mRNA_M-pyrifera_M_contig87021.20234.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87021.20234.1
Unique NamemRNA_M-pyrifera_M_contig87021.20234.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Match: A0A0F7SNW8_PHARH (Molecular chaperone (DnaJ superfamily) n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SNW8_PHARH)

HSP 1 Score: 89.4 bits (220), Expect = 8.630e-19
Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 1 
Query:    1 HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFGKKGISQGMGEVNPRQLFSMLFGGGKFAHIIGEISFG 222
            HPDKN DDP+AEEKFKE+A+AY+VLSD   R  Y+ FG KG     G V+P +LF  LFGG KF  IIG+IS G
Sbjct:  407 HPDKNRDDPDAEEKFKEVAIAYQVLSDPALRKKYNEFGSKGNEPAEGFVDPEELFGTLFGGEKFNDIIGQISIG 480
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BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Match: A0A284RD72_ARMOS (Related to DnaJ-like protein n=1 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284RD72_ARMOS)

HSP 1 Score: 87.4 bits (215), Expect = 4.040e-18
Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 1 
Query:    1 HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFGKKGISQGMGEVNPRQLFSMLFGGGKFAHIIGEIS 216
            HPDKNPDDP AEE+FKE+A+AY+ LSDD+ R  Y+ FG K  +   G V+P ++F  +FGG +FA IIG+IS
Sbjct:  131 HPDKNPDDPNAEERFKEIAIAYQTLSDDQLRKKYNEFGPKESAPEGGYVDPEEVFGAIFGGDRFAPIIGQIS 202
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BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Match: A0A7S4P3U0_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4P3U0_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 5.490e-18
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 1 
Query:    1 HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFGKKGISQGMGEVNPRQLFSMLFGGGKFAHIIGEI 213
            HPDKNP++PEAEEKFK+++ AY+VLSD +KR  Y R GK  +  G GE++P  LF  LFGGG F HI G+I
Sbjct:   34 HPDKNPNNPEAEEKFKQISEAYQVLSDADKRAAYDRLGKNDMGAG-GEMDPTALFEQLFGGGAFEHIFGKI 103
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BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Match: A0A8H5H713_9AGAR (J domain-containing protein n=1 Tax=Tricholomella constricta TaxID=117010 RepID=A0A8H5H713_9AGAR)

HSP 1 Score: 86.7 bits (213), Expect = 6.770e-18
Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = 1 
Query:    1 HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFGKKGISQGMGEVNPRQLFSMLFGGGKFAHIIGEISFGEPEQGDAEELTEEEREKG 276
            HPDKNPDDP AEE+FKE+A+AY+ LSDD  R  Y+ FG K  +   G V+P ++F  +FGG +F+ IIG+IS     +   +E  + E E+G
Sbjct:  137 HPDKNPDDPHAEERFKEIAIAYQTLSDDTLRKKYNEFGSKESAPEGGFVDPEEVFGAIFGGERFSSIIGQISLARDMKAALQEAEDAENEEG 228
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BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Match: A0A2H3EH11_ARMGA (DnaJ-domain-containing protein n=3 Tax=Physalacriaceae TaxID=862241 RepID=A0A2H3EH11_ARMGA)

HSP 1 Score: 86.3 bits (212), Expect = 9.080e-18
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 1 
Query:    1 HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFGKKGISQGMGEVNPRQLFSMLFGGGKFAHIIGEIS 216
            HPDKNPDDP AEE+FKE+A+AY+ LSDD+ R  Y+ FG K  +   G V+P ++F  +FGG +FA IIG IS
Sbjct:  131 HPDKNPDDPNAEERFKEIAIAYQTLSDDQLRKKYNEFGPKESAPEGGYVDPEEVFGAIFGGDRFAPIIGPIS 202
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BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Match: A0A0C3BZF6_HEBCY (J domain-containing protein n=1 Tax=Hebeloma cylindrosporum h7 TaxID=686832 RepID=A0A0C3BZF6_HEBCY)

HSP 1 Score: 85.9 bits (211), Expect = 1.360e-17
Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 1 
Query:    1 HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFGKKGISQGMGEVNPRQLFSMLFGGGKFAHIIGEIS 216
            HPDKNPDDP AEE+FKE+A+AY+ LSDD  R  Y+ FG K I+   G V+P ++F  +FGG +F  IIG IS
Sbjct:  148 HPDKNPDDPHAEERFKEIAIAYQTLSDDALRRKYNEFGPKEIAPEGGYVDPEEVFGAIFGGERFVPIIGNIS 219
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BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Match: A0A0L0VTL8_9BASI (J domain-containing protein n=4 Tax=Puccinia striiformis TaxID=27350 RepID=A0A0L0VTL8_9BASI)

