mRNA_M-pyrifera_M_contig88043.20456.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88043.20456.1
Unique NamemRNA_M-pyrifera_M_contig88043.20456.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Match: A0A812NLM5_SYMPI (Sec61a protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812NLM5_SYMPI)

HSP 1 Score: 279 bits (713), Expect = 6.260e-92
Identity = 137/217 (63.13%), Postives = 171/217 (78.80%), Query Frame = 1 
Query:   25 LIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGVRPT-SGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSKRDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLVVAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQGAEFHGAIIALFHLLMTRSDKLGAL 672
            ++P +  P   +   +KI WT ++L  FLVCCQIPLYG+    S DPFYWMRVI+ASN+GTLMELGISPI+TSGM++QLL G +L+EVDQ  K DR L  AA K+F +VITLG+A  Y LSG +GPV ++GA  A+LII QL  AG+IV++LDELLQKGYG+G+GISLFIAT+ CE I W AFSPTT+N G+G EF GA+IALFHLL++RSDK+ AL
Sbjct:    3 VLPEVSTPDRRIPFREKILWTGISLFVFLVCCQIPLYGISANKSTDPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSKLLEVDQSVKEDRMLFQAAQKLFGMVITLGQAMAYVLSGMYGPVQDLGAGNAILIIVQLFCAGVIVLILDELLQKGYGLGSGISLFIATNICETICWKAFSPTTMNTGKGPEFEGAVIALFHLLISRSDKITAL 219
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BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Match: H3G9A5_PHYRM (Plug_translocon domain-containing protein n=30 Tax=Oomycota TaxID=4762 RepID=H3G9A5_PHYRM)

HSP 1 Score: 285 bits (729), Expect = 2.330e-91
Identity = 137/224 (61.16%), Postives = 178/224 (79.46%), Query Frame = 1 
Query:    4 FLEPVKDLIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGVRPT-SGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSKRDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLVVAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQGAEFHGAIIALFHLLMTRSDKLGAL 672
             + PV  ++P + +P  ++   +K+ WT +TL  FLVCCQIPLYG++ + S DP YWMRVI+ASN+GTLMELGISPI+TSG+++QLL G +++EVDQ  K DR L   A K+F ++ITLGEA  Y +SG +G +S+IGA  A+LII QL+ AG++V++LDE+LQKGYG+G+GISLFIAT+ CE IVW AFSPTTIN G+G EF GAIIALFHLL+TRSDKL AL
Sbjct:    6 LIRPVMCVLPEVAQPDRKIPFREKVLWTIITLFIFLVCCQIPLYGIQTSKSSDPLYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSKMIEVDQTLKEDRALFSGAQKLFGILITLGEAVAYVVSGMYGNISDIGAFNAILIIVQLLCAGVLVIILDEMLQKGYGLGSGISLFIATNICENIVWKAFSPTTINTGRGTEFEGAIIALFHLLITRSDKLRAL 229
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BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Match: A0A7J6LHU1_PEROL (Protein transport protein Sec61 subunit alpha n=5 Tax=Perkinsus TaxID=28000 RepID=A0A7J6LHU1_PEROL)

HSP 1 Score: 284 bits (726), Expect = 5.900e-91
Identity = 141/225 (62.67%), Postives = 173/225 (76.89%), Query Frame = 1 
Query:    1 DFLEPVKDLIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGVRPT-SGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSKRDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLVVAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQGAEFHGAIIALFHLLMTRSDKLGAL 672
            D + P   L+P +  P   +   +KI WTAM L  +LVCCQIPLYG+    + DPFYWMRVI+ASN+GTLMELGISPIITSGMI+QLL G +++EVDQ  K DR L + A K+  ++I LGEAA Y +SG +G V+EIGA  ALLII QL  AG+IV+LLDELLQKGYG+G+GISLFIAT+ CE ++W AFSPTT+N G+G EF GAIIALFHL+ TR+DKL AL
Sbjct:    5 DLVRPAMFLMPEVASPDRRIPFKEKILWTAMALFIYLVCCQIPLYGIATNKNADPFYWMRVILASNRGTLMELGISPIITSGMIMQLLAGSKIIEVDQSLKEDRALFNGAQKLLGILIILGEAAAYVMSGMYGDVTEIGAGNALLIIIQLFFAGVIVLLLDELLQKGYGLGSGISLFIATNLCENVIWKAFSPTTLNTGKGTEFEGAIIALFHLMFTRNDKLLAL 229
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BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Match: A0A078AGI9_STYLE (Protein transport protein sec61 alpha subunit n=3 Tax=Sporadotrichida TaxID=693921 RepID=A0A078AGI9_STYLE)

