mRNA_M-pyrifera_M_contig86714.20170.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86714.20170.1
Unique NamemRNA_M-pyrifera_M_contig86714.20170.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Match: A0A847GTK0_9BACT (DNA helicase n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GTK0_9BACT)

HSP 1 Score: 253 bits (646), Expect = 1.350e-73
Identity = 129/280 (46.07%), Postives = 180/280 (64.29%), Query Frame = 1
Query:    1 KQAILRAAAERVANIAGDTSWASVGVLLRTHDEIAEVMNHLRRLGVPACEVGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDDDVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELGYRYDTVPTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVPLVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRSTDNSVRETLCRLYVAVTRPVHAMHIVVPPS 840
            ++  LR AAER+A +       SVGVL+R +D +A V+  LR+L VPA E GGN + D+A V V +SLL++ADHPG TVARFHV +SPL   +    + DD AA  ++ ++R++LV+ GYG T+  W   L P CS+RE  RL QLV+  Y Y+   TLR  +F+  VEA +  DP P  V+VMT H AKGLQFD+VV+P ++ ++ G P      R D T+P++ VC   + +I  LLP   Q   + +TD +V E+LC LYVA+TR VH ++ V+PPS
Sbjct:  497 REVTLRNAAERIAELVAQAPGRSVGVLMRRNDGVARVIYELRKLDVPASEEGGNPLTDSAAVNVALSLLRIADHPGDTVARFHVAHSPLGAVVGLDDYRDDAAARQVSLEIRRTLVQLGYGATIQGWTQALAPHCSRRELSRLEQLVQAAYDYNATATLRADEFVAFVEATRIADPIPADVRVMTIHQAKGLQFDIVVLPELDGDIVGQPDPVVTHRDDCTSPVDCVCRYASANIQQLLPDSFQQMFEAATDRAVTESLCVLYVALTRAVHGLYAVIPPS 776          
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Match: A0A2E7D620_9PLAN (DNA helicase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D620_9PLAN)

HSP 1 Score: 252 bits (643), Expect = 3.680e-73
Identity = 130/276 (47.10%), Postives = 179/276 (64.86%), Query Frame = 1
Query:   13 LRAAAERVANIAGDTSWASVGVLLRTHDEIAEVMNHLRRLGVPACEVGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDDDVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELGYRYDTVPTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVPLVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRSTDNSVRETLCRLYVAVTRPVHAMHIVVPPS 840
            LR  A  V  +  ++  ASVGVL RT+  +A ++  L+R+G+PA E GGN + D+A V  ++SLL+LADHPG  +ARFHV +SPL + L F   +DDV    LA  VR SL++ GYGPT+ +W   L   C++R+  RL QLV L Y Y+   TLR  DF+  V  E+  DP+ + V+VMT H +KGLQFD+VV+P +E+ L G      VG  +P  PI+ VCL RNE I + LP+++Q    R+ +  V E LC LYVAVTRPVHA+H++V P+
Sbjct:  515 LRYTANYVKQLVRESPGASVGVLTRTNKAVARLIFELKRVGIPASEEGGNPLTDSAAVQAILSLLKLADHPGDRIARFHVASSPLGESLGFTDFEDDVECLKLAKTVRASLMDEGYGPTIYQWVVDLADACNRRDLSRLQQLVALAYAYENNVTLRTTDFLNFVRNERVSDPTGDDVRVMTVHQSKGLQFDIVVLPDLEKELLGSNDAVAVGSTNPAGPIDFVCLFRNEAIRSQLPSQLQDIFDRNDNQRVAEALCLLYVAVTRPVHALHMIVDPA 790          
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Match: A0A7C7SVH3_9PLAN (DNA helicase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7SVH3_9PLAN)

