mRNA_M-pyrifera_M_contig85995.20043.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85995.20043.1
Unique NamemRNA_M-pyrifera_M_contig85995.20043.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Match: A0A517ZNT4_9PLAN (Probable glycine dehydrogenase (decarboxylating) subunit 1 n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZNT4_9PLAN)

HSP 1 Score: 393 bits (1009), Expect = 4.450e-133
Identity = 196/289 (67.82%), Postives = 234/289 (80.97%), Query Frame = 1
Query:    4 FMAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLEDVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTLGVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLIGQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTLGPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAYDRPFFHEFTLKYEGNATALRDKAAQAGCDIGP---EIDAHT---LLLAVTEQRTQ 852
            FMA RVTGR K++V+LGSVHP+YR VV+TY   LD E V VPT  G ADL  V+ AL+DQT+CLV+Q PN+FGCLED  +L++AAH+VGALA+VS +P +LG+L RPG+YGADIVVAEGQ LG PLQYGGP+LG+ ACR+KF+RKMPGRLIG+  DR+GR C+VL+LQ REQHIRRDKATSNICTNQGL+ALRAT Y++ LG QGL EVA LSC+KAHY AE+LTAIDG +LAYDRP+F EFTL+ E  A    DKAAQAG DIGP   + DA     LL+A TE RT+
Sbjct:  144 FMAMRVTGRYKKVVLLGSVHPEYRAVVDTYFSDLDSEAVVVPTPNGTADLAAVRDALDDQTACLVIQQPNFFGCLEDARELVEAAHEVGALAVVSCDPISLGMLVRPGEYGADIVVAEGQSLGTPLQYGGPFLGILACRQKFMRKMPGRLIGETTDRDGRPCFVLNLQAREQHIRRDKATSNICTNQGLIALRATAYMALLGKQGLGEVAELSCRKAHYVAERLTAIDGFSLAYDRPYFKEFTLRCENGAAEALDKAAQAGFDIGPLLSQFDASNQSDLLVATTECRTR 432          
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Match: A0A3E0PVK5_9BACT (Probable glycine dehydrogenase (decarboxylating) subunit 1 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PVK5_9BACT)

HSP 1 Score: 386 bits (992), Expect = 1.980e-130
Identity = 187/293 (63.82%), Postives = 228/293 (77.82%), Query Frame = 1
Query:    4 FMAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLEDVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTLGVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLIGQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTLGPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAYDRPFFHEFTLKYEGNATALRDKAAQAGCDIGPEIDAHT----------LLLAVTEQRTQ 852
            FMA RVT R  ++ VLGSVHP+YR V+ETYT  LDCEVV++PT  G  DL     AL+++T+CL++QHPN+FGCLED A L Q AH+VGAL++VS +P +LGVLK PG YGADI VAEGQPLGIPLQYGGPYLG+ A ++ FVRKMPGR++ +A+DR GR CYVL LQTREQHIRR+KATSNICTNQGLLALRATVYLS LGPQGL+E A L C+KAH+AAE+L++ D   L +DRPFF EF L+  G A A RD+A  +G D+GPE+   +          LL+AVTEQRT+
Sbjct:  144 FMAMRVTNRHTKVAVLGSVHPEYRQVLETYTGNLDCEVVTIPTPDGTCDLNRAAEALDERTACLIVQHPNFFGCLEDAAKLTQIAHEVGALSVVSFDPISLGVLKNPGSYGADIAVAEGQPLGIPLQYGGPYLGVLASKKDFVRKMPGRIVSEARDREGRACYVLGLQTREQHIRREKATSNICTNQGLLALRATVYLSLLGPQGLREAAELCCRKAHFAAEQLSSSDEFDLMFDRPFFKEFALRCRGGAAAARDRARASGFDVGPELSRFSSMGSAFTDEALLVAVTEQRTR 436          
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Match: A0A517TAN4_9PLAN (Probable glycine dehydrogenase (decarboxylating) subunit 1 n=1 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517TAN4_9PLAN)