HSP 1 Score: 283 bits (724), Expect = 1.360e-90
Identity = 140/225 (62.22%), Postives = 176/225 (78.22%), Query Frame = 1 
Query:    1 DFLEPVKDLIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGV-RPTSGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSKRDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLVVAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQGAEFHGAIIALFHLLMTRSDKLGAL 672
            D + PV  L+P + +P  +    DK+ WT++TL  +L+CCQIPLYG+ R    DP YW+RVI+ASNKGTLMELGISPIITSGMI+QLL G +++EV+Q SK DR+L  AA K+F L+ITLGEA  Y LSG +G +S++GA  A+LII QL +AGIIV+LLDELLQKGYG+G+GISLFIAT+ CE I+W +FSP TI   QG EF GAIIALFH L+T+S+KL AL
Sbjct:    9 DLVRPVMGLLPEVEQPLKKQQFNDKLIWTSITLFIYLICCQIPLYGIARQEGADPLYWLRVILASNKGTLMELGISPIITSGMIMQLLAGAKIIEVNQSSKEDRDLFQAAQKLFGLIITLGEAFAYLLSGMYGELSDLGAFNAILIILQLFIAGIIVILLDELLQKGYGLGSGISLFIATNICENILWKSFSPITIRTEQGTEFEGAIIALFHFLLTKSNKLYAL 233
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BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Match: A0A0S7G7D6_9TELE (Protein transport protein SEC61 subunit alpha (Fragment) n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A0S7G7D6_9TELE)

HSP 1 Score: 276 bits (707), Expect = 1.420e-90
Identity = 140/227 (61.67%), Postives = 178/227 (78.41%), Query Frame = 1 
Query:    4 FLEPVKD---LIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGVRPT-SGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSKRDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLVVAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQGAEFHGAIIALFHLLMTRSDKLGAL 672
            FLE +K    ++P I KP  ++   +K+ WTA+TL  FLVCCQIPL+G+  + S DPFYWMRVIMASN+GTLMELGISPI+TSG+I+QLL G +++EV    K DR L + A K+F ++IT+G+A VY ++G +G  SE+GA   LLII QL VAG+IV+LLDELLQKGYG+G+GISLFIAT+ CE IVW AFSPTT+N G+G EF GA+IALFHLL TR+DK+ AL
Sbjct:    5 FLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAVIALFHLLATRTDKVRAL 230
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BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Match: A0A7S0DAN2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DAN2_9EUKA)

HSP 1 Score: 278 bits (710), Expect = 2.010e-90
Identity = 132/225 (58.67%), Postives = 176/225 (78.22%), Query Frame = 1 
Query:    1 DFLEPVKDLIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGVRP-TSGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSKRDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLVVAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQGAEFHGAIIALFHLLMTRSDKLGAL 672
            + ++PV  ++P +  P   +   +++ WT +TLL FLVCCQIPLYG+R  +S DPFYWMRVI+ASN+GTLMELGISPI+TSGM++QLL G ++++VDQ  K DR L   A K+  L+IT+GEA  Y +SG +G V E+GA+ ++LII QL  AG+IV++LDELL KGYG+G+GISLFIAT+ CE I+W AFSPTT N G+G EF GAIIA+FH+L+TR+DK+ AL
Sbjct:    5 NIIKPVMCILPEVRAPERNVQFKERMMWTIITLLIFLVCCQIPLYGIRSNSSADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSKIIQVDQSVKEDRALFQGAQKLCGLLITIGEALAYVMSGMYGDVKELGAINSILIILQLFFAGVIVLVLDELLTKGYGLGSGISLFIATNICENIIWKAFSPTTYNTGRGTEFEGAIIAMFHMLITRTDKVRAL 229
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BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Match: A0A7S1D8Y6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8Y6_CYCTE)