HSP 1 Score: 248 bits (633), Expect = 7.380e-72
Identity = 130/272 (47.79%), Postives = 172/272 (63.24%), Query Frame = 1
Query:   22 AAERVANIAGDTSWASVGVLLRTHDEIAEVMNHLRRLGVPACEVGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDDDVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELGYRYDTVPTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVPLVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRSTDNSVRETLCRLYVAVTRPVHAMHIVVPP 837
            AAER+A +A +    S+GVL RT+  I + +  LR+ GV A E GGN + D+A V +VMSLL++ADHPG TVARFHV  SPL + L F    DD AA  LA +VR SL+  GYGP++  WA TL    S R+  RL QLV L Y Y    +LRP  F   V  ++  DPS   V+VMT H +KGLQFD+VV+P ++  L+G PS    G++DP+ P++RV + R++ I  LLP E Q          V E+LC LYVAVTRPVH + +++PP
Sbjct:  500 AAERIAELAKENPGRSIGVLTRTNGSIVKTIFGLRQRGVEASEEGGNPITDSAAVQLVMSLLKMADHPGDTVARFHVAQSPLGEALQFREFSDDAAANRLALEVRSSLLALGYGPSVQRWAETLETTSSARDCKRLNQLVMLAYEYQRFASLRPSQFCDFVVGKRIPDPSSADVRVMTIHQSKGLQFDIVVLPDLDMALSGQPSALVSGQSDPSQPVDRVSVYRSKEIQELLPPEFQKMFDDDARQKVMESLCVLYVAVTRPVHMLEMIIPP 771          
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Match: A0A7X7F2T1_9BACT (DNA helicase n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A7X7F2T1_9BACT)

HSP 1 Score: 244 bits (624), Expect = 1.540e-70
Identity = 127/274 (46.35%), Postives = 173/274 (63.14%), Query Frame = 1
Query:   22 AAERVANIAGDTSWASVGVLLRTHDEIAEVMNHLRRL-GVPACEVGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDDDVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELGYRYDTVPTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVPLVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRSTDNSVRETLCRLYVAVTRPVHAMHIVVPPS 840
            AA R+A +       S+GVL+R +  +A ++  LR+   + A E GGN + D+  V +++SLL+LADHPG T +RFHV  SPL   L F R DDD AA  L+A++R+ L++ GYGP + +W   L P C  R+  RL QL+E+ Y Y +  T R  DFI  V  ++  DP+   V+VMT H AKGLQFD+VV+P ++  L G PSR  VGRA PTAP+ERVC    E +  LLP E Q+  ++    S  E LC LYVA+TR VHA+H++V PS
Sbjct:  496 AAARIAELHAAAPGRSIGVLVRRNASVARLIYRLRKTYHIAASEEGGNPLGDSPAVQLILSLLRLADHPGDTASRFHVAQSPLGAALDFTRFDDDAAARRLSAELRRRLLDEGYGPAIYDWTRQLAPSCDARDLSRLVQLIEMAYGYQSRATERADDFIDLVSRQRVEDPTSADVRVMTVHQAKGLQFDIVVLPELDYRLLGQPSRMVVGRAGPTAPVERVCRYVGEGVRPLLPREFQSMFEKDRQQSAEEALCLLYVALTRAVHALHLIVAPS 769          
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Match: A0A257THY3_9BACT (DNA helicase (Fragment) n=1 Tax=Planctomycetia bacterium 21-64-5 TaxID=1970542 RepID=A0A257THY3_9BACT)

HSP 1 Score: 238 bits (606), Expect = 1.830e-70
Identity = 131/280 (46.79%), Postives = 168/280 (60.00%), Query Frame = 1
Query:    1 KQAILRAAAERVANIAGDTSWASVGVLLRTHDEIAEVMNHLRRLGVPACEVGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDDDVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELGYRYDTVPTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVPLVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRSTDNSVRETLCRLYVAVTRPVHAMHIVVPPS 840
            ++  L  AA+ +A +  +    SVGVL+RT+D I  ++  L    V A E GGN + D+  V VV+SLL +ADHPG T ARFHV +SPL   L    + DD  A  L+  VRQ L+  GYGPTL  WA  L   C  R+  RL QLVEL YR+D    LR RDF   V+ E+   PSP  V+VMT H AKGL+FD+VV+P ++  L G      VGRA P A +  VC   NE + +LLP E+ A         VRE+LC LYVA+TR VHA+HI+VPP+
Sbjct:   69 RETTLGFAADEIARLVREAPGRSVGVLVRTNDAIVTLIQELAGRKVTASEEGGNPLTDSPAVAVVLSLLAIADHPGDTAARFHVAHSPLGPVLGLSDYADDRQAERLSLAVRQQLLVRGYGPTLYRWARELAEHCGPRDASRLEQLVELAYRFDPDAGLRTRDFAALVQRERVEAPSPADVRVMTIHKAKGLEFDIVVLPQLDYKLRGQTPPVLVGRAAPAAAVNLVCKYPNEALRSLLPTEIGAAYDAYQQRVVRESLCLLYVALTRAVHALHIIVPPA 348          
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Match: A0A1P8WGJ7_9PLAN (DNA helicase n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WGJ7_9PLAN)