HSP 1 Score: 85.5 bits (210), Expect = 1.790e-17
Identity = 46/75 (61.33%), Postives = 53/75 (70.67%), Query Frame = 1 
Query:    1 HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFGKKGISQGMGEVNPRQLFSMLFGGGKFAHIIGEISFGE 225
            HPDKNPDDPEA EKFK LA+AY  LSD E R  Y+ FGK+  + G G V+P  +FS LFGG KF  IIG IS G+
Sbjct:  114 HPDKNPDDPEAGEKFKSLAVAYNTLSDPELRKKYNEFGKQQENDG-GFVDPEAVFSTLFGGEKFQDIIGTISLGQ 187
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BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Match: A0A1J8QDD2_9AGAM (J domain-containing protein (Fragment) n=1 Tax=Rhizopogon vesiculosus TaxID=180088 RepID=A0A1J8QDD2_9AGAM)

HSP 1 Score: 85.5 bits (210), Expect = 1.950e-17
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1 
Query:    1 HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFGKKGISQGMGEVNPRQLFSMLFGGGKFAHIIGEISFGEPEQGDAEELTEEEREKG 276
            HPDKNPDDP AEE+FKE+A+AY+ LSD   R  Y+ FG K      G V+P ++F  +FGG +FA IIG+IS  +  +   +E+ E E E G
Sbjct:  473 HPDKNPDDPHAEERFKEIAIAYQTLSDPALRKKYNEFGSKESQPEGGFVDPEEIFGAMFGGERFAPIIGQISLAKDMKSALQEVEEAEGEDG 564
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BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Match: A0A1B7MU68_9AGAM (DnaJ-domain-containing protein n=1 Tax=Rhizopogon vinicolor AM-OR11-026 TaxID=1314800 RepID=A0A1B7MU68_9AGAM)

HSP 1 Score: 85.1 bits (209), Expect = 2.390e-17
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1 
Query:    1 HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFGKKGISQGMGEVNPRQLFSMLFGGGKFAHIIGEISFGEPEQGDAEELTEEEREKG 276
            HPDKNPDDP AEE+FKE+A+AY+ LSD   R  Y+ FG K      G V+P ++F  +FGG +FA IIG+IS  +  +   +E+ E E E G
Sbjct:  135 HPDKNPDDPHAEERFKEIAIAYQTLSDAALRKKYNEFGSKESQPEGGFVDPEEIFGAMFGGERFAPIIGQISLAKDMKSALQEVEEAEGEDG 226
[Close]
BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Match: A0A067MDN4_9AGAM (J domain-containing protein n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MDN4_9AGAM)

HSP 1 Score: 85.1 bits (209), Expect = 2.460e-17
Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 1 
Query:    1 HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFG-KKGISQGMGEVNPRQLFSMLFGGGKFAHIIGEISFG 222
            HPDKN DDP AEE FK++A+AY+VLSD E R  Y+ FG K+G  +G G V+P ++FS +FGG +FA IIGEIS G
Sbjct:  156 HPDKNRDDPTAEETFKQIAIAYQVLSDPELRKKYNEFGPKEGAPEG-GYVDPEEVFSAIFGGERFAPIIGEISLG 229
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87021.20234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F7SNW8_PHARH8.630e-1960.81Molecular chaperone (DnaJ superfamily) n=1 Tax=Pha... [more]
A0A284RD72_ARMOS4.040e-1856.94Related to DnaJ-like protein n=1 Tax=Armillaria os... [more]
A0A7S4P3U0_9EUKA5.490e-1859.15Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A8H5H713_9AGAR6.770e-1847.83J domain-containing protein n=1 Tax=Tricholomella ... [more]
A0A2H3EH11_ARMGA9.080e-1856.94DnaJ-domain-containing protein n=3 Tax=Physalacria... [more]
A0A0C3BZF6_HEBCY1.360e-1756.94J domain-containing protein n=1 Tax=Hebeloma cylin... [more]
A0A0L0VTL8_9BASI1.790e-1761.33J domain-containing protein n=4 Tax=Puccinia strii... [more]
A0A1J8QDD2_9AGAM1.950e-1748.91J domain-containing protein (Fragment) n=1 Tax=Rhi... [more]
A0A1B7MU68_9AGAM2.390e-1748.91DnaJ-domain-containing protein n=1 Tax=Rhizopogon ... [more]
A0A067MDN4_9AGAM2.460e-1760.00J domain-containing protein n=1 Tax=Botryobasidium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87021contigM-pyrifera_M_contig87021:5..280 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score86.3
Seed ortholog evalue8.3e-15
Seed eggNOG ortholog40492.XP_007310137.1
Preferred nameCAJ1
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005933,GO:0006457,GO:0006605,GO:0006625,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007031,GO:0008104,GO:0008150,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0015919,GO:0016043,GO:0016558,GO:0017038,GO:0030544,GO:0031072,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043574,GO:0044424,GO:0044444,GO:0044464,GO:0044743,GO:0045040,GO:0045184,GO:0046907,GO:0051087,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072655,GO:0072657,GO:0072662,GO:0072663,GO:0090150,GO:0090151
EggNOG free text desc.DnaJ-domain-containing protein
EggNOG OGs226T2@155619,38GRI@33154,3H0M0@355688,3NXFB@4751,3UZK1@5204,COG2214@1,KOG0691@2759
COG Functional cat.O
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Exons1
Model size276
Cds size276
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816779.6052203-CDS-M-pyrifera_M_contig87021:4..2801622816779.6052203-CDS-M-pyrifera_M_contig87021:4..280Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87021 5..280 +
1692278173.8959916-CDS-M-pyrifera_M_contig87021:4..2801692278173.8959916-CDS-M-pyrifera_M_contig87021:4..280Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87021 5..280 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87021.20234.1prot_M-pyrifera_M_contig87021.20234.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87021 5..280 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87021.20234.1