HSP 1 Score: 279 bits (713), Expect = 2.050e-90
Identity = 137/224 (61.16%), Postives = 172/224 (76.79%), Query Frame = 1 
Query:    4 FLEPVKDLIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGVRPT-SGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSKRDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLVVAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQGAEFHGAIIALFHLLMTRSDKLGAL 672
             + PV  ++P +  P  ++   +K+ WT +TL  FLVCCQIP+YGV+   S DPFYWMRVI+ASN+GTLMELGISPI+TSG+++QLL G R++EVD   K DR L   A K+F ++IT+GEA  Y +SG +G +  IGA  A+LIIAQL  AG+IV+ LDELLQKGYG+G+GISLFIAT+ CE IVW AFSPTTIN G+G EF GAIIALFHLL+TR DK+ AL
Sbjct:   12 LIRPVMCVLPEVASPDRKIPFREKLLWTTITLFIFLVCCQIPIYGVQSAKSSDPFYWMRVILASNRGTLMELGISPIVTSGLVMQLLAGSRIIEVDYNVKEDRALFSGAQKLFGILITVGEAIAYVVSGMYGDLGSIGAGNAILIIAQLFCAGLIVLTLDELLQKGYGLGSGISLFIATNICENIVWKAFSPTTINTGRGTEFEGAIIALFHLLITRKDKVRAL 235
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BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Match: A0A2A2LEJ7_9BILA (Plug_translocon domain-containing protein n=2 Tax=Chromadorea TaxID=119089 RepID=A0A2A2LEJ7_9BILA)

HSP 1 Score: 278 bits (711), Expect = 3.120e-90
Identity = 138/225 (61.33%), Postives = 177/225 (78.67%), Query Frame = 1 
Query:    1 DFLEPVKDLIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGVRPT-SGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSKRDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLVVAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQGAEFHGAIIALFHLLMTRSDKLGAL 672
            +F++P    +P + KP  ++   +K+ WTA+TL  FLVCCQIPL+G+  T S DPFYW+RVI+ASN+GTLMELGISPI+TSG+I+QLL G +++EV    K DR L + A K+F ++IT+G+A VY LSG +G  +EIGA   LLI+ QLVVAG+IV+LLDELLQKGYG+G+GISLFIAT+ CE IVW AFSP T+N G+G EF GA+IALFHLL TRSDK+ AL
Sbjct:    7 EFVKPFCGFVPEVSKPERKIQFREKMLWTAITLFVFLVCCQIPLFGIMSTDSADPFYWLRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMIITVGQAIVYVLSGLYGDPAEIGAGICLLIVVQLVVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATMNTGRGTEFEGAVIALFHLLATRSDKVRAL 230
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BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Match: A0A0S7G6Y6_9TELE (Protein transport protein SEC61 subunit alpha n=3 Tax=Bilateria TaxID=33213 RepID=A0A0S7G6Y6_9TELE)

HSP 1 Score: 276 bits (705), Expect = 4.380e-90
Identity = 140/227 (61.67%), Postives = 178/227 (78.41%), Query Frame = 1 
Query:    4 FLEPVKD---LIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGVRPT-SGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSKRDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLVVAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQGAEFHGAIIALFHLLMTRSDKLGAL 672
            FLE +K    ++P I KP  ++   +K+ WTA+TL  FLVCCQIPL+G+  + S DPFYWMRVI+ASN+GTLMELGISPI+TSG+I+QLL G +++EV    K DR L + A K+F ++IT+G+A VY ++G +G  SE+GA   LLII QL VAG+IV+LLDELLQKGYG+G+GISLFIAT+ CE IVW AFSPTT+N G+G EF GAIIALFHLL TR+DK+ AL
Sbjct:    5 FLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRAL 230
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BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Match: A0A2R5GG73_9STRA (Protein transport protein Sec61 subunit alpha n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GG73_9STRA)