HSP 1 Score: 241 bits (615), Expect = 2.890e-69
Identity = 129/273 (47.25%), Postives = 168/273 (61.54%), Query Frame = 1
Query:   22 AAERVANIAGDTSWASVGVLLRTHDEIAEVMNHLRRLGVPACEVGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDDDVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELGYRYDTVPTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVPLVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRSTDNSVRETLCRLYVAVTRPVHAMHIVVPPS 840
            AA RVA +       SVGVL R++  + +V+  LR+LG+ A E GGN + D+A V ++MSLL+LADHPG++VARFHV  SPL   L F   D    A  LA  VR+ L   GYGP L EWA  L      R + RL QLVELGY + T  TLR  DF+  ++  K  DP+ + V+VMT H +KGL+FD+VV+P ++  L G PS+F   +  PT  I+RVC  RN  I  LLPA+ Q     +    + E LC LYVAVTR VHA+H+V+ PS
Sbjct:  507 AAARVAELTRKAPGMSVGVLTRSNRVVGKVIFELRKLGITASEEGGNPLTDSAAVQIIMSLLKLADHPGNSVARFHVATSPLGKALQFTPTDGSYRAEQLARSVRRRLQSEGYGPVLQEWAGILTHHSGPRGKRRLSQLVELGYVWQTHATLRTVDFLNFLDLRKVPDPTSDNVRVMTVHQSKGLEFDIVVLPDLDTKLVGQPSQFVANKPSPTERIDRVCRYRNSDIRELLPADFQKMFDDARRTEISEALCVLYVAVTRAVHALHMVIAPS 779          
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Match: A0A2E8B247_9PLAN (DNA helicase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8B247_9PLAN)

HSP 1 Score: 239 bits (609), Expect = 2.050e-68
Identity = 125/276 (45.29%), Postives = 176/276 (63.77%), Query Frame = 1
Query:   13 LRAAAERVANIAGDTSWASVGVLLRTHDEIAEVMNHLRRLGVPACEVGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDDDVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELGYRYDTVPTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVPLVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRSTDNSVRETLCRLYVAVTRPVHAMHIVVPPS 840
            L+ AA R+ +I  ++ + SVGVL R +  +  ++  L+RLGV A E GGN + D+A V +++S L+LADHPG  +AR HV +SPL   L      DD  A  ++ ++R++L+E GYG  L  W+N L P C+ R+  RL QLV+  Y YD+  TLR  DF+  +E    +DPS   V+VMT H AKGLQFD VV+  ++  L G P  + VGRA P API  VC+ RNE+I +LLPA +Q   Q++    V E LC LYVA+TR VHA+H+++ P+
Sbjct:  521 LQFAARRILDIVQNSPFQSVGVLARRNKVVGRLVFELQRLGVSASEEGGNPLTDSAAVQLLLSTLRLADHPGDLIAREHVAHSPLGKHLGLQSGKDDAQACRVSQNLRKALLEHGYGVCLYRWSNELSPLCNTRDWRRLTQLVDTAYVYDSHATLRSGDFVRHIETHHVLDPSTHPVRVMTVHQAKGLQFDSVVLVDLDSPLRGQPPPYVVGRASPIAPINEVCIYRNENIQSLLPARIQNLFQQAVSREVAEDLCVLYVALTRAVHALHMIIAPA 796          
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Match: A0A3B9CTV3_9PLAN (DNA helicase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9CTV3_9PLAN)

HSP 1 Score: 236 bits (603), Expect = 1.270e-67
Identity = 123/272 (45.22%), Postives = 167/272 (61.40%), Query Frame = 1
Query:   25 AERVANIAGDTSWASVGVLLRTHDEIAEVMNHLRRLGVPACEVGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDDDVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELGYRYDTVPTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVPLVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRSTDNSVRETLCRLYVAVTRPVHAMHIVVPPS 840
            A+RVA +A     AS+GVL R +  ++ ++  LRRLG+ A E GGN + D+  V +VMS+LQ+ADHPG+T+ARFHV  SPL   L +  H     A   A  +R+ L   GYG  L EWA+ LLPFC  R R RL Q+VEL Y +    TLR  DF+  +  ++  DP+ + ++VMT H +KGL+FD+VV+P ++  L G P+ F V +  PT PI+RVC  RN  I  LLP   Q        + + E LC LYVA+TR  HA+H+VV PS
Sbjct:  507 AQRVAELARKVPKASIGVLARKNSVVSRLIYELRRLGIAASEEGGNPLSDSVAVQLVMSVLQVADHPGNTIARFHVAQSPLGKALGYTNHRRHDLAEQFARRIRRRLQAEGYGKVLREWADELLPFCGPRGRRRLNQMVELSYTWQAHATLRTSDFLRFLSRKQVPDPTTDNIRVMTVHQSKGLEFDIVVLPDLDGRLIGQPNEFVVNKPSPTEPIDRVCRYRNASIQDLLPDGFQKMFADERHSDISEALCVLYVAITRARHALHMVVAPS 778          
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Match: UPI0019C4A515 (UvrD-helicase domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019C4A515)