HSP 1 Score: 374 bits (960), Expect = 3.000e-125
Identity = 185/296 (62.50%), Postives = 228/296 (77.03%), Query Frame = 1
Query:    4 FMAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLEDVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTLGVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLIGQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTLGPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAYDRPFFHEFTLKYE-GNATALRDKAAQAGCDIGP------------EIDAHTLLLAVTEQRTQ 852
            FMA RVTGRD +++VLGSVHP+YR V+ TY   LD E+V +P   G AD E V+ AL+D+T+C+++QHPN+FGCLE+V  +   A + GAL+++S +P +LGVLK PG+YGADI VAEGQPLG+P+QYGGPYLG+FACRE +VRKMPGRLIG   D+NG TCYVL+LQTREQHIRR KATSNICTNQGLLALRAT+YLS LGP+GLKEV NL  QKAHYAAE++ A DG  L +DRPFF EFT++ E G+A AL+   A +GCD GP            E+     L+AVTEQRT+
Sbjct:  145 FMAMRVTGRDGKVIVLGSVHPEYREVLTTYLSRLDVELVEIPCVEGTADPEQVREALDDRTACVIVQHPNFFGCLEEVETICTLAREFGALSVISFDPLSLGVLKAPGEYGADIAVAEGQPLGVPMQYGGPYLGVFACREDYVRKMPGRLIGVTDDKNGNTCYVLALQTREQHIRRGKATSNICTNQGLLALRATIYLSLLGPEGLKEVGNLCLQKAHYAAEQIAAADGFELQFDRPFFKEFTVRSEHGSAKALQAVRA-SGCDAGPSLSRFGRGGFSNELIEDAFLVAVTEQRTR 439          
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Match: A0A6I6ACF6_9PLAN (Probable glycine dehydrogenase (decarboxylating) subunit 1 n=10 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ACF6_9PLAN)

HSP 1 Score: 372 bits (954), Expect = 1.200e-124
Identity = 181/295 (61.36%), Postives = 227/295 (76.95%), Query Frame = 1
Query:    4 FMAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLEDVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTLGVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLIGQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTLGPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAY-DRPFFHEFTLKYEGNATALRDKAAQAGCDIGPEIDAHT-----------LLLAVTEQRTQ 852
            FMA RVT R  R+V+LGS+HP+YR VVETY ++L+CEVV VP   G  D  DV  A++DQT+CLV+QHPN+FG LE+ A+L + AH  GAL++VS +P +LG+L RPGDYG DI +AEGQ LG PLQ+GGPYLGLF+C EKFVR+MPGRLIGQ  DRNG+ CYVL+LQ REQHIRRDKATSNIC+NQGL+A+RA VYLS LG QG++EVA LSCQKAHYAA++LT+++G+ L + +RPFF EF +     A  L  KA QAG D+GPE+   T           +L+A+TEQRT+
Sbjct:  145 FMAMRVTNRHNRVVLLGSLHPEYRQVVETYLKHLNCEVVIVPCKDGSVDPADVDAAMDDQTACLVIQHPNFFGTLEEAAELTEIAHRYGALSVVSYDPISLGILSRPGDYGTDIAIAEGQSLGTPLQFGGPYLGLFSCSEKFVRRMPGRLIGQTVDRNGKRCYVLNLQAREQHIRRDKATSNICSNQGLIAIRAAVYLSLLGKQGIREVAELSCQKAHYAADQLTSVEGIELLFPERPFFKEFAVSCSEGADYLLRKARQAGFDLGPELSRFTFENNPESYQTAVLVAITEQRTR 439          
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Match: A0A518I838_9PLAN (Probable glycine dehydrogenase (decarboxylating) subunit 1 n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I838_9PLAN)

