mRNA_M-pyrifera_M_contig88177.20479.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88177.20479.1
Unique NamemRNA_M-pyrifera_M_contig88177.20479.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Match: A0A3L6V125_9STRA (PROCN domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V125_9STRA)

HSP 1 Score: 513 bits (1322), Expect = 8.810e-178
Identity = 247/273 (90.48%), Postives = 258/273 (94.51%), Query Frame = 1 
Query:    4 EHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYIFCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNFDLELRAAVMVDILDMMPEGVKANK 822
            EHCPP  P KVRVSYQKLLKC+VLN L  RPPK+LNK+YLF+S  +TKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKP+KTLTTKERKKSRFGNAFHL REILRLTKL+VD+HVQYRL NVDAFQLADGL YIF HVGQLTGMYRYKYRLMRQ+RM KDLKHL+YYRFNTGPVGKGPG GFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVES+FDLELRAAVM DILDMMPEGVKANK
Sbjct:  104 EHCPPNQPVKVRVSYQKLLKCWVLNHLHSRPPKALNKKYLFKSLKSTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPIKTLTTKERKKSRFGNAFHLTREILRLTKLLVDAHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYRLMRQVRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESHFDLELRAAVMHDILDMMPEGVKANK 376
[Close]
BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Match: A0A1D6NUI8_MAIZE (Pre-mRNA-processing-splicing factor 8A n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6NUI8_MAIZE)

HSP 1 Score: 499 bits (1286), Expect = 3.720e-176
Identity = 237/273 (86.81%), Postives = 254/273 (93.04%), Query Frame = 1 
Query:    4 EHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYIFCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNFDLELRAAVMVDILDMMPEGVKANK 822
            EHCPP  P KVRVSYQKLLKC+VLN+L HRPPK+  K++LFRS   TKFFQ+TELDW EAGLQVC+QGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKL+VD+++Q+RL NVDAFQLADGL YIF HVGQLTGMYRYKYRLMRQIRM KDLKHL+YYRFNTGPVGKGPG GFWAP WRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKG+AKTVTKQRVES+FDLELRAAVM D+LD MPEG+K NK
Sbjct:   21 EHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNK 293
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BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Match: A0A3L6VBU4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VBU4_9STRA)

HSP 1 Score: 513 bits (1322), Expect = 3.030e-173
Identity = 247/273 (90.48%), Postives = 258/273 (94.51%), Query Frame = 1 
Query:    4 EHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYIFCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNFDLELRAAVMVDILDMMPEGVKANK 822
            EHCPP  P KVRVSYQKLLKC+VLN L  RPPK+LNK+YLF+S  +TKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKP+KTLTTKERKKSRFGNAFHL REILRLTKL+VD+HVQYRL NVDAFQLADGL YIF HVGQLTGMYRYKYRLMRQ+RM KDLKHL+YYRFNTGPVGKGPG GFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVES+FDLELRAAVM DILDMMPEGVKANK
Sbjct:  461 EHCPPNQPVKVRVSYQKLLKCWVLNHLHSRPPKALNKKYLFKSLKSTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPIKTLTTKERKKSRFGNAFHLTREILRLTKLLVDAHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYRLMRQVRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESHFDLELRAAVMHDILDMMPEGVKANK 733
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BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Match: A0A7L3HCZ3_9PASS (PRP8 factor (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L3HCZ3_9PASS)

HSP 1 Score: 504 bits (1298), Expect = 1.510e-172
Identity = 241/273 (88.28%), Postives = 253/273 (92.67%), Query Frame = 1 
Query:    4 EHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYIFCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNFDLELRAAVMVDILDMMPEGVKANK 822
            EHCP   P KVRVSYQKLLK +VLN L+HRPPK+  KRYLFRSF  TKFFQST+LDWVE GLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCRE+LRLTKL+VDSHVQYRL NVDAFQLADGL YIF HVGQLTGMYRYKY+LMRQIRM KDLKHL+YYRFNTGPVGKGPG GFWAP WRVWLFF+RGI PLLERWLGNLLARQFEGRHSKG+AKTVTKQRVES+FDLELRAAVM DILDMMPEG+K NK
Sbjct:  270 EHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNK 542
[Close]
BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Match: A0A1B6IB91_9HEMI (PROCN domain-containing protein (Fragment) n=7 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6IB91_9HEMI)

