mRNA_M-pyrifera_M_contig8706.20244.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8706.20244.1
Unique NamemRNA_M-pyrifera_M_contig8706.20244.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: D7FJU6_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU6_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 4.490e-127
Identity = 185/235 (78.72%), Postives = 208/235 (88.51%), Query Frame = 3
Query:    3 QLVAAGCTVIALSRKGVPENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVRCCLGGVENLGS-RSKDSGDAVVLRVRDIAQMVA 704
            +LVAAGC VIALSRKG P NGG W KSVKWVE NA+NQDLYRAELR++DTVVSCVGGFGKTDAYMGL+NGE NIKL EAAADAGVKQFVF+SVHDYKAPS VK+VGYFDGKRRAEK++GELFG KGVILKPAF+YG R VKLTGP G+ERT+N+PLQR+GGPLA++  TG+ K+IA SGLPLADVAWTQPLS   V KSAVRCCL G ++LG  R KDSGDAVVL+V+D+AQM A
Sbjct:   70 KLVAAGCNVIALSRKGAPANGGSWVKSVKWVEGNALNQDLYRAELRRSDTVVSCVGGFGKTDAYMGLVNGETNIKLAEAAADAGVKQFVFVSVHDYKAPSAVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKERTVNIPLQRVGGPLAKITSTGIGKRIAGSGLPLADVAWTQPLSTAEVAKSAVRCCLEGTDSLGGGRGKDSGDAVVLKVQDMAQMTA 304          
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A6H5L1C5_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C5_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 3.640e-125
Identity = 186/238 (78.15%), Postives = 208/238 (87.39%), Query Frame = 3
Query:    3 QLVAAGCTVIALSRKGVPENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAE---SGLPLADVAWTQPLSVEAVGKSAVRCCLGGVENLGS-RSKDSGDAVVLRVRDIAQMVA 704
            QLVAAGC VIALSRKG P NGG W KSVKWVE NA+NQDLYRAELR++DTVVSCVGGFGKTDAYMGL+NGE NIKL EAAADAGVKQFVF+SVHDYKAPS VK+VGYFDGKRRAEK++GELFG KGVILKPAF+YG R VKLTGP G+ERT+N+PLQR+GGPLA++  TG+ K+IA    SGLPLADVAWTQPLS   V KSAVRCCL G ++LG  R KDSGDAVVL+V+D+AQM A
Sbjct:  124 QLVAAGCNVIALSRKGAPANGGSWVKSVKWVEGNALNQDLYRAELRRSDTVVSCVGGFGKTDAYMGLVNGETNIKLAEAAADAGVKQFVFVSVHDYKAPSVVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKERTVNIPLQRVGGPLAKITSTGIGKRIASESRSGLPLADVAWTQPLSTAEVAKSAVRCCLEGTDSLGGGRGKDSGDAVVLKVQDMAQMTA 361          
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A835ZDA8_9STRA (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA8_9STRA)

HSP 1 Score: 208 bits (529), Expect = 1.490e-59
Identity = 109/237 (45.99%), Postives = 152/237 (64.14%), Query Frame = 3
Query:    3 QLVAAGCTVIALSRKGV--PENGGVWTKSVK-WVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRER-TLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVRCCLG-GVENLGSRSKDSGDAVVLRVRDIAQM 698
            +L+  G  V+ LSR G   P     W   V+ W+ A+A++ D Y++ L   D+VVSC+GGFG TD+Y+ L+NG+  IKL EAA +AGV +FVF+SVH+YK P+ V R GYF GKRRAE  +GEL+G  G +L+PAF+YG++ V  T P   E+ T+ +PL+++G P A++      K++A SGLPLAD  +TQPLSV+ V  +A RC  G     +  R      A VL V DI +M
Sbjct:   75 ELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLANSGLPLADTVYTQPLSVDEVAFAASRCAAGTATAGVTVRLPSETGANVLTVDDIKRM 311          
