mRNA_M-pyrifera_M_contig87360.20298.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87360.20298.1
Unique NamemRNA_M-pyrifera_M_contig87360.20298.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Match: A0A7X3XSS0_9BACT (GNAT family N-acetyltransferase n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X3XSS0_9BACT)

HSP 1 Score: 182 bits (462), Expect = 4.160e-55
Identity = 87/161 (54.04%), Postives = 113/161 (70.19%), Query Frame = 1
Query:    4 AKLHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIV--FDAAIPIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEAFAK-GYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWFSMLDGEWAA 477
            A+L++ +HG  ++EQ+WTYM YGPF+   + Q+WL E   S+DPLF  V   ++   +G+V+F+ I P+ R +ELGHIW+ P AQ   +   V   ML EAF +  YRRVEWKCD+LN RSR AAL LGF  EGIFRQH ++KGRNRDT W+SMLD EW A
Sbjct:   43 AELYACSHGSHIKEQIWTYMSYGPFDHNYSMQSWLEEGTASSDPLFFTVHHLESKQRVGMVSFLNIVPDMRRLELGHIWYSPNAQRSNVNTEVIYLMLCEAFDRLKYRRVEWKCDSLNERSRAAALRLGFKFEGIFRQHMIIKGRNRDTAWYSMLDSEWTA 203          
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Match: UPI00082B85F0 (GNAT family N-acetyltransferase n=1 Tax=Halofilum ochraceum TaxID=1611323 RepID=UPI00082B85F0)

HSP 1 Score: 181 bits (458), Expect = 1.360e-54
Identity = 88/157 (56.05%), Postives = 107/157 (68.15%), Query Frame = 1
Query:   10 LHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIVFDAAI--PIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEAFAK-GYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWFSMLDGEW 471
            L+SA+HGD   E +W +MPYGPF    A  AWL   A STDP F  V D A   P+G+V+++ I P  R +ELGHIW+ P  Q       V R +L EAF + G RRVEWKCDALNARSR AAL LGF  EG+FRQH +VKGRNRDT WF+++DG+W
Sbjct:   28 LYSASHGDPETEALWAWMPYGPFADRDAMGAWLETCAASTDPAFRAVVDHASGRPVGMVSYLNIEPPHRRLELGHIWYAPSVQRTRTNTEVIRLLLGEAFDRLGCRRVEWKCDALNARSRAAALRLGFRFEGVFRQHMIVKGRNRDTAWFALMDGDW 184          
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Match: A0A7X3T5A6_9BACT (GNAT family N-acetyltransferase n=3 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X3T5A6_9BACT)

HSP 1 Score: 179 bits (454), Expect = 6.370e-54
Identity = 88/161 (54.66%), Postives = 110/161 (68.32%), Query Frame = 1
Query:    4 AKLHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIV--FDAAIPIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEAFAK-GYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWFSMLDGEWAA 477
            A+L+  +HG  ++EQ+WTYM YGPF++    Q WL E A S DPLF  V   ++   +G+V+F+ I  + R +ELGHIW+ P +Q   +       ML EAF K  YRRVEWKCD+LN RSR AAL LGF  EGIFRQH +VKGRNRDT W+SMLD EWAA
Sbjct:   43 AELYECSHGSDIKEQIWTYMSYGPFDNTYNMQMWLEEGAESEDPLFFTVHHLESKQRVGMVSFLNIVSDMRRLELGHIWYSPESQRSNVNTEAIYLMLCEAFDKLQYRRVEWKCDSLNERSRAAALRLGFKFEGIFRQHIIVKGRNRDTAWYSMLDSEWAA 203          
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Match: A0A7X4FC23_9BACT (GNAT family N-acetyltransferase n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X4FC23_9BACT)

HSP 1 Score: 177 bits (450), Expect = 2.570e-53
Identity = 86/161 (53.42%), Postives = 110/161 (68.32%), Query Frame = 1
Query:    4 AKLHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIV--FDAAIPIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEAFAK-GYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWFSMLDGEWAA 477
            A+L+  +HG  ++EQ+WTYM YGPF+   + Q WL + A S DPLF  V   ++   +G+V+F+ I  + R +ELGHIW+ P +Q   +       ML EAF +  YRRVEWKCD+LN RSR AAL LGF  EGIFRQH +VKGRNRDT W+SMLD EWAA
Sbjct:   43 AELYGCSHGSDVKEQIWTYMSYGPFDDEHSMQTWLEDGAESQDPLFFTVHHLESKQRVGMVSFLNIVSDMRRLELGHIWYSPDSQRSNVNTEAMYLMLREAFDRLKYRRVEWKCDSLNERSRAAALRLGFKFEGIFRQHIIVKGRNRDTAWYSMLDSEWAA 203          
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Match: A0A496ABM4_9BACT (GNAT family N-acetyltransferase n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A496ABM4_9BACT)