HSP 1 Score: 369 bits (946), Expect = 1.960e-123
Identity = 183/295 (62.03%), Postives = 223/295 (75.59%), Query Frame = 1
Query:    4 FMAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLEDVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTLGVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLIGQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTLGPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAY-DRPFFHEFTLKYEGNATALRDKAAQAGCDIGPEI-----------DAHTLLLAVTEQRTQ 852
            FMA RVT R  R+V+LGS+HP+YR VVETY ++L+CEVV VP   G  D  DV  A+NDQT+CLV+QHPN+FG LE+   L + AH  GAL++VS +P +LG+LKRPGDYGADI +AEGQ LG PLQ+GGPYLGLF+C EKFVR+MPGRLIGQ  DRNG+ CYVL+LQ REQHIRRDKATSNIC+NQGL+A+RA VYL+ LG QG++EVA L CQKAHYAAE+L  I+GL L + +R FF EF L     A  L  KA QAG D+GPE+           D   +L+A+TEQRT+
Sbjct:  145 FMAMRVTNRHDRVVLLGSLHPEYRQVVETYLKHLNCEVVVVPCVNGSVDPADVDAAMNDQTACLVIQHPNFFGTLEEAEQLTEIAHKYGALSVVSYDPISLGILKRPGDYGADIAIAEGQSLGTPLQFGGPYLGLFSCSEKFVRRMPGRLIGQTVDRNGKRCYVLNLQAREQHIRRDKATSNICSNQGLIAIRAAVYLALLGKQGIREVAELCCQKAHYAAEQLAQIEGLQLPFPERAFFKEFVLSCSEGADYLLRKARQAGFDLGPELSRFEWTDGSGADQTGVLVAITEQRTR 439          
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Match: A0A5C5X217_9PLAN (Probable glycine dehydrogenase (decarboxylating) subunit 1 n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X217_9PLAN)

HSP 1 Score: 367 bits (943), Expect = 4.740e-123
Identity = 180/292 (61.64%), Postives = 225/292 (77.05%), Query Frame = 1
Query:    4 FMAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLEDVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTLGVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLIGQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTLGPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAYDRPFFHEFTLKYEGNATALRDKAAQAGCDIGPEI--------DAH-TLLLAVTEQRTQ 852
            FMA RVT RD ++++   VHP++R VVETYTR LD EV+++P   G  DL  +K  ++DQ +C+V Q PN+FGC+E   ++ + A   GAL++VS +P +LGVLKRP DYGADI VAEGQ LGIPLQ+GGPYLG+ ACR++FVRKMPGRLI  AKDR+G+ CYVL LQTREQHIRRDKATSNICTNQGLLALRATVYLS +GP+GL+E A LSCQKAHYAA++L  +DGL LA+D PFF EFTL Y G+A  L  +AA AG DIGP +         +H ++L+AVTE R++
Sbjct:  143 FMAMRVTRRDGKILLSEGVHPEFRQVVETYTRELDTEVITIPAVNGVTDLSRLKEVIDDQVACVVFQQPNFFGCIEPGEEICEIARKHGALSVVSFDPLSLGVLKRPADYGADIGVAEGQSLGIPLQFGGPYLGILACRDEFVRKMPGRLISLAKDRDGKQCYVLGLQTREQHIRRDKATSNICTNQGLLALRATVYLSLMGPEGLREAATLSCQKAHYAADRLQEVDGLKLAFDGPFFKEFTLSYSGDADELVKRAADAGFDIGPSLKHFPGAPESSHDSVLIAVTETRSK 434          
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Match: A0A517X2H2_9PLAN (Probable glycine dehydrogenase (decarboxylating) subunit 1 n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X2H2_9PLAN)

HSP 1 Score: 367 bits (942), Expect = 7.890e-123
Identity = 180/295 (61.02%), Postives = 224/295 (75.93%), Query Frame = 1
Query:    4 FMAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLEDVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTLGVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLIGQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTLGPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAYD-RPFFHEFTLKYEGNATALRDKAAQAGCDIGPEIDAHT-----------LLLAVTEQRTQ 852
            FMA RVT R  R+V+LGS+HP+YR VVE+Y  +L+CEVV VP   G  D  DV   +NDQT+CLVMQHPN+ G LE+   L + AH  GAL++VS +P +LG+LKRPGDYGADI +AEGQ LG PLQ+GGPYLGLF+C +KFVR+MPGRLIGQ  DRNG++C+VL+LQ REQHIRRDKATSNIC+NQGL+A+RATVYLS LG QG++EVANLSCQKAHYAAE+L+ I+G+ L ++ RPFF EF +        L  KA QAG D+GPE+               +L+A+TEQRT+
Sbjct:  145 FMAMRVTNRHNRIVLLGSMHPEYRQVVESYLNHLNCEVVVVPCVNGCVDPADVDEVMNDQTACLVMQHPNFLGTLEEAEQLTEIAHKYGALSVVSYDPISLGLLKRPGDYGADIAIAEGQSLGTPLQFGGPYLGLFSCSKKFVRRMPGRLIGQTVDRNGKSCFVLNLQAREQHIRRDKATSNICSNQGLIAIRATVYLSLLGKQGIREVANLSCQKAHYAAEQLSQIEGINLLFNNRPFFKEFVISCSEGPDYLLRKARQAGFDLGPELSRFDFQNGSELYQTGVLVAITEQRTR 439          
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Match: UPI0014233DF3 (aminomethyl-transferring glycine dehydrogenase subunit GcvPA n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI0014233DF3)