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A061SCL0_9CHLO (Nad-binding protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SCL0_9CHLO)

HSP 1 Score: 135 bits (341), Expect = 1.250e-32
Identity = 80/202 (39.60%), Postives = 114/202 (56.44%), Query Frame = 3
Query:    3 QLVAAGCTVIALSRKGVPENGGV-WTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAV 605
            Q ++AG  V A++R G P +    W   V W+  NA+  D Y   L     V+ C+GGFG T+  M  +NGEAN++ +EAAA  G+ + VF+S HDYK PSFV   GYF GKR  E ++  L+ + GVIL+P F++G R V  T          +PL   G P+ ++     +K ++E  LPLA   +  P+SVE + K AV
Sbjct:   78 QAISAGLQVTAIARSGRPAHQTEDWCNEVTWISGNALEPDSYSEALEGAQGVICCIGGFG-TNEQMLQVNGEANMRALEAAAGRGIPRAVFISAHDYKFPSFVLS-GYFQGKRNVEDLMRSLYPESGVILRPGFIHGTRMVGSTP---------IPLGLFGQPIEKVLEFMPSKSLSE--LPLAGAGFVPPVSVEKLAKVAV 266          
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A7S0MZM9_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MZM9_9CHLO)

HSP 1 Score: 133 bits (334), Expect = 2.700e-31
Identity = 81/204 (39.71%), Postives = 113/204 (55.39%), Query Frame = 3
Query:   18 GCTVIALSRKGVPENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVK-RVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLAR---LAGTGVAKKIAES--GLPLADVAWTQPLSVEAVGKSAVRC 611
            G TV++++R G P     W   V WV A+  ++  +   L     V+SC+GGF  T A M  I G+A I  V AA  AGV +FVF+SVHDY  P F+K + GYF GK+RAE  V   F + G +L+P F+YG R V   G       + VPL  +G P+ +   LA       +AE+   LP +DV    P+SVE+V  +A++C
Sbjct:  111 GMTVVSINRSGPPSINEPWVDRVDWVNADVFDESSWSYTLPGAAAVISCIGGFATTAADMERICGDATIAGVGAAVAAGVPRFVFVSVHDYNIPDFLKDQSGYFSGKKRAEDAVLLQFPEGGAVLRPGFIYGSRLVPQLG-------VTVPLNLVGEPVQKILSLADQSPLGALAEALKPLPASDVLLAPPVSVESVAATALKC 307          
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A388KKI2_CHABU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KKI2_CHABU)

HSP 1 Score: 132 bits (332), Expect = 6.920e-30
Identity = 77/202 (38.12%), Postives = 112/202 (55.45%), Query Frame = 3
Query:    3 QLVAAGCTVIALSRKGVPENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVR 608
            + ++ G  V +++R G P     W K V+WV  +  + D++R +LR    VVSC+GGFG  D  M  ING AN+K V+AAA+  VK+FV +S H +  P+ + R GY++GKR AE+ V   F   G+IL+P F++G R+V           L VPL  +GGPL  +  +        S LP+       P+   AV K+AVR
Sbjct:  268 EALSRGIHVTSVNRSGPPARQEPWLKEVEWVRGDVFDPDVWRMQLRDASGVVSCIGGFGTNDE-MRRINGHANVKAVQAAAEEDVKRFVLISAHYFSVPAIILR-GYYEGKRIAEEAVRSKFPYGGIILRPGFIHGNRNVG---------NLTVPLSVIGGPLEAVMRSRAFTWT--SNLPIVGSVLLPPVKATAVAKAAVR 456          
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A388KGE5_CHABU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KGE5_CHABU)

HSP 1 Score: 132 bits (331), Expect = 9.670e-30
Identity = 86/218 (39.45%), Postives = 118/218 (54.13%), Query Frame = 3
