mRNA_M-pyrifera_M_contig86100.20068.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86100.20068.1
Unique NamemRNA_M-pyrifera_M_contig86100.20068.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Match: A0A7S4IGK0_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IGK0_9EUKA)

HSP 1 Score: 237 bits (605), Expect = 6.670e-70
Identity = 123/234 (52.56%), Postives = 165/234 (70.51%), Query Frame = 1
Query:    1 VKVVVNGDRGVGKSCMIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIRTLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVDLRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRETFETALRTVIA--HTKAQKKQKVKRQKREKALPQPPVMPPAGKAP*INVETSTYAAALLRLMKDAVGQDV 696
            +K+VV GD  VGKSC++++YT N+FP +Y+PTV D+Y          ++L LWDTAGQE Y R+R LSYP TDVFLVCFS+V+ +SFEN+ + WVPEI+HH P A +ILVG K DL  D+ +L  L ++G+ PIT  Q   +  + G   Y + SALTQ+GL+  F+ A+R+VIA    KA KK+K +R+K EK+ PQPPVMPPAGKAP INVETS++   L ++ KD +  DV
Sbjct:    4 IKLVVLGDGAVGKSCLLISYTTNAFPGDYVPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSLVSPSSFENISSKWVPEIQHHCPGANMILVGLKSDLLSDSNSLSRLEEKGLSPITTQQAEKVVKSCGFQGYYQCSALTQQGLKTVFDEAIRSVIAPLDKKAMKKRK-ERKKIEKSKPQPPVMPPAGKAPWINVETSSFGEDLAKMYKDNLECDV 236          
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Match: A0A1B3SNZ7_9STRA (Rac1 n=1 Tax=Eurychasma dicksonii TaxID=159317 RepID=A0A1B3SNZ7_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.350e-66
Identity = 100/176 (56.82%), Postives = 129/176 (73.30%), Query Frame = 1
Query:    1 VKVVVNGDRGVGKSCMIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIRTLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVDLRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRETFETALRTVIAH 528
            +K VV GD  VGK+C++++YT N+FP  YIPTV D+Y          ++L LWDTAGQE Y R+R LSYP TDVFL+CFSVV  ASFENV+A W PEI+HH P    ILVGTK+DLRDD +T++ LR++ + PIT  QG  + + +GAY Y+E SALTQKGL++ F+ A+R VIAH
Sbjct:    4 IKNVVVGDGAVGKTCILISYTTNAFPGEYIPTVFDNYSANVMVDSKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVRPASFENVKAKWYPEIQHHAPGVPFILVGTKLDLRDDEETIERLREKRLSPITPEQGEALRSELGAYKYLECSALTQKGLKQVFDEAIRCVIAH 179          
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Match: A0A485LAI3_9STRA (Aste57867_18068 protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAI3_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.680e-66
Identity = 101/181 (55.80%), Postives = 130/181 (71.82%), Query Frame = 1
Query:    4 KVVVNGDRGVGKSCMIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIRTLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVDLRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRETFETALRTVIAHTKAQKK 546
            K VV GD  VGK+C++++YT N+FP  YIPTV D+Y          V+L LWDTAGQE Y R+R LSYP TDVFL+CFSVV+ ASFENV+A W PEI+HH P    ILVGTK+DLRDD +T++ L+++ +KPIT  QG  + N +GAY Y+E SAL QKGL++ F+  +R V+ H K  KK
Sbjct:    5 KCVVVGDGAVGKTCVLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPASFENVKAKWFPEIQHHAPGIPFILVGTKLDLRDDEETIERLKEKRLKPITTEQGEALKNELGAYKYLECSALNQKGLKQVFDEGIRCVLQHQKNPKK 185          
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Match: A0A6P7INX2_9TELE (ras-related C3 botulinum toxin substrate 1-like n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7INX2_9TELE)