HSP 1 Score: 499 bits (1284), Expect = 1.530e-172
Identity = 238/273 (87.18%), Postives = 253/273 (92.67%), Query Frame = 1 
Query:    4 EHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYIFCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNFDLELRAAVMVDILDMMPEGVKANK 822
            EH PP  P KVRVSYQKLLK +VLN L+HRPPK   KRYLFRSF +TKFFQ+T LDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLI+DSHVQYRL NVDAFQLADGL Y+F HVGQLTGMYRYKY+LMRQIRM KDLKHL+YYRFNTGPVGKGPG GFWAP WRVWLFF+RGI PLLERWLGNLL+RQFEGRHSKG+AKTVTKQRVES+FDLELRA+VM DI+DMMPEG+K NK
Sbjct:  204 EHVPPCQPVKVRVSYQKLLKYYVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLADGLQYVFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNK 476
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BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Match: A0A182SAD8_9DIPT (PROCN domain-containing protein n=1 Tax=Anopheles maculatus TaxID=74869 RepID=A0A182SAD8_9DIPT)

HSP 1 Score: 499 bits (1286), Expect = 3.540e-172
Identity = 239/273 (87.55%), Postives = 253/273 (92.67%), Query Frame = 1 
Query:    4 EHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYIFCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNFDLELRAAVMVDILDMMPEGVKANK 822
            EHCPP +P KVRVSYQKLLK +VLN L+HR PK   KRYLFRSF  TKFFQ+T LDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLI+DSHVQYRL NVDAFQLADGL YIF HVGQLTGMYRYKY+LMRQIRM KDLKHL+YYRFNTGPVGKGPG GFWAP WRVWLFF+RGI PLLERWLGNLL+RQFEGRHSKG+AKTVTKQRVES+FDLELRA+VM DI+DMMPEG+K NK
Sbjct:  111 EHCPPGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRYLFRSFKATKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNK 383
[Close]
BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Match: A0A1Z5L689_ORNMO (Acetyl-CoA acetyltransferase mitochondrial (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5L689_ORNMO)

HSP 1 Score: 505 bits (1300), Expect = 4.440e-172
Identity = 242/273 (88.64%), Postives = 254/273 (93.04%), Query Frame = 1 
Query:    4 EHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYIFCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNFDLELRAAVMVDILDMMPEGVKANK 822
            EHCPP  P KVRVSYQKLLK FVLN L+HRPPK   KRYLFRSF +TKFFQ+T +DWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKL+VDSHVQYRL NVDAFQLADGL YIF HVGQLTGMYRYKY+LMRQIRM KDLKHL+YYRFNTGPVGKGPG GFWAP WRVWLFFLRGI PLLERWLGNLL+RQFEGRHSKG+AKTVTKQRVES+FDLELRA+VM DILDMMPEG+K NK
Sbjct:  459 EHCPPGMPVKVRVSYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDSHVQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFLRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDILDMMPEGIKQNK 731
[Close]
BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Match: A0A1B6M7Q7_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6M7Q7_9HEMI)

HSP 1 Score: 499 bits (1285), Expect = 1.500e-171
Identity = 238/273 (87.18%), Postives = 253/273 (92.67%), Query Frame = 1 
Query:    4 EHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYIFCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNFDLELRAAVMVDILDMMPEGVKANK 822
            EH PP  P KVRVSYQKLLK +VLN L+HRPPK   KRYLFRSF +TKFFQ+T LDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLI+DSHVQYRL NVDAFQLADGL Y+F HVGQLTGMYRYKY+LMRQIRM KDLKHL+YYRFNTGPVGKGPG GFWAP WRVWLFF+RGI PLLERWLGNLL+RQFEGRHSKG+AKTVTKQRVES+FDLELRA+VM DI+DMMPEG+K NK
Sbjct:  308 EHVPPGQPVKVRVSYQKLLKYYVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLADGLQYVFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNK 580
[Close]
BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Match: A0A7S0VD56_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VD56_9CRYP)