HSP 1 Score: 281 bits (720), Expect = 5.590e-90
Identity = 141/224 (62.95%), Postives = 176/224 (78.57%), Query Frame = 1 
Query:    4 FLEPVKDLIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGVR-PTSGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSKRDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLVVAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQGAEFHGAIIALFHLLMTRSDKLGAL 672
             ++P+  +IP + +P  ++   +K+ WTA+TL  FLVCCQIPLYGV     GDP YW+RVI+ASN+GTLMELGISPI+TSGMI+QLL GVR++EVDQ  K DR L   A K+F ++IT+GEA  Y LSG +G VS+IGA  A+LII QLV+AGIIV++LDELLQKGYG+G+GISLFIAT+ CE IVW AFSPTTIN G G EF GA+IAL HL++TR +K  AL
Sbjct:    7 IIKPMMFIIPEVEQPDRKVPFREKMLWTAITLFIFLVCCQIPLYGVSLGKGGDPLYWVRVILASNRGTLMELGISPIVTSGMIMQLLAGVRIIEVDQSVKEDRALFGGAQKLFGILITIGEAVAYVLSGAYGDVSDIGAGNAILIIMQLVMAGIIVIILDELLQKGYGLGSGISLFIATNICESIVWKAFSPTTINTGAGTEFEGAVIALGHLVLTRPNKFQAL 230
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88043.20456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812NLM5_SYMPI6.260e-9263.13Sec61a protein n=1 Tax=Symbiodinium pilosum TaxID=... [more]
H3G9A5_PHYRM2.330e-9161.16Plug_translocon domain-containing protein n=30 Tax... [more]
A0A7J6LHU1_PEROL5.900e-9162.67Protein transport protein Sec61 subunit alpha n=5 ... [more]
A0A078AGI9_STYLE1.360e-9062.22Protein transport protein sec61 alpha subunit n=3 ... [more]
A0A0S7G7D6_9TELE1.420e-9061.67Protein transport protein SEC61 subunit alpha (Fra... [more]
A0A7S0DAN2_9EUKA2.010e-9058.67Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S1D8Y6_CYCTE2.050e-9061.16Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A2A2LEJ7_9BILA3.120e-9061.33Plug_translocon domain-containing protein n=2 Tax=... [more]
A0A0S7G6Y6_9TELE4.380e-9061.67Protein transport protein SEC61 subunit alpha n=3 ... [more]
A0A2R5GG73_9STRA5.590e-9062.95Protein transport protein Sec61 subunit alpha n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88043contigM-pyrifera_M_contig88043:8..679 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score288.5
Seed ortholog evalue2.7e-75
Seed eggNOG ortholog325452.fgenesh_scip_prom.46568.5170
Preferred nameSEC61A1
KEGG koko:K10956
KEGG TC3.A.5.4,3.A.5.8,3.A.5.9
KEGG Pathwayko03060,ko04141,ko04145,ko05110,map03060,map04141,map04145,map05110
KEGG ModuleM00401
Hectar predicted targeting categorysignal anchor
GOsGO:0000322,GO:0000323,GO:0000324,GO:0001655,GO:0001700,GO:0001822,GO:0002009,GO:0002376,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005783,GO:0005784,GO:0005789,GO:0005791,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006952,GO:0006955,GO:0006996,GO:0007029,GO:0007275,GO:0007391,GO:0007399,GO:0007417,GO:0007420,GO:0008104,GO:0008150,GO:0008152,GO:0008258,GO:0008320,GO:0008565,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0010506,GO:0010507,GO:0010941,GO:0010942,GO:0010959,GO:0012505,GO:0012506,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016331,GO:0017038,GO:0019222,GO:0019538,GO:0019941,GO:0021536,GO:0021538,GO:0021986,GO:0022804,GO:0022857,GO:0022884,GO:0030139,GO:0030163,GO:0030176,GO:0030433,GO:0030659,GO:0030666,GO:0030670,GO:0030867,GO:0030900,GO:0030970,GO:0031090,GO:0031204,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032527,GO:0032879,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0033554,GO:0034097,GO:0034341,GO:0034613,GO:0034756,GO:0034758,GO:0034759,GO:0034761,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0034976,GO:0036503,GO:0039019,GO:0042175,GO:0042221,GO:0042277,GO:0042335,GO:0042886,GO:0042887,GO:0043021,GO:0043022,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0043632,GO:0043900,GO:0043902,GO:0043903,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0044877,GO:0045047,GO:0045087,GO:0045169,GO:0045184,GO:0045335,GO:0046596,GO:0046598,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048598,GO:0048729,GO:0048731,GO:0048793,GO:0048856,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0051716,GO:0055085,GO:0060322,GO:0060429,GO:0065002,GO:0065007,GO:0070727,GO:0070843,GO:0070972,GO:0071256,GO:0071261,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072001,GO:0072006,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097708,GO:0098586,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903513,GO:1903900,GO:1903902,GO:1904062,GO:1904064,GO:1904680
EggNOG free text desc.Plug domain of Sec61p
EggNOG OGs3Q7NX@4776,COG0201@1,KOG1373@2759
COG Functional cat.U
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044
Exons1
Model size672
Cds size672
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816790.152937-CDS-M-pyrifera_M_contig88043:7..6791622816790.152937-CDS-M-pyrifera_M_contig88043:7..679Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88043 8..679 -
1692278179.8795102-CDS-M-pyrifera_M_contig88043:7..6791692278179.8795102-CDS-M-pyrifera_M_contig88043:7..679Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88043 8..679 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88043.20456.1prot_M-pyrifera_M_contig88043.20456.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88043 8..679 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88043.20456.1