HSP 1 Score: 210 bits (534), Expect = 1.850e-65
Identity = 100/184 (54.35%), Postives = 133/184 (72.28%), Query Frame = 1
Query:    1 VKVVVNGDRGVGKSCMIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIRTLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVDLRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRETFETALRTVIAHTKAQKKQK 552
            +K VV GD  VGK+C++++YT N+FP  YIPTV D+Y          V+L LWDTAGQE Y R+R LSYP TDVFL+CFS+V+ ASFENVRA W PE++HH P+  IILVGTK+DLRDD  T++ L+++ + PIT  QG  MA  +G+  Y+E SALTQ+GL+  F+ A+R V+    A+KK+K
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLSPITYPQGLSMAKEIGSVKYLECSALTQRGLKTVFDEAIRAVLCPPPAKKKRK 187          
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Match: B4KB97_DROMO (Uncharacterized protein n=9 Tax=Drosophilinae TaxID=43845 RepID=B4KB97_DROMO)

HSP 1 Score: 210 bits (534), Expect = 2.040e-65
Identity = 99/174 (56.90%), Postives = 128/174 (73.56%), Query Frame = 1
Query:    1 VKVVVNGDRGVGKSCMIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIRTLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVDLRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRETFETALRTVI 522
            +K VV GD  VGK+CM+++YT +SFP  Y+PTV D+Y    Q     VSL LWDTAGQE Y R+R LSYP TDVFL+C+SV + +SFENV + W PEIKHH PDA IILVGTK+DLRDD +TL  L ++G+ P+   QG+ +AN + A  Y+E SALTQ+GL++ FE A+R V+
Sbjct:    7 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLRDDRETLSGLAEQGLTPLKREQGQKLANKIRAVKYMECSALTQRGLKQVFEEAVRAVL 180          
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Match: W8AQG8_CERCA (Ras-related protein Rac1 n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8AQG8_CERCA)

HSP 1 Score: 209 bits (533), Expect = 2.980e-65
Identity = 97/173 (56.07%), Postives = 128/173 (73.99%), Query Frame = 1
Query:    4 KVVVNGDRGVGKSCMIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIRTLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVDLRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRETFETALRTVI 522
            K+ + GD  VGK+C+++TYT+N FP  YIPTV D++ C         +L+LWDTAGQE Y R+R LSYP TDVFL+CFS+VN ASFENVRA W PE++HH P+  IILVGTK+DLRDD  T++ L+++ + PIT  QG  MA  +GA  Y+E SALTQKGL+  F+ A+R+V+
Sbjct:    9 KITIVGDGMVGKTCLLITYTQNEFPEEYIPTVFDNHACNITVDGNEYNLTLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPNVPIILVGTKLDLRDDKATIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVL 181          
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Match: Q16V02_AEDAE (AAEL009732-PA n=22 Tax=Diptera TaxID=7147 RepID=Q16V02_AEDAE)

HSP 1 Score: 209 bits (532), Expect = 3.720e-65
Identity = 99/174 (56.90%), Postives = 127/174 (72.99%), Query Frame = 1
Query:    1 VKVVVNGDRGVGKSCMIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIRTLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVDLRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRETFETALRTVI 522
            +K VV GD  VGK+C++++YT N+FP  YIPTV D+Y          ++L LWDTAGQE Y R+R LSYP TDVFL+CFS+VN ASFENVRA W PE++HH P+  IILVGTK+DLRDD +T+  LR++ + PIT  QG  MA  +GA  Y+E SALTQKGL+  F+ A+R V+
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPNIPIILVGTKLDLRDDKQTVDKLREKKLSPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 177          
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Match: C3YND5_BRAFL (Uncharacterized protein n=10 Tax=Opisthokonta TaxID=33154 RepID=C3YND5_BRAFL)

HSP 1 Score: 209 bits (532), Expect = 3.720e-65
Identity = 100/184 (54.35%), Postives = 131/184 (71.20%), Query Frame = 1
Query:    1 VKVVVNGDRGVGKSCMIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIRTLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVDLRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRETFETALRTVIAHTKAQKKQK 552
            +K VV GD  VGK+C++++YT N+FP  YIPTV D+Y          ++L LWDTAGQE Y R+R LSYP TDVFL+CFS+++ ASFENVRA W PE+ HH P+  IILVGTK+DLRDD +T+  L+++ + PIT  QG  M   +GA  Y+E SALTQKGL+  F+ A+R V+  TK  KK+K
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLISPASFENVRAKWHPEVSHHCPNTPIILVGTKLDLRDDKETIDKLQEKRLAPITYPQGLQMMKDIGAVKYLECSALTQKGLKTVFDEAIRAVLCPTKVPKKKK 187          
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Match: T1L088_TETUR (Uncharacterized protein n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1L088_TETUR)