HSP 1 Score: 503 bits (1295), Expect = 4.230e-171
Identity = 240/273 (87.91%), Postives = 255/273 (93.41%), Query Frame = 1 
Query:    4 EHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYIFCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNFDLELRAAVMVDILDMMPEGVKANK 822
            EHCPP +  KVRVSYQKLLKC+VLNKL HR PKSLNKRYLF+    TKFFQ TE+DWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTK++VDS+VQ+RL NVDAFQLADGL Y F HVGQLTGMYRYKY+LMRQIRM KDLKHL+YYRFNTGPVGKGPG+GFWAP WRVWLFFLRG+VPLLERWLGNLLARQFEGRHSKG+AKTVTKQRVES++DLELRAAVM DILDMMPEGVK NK
Sbjct:  154 EHCPPGHAVKVRVSYQKLLKCYVLNKLHHRHPKSLNKRYLFKILKATKFFQGTEIDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKIVVDSNVQFRLGNVDAFQLADGLQYTFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGVGFWAPGWRVWLFFLRGVVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHYDLELRAAVMHDILDMMPEGVKQNK 426
[Close]
BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Match: A0A3S2PMF2_ORYJA (Uncharacterized protein n=1 Tax=Oryzias javanicus TaxID=123683 RepID=A0A3S2PMF2_ORYJA)

HSP 1 Score: 503 bits (1294), Expect = 6.900e-171
Identity = 240/273 (87.91%), Postives = 253/273 (92.67%), Query Frame = 1 
Query:    4 EHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYIFCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWAPAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNFDLELRAAVMVDILDMMPEGVKANK 822
            EHCP   P KVRVSYQKLLK +VLN L+HRPPK+  KRYLFRSF  TKFFQST+LDWVE GLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCRE+LRL+KL+VDSHVQYRL NVDAFQLADGL YIF HVGQLTGMYRYKY+LMRQIRM KDLKHL+YYRFNTGPVGKGPG GFWAP WRVWLFF+RGI PLLERWLGNLLARQFEGRHSKG+AKTVTKQRVES+FDLELRAAVM DILDMMPEG+K NK
Sbjct:  452 EHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNK 724
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88177.20479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3L6V125_9STRA8.810e-17890.48PROCN domain-containing protein (Fragment) n=1 Tax... [more]
A0A1D6NUI8_MAIZE3.720e-17686.81Pre-mRNA-processing-splicing factor 8A n=2 Tax=Zea... [more]
A0A3L6VBU4_9STRA3.030e-17390.48Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A7L3HCZ3_9PASS1.510e-17288.28PRP8 factor (Fragment) n=4 Tax=Neognathae TaxID=88... [more]
A0A1B6IB91_9HEMI1.530e-17287.18PROCN domain-containing protein (Fragment) n=7 Tax... [more]
A0A182SAD8_9DIPT3.540e-17287.55PROCN domain-containing protein n=1 Tax=Anopheles ... [more]
A0A1Z5L689_ORNMO4.440e-17288.64Acetyl-CoA acetyltransferase mitochondrial (Fragme... [more]
A0A1B6M7Q7_9HEMI1.500e-17187.18Uncharacterized protein (Fragment) n=1 Tax=Graphoc... [more]
A0A7S0VD56_9CRYP4.230e-17187.91Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A3S2PMF2_ORYJA6.900e-17187.91Uncharacterized protein n=1 Tax=Oryzias javanicus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88177contigM-pyrifera_M_contig88177:2..823 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score518.8
Seed ortholog evalue1.5e-144
Seed eggNOG ortholog4792.ETI50087
KEGG koko:K12856
KEGG Pathwayko03040,map03040
KEGG ModuleM00354,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000244,GO:0000375,GO:0000377,GO:0000386,GO:0000387,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005682,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0017069,GO:0017070,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0030619,GO:0030620,GO:0030623,GO:0032991,GO:0034622,GO:0034641,GO:0036002,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097157,GO:0097159,GO:0097525,GO:0120114,GO:0140098,GO:1901360,GO:1901363,GO:1902494,GO:1990904
EggNOG free text desc.U5 snRNA binding
EggNOG OGs3QE5W@4776,COG5178@1,KOG1795@2759
COG Functional cat.A
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons1
Model size822
Cds size822
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816791.17961-CDS-M-pyrifera_M_contig88177:1..8231622816791.17961-CDS-M-pyrifera_M_contig88177:1..823Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88177 2..823 -
1692278180.4472055-CDS-M-pyrifera_M_contig88177:1..8231692278180.4472055-CDS-M-pyrifera_M_contig88177:1..823Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88177 2..823 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88177.20479.1prot_M-pyrifera_M_contig88177.20479.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88177 2..823 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88177.20479.1