Query:   18 GCTVIALSRKGVPENGG-----------------VWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAE-SGLPLADVAWTQPLSVEAVGKSAVRCCL 617
            G  V++LSR G    GG                  W   V W++ +    D +   L    TVVSC+GGFG  +  M  INGEAN++ V AA  AGV +F+++SVHDY  PSFV+ VGYF GK+RAEK V E F   GVIL+P F+YG+R V     NG    ++V L ++G P  +L   G+   I     LP +D+    P++VE V  +AV+  +
Sbjct:  253 GIEVVSLSRTGRSPYGGESGGGLDASSSLNPTESTWADQVTWIKGDVFAAD-WSTLLDGVTTVVSCIGGFGNNE-QMEKINGEANVQAVAAARQAGVGRFIYISVHDYNLPSFVRSVGYFSGKQRAEKAVLESFPATGVILRPGFIYGKRKV-----NG----VDVALDQVGQPFEKLL-EGIDNWIKPLKALPASDLLLLPPVNVEDVADAAVKAVI 458          
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A7S4LN96_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LN96_9EUGL)

HSP 1 Score: 126 bits (316), Expect = 2.740e-29
Identity = 81/214 (37.85%), Postives = 118/214 (55.14%), Query Frame = 3
Query:    9 VAAGCTVIALSRKG----VPENGGVWTKSVKWVEANAVNQDLYRAEL-RQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYK--APSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVRCCLGGVE 629
            V  G  V ALSR G      +    W K V W++ + +++D +RA L   T  V+S VG FG ++A+M  + G+ NI   E AA A V +FVF+S HDY+          GYF+GKRR E+ V EL+   G +L+P+FVYG R            T+ +PL  +G PL  L      K +A   LP+ D+ +T P+SVEAV ++A++  +G +E
Sbjct:   60 VERGLQVAALSRGGRLYSPAQADQPWAKEVTWLKGDVMDRDAWRAHLCSDTTAVISSVGAFG-SNAFMEQVCGDTNIAACEEAAAAHVPRFVFVSAHDYRLIGHGVGPLKGYFNGKRRVERRVRELYPSGGHVLQPSFVYGTR---------HHGTMKIPLGLVGAPLEALCALAPVKALAR--LPILDLPFTSPVSVEAVARTAIKGAVGELE 261          
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A5J4YUC1_PORPP (NAD(P)-bd_dom domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUC1_PORPP)

HSP 1 Score: 124 bits (312), Expect = 2.820e-28
Identity = 79/210 (37.62%), Postives = 119/210 (56.67%), Query Frame = 3
Query:   18 GCTVIALSRKGVP--ENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYK-APSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVRCCLGGVENLG 638
            G +V+ +SR G    +        V W+  +A+  + ++  L     VVSCVGGFG  +  M  I G+ N+ +  AA +AGV +FVF+S   Y   P+F++  GYF+GK+ AE+V GELFG    IL+PAFVYG R + +   N    +LNVPLQ +G PL     T  A+ +++ G P  ++A++ P SV+ + K AV    G ++  G
Sbjct:   87 GLSVLCISRSGASSAQLKDASLDGVAWLRGDALEPESWKYALSGASGVVSCVGGFGSNE-QMRRICGDTNVSVARAAHEAGVPRFVFVSARMYAFQPAFMR--GYFEGKKMAEQVAGELFGKDATILRPAFVYGARQISIPKVNV---SLNVPLQLIGKPLHAFNQTQAARAVSKLGGPF-ELAFSPPTSVDDLSKCAVLGATGYLQAQG 289          
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Match: A0A1D1ZIT8_9ARAE (Uncharacterized protein At1g32220, chloroplastic (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZIT8_9ARAE)

HSP 1 Score: 125 bits (313), Expect = 3.670e-28
Identity = 78/201 (38.81%), Postives = 110/201 (54.73%), Query Frame = 3
Query:    9 VAAGCTVIALSRKGVPENGGVWTKSVKWVEANAVNQDLYRAELRQTDTVVSCVGGFGKTDAYMGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRAEKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLARL--AGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAV 605