HSP 1 Score: 236 bits (601), Expect = 2.240e-67
Identity = 123/278 (44.24%), Postives = 173/278 (62.23%), Query Frame = 1
Query:   13 LRAAAERVANIAGDTSWASVGVLLRTHDEIAEVMNHLRRLGVPACEVGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDDDVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELGYRYDTV---PTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVPLVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRSTDNSVRETLCRLYVAVTRPVHAMHIVVPP 837
            LRAAA  +A +A   S   +GVL R+++ +A+++  L++LGVPA E GG+ + D+A V +++SLL+LADHPG  +ARFHV  SPL     F    DD AA  LA  +R+SL+  GYGP +  W+  L    S R+R RL QL++L   Y       TLRP DF   V  E+  DPS + ++VMT H AKGLQFD+VV+P ++  + G       G  DP  P + VCL R+E I  LLP+E+Q   ++ T+    E+LC LYVA+TR VHAM++++ P
Sbjct:  517 LRAAARLIAELATKHSQREIGVLTRSNEAVAQLIFELQQLGVPASEEGGHPLTDSAAVRLLLSLLKLADHPGDRIARFHVATSPLGAAFKFEDFRDDSAAARLAESLRRSLLSDGYGPCIAVWSKLLFDHGSPRDRARLNQLIKLADAYSAAGGSATLRPTDFAEFVREERVADPSGDRIRVMTVHQAKGLQFDIVVLPELDHQIPGQSPDLVAGNVDPAEPPDAVCLYRSESIQQLLPSELQQLFEQDTERRTHESLCLLYVALTRAVHAMYLLIAP 794          
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Match: A0A2E3MLD6_9PLAN (DNA helicase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3MLD6_9PLAN)

HSP 1 Score: 233 bits (595), Expect = 1.650e-66
Identity = 124/279 (44.44%), Postives = 172/279 (61.65%), Query Frame = 1
Query:   10 ILRAAAERVANIAGDTSW--ASVGVLLRTHDEIAEVMNHLRRLGVPACEVGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDDDVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELGYRYDTVPTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVPLVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRSTDNSVRETLCRLYVAVTRPVHAMHIVVPPS 840
            +L  AA RVA I+  T     S+G+L+R ++ + ++++ L R  +PA E GGN + D+ GV +++SLLQL+DHPG T  RFHV +S L + L   RHDDD  A  LA  VR  L+ +GYGPTL+ WA+ L+     RE  RL +LVEL   Y +  TLRP DF+  V A +  DP    ++VMT H AKGLQFD VV+P ++  LTG P  F   R   TAPI+ VC         L+P E+Q  L  +   +V E+LC +YVA+TR VHA+H+++ P+
Sbjct:  503 LLDFAAHRVAQISKKTEEYAPSIGILVRRNETVRQLIDRLHRANIPASEEGGNPLTDSQGVQLILSLLQLSDHPGDTAKRFHVAHSKLGEALGMQRHDDDQVAIELAEKVRADLMLAGYGPTLERWAHILVNRSDSREASRLQKLVELADAYQSQATLRPVDFVNYVTAARVTDPGGSNIRVMTIHQAKGLQFDAVVLPELDAQLTGQPPAFVAHRPSATAPIDLVCRYVGAATRQLMPREIQQVLAEAKQRTVFESLCVMYVAMTRAVHALHLLISPA 781          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86714.20170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847GTK0_9BACT1.350e-7346.07DNA helicase n=1 Tax=Candidatus Anammoximicrobium ... [more]
A0A2E7D620_9PLAN3.680e-7347.10DNA helicase n=1 Tax=Planctomycetaceae bacterium T... [more]
A0A7C7SVH3_9PLAN7.380e-7247.79DNA helicase n=1 Tax=Planctomycetaceae bacterium T... [more]
A0A7X7F2T1_9BACT1.540e-7046.35DNA helicase n=2 Tax=Planctomycetia TaxID=203683 R... [more]
A0A257THY3_9BACT1.830e-7046.79DNA helicase (Fragment) n=1 Tax=Planctomycetia bac... [more]
A0A1P8WGJ7_9PLAN2.890e-6947.25DNA helicase n=1 Tax=Fuerstiella marisgermanici Ta... [more]
A0A2E8B247_9PLAN2.050e-6845.29DNA helicase n=1 Tax=Planctomycetaceae bacterium T... [more]
A0A3B9CTV3_9PLAN1.270e-6745.22DNA helicase n=1 Tax=Planctomycetaceae bacterium T... [more]
UPI0019C4A5152.240e-6744.24UvrD-helicase domain-containing protein n=1 Tax=Pl... [more]
A0A2E3MLD6_9PLAN1.650e-6644.44DNA helicase n=1 Tax=Planctomycetaceae bacterium T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86714contigM-pyrifera_M_contig86714:3..842 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score213.8
Seed ortholog evalue1e-52
Seed eggNOG ortholog530564.Psta_2269
Preferred nameaddA
KEGG koko:K16898
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the helicase family. UvrD subfamily
EggNOG OGs2IX1B@203682,COG1074@1,COG1074@2
EC3.6.4.12
COG Functional cat.L
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Exons1
Model size840
Cds size840
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816776.5177255-CDS-M-pyrifera_M_contig86714:2..8421622816776.5177255-CDS-M-pyrifera_M_contig86714:2..842Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86714 3..842 +
1692278171.8596373-CDS-M-pyrifera_M_contig86714:2..8421692278171.8596373-CDS-M-pyrifera_M_contig86714:2..842Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86714 3..842 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86714.20170.1prot_M-pyrifera_M_contig86714.20170.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86714 3..842 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86714.20170.1