>prot_M-pyrifera_M_contig88177.20479.1 ID=prot_M-pyrifera_M_contig88177.20479.1|Name=mRNA_M-pyrifera_M_contig88177.20479.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp
MEHCPPKNPTKVRVSYQKLLKCFVLNKLRHRPPKSLNKRYLFRSFANTKF
FQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLT
TKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLANVDAFQLADGLHYI
FCHVGQLTGMYRYKYRLMRQIRMTKDLKHLLYYRFNTGPVGKGPGMGFWA
PAWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGIAKTVTKQRVESNF
DLELRAAVMVDILDMMPEGVKANK
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mRNA from alignment at M-pyrifera_M_contig88177:2..823-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88177.20479.1 ID=mRNA_M-pyrifera_M_contig88177.20479.1|Name=mRNA_M-pyrifera_M_contig88177.20479.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig88177:2..823- (Macrocystis pyrifera P11B4 male)
ATGGAGCACTGCCCACCGAAGAACCCCACGAAGGTGAGAGTGAGCTACCA
GAAGCTCCTCAAGTGCTTCGTGCTCAACAAGCTCCGGCACAGGCCTCCCA
AGAGCCTCAACAAGAGGTACCTCTTCCGCTCCTTTGCCAACACCAAGTTC
TTCCAGTCGACGGAGCTGGACTGGGTCGAGGCTGGTCTGCAGGTCTGCAG
GCAGGGCTACAACATGTTGAACCTCCTCATTCACAGGAAGAACCTCAACT
ACCTGCACCTGGACTACAACTTCAACCTCAAGCCTGTGAAGACCCTCACT
ACCAAGGAGAGGAAGAAGTCGCGCTTCGGAAACGCTTTCCATCTCTGCCG
TGAGATCCTTCGCCTCACAAAGCTGATCGTGGACAGCCACGTTCAGTACC
GCCTTGCCAACGTCGACGCCTTCCAGCTTGCCGACGGCCTCCACTACATC
TTCTGTCACGTGGGGCAGCTGACGGGCATGTACCGCTACAAGTACCGCCT
GATGCGGCAGATTCGCATGACGAAGGACCTCAAGCACCTCCTTTACTACC
GCTTCAACACTGGCCCAGTGGGCAAGGGCCCAGGCATGGGTTTCTGGGCT
CCGGCGTGGAGGGTGTGGCTCTTCTTCCTGCGAGGCATTGTGCCTCTGCT
TGAGCGCTGGCTCGGCAACCTTCTCGCCAGGCAGTTCGAGGGTCGTCACA
GCAAGGGCATCGCCAAGACTGTGACTAAGCAGCGTGTGGAGTCGAACTTC
GATCTCGAGCTGCGTGCTGCTGTCATGGTGGACATTCTCGACATGATGCC
CGAGGGTGTCAAGGCCAACAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88177:2..823-