HSP 1 Score: 177 bits (448), Expect = 1.020e-52
Identity = 86/160 (53.75%), Postives = 108/160 (67.50%), Query Frame = 1
Query:    7 KLHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIV--FDAAIPIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEAFAK-GYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWFSMLDGEWAA 477
            +L+  +HG  ++ Q+WTYM YGPF+   +   WL E+A S DPLF  V   ++   +G+V+F+ I  + R +ELGHIW+ P +Q   +       ML EAF K  YRRVEWKCDALN RSR AAL LGF  EGIFRQH +VKGRNRDT W+SMLD EWAA
Sbjct:   67 ELYKCSHGSDIKAQIWTYMSYGPFDDEHSMHKWLEEKAKSEDPLFFTVHHLESKQHVGMVSFLNIVSDMRRLELGHIWYSPDSQRSNVNTEAIYLMLCEAFDKLQYRRVEWKCDALNKRSRAAALRLGFKFEGIFRQHIIVKGRNRDTAWYSMLDSEWAA 226          
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Match: A0A7X4FKP7_9BACT (GNAT family N-acetyltransferase n=4 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4FKP7_9BACT)

HSP 1 Score: 175 bits (443), Expect = 3.520e-52
Identity = 90/160 (56.25%), Postives = 104/160 (65.00%), Query Frame = 1
Query:    1 AAKLHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIVFDAAI--PIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEAF-AKGYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWFSMLDGEW 471
            A  L + +HG    EQ+WTYM YGPFE  +  Q WL E   S DPLF  V D     P+G+V+F+ I P+ R +ELG+IW+ P AQ           ML EAF   GYRRVEWKCDALN RSR AAL LGFT EG+FRQH +VK RNRDT WFSMLD EW
Sbjct:   45 APGLFACSHGTEPVEQLWTYMAYGPFEDVSDMQEWLEEIEDSGDPLFLSVRDRVSDRPVGMVSFLNIAPDARRLELGNIWYGPEAQNTCANTEAAYLMLCEAFDCMGYRRVEWKCDALNERSRSAALRLGFTYEGLFRQHMIVKDRNRDTTWFSMLDTEW 204          
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Match: A0A495Z295_9BACT (GNAT family N-acetyltransferase n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A495Z295_9BACT)

HSP 1 Score: 174 bits (442), Expect = 4.170e-52
Identity = 85/161 (52.80%), Postives = 108/161 (67.08%), Query Frame = 1
Query:    4 AKLHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIV--FDAAIPIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEAFAK-GYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWFSMLDGEWAA 477
            A+L+  +HG  ++EQ+WTYM YGPF S      WL E A S DPLF  V   ++   +G+V+F+ I  + R +ELGHIW+ P +Q   +       ML EAF +  YRRVEWKCDALN +SR AAL LGF  EGIFRQH ++KG+NRDT W+SMLD EWAA
Sbjct:   43 AELYRCSHGSDVKEQIWTYMSYGPFNSTHDMHKWLGEGAESEDPLFFTVHHLESKQRVGMVSFLNIVSDMRRLELGHIWYSPDSQRSNVNTEAIYLMLCEAFDRLKYRRVEWKCDALNEKSRAAALRLGFKFEGIFRQHMIIKGQNRDTAWYSMLDSEWAA 203          
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Match: A0A7X3RE04_9BACT (GNAT family N-acetyltransferase n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X3RE04_9BACT)

HSP 1 Score: 174 bits (441), Expect = 5.910e-52
Identity = 86/161 (53.42%), Postives = 110/161 (68.32%), Query Frame = 1
Query:    4 AKLHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIV--FDAAIPIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEAFAK-GYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWFSMLDGEWAA 477
            A+L+  +HG +++EQ+WTYM YGPF+S  +   WL E A S  PLF  V   ++   IG+V+F+ I  + R +ELGHIW+ P +Q   +       ML EAF +  YRRVEWKCD+LN +SR AAL LGF  EGIFRQH +VKGRNRDT W+SMLD EWAA
Sbjct:   43 AELYECSHGSNMKEQIWTYMSYGPFDSTHSRHKWLEEGAASQYPLFFTVHHLESKQRIGMVSFLNIVSDMRRLELGHIWYSPNSQRSNVNTEAIYLMLCEAFDRLKYRRVEWKCDSLNEKSRAAALRLGFQFEGIFRQHIIVKGRNRDTAWYSMLDSEWAA 203          
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Match: A0A1Q7FIP6_9CHLR (GNAT family N-acetyltransferase n=2 Tax=Terrabacteria group TaxID=1783272 RepID=A0A1Q7FIP6_9CHLR)

