mRNA_M-pyrifera_M_contig86439.20124.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Match: A0A517PL93_9PLAN (Inner membrane transport protein YnfM n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517PL93_9PLAN) HSP 1 Score: 482 bits (1240), Expect = 2.400e-169 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1 Query: 1 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTATFYWLLTIRRNRV 729 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTATFYWLLTIRRNRV Sbjct: 169 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTATFYWLLTIRRNRV 411
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Match: A0A517Q7R0_9PLAN (Inner membrane transport protein YnfM n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q7R0_9PLAN) HSP 1 Score: 457 bits (1175), Expect = 6.500e-160 Identity = 226/243 (93.00%), Postives = 237/243 (97.53%), Query Frame = 1 Query: 1 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTATFYWLLTIRRNRV 729 SRT+SGVLGRLIDWQSIYY+A+ ML CLLALLWY+LPSTKPQIRMGY+PLLTSMWKLFTSEKVLRESCVFGSLSFAAFS FWMT+VFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRL+DRFGARPIIGLFQLFTLFSFGILYF GETL+GLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGG+LGAAVGVWSWTEFGWAGVCS+SALFMLTAT YWLLT RRNR+ Sbjct: 139 SRTVSGVLGRLIDWQSIYYLASGMLACLLALLWYSLPSTKPQIRMGYLPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSTFWMTIVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLTDRFGARPIIGLFQLFTLFSFGILYFYGETLIGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGSLGAAVGVWSWTEFGWAGVCSASALFMLTATIYWLLTHRRNRI 381
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Match: A0A517VD12_9PLAN (Inner membrane transport protein YnfM n=11 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VD12_9PLAN) HSP 1 Score: 375 bits (963), Expect = 2.980e-127 Identity = 186/239 (77.82%), Postives = 205/239 (85.77%), Query Frame = 1 Query: 4 RTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTATFYWLLTIRR 720 RTISG LG+LIDWQSIY+IAA ML CL LLW LPST PQI M Y LLTSMWK+F SE VLRESC+FGS+S AAF AFWMTL FHLERPPLNYGSDV GMLGLLAIGGA+AAG GRL+DRFGARPIIGLFQLFTL SFGI Y GE+LLGLGIGVV+MDLGIQAVHVGNQSR+YSL+PE RNRLGTIYIV YFAGG+LGAA VWSWT +GW+GVC+ SALF++ +T YW T+RR Sbjct: 170 RTISGFLGKLIDWQSIYFIAAGMLVCLFILLWRYLPSTTPQIHMPYFRLLTSMWKIFRSEPVLRESCLFGSMSMAAFCAFWMTLAFHLERPPLNYGSDVTGMLGLLAIGGAIAAGITGRLADRFGARPIIGLFQLFTLSSFGIFYLWGESLLGLGIGVVVMDLGIQAVHVGNQSRIYSLAPEERNRLGTIYIVTYFAGGSLGAAGSVWSWTHYGWSGVCAISALFLVVSTLYWGFTVRR 408
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Match: UPI001CCB4A3A (MFS transporter n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCB4A3A) HSP 1 Score: 264 bits (674), Expect = 2.570e-83 Identity = 134/230 (58.26%), Postives = 169/230 (73.48%), Query Frame = 1 Query: 1 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTA 690 SR +SG+LG + W+ +YY+AA ML+ L LLW LP + PQ R+ Y LL SM L +E VLR +CV+GS SFA F AFW+TL FHLE+PP+ YGSDVAGMLGLLAI GA+AAG VG+L+D+ GA I G L T SF + G +L L IGV+LMDLG+QAVHV NQSR+YSL PEARNRLG +Y+V YF GG++G+A+GVW+WT +GW GVC S++ F+ A Sbjct: 168 SRALSGLLGSIWGWRPVYYLAAGMLSVLFLLLWVKLPKSAPQSRLTYPQLLQSMGTLLRNEPVLRAACVYGSASFAGFGAFWVTLAFHLEQPPMEYGSDVAGMLGLLAIVGAIAAGPVGKLADKVGAVYIQGPSLLLTFVSFVGMGLWGTSLWVLAIGVILMDLGMQAVHVCNQSRIYSLIPEARNRLGAVYVVTYFLGGSVGSAIGVWAWTRWGWTGVCFSASTFLFIA 397