>mRNA_M-pyrifera_M_contig88177.20479.1 ID=mRNA_M-pyrifera_M_contig88177.20479.1|Name=mRNA_M-pyrifera_M_contig88177.20479.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1644bp|location=Sequence derived from alignment at M-pyrifera_M_contig88177:2..823- (Macrocystis pyrifera P11B4 male)
ATGGAGCACTGCCCACCGAAGAACCCCACGAAGGTGAGAGTGAGCTACCA
GAAGCTCCTCAAGTGCTTCGTGCTCAACAAGCTCCGGCACAGGCCTCCCA
AGAGCCTCAACAAGAGGTACCTCTTCCGCTCCTTTGCCAACACCAAGTTC
TTCCAGTCGACGGAGCTGGACTGGGTCGAGGCTGGTCTGCAGGTCTGCAG
GCAGGGCTACAACATGTTGAACCTCCTCATTCACAGGAAGAACCTCAACT
ACCTGCACCTGGACTACAACTTCAACCTCAAGCCTGTGAAGACCCTCACT
ACCAAGGAGAGGAAGAAGTCGCGCTTCGGAAACGCTTTCCATCTCTGCCG
TGAGATCCTTCGCCTCACAAAGCTGATCGTGGACAGCCACGTTCAGTACC
GCCTTGCCAACGTCGACGCCTTCCAGCTTGCCGACGGCCTCCACTACATC
TTCTGTCACGTGGGGCAGCTGACGGGCATGTACCGCTACAAGTACCGCCT
GATGCGGCAGATTCGCATGACGAAGGACCTCAAGCACCTCCTTTACTACC
GCTTCAACACTGGCCCAGTGGGCAAGGGCCCAGGCATGGGTTTCTGGGCT
CCGGCGTGGAGGGTGTGGCTCTTCTTCCTGCGAGGCATTGTGCCTCTGCT
TGAGCGCTGGCTCGGCAACCTTCTCGCCAGGCAGTTCGAGGGTCGTCACA
GCAAGGGCATCGCCAAGACTGTGACTAAGCAGCGTGTGGAGTCGAACTTC
GATCTCGAGCTGCGTGCTGCTGTCATGGTGGACATTCTCGACATGATGCC
CGAGGGTGTCAAGGCCAACAAGATGGAGCACTGCCCACCGAAGAACCCCA
CGAAGGTGAGAGTGAGCTACCAGAAGCTCCTCAAGTGCTTCGTGCTCAAC
AAGCTCCGGCACAGGCCTCCCAAGAGCCTCAACAAGAGGTACCTCTTCCG
CTCCTTTGCCAACACCAAGTTCTTCCAGTCGACGGAGCTGGACTGGGTCG
AGGCTGGTCTGCAGGTCTGCAGGCAGGGCTACAACATGTTGAACCTCCTC
ATTCACAGGAAGAACCTCAACTACCTGCACCTGGACTACAACTTCAACCT
CAAGCCTGTGAAGACCCTCACTACCAAGGAGAGGAAGAAGTCGCGCTTCG
GAAACGCTTTCCATCTCTGCCGTGAGATCCTTCGCCTCACAAAGCTGATC
GTGGACAGCCACGTTCAGTACCGCCTTGCCAACGTCGACGCCTTCCAGCT
TGCCGACGGCCTCCACTACATCTTCTGTCACGTGGGGCAGCTGACGGGCA
TGTACCGCTACAAGTACCGCCTGATGCGGCAGATTCGCATGACGAAGGAC
CTCAAGCACCTCCTTTACTACCGCTTCAACACTGGCCCAGTGGGCAAGGG
CCCAGGCATGGGTTTCTGGGCTCCGGCGTGGAGGGTGTGGCTCTTCTTCC
TGCGAGGCATTGTGCCTCTGCTTGAGCGCTGGCTCGGCAACCTTCTCGCC
AGGCAGTTCGAGGGTCGTCACAGCAAGGGCATCGCCAAGACTGTGACTAA
GCAGCGTGTGGAGTCGAACTTCGATCTCGAGCTGCGTGCTGCTGTCATGG
TGGACATTCTCGACATGATGCCCGAGGGTGTCAAGGCCAACAAG
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