HSP 1 Score: 365 bits (936), Expect = 5.450e-122
Identity = 177/290 (61.03%), Postives = 222/290 (76.55%), Query Frame = 1
Query:    4 FMAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLEDVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTLGVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLIGQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTLGPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAYDRPFFHEFTLKYEGNATALRDKAAQAGCDIGPEI-------DAHTLLLAVTEQRTQ 852
            FMA RV  R  R+V+LGSVHP+YR V+ETY   L  E+V+VPT  G AD + V+ A+++ T+CLV+QHPN+FGCLED   L   AH+ GALA+VS +P +LG+L++PG+YG DI VAEGQ LG+PLQYGGPYLG+ ACR+KF+RKMPGRLIG   DR+G+  YVL+LQ REQHIRRDKATSNICTNQGLLALRATVYLS +GPQGL+EVA L CQKAHYAAE+LT IDGL L +  PFF EF ++ E + T + +KA  AG D+GP +         +  L+A+TE+ T+
Sbjct:  145 FMAMRVKNRYDRVVMLGSVHPEYREVLETYCSNLPTEIVTVPTPNGVADPDAVREAMSESTACLVIQHPNFFGCLEDAKTLTDIAHEFGALAVVSFDPISLGLLQKPGEYGVDIAVAEGQSLGVPLQYGGPYLGILACRQKFLRKMPGRLIGTTVDRDGKPSYVLNLQAREQHIRRDKATSNICTNQGLLALRATVYLSLMGPQGLREVAELCCQKAHYAAEQLTQIDGLELMFSGPFFKEFAIRCEHDPTEILEKAQAAGFDVGPNLKQFSTIDSGNGFLVAITEKHTK 434          
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Match: A6CF77_9PLAN (Probable glycine dehydrogenase (decarboxylating) subunit 1 n=14 Tax=Planctomycetaceae TaxID=126 RepID=A6CF77_9PLAN)

HSP 1 Score: 363 bits (931), Expect = 2.410e-121
Identity = 178/295 (60.34%), Postives = 224/295 (75.93%), Query Frame = 1
Query:    4 FMAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLEDVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTLGVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLIGQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTLGPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAY-DRPFFHEFTLKYEGNATALRDKAAQAGCDIGPEIDAH-----------TLLLAVTEQRTQ 852
            FMA RVT R KR+V+LGS+HP+Y+ VVETY  +L+CEVV VP   G AD   V  A+N++T+CLV+QHPN+FG LE+   L + AH  GAL++VS +P +LG+LKRPGDYGADI +AEGQ LG PLQ+GGPYLGLF+C EKFVR+MPGRLIGQ  DRNG+ CYVL+LQ REQHIRRDKATSNIC+NQGL+A+RA VYL+ LG QG++EVA LSCQKAHYAAE+L +++G+ L + +R FF EF +     A  L  KA QAG D+GPE+               +L+A+TEQRT+
Sbjct:  132 FMAMRVTNRHKRVVLLGSLHPEYQQVVETYLTHLNCEVVIVPCIDGAADPAAVDAAMNEETACLVIQHPNFFGTLEEAEQLTEIAHKYGALSVVSYDPISLGILKRPGDYGADIAIAEGQSLGTPLQFGGPYLGLFSCSEKFVRRMPGRLIGQTVDRNGKRCYVLNLQAREQHIRRDKATSNICSNQGLIAIRAAVYLALLGKQGIREVAELSCQKAHYAAEQLASVEGIELLFPERSFFKEFAVSCSEGADYLLRKARQAGFDLGPELSRFESQQSPEKFQTAVLVAITEQRTR 426          
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Match: A0A353Z988_9PLAN (Probable glycine dehydrogenase (decarboxylating) subunit 1 n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353Z988_9PLAN)