>prot_M-pyrifera_M_contig88043.20456.1 ID=prot_M-pyrifera_M_contig88043.20456.1|Name=mRNA_M-pyrifera_M_contig88043.20456.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp
DFLEPVKDLIPRIPKPATELGAMDKIWWTAMTLLCFLVCCQIPLYGVRPT
SGDPFYWMRVIMASNKGTLMELGISPIITSGMIIQLLEGVRLVEVDQKSK
RDRELSDAASKIFALVITLGEAAVYTLSGQFGPVSEIGAVTALLIIAQLV
VAGIIVMLLDELLQKGYGVGAGISLFIATSTCEQIVWDAFSPTTINVGQG
AEFHGAIIALFHLLMTRSDKLGAL
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mRNA from alignment at M-pyrifera_M_contig88043:8..679-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88043.20456.1 ID=mRNA_M-pyrifera_M_contig88043.20456.1|Name=mRNA_M-pyrifera_M_contig88043.20456.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig88043:8..679- (Macrocystis pyrifera P11B4 male)
GACTTTCTGGAGCCGGTGAAGGACCTGATTCCTCGGATCCCCAAGCCCGC
GACGGAGCTGGGAGCGATGGACAAGATTTGGTGGACCGCGATGACGCTGC
TGTGCTTCCTGGTGTGCTGCCAGATCCCGCTGTACGGCGTGCGGCCGACG
AGCGGAGACCCTTTCTACTGGATGCGCGTGATCATGGCGTCGAATAAGGG
CACTTTGATGGAGTTGGGCATTTCGCCCATCATCACCTCGGGCATGATCA
TCCAGTTGTTGGAGGGCGTGCGCCTGGTGGAGGTGGACCAGAAGAGCAAG
CGCGACCGGGAGTTGAGTGACGCCGCATCCAAGATCTTTGCCCTCGTCAT
CACCTTGGGCGAGGCAGCAGTCTACACCTTGTCTGGCCAATTCGGTCCCG
TGAGCGAAATTGGTGCTGTCACTGCTCTCCTCATCATCGCGCAGCTTGTG
GTGGCTGGCATCATCGTGATGCTGCTCGACGAGCTGCTGCAAAAAGGCTA
CGGCGTCGGCGCTGGCATTTCCCTCTTCATTGCCACCAGCACGTGTGAGC
AAATCGTGTGGGATGCCTTCTCCCCCACCACCATCAACGTGGGCCAAGGA
GCAGAGTTCCACGGTGCAATCATCGCTCTTTTCCACTTGCTCATGACTCG
TTCCGACAAATTGGGCGCTTTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88043:8..679-