            V+ G  V+++SR G P   G W   V W+  +          L  T  VVS +GGFG ++  M  INGEAN+  V+AA D GV +F+ +SVHDY  P+F+   GYF GKR+AE  V   + + GV+L+PAF+YG R V     NG E    +PL  +G PL R+  A     K +    LP +D+    P+SV+ V  + +
Sbjct:  138 VSKGIEVVSVSRSGRPSYTGSWVDQVTWIAGDVFYMSWNEVLLGAT-AVVSTLGGFG-SEEQMKKINGEANVLAVDAAKDFGVPKFILISVHDYNLPTFLLSSGYFTGKRKAESEVLSKYPNSGVVLRPAFIYGNRKV-----NGFE----IPLNLIGEPLERILNATQNFIKPLGS--LPASDLLLAPPVSVDDVAFAVI 325          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8706.20244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJU6_ECTSI4.490e-12778.72NAD(P)-bd_dom domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L1C5_9PHAE3.640e-12578.15NAD(P)-bd_dom domain-containing protein n=1 Tax=Ec... [more]
A0A835ZDA8_9STRA1.490e-5945.99NAD(P)-bd_dom domain-containing protein (Fragment)... [more]
A0A061SCL0_9CHLO1.250e-3239.60Nad-binding protein n=1 Tax=Tetraselmis sp. GSL018... [more]
A0A7S0MZM9_9CHLO2.700e-3139.71Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A388KKI2_CHABU6.920e-3038.12NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
A0A388KGE5_CHABU9.670e-3039.45NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
A0A7S4LN96_9EUGL2.740e-2937.85Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A5J4YUC1_PORPP2.820e-2837.62NAD(P)-bd_dom domain-containing protein n=1 Tax=Po... [more]
A0A1D1ZIT8_9ARAE3.670e-2838.81Uncharacterized protein At1g32220, chloroplastic (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8706contigM-pyrifera_M_contig8706:5657..9698 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score268.9
Seed ortholog evalue1.7e-69
Seed eggNOG ortholog2880.D7FJU6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquinone-6 biosynthetic process
EggNOG OGsCOG0702@1,KOG4288@2759
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-10_000520.1
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1531
Cds size513
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816779.9830852-UTR-M-pyrifera_M_contig8706:5656..57661622816779.9830852-UTR-M-pyrifera_M_contig8706:5656..5766Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8706 5657..5766 +
1692278174.089504-UTR-M-pyrifera_M_contig8706:5656..57661692278174.089504-UTR-M-pyrifera_M_contig8706:5656..5766Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8706 5657..5766 +
1622816779.9967425-UTR-M-pyrifera_M_contig8706:6258..63421622816779.9967425-UTR-M-pyrifera_M_contig8706:6258..6342Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8706 6259..6342 +
1692278174.1014779-UTR-M-pyrifera_M_contig8706:6258..63421692278174.1014779-UTR-M-pyrifera_M_contig8706:6258..6342Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8706 6259..6342 +
