mRNA_M-pyrifera_M_contig88197.20487.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Match: A0A5A8D8M9_CAFRO (MFS domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D8M9_CAFRO) HSP 1 Score: 180 bits (456), Expect = 2.280e-50 Identity = 85/147 (57.82%), Postives = 116/147 (78.91%), Query Frame = 1 Query: 4 FVSSSLFVGMLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPS--WELIAAARVCSGIGVGGSIPVVFTLFAEYLPMQDRGFYLSIIAWFWMVGSIYAAGLAWVMIGILDIHWRYFMAAAVLPSLLATLLTFFTLPESPRF 438 F+S+++F GMLVGGVLAG +D FGR+P LM SLG+N +FG++SA P+ W ++AA R+ +G+GVGGSIP VFTL++EYLP++ RGF+LSI+AWFWMVGSIYAAG+AW++I + WR F AA P+ +A + + F LPESPR+ Sbjct: 133 FLSAAVFAGMLVGGVLAGIGADAFGRKPMLMASLGINALFGVVSAFTPAGLWPMLAACRIMAGVGVGGSIPSVFTLYSEYLPVKGRGFWLSIVAWFWMVGSIYAAGIAWILISLAGTDWRVFAAACAAPAFVAFVASGFLLPESPRY 279
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Match: L8GVP8_ACACA (Transporter, major facilitator subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVP8_ACACA) HSP 1 Score: 175 bits (443), Expect = 1.430e-49 Identity = 81/146 (55.48%), Postives = 112/146 (76.71%), Query Frame = 1 Query: 1 GFVSSSLFVGMLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPSWELIAAARVCSGIGVGGSIPVVFTLFAEYLPMQDRGFYLSIIAWFWMVGSIYAAGLAWVMIGILDIHWRYFMAAAVLPSLLATLLTFFTLPESPRF 438 G +S+++F GMLVGG++AG LSD+ GR+P L+ SL +N FGL SA AP+W ++ RV SG+GVGGS+P V+T+ E LP+ RGFY++I+AW+WMVG+I AGLAW+M+G LD+ WR+F A +PSL+ +L+ F LPESPRF Sbjct: 82 GALSAAMFGGMLVGGMVAGLLSDRLGRKPCLLASLFINAFFGLASAFAPNWVMLVVFRVLSGVGVGGSVPSVWTMATEILPLHRRGFYITIVAWWWMVGTIGTAGLAWIMLGALDLSWRWFAGACAIPSLVCGVLSIFVLPESPRF 227
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Match: A0A5A8C2S2_CAFRO (MFS domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C2S2_CAFRO) HSP 1 Score: 178 bits (452), Expect = 1.460e-49 Identity = 84/147 (57.14%), Postives = 116/147 (78.91%), Query Frame = 1 Query: 4 FVSSSLFVGMLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPS--WELIAAARVCSGIGVGGSIPVVFTLFAEYLPMQDRGFYLSIIAWFWMVGSIYAAGLAWVMIGILDIHWRYFMAAAVLPSLLATLLTFFTLPESPRF 438 F+S+++F GML+GGVLAG +D GR+P LM SLG+N +FG++SA P+ W ++AA R+ +G+GVGGSIP VFTL++EYLP++ RGF+LSI+AWFWMVGSIYAAG+AW++I + WR F AA P+L+A + + F LPESPR+ Sbjct: 198 FLSAAVFAGMLLGGVLAGIGADALGRKPMLMASLGINALFGIVSAFTPAGLWPMLAACRIMAGVGVGGSIPSVFTLYSEYLPVKGRGFWLSIVAWFWMVGSIYAAGIAWILISLAGTDWRVFAAACAAPALVAFVASGFLLPESPRY 344
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Match: A0A0L0D841_THETB (Major facilitator superfamily transporter n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D841_THETB) HSP 1 Score: 172 bits (436), Expect = 1.670e-48 Identity = 81/146 (55.48%), Postives = 108/146 (73.97%), Query Frame = 1 Query: 1 GFVSSSLFVGMLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPSWELIAAARVCSGIGVGGSIPVVFTLFAEYLPMQDRGFYLSIIAWFWMVGSIYAAGLAWVMIGILDIHWRYFMAAAVLPSLLATLLTFFTLPESPRF 438 GF+S+++FVGML+GG+ G SD+ GR+ L+ SLG+N + GL SA APSW L+ AR+ SGIGVGGS+P VFT+ EYLP+ RGFYL+++AW WMVGSI+ A LAW+++G + WR F AA P+ LA +LT LPE+PRF Sbjct: 121 GFLSAAVFVGMLIGGLFCGLASDRVGRKAMLLWSLGINALAGLASAAAPSWPLLLTARIISGIGVGGSVPSVFTMAVEYLPVHRRGFYLTVVAWHWMVGSIFTASLAWILLGAIGASWRVFAAACAGPAALAFVLTLVLLPETPRF 266