>prot_M-pyrifera_M_contig87021.20234.1 ID=prot_M-pyrifera_M_contig87021.20234.1|Name=mRNA_M-pyrifera_M_contig87021.20234.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp
HPDKNPDDPEAEEKFKELALAYEVLSDDEKRLVYHRFGKKGISQGMGEVN
PRQLFSMLFGGGKFAHIIGEISFGEPEQGDAEELTEEEREKG
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mRNA from alignment at M-pyrifera_M_contig87021:5..280+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87021.20234.1 ID=mRNA_M-pyrifera_M_contig87021.20234.1|Name=mRNA_M-pyrifera_M_contig87021.20234.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=276bp|location=Sequence derived from alignment at M-pyrifera_M_contig87021:5..280+ (Macrocystis pyrifera P11B4 male)
CACCCAGACAAGAACCCCGACGACCCCGAGGCAGAGGAGAAGTTCAAAGA
GCTGGCACTGGCCTACGAAGTGCTCTCCGACGACGAGAAGCGCCTGGTGT
ACCACCGCTTCGGCAAGAAGGGCATTTCCCAGGGCATGGGCGAGGTCAAC
CCCCGCCAGCTCTTCTCCATGCTCTTCGGCGGAGGAAAGTTCGCCCACAT
CATTGGAGAGATCTCCTTCGGCGAACCCGAGCAAGGAGACGCGGAGGAAC
TCACCGAGGAAGAGCGCGAGAAGGGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87021:5..280+

>mRNA_M-pyrifera_M_contig87021.20234.1 ID=mRNA_M-pyrifera_M_contig87021.20234.1|Name=mRNA_M-pyrifera_M_contig87021.20234.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig87021:5..280+ (Macrocystis pyrifera P11B4 male)
CACCCAGACAAGAACCCCGACGACCCCGAGGCAGAGGAGAAGTTCAAAGA
GCTGGCACTGGCCTACGAAGTGCTCTCCGACGACGAGAAGCGCCTGGTGT
ACCACCGCTTCGGCAAGAAGGGCATTTCCCAGGGCATGGGCGAGGTCAAC
CCCCGCCAGCTCTTCTCCATGCTCTTCGGCGGAGGAAAGTTCGCCCACAT
CATTGGAGAGATCTCCTTCGGCGAACCCGAGCAAGGAGACGCGGAGGAAC
TCACCGAGGAAGAGCGCGAGAAGGGTCACCCAGACAAGAACCCCGACGAC
CCCGAGGCAGAGGAGAAGTTCAAAGAGCTGGCACTGGCCTACGAAGTGCT
CTCCGACGACGAGAAGCGCCTGGTGTACCACCGCTTCGGCAAGAAGGGCA
TTTCCCAGGGCATGGGCGAGGTCAACCCCCGCCAGCTCTTCTCCATGCTC
TTCGGCGGAGGAAAGTTCGCCCACATCATTGGAGAGATCTCCTTCGGCGA
ACCCGAGCAAGGAGACGCGGAGGAACTCACCGAGGAAGAGCGCGAGAAGG
GT
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