>prot_M-pyrifera_M_contig86714.20170.1 ID=prot_M-pyrifera_M_contig86714.20170.1|Name=mRNA_M-pyrifera_M_contig86714.20170.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp
KQAILRAAAERVANIAGDTSWASVGVLLRTHDEIAEVMNHLRRLGVPACE
VGGNRVVDAAGVLVVMSLLQLADHPGHTVARFHVVNSPLADQLSFHRHDD
DVAATLLAADVRQSLVESGYGPTLDEWANTLLPFCSKRERLRLGQLVELG
YRYDTVPTLRPRDFITSVEAEKFVDPSPELVQVMTFHAAKGLQFDVVVVP
LVERNLTGIPSRFFVGRADPTAPIERVCLQRNEHIHALLPAEMQADLQRS
TDNSVRETLCRLYVAVTRPVHAMHIVVPPS
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mRNA from alignment at M-pyrifera_M_contig86714:3..842+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86714.20170.1 ID=mRNA_M-pyrifera_M_contig86714.20170.1|Name=mRNA_M-pyrifera_M_contig86714.20170.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig86714:3..842+ (Macrocystis pyrifera P11B4 male)
AAGCAAGCCATTTTGAGAGCAGCCGCAGAACGGGTCGCCAACATCGCGGG CGACACTTCCTGGGCGTCGGTGGGAGTTCTGCTACGAACTCATGACGAGA TCGCTGAGGTGATGAACCATCTCAGGCGACTCGGCGTGCCCGCCTGTGAA GTTGGCGGGAATCGGGTTGTGGATGCAGCGGGCGTACTCGTCGTGATGTC ACTTCTGCAATTGGCCGACCATCCTGGTCATACGGTGGCCCGCTTCCATG TGGTGAATTCACCACTGGCAGACCAATTGTCGTTTCATCGTCATGACGAC GATGTTGCGGCCACCCTGCTGGCAGCAGACGTACGACAGTCGCTGGTCGA ATCAGGTTATGGTCCAACACTTGACGAGTGGGCGAACACTCTGCTGCCGT TCTGTTCAAAGCGGGAACGATTGCGGCTGGGTCAACTCGTCGAGTTGGGA TACCGGTACGACACAGTTCCGACCCTGCGTCCACGCGATTTCATCACCTC CGTTGAGGCGGAAAAGTTCGTCGACCCGTCCCCGGAGTTGGTCCAGGTGA TGACGTTTCATGCAGCCAAGGGACTGCAGTTTGACGTCGTCGTGGTCCCA TTAGTCGAACGAAACCTGACCGGAATTCCGTCCAGGTTCTTCGTAGGGCG AGCCGATCCGACTGCACCAATTGAACGTGTCTGCCTGCAGCGGAACGAGC ACATCCATGCCCTTCTTCCAGCAGAAATGCAAGCCGACTTGCAGCGATCC ACCGACAACAGTGTCCGCGAGACATTGTGTCGTCTCTACGTTGCGGTCAC TCGACCGGTGCACGCAATGCACATCGTCGTGCCTCCGTCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86714:3..842+