1622816780.0577273-UTR-M-pyrifera_M_contig8706:8874..96981622816780.0577273-UTR-M-pyrifera_M_contig8706:8874..9698Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8706 8875..9698 +
1692278174.1572623-UTR-M-pyrifera_M_contig8706:8874..96981692278174.1572623-UTR-M-pyrifera_M_contig8706:8874..9698Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8706 8875..9698 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816780.0074465-CDS-M-pyrifera_M_contig8706:6342..63841622816780.0074465-CDS-M-pyrifera_M_contig8706:6342..6384Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8706 6343..6384 +
1692278174.1130047-CDS-M-pyrifera_M_contig8706:6342..63841692278174.1130047-CDS-M-pyrifera_M_contig8706:6342..6384Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8706 6343..6384 +
1622816780.018452-CDS-M-pyrifera_M_contig8706:7539..76801622816780.018452-CDS-M-pyrifera_M_contig8706:7539..7680Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8706 7540..7680 +
1692278174.1263914-CDS-M-pyrifera_M_contig8706:7539..76801692278174.1263914-CDS-M-pyrifera_M_contig8706:7539..7680Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8706 7540..7680 +
1622816780.0319278-CDS-M-pyrifera_M_contig8706:8243..83971622816780.0319278-CDS-M-pyrifera_M_contig8706:8243..8397Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8706 8244..8397 +
1692278174.136936-CDS-M-pyrifera_M_contig8706:8243..83971692278174.136936-CDS-M-pyrifera_M_contig8706:8243..8397Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8706 8244..8397 +
1622816780.0448394-CDS-M-pyrifera_M_contig8706:8698..88741622816780.0448394-CDS-M-pyrifera_M_contig8706:8698..8874Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8706 8699..8874 +
1692278174.1469588-CDS-M-pyrifera_M_contig8706:8698..88741692278174.1469588-CDS-M-pyrifera_M_contig8706:8698..8874Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8706 8699..8874 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8706.20244.1prot_M-pyrifera_M_contig8706.20244.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8706 6343..8874 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8706.20244.1

>prot_M-pyrifera_M_contig8706.20244.1 ID=prot_M-pyrifera_M_contig8706.20244.1|Name=mRNA_M-pyrifera_M_contig8706.20244.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp
MGLINGEANIKLVEAAADAGVKQFVFMSVHDYKAPSFVKRVGYFDGKRRA
EKVVGELFGDKGVILKPAFVYGERSVKLTGPNGRERTLNVPLQRLGGPLA
RLAGTGVAKKIAESGLPLADVAWTQPLSVEAVGKSAVRCCLGGVENLGSR
SKDSGDAVVLRVRDIAQMVA*
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mRNA from alignment at M-pyrifera_M_contig8706:5657..9698+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8706.20244.1 ID=mRNA_M-pyrifera_M_contig8706.20244.1|Name=mRNA_M-pyrifera_M_contig8706.20244.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4042bp|location=Sequence derived from alignment at M-pyrifera_M_contig8706:5657..9698+ (Macrocystis pyrifera P11B4 male)