HSP 1 Score: 209 bits (532), Expect = 3.720e-65
Identity = 99/174 (56.90%), Postives = 126/174 (72.41%), Query Frame = 1
Query:    1 VKVVVNGDRGVGKSCMIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIRTLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVDLRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRETFETALRTVI 522
            +K VV GD  VGK+C++++YT N+FP  YIPTV D+Y          ++L LWDTAGQE Y R+R LSYP TDVFL+CFS+VN ASFENVRA W PE+ HH P+  IILVGTK+DLRDDAKT++ L++  + PIT  Q   MA  +GA  Y+E SALTQKGL+  F+ A+R V+
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVSHHSPNTPIILVGTKLDLRDDAKTIEKLKERKLAPITYPQALTMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVL 177          
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Match: UPI001425930D (ras-related C3 botulinum toxin substrate 1 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425930D)

HSP 1 Score: 209 bits (532), Expect = 3.970e-65
Identity = 102/186 (54.84%), Postives = 130/186 (69.89%), Query Frame = 1
Query:    1 VKVVVNGDRGVGKSCMIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIRTLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVDLRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRETFETALRTVIAHTKAQKKQKVK 558
            +K VV GD  VGK+C++++YT N+FP  YIPTV D+Y          V+L LWDTAGQE Y R+R LSYP TDVFL+CFS+++ ASFENVRA W PE++HH P   IILVGTK+DLRDD  TL+ LR+  ++PIT  QG  MA  + A  Y+E SALTQKGL+  F+ A+R V+   K  KK+  K
Sbjct:    5 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLISPASFENVRAKWYPEVRHHCPQTPIILVGTKLDLRDDKDTLERLRERNLQPITFPQGLQMAKEITAMKYLECSALTQKGLKTVFDEAIRAVLCPPKMPKKKSPK 190          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86100.20068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4IGK0_9EUKA6.670e-7052.56Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A1B3SNZ7_9STRA2.350e-6656.82Rac1 n=1 Tax=Eurychasma dicksonii TaxID=159317 Rep... [more]
A0A485LAI3_9STRA2.680e-6655.80Aste57867_18068 protein n=6 Tax=Aphanomyces TaxID=... [more]
A0A6P7INX2_9TELE1.850e-6554.35ras-related C3 botulinum toxin substrate 1-like n=... [more]
B4KB97_DROMO2.040e-6556.90Uncharacterized protein n=9 Tax=Drosophilinae TaxI... [more]
W8AQG8_CERCA2.980e-6556.07Ras-related protein Rac1 n=1 Tax=Ceratitis capitat... [more]
Q16V02_AEDAE3.720e-6556.90AAEL009732-PA n=22 Tax=Diptera TaxID=7147 RepID=Q1... [more]
C3YND5_BRAFL3.720e-6554.35Uncharacterized protein n=10 Tax=Opisthokonta TaxI... [more]
T1L088_TETUR3.720e-6556.90Uncharacterized protein n=1 Tax=Tetranychus urtica... [more]
UPI001425930D3.970e-6554.84ras-related C3 botulinum toxin substrate 1 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86100contigM-pyrifera_M_contig86100:41..837 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.8
Seed ortholog evalue9.1e-48
Seed eggNOG ortholog157072.XP_008877572.1
KEGG koko:K04392,ko:K07975
KEGG Pathwayko04010,ko04013,ko04014,ko04015,ko04024,ko04062,ko04071,ko04145,ko04151,ko04310,ko04360,ko04370,ko04380,ko04510,ko04520,ko04530,ko04620,ko04650,ko04662,ko04664,ko04666,ko04670,ko04722,ko04810,ko04932,ko04933,ko04972,ko05014,ko05100,ko05120,ko05131,ko05132,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05231,ko05416,ko05418,map04010,map04013,map04014,map04015,map04024,map04062,map04071,map04145,map04151,map04310,map04360,map04370,map04380,map04510,map04520,map04530,map04620,map04650,map04662,map04664,map04666,map04670,map04722,map04810,map04932,map04933,map04972,map05014,map05100,map05120,map05131,map05132,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05231,map05416,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464
EggNOG free text desc.GTP binding
EggNOG OGsCOG1100@1,KOG0393@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Exons3
Model size702
Cds size579
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86100.20068.1prot_M-pyrifera_M_contig86100.20068.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86100 86..759 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816771.5817995-UTR-M-pyrifera_M_contig86100:40..851622816771.5817995-UTR-M-pyrifera_M_contig86100:40..85Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86100 41..85 +
1692278169.048659-UTR-M-pyrifera_M_contig86100:40..851692278169.048659-UTR-M-pyrifera_M_contig86100:40..85Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86100 41..85 +
1622816771.631561-UTR-M-pyrifera_M_contig86100:759..8371622816771.631561-UTR-M-pyrifera_M_contig86100:759..837Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86100 760..837 +
1692278169.104592-UTR-M-pyrifera_M_contig86100:759..8371692278169.104592-UTR-M-pyrifera_M_contig86100:759..837Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86100 760..837 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816771.5934033-CDS-M-pyrifera_M_contig86100:85..1431622816771.5934033-CDS-M-pyrifera_M_contig86100:85..143Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86100 86..143 +
1692278169.0697863-CDS-M-pyrifera_M_contig86100:85..1431692278169.0697863-CDS-M-pyrifera_M_contig86100:85..143Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86100 86..143 +
1622816771.6064487-CDS-M-pyrifera_M_contig86100:191..2651622816771.6064487-CDS-M-pyrifera_M_contig86100:191..265Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86100 192..265 +
1692278169.0804055-CDS-M-pyrifera_M_contig86100:191..2651692278169.0804055-CDS-M-pyrifera_M_contig86100:191..265Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86100 192..265 +
1622816771.6186428-CDS-M-pyrifera_M_contig86100:312..7591622816771.6186428-CDS-M-pyrifera_M_contig86100:312..759Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86100 313..759 +
1692278169.0919518-CDS-M-pyrifera_M_contig86100:312..7591692278169.0919518-CDS-M-pyrifera_M_contig86100:312..759Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86100 313..759 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86100.20068.1