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Match: A0A6H5KBE1_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBE1_9PHAE) HSP 1 Score: 139 bits (351), Expect = 2.030e-38 Identity = 78/152 (51.32%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 7 VSSSLFVGMLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPSWELIAAARVCSGIGVGGSIPVVFTLFAEYLPMQDRGFYLSIIAWFWMVGSIYAAGLAWVMIG--------ILDIHWRYFMAAAVLPSLLATLLTFFTLPESPRF 438 +++++FVGMLVGG+LAGS +D+ GRR L+ L +N F +SA APS + AARVC+G+GVGGSIPVVFTL AE + RG +S+IA FWMVGS +AA AWV++G WR++ A LP++ A LLTF +PESPRF Sbjct: 85 LTAAVFVGMLVGGILAGSAADRLGRRNCLLTFLAMNCTFASISAAAPSVGWLIAARVCAGLGVGGSIPVVFTLGAELFATRIRGAMVSLIASFWMVGSAFAAIAAWVVLGDGFGGRRIFPGGTWRHYALVAALPAVAALLLTFIFVPESPRF 236
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Match: A0A7S3HJH3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJH3_9STRA) HSP 1 Score: 144 bits (362), Expect = 5.690e-38 Identity = 72/153 (47.06%), Postives = 106/153 (69.28%), Query Frame = 1 Query: 4 FVSSSLFVGMLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPSWELIAAARVCSGIGVGGSIPVVFTLFAEYLPMQDRGFYLSIIAWFWMVGSIYAAGLAWVMIG--------ILDIHWRYFMAAAVLPSLLATLLTFFTLPESPRF 438 F+S+++F+GML GG++ G SD GRRP L+ SLG+N++ GL SA AP+ +++ A RV G+G+GGS+P+VF++ AE P RG YLS+IA FWMVG+++ A AW+M+G + ++WR F + LP++LA LT +PESPRF Sbjct: 20 FLSAAVFMGMLFGGIICGYASDVVGRRPCLLYSLGLNLLAGLASAAAPNVDVLIACRVIGGLGIGGSVPIVFSMGAEIFPSHVRGQYLSVIASFWMVGAVFTAFSAWIMLGNDFYGQKMMPGVNWRAFALVSALPAILAMFLTHRNIPESPRF 172
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Match: A0A225WUC3_9STRA (Synaptic vesicle glycoprotein 2A n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WUC3_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.770e-37 Identity = 68/146 (46.58%), Postives = 106/146 (72.60%), Query Frame = 1 Query: 7 VSSSLFVGMLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPSWELIAAARVCSGIGVGGSIPVVFTLFAEYLPMQDRGFYLSIIAWFWMVGSIYAAGLAWVMIGILDI--HWRYFMAAAVLPSLLATLLTFFTLPESPRF 438 +++++F GM GG+L GSLSD+ GRR +L+ SL +N VFGLLSA++P+ + R C+G+G+GG++P +FTL +E++P RG+Y++I+A +WMVG+++ AGLAW M+G + WR F A A LPS + +LT+ +PES +F Sbjct: 66 LAAAIFAGMFTGGLLFGSLSDRIGRRKSLLHSLLLNAVFGLLSALSPNVYTLIVFRTCAGVGIGGTVPALFTLSSEHVPANRRGYYVTIVAAYWMVGAVFTAGLAWFMLGSPGVVYSWRTFAAIASLPSFMGWMLTYKYVPESAQF 211
