type II secretion system F family protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA02FCA) HSP 1 Score: 245 bits (626), Expect = 2.030e-78 Identity = 136/195 (69.74%), Postives = 161/195 (82.56%), Query Frame = 1 Query: 7 IPLWMGFMLFVNPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTLPDTMDLLVISVEAGLGFEQALDRVIVNVPGALSDEFSRVLGESRAGSSRADALRAMDVRCDSPEVRSFVLAMIQADTFGVSIGRVLRSQADEMRIKRRQRAQEMAQKAPVKMLIPMVFCIFPALFVVVLGPAIINISKAF 591 +PL F NPL L G+ LA L + GP + L++KVEARQ ++Q TLPD +DLL ISVEAGLGFEQALDRVIV VPG LS+EF+R+LGE+RAG+SRADA+RA++ R + PEVRSFVLA++QADTFGVSIGRVLR+QA+EMR+KRRQ AQE AQKAPVKMLIPMVFCIFPALFV+VLGPAIINI +AF Sbjct: 111 VPLVFIFAFIWNPLRLEGMTQLAAFLLLSFALLAGPDASLSRKVEARQHQLQVTLPDILDLLTISVEAGLGFEQALDRVIVAVPGPLSEEFARMLGETRAGASRADAMRALEARTNVPEVRSFVLAILQADTFGVSIGRVLRAQAEEMRVKRRQLAQERAQKAPVKMLIPMVFCIFPALFVIVLGPAIINIREAF 305
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Match: A0A0J0V0G7_9ACTN (Flp pilus assembly protein TadC n=6 Tax=root TaxID=1 RepID=A0A0J0V0G7_9ACTN) HSP 1 Score: 242 bits (617), Expect = 5.130e-77 Identity = 132/183 (72.13%), Postives = 155/183 (84.70%), Query Frame = 1 Query: 40 NPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTLPDTMDLLVISVEAGLGFEQALDRVIVNVPGALSDEFSRVLGESRAGSSRADALRAMDVRCDSPEVRSFVLAMIQADTFGVSIGRVLRSQADEMRIKRRQRAQEMAQKAPVKMLIPMVFCIFPALFVVVLGPAIINISKA 588 N GL G LA GL +V +GP S LN+KV ARQ +QR LPDT+DLL ISVEAGLGFEQALDRVI VPG L+DEF+R+LGE+RAG++R+DALRAMD RCD PE+R+FVL++IQAD FGVSIGRVLR+QA+EMRIKRRQ AQE AQKAPVKMLIPMVFCIFPALF+VVLGPA+++I K+ Sbjct: 125 NLSGLTGNMKLAAGGLLMLVLVIGPDSSLNRKVAARQLAMQRALPDTLDLLTISVEAGLGFEQALDRVITAVPGPLTDEFARMLGETRAGAARSDALRAMDERCDVPELRAFVLSIIQADNFGVSIGRVLRAQAEEMRIKRRQLAQERAQKAPVKMLIPMVFCIFPALFLVVLGPAMLSIKKS 307
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Match: A0A7X6AR20_9ACTN (Type II secretion system F family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AR20_9ACTN) HSP 1 Score: 242 bits (617), Expect = 5.290e-77 Identity = 134/197 (68.02%), Postives = 158/197 (80.20%), Query Frame = 1 Query: 1 VFIPLWMGFMLFVNPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTLPDTMDLLVISVEAGLGFEQALDRVIVNVPGALSDEFSRVLGESRAGSSRADALRAMDVRCDSPEVRSFVLAMIQADTFGVSIGRVLRSQADEMRIKRRQRAQEMAQKAPVKMLIPMVFCIFPALFVVVLGPAIINISKAF 591 V +P+ F NPLG+GG + + L A+ LGP ++LN+ VE RQK I R LPD +DLLVISVEAGLGFEQAL R IV+VPG LS+EF+R+LGE RAGS+RA+A+RAMD R + EVRSFVLA++QADTFGVSIGRVLR+QA+EMRIKRRQ AQE AQKAPVKMLIPMVFCIFPALF VVLGPA+I I + F Sbjct: 113 VLVPVSFWFFYIWNPLGVGGNTQMGITALVALTLILGPDAKLNRAVEDRQKSIMRGLPDIIDLLVISVEAGLGFEQALQRTIVSVPGPLSEEFARMLGEVRAGSTRAEAMRAMDARIEVTEVRSFVLAILQADTFGVSIGRVLRAQAEEMRIKRRQLAQEKAQKAPVKMLIPMVFCIFPALFTVVLGPAVIRIMQNF 309 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88257.20494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88257.20494.1 >prot_M-pyrifera_M_contig88257.20494.1 ID=prot_M-pyrifera_M_contig88257.20494.1|Name=mRNA_M-pyrifera_M_contig88257.20494.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=192bp MGFMLFVNPLGLGGIKMLAMLGLGAMVGALGPISQLNKKVEARQKEIQRTback to top mRNA from alignment at M-pyrifera_M_contig88257:218..811- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88257.20494.1 ID=mRNA_M-pyrifera_M_contig88257.20494.1|Name=mRNA_M-pyrifera_M_contig88257.20494.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig88257:218..811- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88257:218..811- >mRNA_M-pyrifera_M_contig88257.20494.1 ID=mRNA_M-pyrifera_M_contig88257.20494.1|Name=mRNA_M-pyrifera_M_contig88257.20494.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1152bp|location=Sequence derived from alignment at M-pyrifera_M_contig88257:218..811- (Macrocystis pyrifera P11B4 male)back to top |