HSP 1 Score: 174 bits (441), Expect = 6.270e-52
Identity = 88/160 (55.00%), Postives = 103/160 (64.38%), Query Frame = 1
Query:    1 AAKLHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIVFDAAI--PIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEAFAK-GYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWFSMLDGEW 471
            A  L +A+H D   E ++ Y+PYGPF     F+ WL +RA S DPLF  V DAA   P G+ AFM + PE  V+E+GHIWF P  Q    A      M   AF + GYRR+EWKCDALN  SRRAA   GFT EG+FRQH VVKG NRDT WFS+LDGEW
Sbjct:   37 ARPLFAASHQDGAGELLFRYLPYGPFAGIGDFKTWLEQRAASADPLFFCVTDAATGSPQGMAAFMRMAPEHGVIEIGHIWFSPSLQRTRQATEAIYLMARHAFDELGYRRLEWKCDALNESSRRAAERFGFTFEGVFRQHLVVKGHNRDTAWFSILDGEW 196          
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Match: A0A496BAQ6_9BACT (GNAT family N-acetyltransferase n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A496BAQ6_9BACT)

HSP 1 Score: 173 bits (439), Expect = 1.380e-51
Identity = 82/160 (51.25%), Postives = 110/160 (68.75%), Query Frame = 1
Query:    4 AKLHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIV--FDAAIPIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEAFAK-GYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWFSMLDGEWA 474
            A+L+  +HG  ++EQ+WTYM YGPF++  + Q WL E + S DPLF  V   ++  P+G+V+F+ I  + R +ELGHIW+   +Q   +       ML EAF +  YRRVEWKCD+LN +SR AAL LGF  EG+FRQH +VKGRNRDT W+S+LD EWA
Sbjct:   50 AELYDCSHGSDVKEQIWTYMSYGPFDNEHSMQTWLEEGSESKDPLFFTVHHLESKQPVGMVSFLNIVSDMRRLELGHIWYSSDSQRSNVNTEAIYLMLCEAFDRLKYRRVEWKCDSLNEKSRSAALRLGFKFEGLFRQHIIVKGRNRDTAWYSILDSEWA 209          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87360.20298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X3XSS0_9BACT4.160e-5554.04GNAT family N-acetyltransferase n=1 Tax=Candidatus... [more]
UPI00082B85F01.360e-5456.05GNAT family N-acetyltransferase n=1 Tax=Halofilum ... [more]
A0A7X3T5A6_9BACT6.370e-5454.66GNAT family N-acetyltransferase n=3 Tax=Candidatus... [more]
A0A7X4FC23_9BACT2.570e-5353.42GNAT family N-acetyltransferase n=1 Tax=Candidatus... [more]
A0A496ABM4_9BACT1.020e-5253.75GNAT family N-acetyltransferase n=1 Tax=Candidatus... [more]
A0A7X4FKP7_9BACT3.520e-5256.25GNAT family N-acetyltransferase n=4 Tax=Gemmatimon... [more]
A0A495Z295_9BACT4.170e-5252.80GNAT family N-acetyltransferase n=1 Tax=Candidatus... [more]
A0A7X3RE04_9BACT5.910e-5253.42GNAT family N-acetyltransferase n=1 Tax=Candidatus... [more]
A0A1Q7FIP6_9CHLR6.270e-5255.00GNAT family N-acetyltransferase n=2 Tax=Terrabacte... [more]
A0A496BAQ6_9BACT1.380e-5151.25GNAT family N-acetyltransferase n=1 Tax=Candidatus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87360contigM-pyrifera_M_contig87360:327..821 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score167.5
Seed ortholog evalue5.1e-39
Seed eggNOG ortholog1403819.BATR01000114_gene3943
Preferred nameydaF_1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Acetyltransferase (GNAT) domain
EggNOG OGs46W3N@74201,COG1670@1,COG1670@2
COG Functional cat.J
Best tax levelVerrucomicrobia
Best eggNOG OGNA|NA|NA
Exons1
Model size495
Cds size495
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816782.5081499-CDS-M-pyrifera_M_contig87360:326..8211622816782.5081499-CDS-M-pyrifera_M_contig87360:326..821Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87360 327..821 -
1692278175.4892948-CDS-M-pyrifera_M_contig87360:326..8211692278175.4892948-CDS-M-pyrifera_M_contig87360:326..821Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87360 327..821 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87360.20298.1prot_M-pyrifera_M_contig87360.20298.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87360 327..821 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87360.20298.1