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Match: K3XAV2_GLOUD (MFS domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAV2_GLOUD) HSP 1 Score: 141 bits (355), Expect = 7.310e-37 Identity = 68/146 (46.58%), Postives = 106/146 (72.60%), Query Frame = 1 Query: 7 VSSSLFVGMLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPSWELIAAARVCSGIGVGGSIPVVFTLFAEYLPMQDRGFYLSIIAWFWMVGSIYAAGLAWVMIGILDIH--WRYFMAAAVLPSLLATLLTFFTLPESPRF 438 +++++F GM VGG+ G+LSD+ GRR +L+ SL VN +F LLS+V+P+ + A R C+GIG+GG++P +FTL +E++P+ RGFY++I+A +WMVGS++ AGLAW M+G D H WR F A +P+ + LT+ +PES ++ Sbjct: 62 LAAAIFAGMFVGGIFFGALSDQIGRRKSLLYSLLVNALFALLSSVSPNIYALIAFRTCAGIGIGGTVPAMFTLCSEHVPVNRRGFYVTIVASYWMVGSVFTAGLAWFMLGNPDSHYSWRSFAAIVSIPAFVCWYLTYQYVPESAQY 207
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Match: W2QKP3_PHYPN (MFS domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2QKP3_PHYPN) HSP 1 Score: 140 bits (354), Expect = 8.880e-37 Identity = 69/146 (47.26%), Postives = 106/146 (72.60%), Query Frame = 1 Query: 7 VSSSLFVGMLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPSWELIAAARVCSGIGVGGSIPVVFTLFAEYLPMQDRGFYLSIIAWFWMVGSIYAAGLAWVMIGILDI--HWRYFMAAAVLPSLLATLLTFFTLPESPRF 438 +++++F GM GG+L GSLSD+ GRR +L+ SL +N +FGLLSA++P+ + A R C+GIG+GG++P +FTL +E++P RG+Y++I+A +WMVG+++ AGLAW M+G D WR F A LPS + +LT+ +PES +F Sbjct: 74 LAAAIFAGMFTGGLLFGSLSDRIGRRKSLLYSLLLNGIFGLLSALSPNVYALIAFRTCAGIGIGGTVPALFTLCSEHVPANRRGYYVTIVAAYWMVGAVFTAGLAWFMLGRPDAMYSWRAFAAIVSLPSFVCWMLTYKYVPESAQF 219
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Match: A0A482T2B5_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2B5_9ARCH) HSP 1 Score: 140 bits (354), Expect = 9.330e-37 Identity = 76/154 (49.35%), Postives = 104/154 (67.53%), Query Frame = 1 Query: 4 FVSSSLFVGMLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPSWELIAAARVCSGIGVGGSIPVVFTLFAEYLPMQDRGFYLSIIAWFWMVGSIYAAGLAWVMIGILDIH---------WRYFMAAAVLPSLLATLLTFFTLPESPRF 438 F+SS++FVGML GG+L G SD GRR +L+ +L +N V G+LSA A E++ RV GIG+GGS+P+VF++ AE P RG LS+IA FWM+G+IY A AW+++G DI+ WR F A + +P+ +A LLT+F LPESPRF Sbjct: 76 FLSSAVFVGMLFGGLLGGYFSDVIGRRRSLLLALLLNAVAGVLSAAAVGIEMLIVLRVIGGIGIGGSVPIVFSMGAEVFPSDKRGHLLSVIASFWMIGAIYTAFTAWILLG-KDINGVRICPRGNWRIFAAVSAVPAFVALLLTYFRLPESPRF 228 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88197.20487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88197.20487.1 >prot_M-pyrifera_M_contig88197.20487.1 ID=prot_M-pyrifera_M_contig88197.20487.1|Name=mRNA_M-pyrifera_M_contig88197.20487.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp MLVGGVLAGSLSDKFGRRPTLMGSLGVNVVFGLLSAVAPSWELIAAARVCback to top mRNA from alignment at M-pyrifera_M_contig88197:224..661+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88197.20487.1 ID=mRNA_M-pyrifera_M_contig88197.20487.1|Name=mRNA_M-pyrifera_M_contig88197.20487.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig88197:224..661+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88197:224..661+ >mRNA_M-pyrifera_M_contig88197.20487.1 ID=mRNA_M-pyrifera_M_contig88197.20487.1|Name=mRNA_M-pyrifera_M_contig88197.20487.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig88197:224..661+ (Macrocystis pyrifera P11B4 male)back to top |