>mRNA_M-pyrifera_M_contig86714.20170.1 ID=mRNA_M-pyrifera_M_contig86714.20170.1|Name=mRNA_M-pyrifera_M_contig86714.20170.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig86714:3..842+ (Macrocystis pyrifera P11B4 male)
AAGCAAGCCATTTTGAGAGCAGCCGCAGAACGGGTCGCCAACATCGCGGG
CGACACTTCCTGGGCGTCGGTGGGAGTTCTGCTACGAACTCATGACGAGA
TCGCTGAGGTGATGAACCATCTCAGGCGACTCGGCGTGCCCGCCTGTGAA
GTTGGCGGGAATCGGGTTGTGGATGCAGCGGGCGTACTCGTCGTGATGTC
ACTTCTGCAATTGGCCGACCATCCTGGTCATACGGTGGCCCGCTTCCATG
TGGTGAATTCACCACTGGCAGACCAATTGTCGTTTCATCGTCATGACGAC
GATGTTGCGGCCACCCTGCTGGCAGCAGACGTACGACAGTCGCTGGTCGA
ATCAGGTTATGGTCCAACACTTGACGAGTGGGCGAACACTCTGCTGCCGT
TCTGTTCAAAGCGGGAACGATTGCGGCTGGGTCAACTCGTCGAGTTGGGA
TACCGGTACGACACAGTTCCGACCCTGCGTCCACGCGATTTCATCACCTC
CGTTGAGGCGGAAAAGTTCGTCGACCCGTCCCCGGAGTTGGTCCAGGTGA
TGACGTTTCATGCAGCCAAGGGACTGCAGTTTGACGTCGTCGTGGTCCCA
TTAGTCGAACGAAACCTGACCGGAATTCCGTCCAGGTTCTTCGTAGGGCG
AGCCGATCCGACTGCACCAATTGAACGTGTCTGCCTGCAGCGGAACGAGC
ACATCCATGCCCTTCTTCCAGCAGAAATGCAAGCCGACTTGCAGCGATCC
ACCGACAACAGTGTCCGCGAGACATTGTGTCGTCTCTACGTTGCGGTCAC
TCGACCGGTGCACGCAATGCACATCGTCGTGCCTCCGTCAAAGCAAGCCA
TTTTGAGAGCAGCCGCAGAACGGGTCGCCAACATCGCGGGCGACACTTCC
TGGGCGTCGGTGGGAGTTCTGCTACGAACTCATGACGAGATCGCTGAGGT
GATGAACCATCTCAGGCGACTCGGCGTGCCCGCCTGTGAAGTTGGCGGGA
ATCGGGTTGTGGATGCAGCGGGCGTACTCGTCGTGATGTCACTTCTGCAA
TTGGCCGACCATCCTGGTCATACGGTGGCCCGCTTCCATGTGGTGAATTC
ACCACTGGCAGACCAATTGTCGTTTCATCGTCATGACGACGATGTTGCGG
CCACCCTGCTGGCAGCAGACGTACGACAGTCGCTGGTCGAATCAGGTTAT
GGTCCAACACTTGACGAGTGGGCGAACACTCTGCTGCCGTTCTGTTCAAA
GCGGGAACGATTGCGGCTGGGTCAACTCGTCGAGTTGGGATACCGGTACG
ACACAGTTCCGACCCTGCGTCCACGCGATTTCATCACCTCCGTTGAGGCG
GAAAAGTTCGTCGACCCGTCCCCGGAGTTGGTCCAGGTGATGACGTTTCA
TGCAGCCAAGGGACTGCAGTTTGACGTCGTCGTGGTCCCATTAGTCGAAC
GAAACCTGACCGGAATTCCGTCCAGGTTCTTCGTAGGGCGAGCCGATCCG
ACTGCACCAATTGAACGTGTCTGCCTGCAGCGGAACGAGCACATCCATGC
CCTTCTTCCAGCAGAAATGCAAGCCGACTTGCAGCGATCCACCGACAACA
GTGTCCGCGAGACATTGTGTCGTCTCTACGTTGCGGTCACTCGACCGGTG
CACGCAATGCACATCGTCGTGCCTCCGTCA
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