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Match: A0A368KR68_9BACT (MFS transporter n=2 Tax=Blastopirellula TaxID=265487 RepID=A0A368KR68_9BACT) HSP 1 Score: 261 bits (667), Expect = 1.840e-82 Identity = 127/227 (55.95%), Postives = 165/227 (72.69%), Query Frame = 1 Query: 1 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFM 681 SRT+SG++G W+ +YY+ A +LT L LLW LP++ PQ +M Y LL SM L ++ VLR SC +G+ +FA+F+AFW+TL FHLERPPL GSDV GMLGLL + GAL AG VG+L+D +GA+ I+ L T SF I G +L L GV++MDLGIQA+ V NQ+++YSL PEARNRLGTIYIV+YF GG +G+AVGVW+W+ FGW GVC+S +FM Sbjct: 168 SRTVSGMIGSAWGWRPVYYVGASVLTVLFFLLWVKLPNSVPQSQMSYPRLLWSMVNLLRTQPVLRLSCAYGAAAFASFNAFWITLAFHLERPPLEQGSDVVGMLGLLGVVGALIAGPVGKLADMYGAQRILATSMLLTFVSFAIFGLGGYSLWALSFGVIVMDLGIQAIQVSNQAQIYSLIPEARNRLGTIYIVVYFLGGTIGSAVGVWAWSRFGWLGVCTSGGIFM 394
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Match: A0A2S8FV70_9BACT (MFS transporter n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FV70_9BACT) HSP 1 Score: 251 bits (642), Expect = 1.190e-78 Identity = 128/235 (54.47%), Postives = 165/235 (70.21%), Query Frame = 1 Query: 1 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTATFYWL 705 SRTISGVLG W+ +YY A +LT L LL+ LP++ PQ +M Y LL SM L ++ +LR SC +G+ +FA+F+AFW+TL FHLE+PPL GSDV GMLGLL + GAL AG VG+L+D +G + I+ + T SF I F +L + GV++MDLGIQA V NQ+++YSL PEARNRLGTIYIVIYF GG++G+AVGVW+W+EFGW GVC S FM A +L Sbjct: 168 SRTISGVLGSAWGWRPVYYFGASVLTVLFFLLYVKLPNSIPQSQMSYPRLLWSMVDLLRAQPILRLSCAYGAAAFASFNAFWVTLAFHLEQPPLEQGSDVVGMLGLLGVVGALIAGPVGKLADSYGPQRILFSSMVLTFVSFAIFGFGATSLWAISFGVIVMDLGIQATQVSNQAQIYSLIPEARNRLGTIYIVIYFLGGSIGSAVGVWAWSEFGWTGVCVSGGAFMGLALLVYL 402
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Match: D6TKZ7_9CHLR (Major facilitator superfamily MFS_1 n=5 Tax=Ktedonobacter TaxID=363276 RepID=D6TKZ7_9CHLR) HSP 1 Score: 232 bits (592), Expect = 4.070e-71 Identity = 120/242 (49.59%), Postives = 162/242 (66.94%), Query Frame = 1 Query: 1 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTATFYWLLTIRRNR 726 +RT SGVL + W+++Y+IAA ++ L +L + LP +PQ M Y LL S+W L SE VLRE+ V+G+L FAAFSAFW TL F L+ PP +YGS+VAG+ GL+ + GALAA +GRL+D+ R IG+ L L SFGI + G+ L GL IGV+L+DLG QA + NQ+RVYSL+P AR+RL TIY+V YF GG+ G+ +G + W GW GVC L +L A ++L RR + Sbjct: 173 ARTASGVLSAHLGWRAVYWIAAGLMVLLALVLRFLLPPDRPQSDMSYTQLLRSLWSLVKSEPVLRETSVYGALGFAAFSAFWATLSFRLQTPPFHYGSEVAGLFGLVGVVGALAASFIGRLADKVNPRKTIGIGLLILLASFGIFWLMGQYLWGLIIGVILLDLGAQANQISNQARVYSLNPAARSRLNTIYMVSYFIGGSFGSFLGTYGWGFAGWFGVCGVGLLLLLLALAVYVLNSRRTQ 414
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Match: A0A8J3MNR7_9CHLR (Permease n=1 Tax=Ktedonospora formicarum TaxID=2778364 RepID=A0A8J3MNR7_9CHLR) HSP 1 Score: 228 bits (582), Expect = 9.050e-70 Identity = 115/240 (47.92%), Postives = 167/240 (69.58%), Query Frame = 1 Query: 1 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTATFYWLLTIRR 720 +RT+SGV+ + W+++Y+IAA ++ L +L + LP +P+ M Y LL S+W L SE LRE+CVFG++ FA+FSAFW TL F L+ PP +YGS+VAG+ GL+ A+AA VGRL+D+ AR +G+ L L SFGI + G+ + GL IGV+L+DLG Q+ V NQ+R+YSL+PEAR+RL TIY+V YF GG+LG+ +G + W+ GW+GVC+ S L + A +++ +RR Sbjct: 162 ARTVSGVVCANLGWRAMYWIAAGLMVLLALVLRFLLPPDRPRSDMSYPQLLRSLWSLLRSEPGLRETCVFGAMGFASFSAFWATLSFLLQTPPYHYGSEVAGLFGLVXXXXAVAASFVGRLADKMEARKTVGIALLVLLLSFGIFWLTGQFIWGLIIGVILLDLGAQSNQVSNQTRIYSLNPEARSRLNTIYMVSYFIGGSLGSFLGTYGWSIAGWSGVCAVSLLLITVAGIAYVINMRR 401