HSP 1 Score: 363 bits (932), Expect = 2.420e-121
Identity = 187/294 (63.61%), Postives = 217/294 (73.81%), Query Frame = 1
Query:    1 VFMAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLEDVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTLGVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLIGQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTLGPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAYDRPFFHEFTLKYEGNATALRDKAAQAGCDIGPEIDA----------HTLLLAVTEQRTQ 852
            VFMA RVT R +R+VVLGSVHPQ R V +TY   +DCE+V VPT  G AD+ +V  ALNDQT+CLV+Q PNY GCLE   +L  AA  VGALAIVS  P +LG+L RPGD GADI VAEGQ LGIPLQYGGPYLG+ ACRE++VRKMPGRLIG+  DR GR  +VL+LQ REQHIRRDKATSNICTNQGL+ALRATV+LS LGPQGL+E ANL  QKAHYAA +L A+ GL L    PFF EF ++  G A  +  KA QAG D+GP +              LL+AVTEQRT+
Sbjct:  144 VFMAMRVTDRHRRVVVLGSVHPQARQVCQTYLNQIDCELVIVPTPEGMADVAEVVRALNDQTACLVIQSPNYLGCLEQTRELCAAARKVGALAIVSCQPLSLGLLTRPGDVGADIAVAEGQSLGIPLQYGGPYLGVLACREEYVRKMPGRLIGETVDREGRRTFVLNLQAREQHIRRDKATSNICTNQGLMALRATVFLSLLGPQGLRETANLCLQKAHYAAGRLAAVPGLELVSRSPFFLEFAIRCRGGAGPVLAKARQAGFDLGPALGPDDVPGLRAPEECLLVAVTEQRTR 437          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85995.20043.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517ZNT4_9PLAN4.450e-13367.82Probable glycine dehydrogenase (decarboxylating) s... [more]
A0A3E0PVK5_9BACT1.980e-13063.82Probable glycine dehydrogenase (decarboxylating) s... [more]
A0A517TAN4_9PLAN3.000e-12562.50Probable glycine dehydrogenase (decarboxylating) s... [more]
A0A6I6ACF6_9PLAN1.200e-12461.36Probable glycine dehydrogenase (decarboxylating) s... [more]
A0A518I838_9PLAN1.960e-12362.03Probable glycine dehydrogenase (decarboxylating) s... [more]
A0A5C5X217_9PLAN4.740e-12361.64Probable glycine dehydrogenase (decarboxylating) s... [more]
A0A517X2H2_9PLAN7.890e-12361.02Probable glycine dehydrogenase (decarboxylating) s... [more]
UPI0014233DF35.450e-12261.03aminomethyl-transferring glycine dehydrogenase sub... [more]
A6CF77_9PLAN2.410e-12160.34Probable glycine dehydrogenase (decarboxylating) s... [more]
A0A353Z988_9PLAN2.420e-12163.61Probable glycine dehydrogenase (decarboxylating) s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85995contigM-pyrifera_M_contig85995:2..853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score362.8
Seed ortholog evalue1.4e-97
Seed eggNOG ortholog344747.PM8797T_17929
Preferred namegcvPA
KEGG rclassRC00022,RC00929,RC02834,RC02880
KEGG koko:K00281,ko:K00282
KEGG ReactionR01221,R03425
KEGG Pathwayko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200
KEGG ModuleM00532
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204
EggNOG free text desc.The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EggNOG OGs2IXNG@203682,COG0403@1,COG0403@2
EC1.4.4.2
COG Functional cat.E
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size852
Cds size846
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.351676-CDS-M-pyrifera_M_contig85995:1..8471622816770.351676-CDS-M-pyrifera_M_contig85995:1..847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85995 2..847 -
1692278168.3118052-CDS-M-pyrifera_M_contig85995:1..8471692278168.3118052-CDS-M-pyrifera_M_contig85995:1..847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85995 2..847 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.3627448-UTR-M-pyrifera_M_contig85995:847..8531622816770.3627448-UTR-M-pyrifera_M_contig85995:847..853Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85995 848..853 -
1692278168.325955-UTR-M-pyrifera_M_contig85995:847..8531692278168.325955-UTR-M-pyrifera_M_contig85995:847..853Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85995 848..853 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85995.20043.1prot_M-pyrifera_M_contig85995.20043.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85995 2..847 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85995.20043.1