AGCAGCTCGTGGCGGCCGGGTGCACCGTGATCGCGCTCAGCCGCAAGGGC GTCCCCGAGAACGGAGGGGTGTGGACGAAGTCCGTCAAGTGGGTCGAGGC AAATGCCGTGGTGAGGGGGGGTGAAGGGGCACTCAGTAGTCTGCAGCCCG CAAATGGGGCTTAAAGACACCCTCGAGAGCTACCTTGAAATGCGAAAGCA CCTTGATCGTGTTTTGGCTTGCACGAAGCAAGTTGAGACTGCTGGTTGCA AATGACGAACGAGCGGGCGTAGATGCTTGGCTTTGACGTTAGACCTGCTC TCGGCGTTTCAGATTTGTCTTGGAAGCCGTTGCAATCCCTAGGGAAACCG AACGACCTTCGTGGATATCGCGTGGTCCAGCACGTACCCCAAACAGAAGG TTTTGTTGCGCACGATTGATATGGACTCGCCCGCGACTCGCCCGCGGAAA CTCGACAATTCAGTGTGCGCCGCTCTCCTCGCGCGATGCTATGGCCCTAC GAGAGTTACCTGGCCAATAGTTGTGTCCCCGTCCTCGGCCCCTGTACGCG TTCTGTACGTCCCTGTTGTTTCTTCCCCGCGCTTTCGTTTTTTGGCGCTC AGAATCAAGACCTCTACCGGGCCGAGCTGCGCCAGACCGATACCGTAGTA TCGTGCGTGGGCGGCTTTGGAAAGACAGATGCGTACATGGGTCTGATCAA TGGCGAGGCCAACATCAAGCTCGTGGAGGTGCGATCACGTATTGTATATT GCTGTAGACTAATCTGTGTGTTGGATTGTGTGCTGGTACGTCTAGGGTAG GGCCCTGCCGGCTTCTTGTATAGCCGTGCGTCGTCGATTGCATAGTCGTC GCCGTCTAGCCCTGGGTAGGTATTTTTTCACCATCAGCGAGACTACCATG GTCATGGGAAAACTTTGTTGGGGTCGTCGCGTAGTTCGCGTCATGTGAAG ATTGGTCATTTCCTGCAGAACGAGATCCCCCTTTGTGTCGGTGAGAGAGG TCGGTGGTAATTTTTCTATCTAGTATGGTATTCGTGGGGCAGTGAGAAAG CGGAGGGCCCACGGCTACGAGTATGGCTTAGAAAACGGGGACCACATGGC GGAGTTTTCCCTTAGTCGGGGTCAGGCGCCGCGCGTGCCAAATGCACCAG GGGGTGTATCTGTTCTGTTGATGATGATCTCTCTATTGAACAGGGCCACG TGAACTTTATTGCGGACACTGTTTGTGGTCAAACCTTGTTGATATTTTGT TCGATGCATTATGTGTGGCATCTGGAAGCGCTTCAGGCTGTGTGACTATA CGCGTAGTTGTCTCTCGCAAACTGGCGTTGAGCTCAAACAGCTCTTCGAA CAGCAACGCTGCAGTGTTTCGATCCAGAGGTAGGCTACAGTGCGGTGGCG TACTTCTTCTCTTTTCCGAGGGGAATCAAGCCTCTTCATGTCGTCCTTGT ACATGAGATCAGGACTGGATTGTTTAAGCCCGCTCCAAATCTTCTTTGTC ACTTCTGTGCACCACAAATGTTTTTCCTTCCGTGTACAAAATAGTTTCTG AGCCTTCTTGTCAGAGAAGGCATGTCCCGTTCTGAAGAGCATGGTGAGGC ATTGGGCGTCATTGTCGCGTTTGGTTGCATGCTGTGCCAAGCCAGAGCAG ATGTGGGAAACATCGCAAGGCATCGGCAGCAACAACCATGACCGCCTATT CCTGGACTGCGGACAATCACTAAAACTGCACCAGCACAGCCCAATGATCC CTGTCTGTCTGCCGTGCCATCCTCAAAGTTGGCCCCTCCTTCATGGCTGT ACCCCAAGTCACTCACAAGAGCTTGTTTATTCTTTGTTTCTGCGCTGCGG CAATGTTGCGCACCGTCTTACAACTAACGCCAGGCGGCTGCGGACGCGGG TGTGAAGCAGTTCGTGTTCATGTCTGTGCACGACTACAAGGCACCCTCGT TCGTAAAGCGTGTGGGATACTTCGACGGGAAGCGGCGCGCGGAAAAGGTC GTCGGGGAACTGTTCGGGGACAAGGCGAGTTGACTGCTTTCGTTCGCAGT GTTGTTTCGTTGTGTAGTCAATAGTGCAAAGTCCGCAGTGTCATAGTGCC TAGGGGGCAAGACGCTTGGCCCTCCCGTCGTTTGTCGTCTATTCACGAGG CTCGTGCTGGAGGAGATAGGAATGGGGTGACATCGGAAGGCCGAGGAGGA AACCTCCAAGGATACAGGGGGTGATCATGCGTTCGTAATGCGTGGCATAT TGAATATTGCTTCTCGCTTCACGTGTGCTCAAGCGCTGCCAAGCACGTTC ATCGAATGGTGTAGCTCACGCTATCATGAACACGCCGAAACCCCTGTTTC CTTTGCCGAGTACTTGGGGTTTATTATGTCATTGTCATGGTGGGCCAGCG ATGTCTGCCACGCAGCGGAGGTGCCCCCCCGCTCTGAGCGGGACAAGGTG ATGTGCTGGCCGTGGGGGTTGACATCCCCGTCACTCGCAACAGCTCATGA TGTCTCTCGAACCGATCGTGTGCTCGCAACATCTCACCATGACTCTCGAA ACGACTCTCGAACCTATTCCGTGCGCTCACCATGCAGGGGGTGATTTTGA AGCCGGCATTCGTCTACGGCGAGCGCAGTGTGAAGTTGACTGGGCCCAAC