>mRNA_M-pyrifera_M_contig88043.20456.1 ID=mRNA_M-pyrifera_M_contig88043.20456.1|Name=mRNA_M-pyrifera_M_contig88043.20456.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1344bp|location=Sequence derived from alignment at M-pyrifera_M_contig88043:8..679- (Macrocystis pyrifera P11B4 male)
GACTTTCTGGAGCCGGTGAAGGACCTGATTCCTCGGATCCCCAAGCCCGC
GACGGAGCTGGGAGCGATGGACAAGATTTGGTGGACCGCGATGACGCTGC
TGTGCTTCCTGGTGTGCTGCCAGATCCCGCTGTACGGCGTGCGGCCGACG
AGCGGAGACCCTTTCTACTGGATGCGCGTGATCATGGCGTCGAATAAGGG
CACTTTGATGGAGTTGGGCATTTCGCCCATCATCACCTCGGGCATGATCA
TCCAGTTGTTGGAGGGCGTGCGCCTGGTGGAGGTGGACCAGAAGAGCAAG
CGCGACCGGGAGTTGAGTGACGCCGCATCCAAGATCTTTGCCCTCGTCAT
CACCTTGGGCGAGGCAGCAGTCTACACCTTGTCTGGCCAATTCGGTCCCG
TGAGCGAAATTGGTGCTGTCACTGCTCTCCTCATCATCGCGCAGCTTGTG
GTGGCTGGCATCATCGTGATGCTGCTCGACGAGCTGCTGCAAAAAGGCTA
CGGCGTCGGCGCTGGCATTTCCCTCTTCATTGCCACCAGCACGTGTGAGC
AAATCGTGTGGGATGCCTTCTCCCCCACCACCATCAACGTGGGCCAAGGA
GCAGAGTTCCACGGTGCAATCATCGCTCTTTTCCACTTGCTCATGACTCG
TTCCGACAAATTGGGCGCTTTGGACTTTCTGGAGCCGGTGAAGGACCTGA
TTCCTCGGATCCCCAAGCCCGCGACGGAGCTGGGAGCGATGGACAAGATT
TGGTGGACCGCGATGACGCTGCTGTGCTTCCTGGTGTGCTGCCAGATCCC
GCTGTACGGCGTGCGGCCGACGAGCGGAGACCCTTTCTACTGGATGCGCG
TGATCATGGCGTCGAATAAGGGCACTTTGATGGAGTTGGGCATTTCGCCC
ATCATCACCTCGGGCATGATCATCCAGTTGTTGGAGGGCGTGCGCCTGGT
GGAGGTGGACCAGAAGAGCAAGCGCGACCGGGAGTTGAGTGACGCCGCAT
CCAAGATCTTTGCCCTCGTCATCACCTTGGGCGAGGCAGCAGTCTACACC
TTGTCTGGCCAATTCGGTCCCGTGAGCGAAATTGGTGCTGTCACTGCTCT
CCTCATCATCGCGCAGCTTGTGGTGGCTGGCATCATCGTGATGCTGCTCG
ACGAGCTGCTGCAAAAAGGCTACGGCGTCGGCGCTGGCATTTCCCTCTTC
ATTGCCACCAGCACGTGTGAGCAAATCGTGTGGGATGCCTTCTCCCCCAC
CACCATCAACGTGGGCCAAGGAGCAGAGTTCCACGGTGCAATCATCGCTC
TTTTCCACTTGCTCATGACTCGTTCCGACAAATTGGGCGCTTTG
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