>prot_M-pyrifera_M_contig85995.20043.1 ID=prot_M-pyrifera_M_contig85995.20043.1|Name=mRNA_M-pyrifera_M_contig85995.20043.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=282bp
MAERVTGRDKRLVVLGSVHPQYRNVVETYTRYLDCEVVSVPTACGFADLE
DVKTALNDQTSCLVMQHPNYFGCLEDVADLIQAAHDVGALAIVSTNPTTL
GVLKRPGDYGADIVVAEGQPLGIPLQYGGPYLGLFACREKFVRKMPGRLI
GQAKDRNGRTCYVLSLQTREQHIRRDKATSNICTNQGLLALRATVYLSTL
GPQGLKEVANLSCQKAHYAAEKLTAIDGLTLAYDRPFFHEFTLKYEGNAT
ALRDKAAQAGCDIGPEIDAHTLLLAVTEQRTQ
back to top

mRNA from alignment at M-pyrifera_M_contig85995:2..853-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85995.20043.1 ID=mRNA_M-pyrifera_M_contig85995.20043.1|Name=mRNA_M-pyrifera_M_contig85995.20043.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig85995:2..853- (Macrocystis pyrifera P11B4 male)
GTCTTCATGGCCGAACGGGTCACTGGTCGTGACAAACGTTTGGTCGTGCT TGGCTCGGTCCATCCGCAATACCGAAACGTCGTCGAAACCTACACCCGTT ACCTCGACTGCGAAGTCGTCAGCGTCCCCACCGCTTGTGGTTTCGCAGAC TTGGAAGACGTCAAGACTGCCCTCAACGATCAAACATCCTGCCTCGTTAT GCAGCACCCCAACTACTTCGGGTGCCTCGAAGATGTCGCCGACCTCATTC AGGCCGCTCATGACGTCGGTGCCCTCGCCATCGTCAGCACCAACCCCACC ACGCTCGGCGTTCTCAAACGGCCGGGCGACTACGGGGCCGACATTGTTGT CGCTGAGGGCCAACCGCTGGGGATCCCGTTGCAATACGGTGGCCCCTACC TCGGCCTGTTTGCCTGCCGCGAGAAGTTCGTCCGCAAGATGCCCGGCCGT CTCATCGGACAGGCGAAGGACCGCAACGGTCGCACCTGCTACGTCCTCAG CTTGCAAACCCGCGAGCAACACATCCGCCGCGACAAAGCAACGAGTAACA TTTGCACCAACCAGGGTCTTCTCGCGCTCAGGGCAACCGTCTATCTGTCG ACCCTCGGCCCGCAGGGATTGAAAGAAGTCGCCAACCTCTCCTGCCAGAA GGCCCACTACGCCGCCGAGAAGCTCACAGCCATCGACGGCCTCACGCTCG CCTACGACCGCCCCTTCTTCCACGAGTTCACGCTCAAGTATGAAGGCAAT GCCACCGCACTTCGCGACAAAGCGGCCCAAGCCGGTTGCGACATCGGTCC CGAGATCGACGCCCACACCCTCCTCCTCGCCGTGACCGAACAACGCACGC AG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig85995:2..853-