GGCCGGGAGCGAACGCTTAACGTGCCCTTGCAGCGGCTAGGCGGACCCCT AGCGCGGCTCGCTGGTACCGGTGTAGCCAAGAAAATTGCTGGTGGGTGTT TCAGACCGCGGTCGGTGCTCGAGAGCTCGCCGCACTGTTGAAGGCTGAAG GGCTCTCTTTAGAAAGACAGGACGCTTTGTCGTGCAGTGTAGTTCTTTTT TGGCGCACCAGTAAAATCGACGGTGATATCCTCGACCTTCATTGTATGCG GCACGCTGATCCTCTCCAACCTCTGCTGTACCCTTCGCTGCATGTCTGCT GTTGACGCTTCAAGAGCCCACTTTAACACCGGAATCCCTTCCCTCCTCCG TCCCTCCCTCGCTCGCTTTCTCTGCTACACTTGCGCATGCAGAGTCGGGG CTTCCACTCGCTGACGTCGCTTGGACCCAGCCGCTAAGCGTCGAGGCGGT CGGCAAGTCGGCGGTACGCTGCTGCCTGGGAGGCGTAGAGAACCTCGGAA GCAGGAGCAAAGACTCCGGGGATGCGGTGGTGCTCAGGGTCCGAGACATC GCCCAGATGGTGGCGTGAGGCAGTTGGTCTTGAACGGGAACCTTAGCCCC CCGCCCTGGTGCTAAAAATCGGTGACCGCGGCAGGTCGTTGCCAGAACGG TGGACAGCACGGAAGATGTTCGTTGTGCGAACGGGCCGGGCAAAAAGCCA ACTGCCGTCGCTGTGGGAGTGGCTCGGTCTTCTCGAGCGCAGGAATTGTC CATACCCTTGTCGCTGCATGTCATGTAGAGCTTAGTGTCGTCTGTCGTGT GGTAGCGCATGGTAGAGAACGGAAGCAGCGGTGGCCCCGGGTGTCTATGA GCGTTGAGCGTGACTGGCCACGGGCCGTGTTCCGCGCCAGCACTGACTGT AAAAAACGGCGAAAATATGTGACGACCTAGTCTAATGGGCTAGACGAAGC TCGGAATTCTCGTAAGCCAGGCTGCACTTCTGCCTGTCTGTTGGCGGTCC CAATTTTGTTGGATGTCGTGTGGTGGTGTTGGAACTCAATGGGTGCGGAC CATGAACTGCAGTGCGAGTAGTGACACCTATTGGGCTGGGCGCCCGGCGG TGAACTCGAGTGTTCGGGTGATCTGTAGTAGGTGTGCGTGTTTGGCCTAA TTTACTGTTCGCTCGGATGGTGCAAGGAGAAGCGCTTCGAGCTCCGTCCG CGGTGATAAGACACTTTGTACAACGAATTCTTGTGGAACTTGCCTTGCAA AAAGTAGACCGGTACTGACCGTTCAGCACGATGTTGCATGAATGACGTAT TTCAAGTAGACAACAACAGCTTGATCAACATCTTGCAGTAAATTATATCT AACATTTGCGAATGAAGGCGCACTTAAGAACCACGTGGGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8706:5657..9698+

>mRNA_M-pyrifera_M_contig8706.20244.1 ID=mRNA_M-pyrifera_M_contig8706.20244.1|Name=mRNA_M-pyrifera_M_contig8706.20244.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig8706:5657..9698+ (Macrocystis pyrifera P11B4 male)
ATGGGTCTGATCAATGGCGAGGCCAACATCAAGCTCGTGGAGATGGGTCT
GATCAATGGCGAGGCCAACATCAAGCTCGTGGAGGCGGCTGCGGACGCGG
GTGTGAAGCAGTTCGTGTTCATGTCTGTGCACGACTACAAGGCACCCTCG
TTCGTAAAGCGTGTGGGATACTTCGACGGGAAGCGGCGCGCGGAAAAGGT
CGTCGGGGAACTGTTCGGGGACAAGGCGGCTGCGGACGCGGGTGTGAAGC
AGTTCGTGTTCATGTCTGTGCACGACTACAAGGCACCCTCGTTCGTAAAG
CGTGTGGGATACTTCGACGGGAAGCGGCGCGCGGAAAAGGTCGTCGGGGA
ACTGTTCGGGGACAAGGGGGTGATTTTGAAGCCGGCATTCGTCTACGGCG
AGCGCAGTGTGAAGTTGACTGGGCCCAACGGCCGGGAGCGAACGCTTAAC
GTGCCCTTGCAGCGGCTAGGCGGACCCCTAGCGCGGCTCGCTGGTACCGG
TGTAGCCAAGAAAATTGCTGGGGGTGATTTTGAAGCCGGCATTCGTCTAC
GGCGAGCGCAGTGTGAAGTTGACTGGGCCCAACGGCCGGGAGCGAACGCT
TAACGTGCCCTTGCAGCGGCTAGGCGGACCCCTAGCGCGGCTCGCTGGTA
CCGGTGTAGCCAAGAAAATTGCTGAGTCGGGGCTTCCACTCGCTGACGTC
GCTTGGACCCAGCCGCTAAGCGTCGAGGCGGTCGGCAAGTCGGCGGTACG
CTGCTGCCTGGGAGGCGTAGAGAACCTCGGAAGCAGGAGCAAAGACTCCG
GGGATGCGGTGGTGCTCAGGGTCCGAGACATCGCCCAGATGGTGGCGTGA
AGTCGGGGCTTCCACTCGCTGACGTCGCTTGGACCCAGCCGCTAAGCGTC
GAGGCGGTCGGCAAGTCGGCGGTACGCTGCTGCCTGGGAGGCGTAGAGAA
CCTCGGAAGCAGGAGCAAAGACTCCGGGGATGCGGTGGTGCTCAGGGTCC
GAGACATCGCCCAGATGGTGGCGTGA
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