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Match: A0A7V7ZNR7_9CHLR (MFS transporter n=1 Tax=Chloroflexia bacterium SDU3-3 TaxID=2651839 RepID=A0A7V7ZNR7_9CHLR) HSP 1 Score: 228 bits (581), Expect = 1.180e-69 Identity = 114/240 (47.50%), Postives = 157/240 (65.42%), Query Frame = 1 Query: 1 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTATFYWLLTIRR 720 +RT SG++G + W++I++IAA M+ L L ALP + + Y LL SMW++ + LRE+ FG+L F FSAFW+TL FHL+ P +YGSDVAG+ GL+ + GA+AA GRLSDR AR I G+ L SFG+ + G+ L GL +GV+L+DLG+Q H+ NQ+RVY+L+P AR+RL + YIVIYF GG+LG+A+ +W GWAGVC+ F A WL +RR Sbjct: 160 ARTASGLVGAALGWRAIFWIAAGMMVLLALALRLALPDDPARAGLRYGQLLASMWQMLRTMPALREAAAFGALVFGCFSAFWVTLAFHLQTPSYHYGSDVAGLFGLVGVAGAMAATFAGRLSDRMPARRITGIGIALVLVSFGVFWLLGDQLWGLALGVILLDLGVQGAHISNQTRVYALNPAARSRLNSAYIVIYFLGGSLGSALASAAWASLGWAGVCALGGGFAALALLIWLAGVRR 399
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Match: A0A8J3IFM8_9CHLR (Major facilitator transporter n=1 Tax=Reticulibacter mediterranei TaxID=2778369 RepID=A0A8J3IFM8_9CHLR) HSP 1 Score: 223 bits (567), Expect = 1.990e-67 Identity = 110/243 (45.27%), Postives = 160/243 (65.84%), Query Frame = 1 Query: 1 SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLLTSMWKLFTSEKVLRESCVFGSLSFAAFSAFWMTLVFHLERPPLNYGSDVAGMLGLLAIGGALAAGGVGRLSDRFGARPIIGLFQLFTLFSFGILYFQGETLLGLGIGVVLMDLGIQAVHVGNQSRVYSLSPEARNRLGTIYIVIYFAGGALGAAVGVWSWTEFGWAGVCSSSALFMLTATFYWLLTIRRNRV 729 +RT SG + + WQ++Y+IAA M+ L ++ +ALP+ +P+ M Y LL S+W+L E VLRE+ V G L F AFSAFW+ L F LE PP +YGSDVAG+ GL+ + GALAA VGRL+D+ +R G+ + SF + + G L GL IGV+L+DLG+Q++ V NQ+RVYSL+P RNRL ++Y+V YF GG+LG+ +G + W+ GW GVC+ + ++ A + + RR + Sbjct: 168 ARTASGFISAHLGWQAVYWIAAAMMVALAVVMRFALPADRPRSSMSYPRLLHSLWQLARREPVLRETSVIGGLVFGAFSAFWVVLAFFLETPPYHYGSDVAGLFGLVGVAGALAASFVGRLADKMDSRRTTGIAVGVVVVSFALFWLTGHYLWGLIIGVILLDLGMQSIQVSNQTRVYSLNPHERNRLNSVYMVSYFIGGSLGSLLGSYGWSIAGWTGVCAVGGILLVAALGIYAVNSRRKAI 410 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86439.20124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86439.20124.1 >prot_M-pyrifera_M_contig86439.20124.1 ID=prot_M-pyrifera_M_contig86439.20124.1|Name=mRNA_M-pyrifera_M_contig86439.20124.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp SRTISGVLGRLIDWQSIYYIAACMLTCLLALLWYALPSTKPQIRMGYIPLback to top mRNA from alignment at M-pyrifera_M_contig86439:2..733+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86439.20124.1 ID=mRNA_M-pyrifera_M_contig86439.20124.1|Name=mRNA_M-pyrifera_M_contig86439.20124.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig86439:2..733+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86439:2..733+ >mRNA_M-pyrifera_M_contig86439.20124.1 ID=mRNA_M-pyrifera_M_contig86439.20124.1|Name=mRNA_M-pyrifera_M_contig86439.20124.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1464bp|location=Sequence derived from alignment at M-pyrifera_M_contig86439:2..733+ (Macrocystis pyrifera P11B4 male)back to top |