>mRNA_M-pyrifera_M_contig85995.20043.1 ID=mRNA_M-pyrifera_M_contig85995.20043.1|Name=mRNA_M-pyrifera_M_contig85995.20043.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1692bp|location=Sequence derived from alignment at M-pyrifera_M_contig85995:2..853- (Macrocystis pyrifera P11B4 male)
ATGGCCGAACGGGTCACTGGTCGTGACAAACGTTTGGTCGTGCTTGGCTC
GGTCCATCCGCAATACCGAAACGTCGTCGAAACCTACACCCGTTACCTCG
ACTGCGAAGTCGTCAGCGTCCCCACCGCTTGTGGTTTCGCAGACTTGGAA
GACGTCAAGACTGCCCTCAACGATCAAACATCCTGCCTCGTTATGCAGCA
CCCCAACTACTTCGGGTGCCTCGAAGATGTCGCCGACCTCATTCAGGCCG
CTCATGACGTCGGTGCCCTCGCCATCGTCAGCACCAACCCCACCACGCTC
GGCGTTCTCAAACGGCCGGGCGACTACGGGGCCGACATTGTTGTCGCTGA
GGGCCAACCGCTGGGGATCCCGTTGCAATACGGTGGCCCCTACCTCGGCC
TGTTTGCCTGCCGCGAGAAGTTCGTCCGCAAGATGCCCGGCCGTCTCATC
GGACAGGCGAAGGACCGCAACGGTCGCACCTGCTACGTCCTCAGCTTGCA
AACCCGCGAGCAACACATCCGCCGCGACAAAGCAACGAGTAACATTTGCA
CCAACCAGGGTCTTCTCGCGCTCAGGGCAACCGTCTATCTGTCGACCCTC
GGCCCGCAGGGATTGAAAGAAGTCGCCAACCTCTCCTGCCAGAAGGCCCA
CTACGCCGCCGAGAAGCTCACAGCCATCGACGGCCTCACGCTCGCCTACG
ACCGCCCCTTCTTCCACGAGTTCACGCTCAAGTATGAAGGCAATGCCACC
GCACTTCGCGACAAAGCGGCCCAAGCCGGTTGCGACATCGGTCCCGAGAT
CGACGCCCACACCCTCCTCCTCGCCGTGACCGAACAACGCACGCAGATGG
CCGAACGGGTCACTGGTCGTGACAAACGTTTGGTCGTGCTTGGCTCGGTC
CATCCGCAATACCGAAACGTCGTCGAAACCTACACCCGTTACCTCGACTG
CGAAGTCGTCAGCGTCCCCACCGCTTGTGGTTTCGCAGACTTGGAAGACG
TCAAGACTGCCCTCAACGATCAAACATCCTGCCTCGTTATGCAGCACCCC
AACTACTTCGGGTGCCTCGAAGATGTCGCCGACCTCATTCAGGCCGCTCA
TGACGTCGGTGCCCTCGCCATCGTCAGCACCAACCCCACCACGCTCGGCG
TTCTCAAACGGCCGGGCGACTACGGGGCCGACATTGTTGTCGCTGAGGGC
CAACCGCTGGGGATCCCGTTGCAATACGGTGGCCCCTACCTCGGCCTGTT
TGCCTGCCGCGAGAAGTTCGTCCGCAAGATGCCCGGCCGTCTCATCGGAC
AGGCGAAGGACCGCAACGGTCGCACCTGCTACGTCCTCAGCTTGCAAACC
CGCGAGCAACACATCCGCCGCGACAAAGCAACGAGTAACATTTGCACCAA
CCAGGGTCTTCTCGCGCTCAGGGCAACCGTCTATCTGTCGACCCTCGGCC
CGCAGGGATTGAAAGAAGTCGCCAACCTCTCCTGCCAGAAGGCCCACTAC
GCCGCCGAGAAGCTCACAGCCATCGACGGCCTCACGCTCGCCTACGACCG
CCCCTTCTTCCACGAGTTCACGCTCAAGTATGAAGGCAATGCCACCGCAC
TTCGCGACAAAGCGGCCCAAGCCGGTTGCGACATCGGTCCCGAGATCGAC
GCCCACACCCTCCTCCTCGCCGTGACCGAACAACGCACGCAG
back to top