>prot_M-pyrifera_M_contig87360.20298.1 ID=prot_M-pyrifera_M_contig87360.20298.1|Name=mRNA_M-pyrifera_M_contig87360.20298.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp
AAKLHSATHGDSLREQVWTYMPYGPFESAAAFQAWLAERAPSTDPLFHIV
FDAAIPIGLVAFMAIRPEGRVVELGHIWFVPGAQAQGLAGVVGRWMLAEA
FAKGYRRVEWKCDALNARSRRAALALGFTEEGIFRQHFVVKGRNRDTVWF
SMLDGEWAARSSER*
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mRNA from alignment at M-pyrifera_M_contig87360:327..821-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87360.20298.1 ID=mRNA_M-pyrifera_M_contig87360.20298.1|Name=mRNA_M-pyrifera_M_contig87360.20298.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig87360:327..821- (Macrocystis pyrifera P11B4 male)
GCCGCCAAGCTCCACTCCGCGACCCACGGCGACTCGCTGCGCGAACAGGT CTGGACCTACATGCCTTACGGCCCGTTCGAGAGCGCGGCCGCGTTCCAGG CGTGGCTCGCCGAGCGCGCACCGTCGACCGACCCGCTCTTCCACATCGTC TTCGACGCCGCGATCCCGATCGGCCTGGTCGCCTTCATGGCGATCCGCCC CGAGGGCCGCGTCGTCGAGCTCGGCCACATCTGGTTCGTGCCTGGCGCCC AGGCCCAGGGCCTCGCGGGCGTCGTCGGCCGCTGGATGCTGGCCGAGGCG TTCGCCAAGGGCTATCGGCGCGTCGAGTGGAAGTGCGATGCCCTGAACGC GCGCTCACGCCGCGCGGCACTGGCGCTGGGCTTCACCGAGGAAGGCATCT TCCGCCAGCACTTCGTCGTCAAGGGCCGCAACCGCGACACGGTGTGGTTC TCGATGCTCGACGGCGAGTGGGCCGCGCGCTCGAGCGAACGATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87360:327..821-

>mRNA_M-pyrifera_M_contig87360.20298.1 ID=mRNA_M-pyrifera_M_contig87360.20298.1|Name=mRNA_M-pyrifera_M_contig87360.20298.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig87360:327..821- (Macrocystis pyrifera P11B4 male)
GCCGCCAAGCTCCACTCCGCGACCCACGGCGACTCGCTGCGCGAACAGGT
CTGGACCTACATGCCTTACGGCCCGTTCGAGAGCGCGGCCGCGTTCCAGG
CGTGGCTCGCCGAGCGCGCACCGTCGACCGACCCGCTCTTCCACATCGTC
TTCGACGCCGCGATCCCGATCGGCCTGGTCGCCTTCATGGCGATCCGCCC
CGAGGGCCGCGTCGTCGAGCTCGGCCACATCTGGTTCGTGCCTGGCGCCC
AGGCCCAGGGCCTCGCGGGCGTCGTCGGCCGCTGGATGCTGGCCGAGGCG
TTCGCCAAGGGCTATCGGCGCGTCGAGTGGAAGTGCGATGCCCTGAACGC
GCGCTCACGCCGCGCGGCACTGGCGCTGGGCTTCACCGAGGAAGGCATCT
TCCGCCAGCACTTCGTCGTCAAGGGCCGCAACCGCGACACGGTGTGGTTC
TCGATGCTCGACGGCGAGTGGGCCGCGCGCTCGAGCGAACGATGAGCCGC
CAAGCTCCACTCCGCGACCCACGGCGACTCGCTGCGCGAACAGGTCTGGA
CCTACATGCCTTACGGCCCGTTCGAGAGCGCGGCCGCGTTCCAGGCGTGG
CTCGCCGAGCGCGCACCGTCGACCGACCCGCTCTTCCACATCGTCTTCGA
CGCCGCGATCCCGATCGGCCTGGTCGCCTTCATGGCGATCCGCCCCGAGG
GCCGCGTCGTCGAGCTCGGCCACATCTGGTTCGTGCCTGGCGCCCAGGCC
CAGGGCCTCGCGGGCGTCGTCGGCCGCTGGATGCTGGCCGAGGCGTTCGC
CAAGGGCTATCGGCGCGTCGAGTGGAAGTGCGATGCCCTGAACGCGCGCT
CACGCCGCGCGGCACTGGCGCTGGGCTTCACCGAGGAAGGCATCTTCCGC
CAGCACTTCGTCGTCAAGGGCCGCAACCGCGACACGGTGTGGTTCTCGAT
GCTCGACGGCGAGTGGGCCGCGCGCTCGAGCGAACGATGA
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