>prot_M-pyrifera_M_contig86100.20068.1 ID=prot_M-pyrifera_M_contig86100.20068.1|Name=mRNA_M-pyrifera_M_contig86100.20068.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
MIVTYTENSFPRNYIPTVLDSYWCEQQFGDTAVSLSLWDTAGQEGYSRIR
TLSYPCTDVFLVCFSVVNLASFENVRANWVPEIKHHVPDAAIILVGTKVD
LRDDAKTLQDLRQEGMKPITAAQGRDMANAVGAYTYVENSALTQKGLRET
FETALRTVIAHTKAQKKQKVKRQKREKALPQPPVMPPAGKAP*
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mRNA from alignment at M-pyrifera_M_contig86100:41..837+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86100.20068.1 ID=mRNA_M-pyrifera_M_contig86100.20068.1|Name=mRNA_M-pyrifera_M_contig86100.20068.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=797bp|location=Sequence derived from alignment at M-pyrifera_M_contig86100:41..837+ (Macrocystis pyrifera P11B4 male)
GTGAAAGTTGTGGTGAATGGTGACAGAGGAGTGGGCAAGAGTTGCATGAT CGTCACGTACACTGAGAATTCCTTCCCAAGGAACTATATTCCCACCGTGC TTGGTACGCAACTGCCGTGGCTCTTGTGCCACCATTGCTGACACTATCCA GACAGCTATTGGTGTGAACAACAGTTCGGGGACACTGCGGTCTCCCTCAG CCTCTGGGACACTGCTGGGCAAGAGGTATGTCATCCCTGAAAGACCTCTA GGTCATGAGACTGACCTTACAGGGATACTCCCGGATAAGGACACTGTCGT ACCCGTGCACTGATGTGTTCCTCGTCTGCTTCAGCGTCGTCAACCTAGCC TCCTTCGAGAACGTACGAGCCAACTGGGTTCCTGAGATCAAGCACCACGT CCCAGACGCGGCAATCATCCTCGTGGGCACGAAGGTGGACCTCAGAGATG ATGCGAAGACACTGCAAGACCTGAGGCAGGAGGGCATGAAGCCAATCACT GCTGCGCAAGGAAGAGACATGGCTAATGCCGTGGGAGCGTACACCTATGT TGAGAACTCTGCTTTGACGCAGAAGGGCCTGAGGGAGACATTTGAAACCG CATTGAGGACTGTCATAGCGCATACTAAGGCGCAGAAGAAGCAAAAGGTG AAGAGACAGAAGAGAGAAAAGGCACTCCCCCAGCCTCCCGTCATGCCGCC TGCAGGAAAGGCGCCGTAGATCAACGTCGAGACCTCCACCTATGCGGCGG CACTCCTGCGCTTGATGAAGGACGCCGTAGGCCAGGACGTGGCCTTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86100:41..837+

>mRNA_M-pyrifera_M_contig86100.20068.1 ID=mRNA_M-pyrifera_M_contig86100.20068.1|Name=mRNA_M-pyrifera_M_contig86100.20068.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig86100:41..837+ (Macrocystis pyrifera P11B4 male)
ATGATCGTCACGTACACTGAGAATTCCTTCCCAAGGAACTATATTCCCAC
CGTGCTTGATGATCGTCACGTACACTGAGAATTCCTTCCCAAGGAACTAT
ATTCCCACCGTGCTTGACAGCTATTGGTGTGAACAACAGTTCGGGGACAC
TGCGGTCTCCCTCAGCCTCTGGGACACTGCTGGGCAAGAGACAGCTATTG
GTGTGAACAACAGTTCGGGGACACTGCGGTCTCCCTCAGCCTCTGGGACA
CTGCTGGGCAAGAGGGATACTCCCGGATAAGGACACTGTCGTACCCGTGC
ACTGATGTGTTCCTCGTCTGCTTCAGCGTCGTCAACCTAGCCTCCTTCGA
GAACGTACGAGCCAACTGGGTTCCTGAGATCAAGCACCACGTCCCAGACG
CGGCAATCATCCTCGTGGGCACGAAGGTGGACCTCAGAGATGATGCGAAG
ACACTGCAAGACCTGAGGCAGGAGGGCATGAAGCCAATCACTGCTGCGCA
AGGAAGAGACATGGCTAATGCCGTGGGAGCGTACACCTATGTTGAGAACT
CTGCTTTGACGCAGAAGGGCCTGAGGGAGACATTTGAAACCGCATTGAGG
ACTGTCATAGCGCATACTAAGGCGCAGAAGAAGCAAAAGGTGAAGAGACA
GAAGAGAGAAAAGGCACTCCCCCAGCCTCCCGTCATGCCGCCTGCAGGAA
AGGCGCCGTAGGGATACTCCCGGATAAGGACACTGTCGTACCCGTGCACT
GATGTGTTCCTCGTCTGCTTCAGCGTCGTCAACCTAGCCTCCTTCGAGAA
CGTACGAGCCAACTGGGTTCCTGAGATCAAGCACCACGTCCCAGACGCGG
CAATCATCCTCGTGGGCACGAAGGTGGACCTCAGAGATGATGCGAAGACA
CTGCAAGACCTGAGGCAGGAGGGCATGAAGCCAATCACTGCTGCGCAAGG
AAGAGACATGGCTAATGCCGTGGGAGCGTACACCTATGTTGAGAACTCTG
CTTTGACGCAGAAGGGCCTGAGGGAGACATTTGAAACCGCATTGAGGACT
GTCATAGCGCATACTAAGGCGCAGAAGAAGCAAAAGGTGAAGAGACAGAA
GAGAGAAAAGGCACTCCCCCAGCCTCCCGTCATGCCGCCTGCAGGAAAGG
CGCCGTAG
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