mRNA_M-pyrifera_M_contig85801.20008.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85801.20008.1
Unique NamemRNA_M-pyrifera_M_contig85801.20008.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Match: A0A5A8DET5_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DET5_CAFRO)

HSP 1 Score: 165 bits (418), Expect = 1.230e-43
Identity = 113/261 (43.30%), Postives = 160/261 (61.30%), Query Frame = 1
Query:    1 IWYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPGPHLED-KDAYFVLDVITVSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLE-VSINPDLPRWSATLQLLRXXXXXXXXXXXXXVESLQLLQGALIASVAPLSMAFFLMFVGLIIFASLMYFVERGELDRDQERYEDEDGEPTQFQNAWDGFWWALITVTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANFGDLYDMATRRNALRKEM 777
            IW   +DP  S+ A      + + + IST  L+MET+P  +L+  KDA+ V++V+   +FT E + R++  P+   F    +  VD+ + +P YLE V  + D    +       XXXXXXXXXX     S++L+  AL  S  PL MA FL  +G ++FAS +Y++ERGE  +++  Y   +G P++FQ+  DG WW++ITV TVGYGD VP +GLGK +G VV   G V+L FPISIF+ANF DLY    RR ALRKE+
Sbjct:  118 IWSILEDPGMSRCARFTGVWMSLAITISTISLVMETMP--NLDSWKDAFHVIEVMVTVVFTLEILLRVVTCPSPGAF-CSFMNVVDILAVLPLYLEAVMHSEDASGATXXXXXXXXXXXXXXXXXARYFSSIKLITNALSMSTTPLLMALFLALLGNLLFASGIYYIERGEWSQERMLYLKANGRPSEFQSIIDGLWWSMITVATVGYGDTVPSSGLGKTLGVVVAFSGVVILAFPISIFAANFSDLYRFTRRRAALRKEL 375          
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Match: A0A5A8E4H0_CAFRO (EF-hand domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E4H0_CAFRO)

HSP 1 Score: 167 bits (422), Expect = 1.340e-43
Identity = 114/261 (43.68%), Postives = 160/261 (61.30%), Query Frame = 1
Query:    1 IWYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPGPHLED-KDAYFVLDVITVSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLE-VSINPDLPRWSATLQLLRXXXXXXXXXXXXXVESLQLLQGALIASVAPLSMAFFLMFVGLIIFASLMYFVERGELDRDQERYEDEDGEPTQFQNAWDGFWWALITVTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANFGDLYDMATRRNALRKEM 777
            IW   +DP  S+ A      + + + IST  L+MET+P  +L+  KDA+ V++V+   +FT E + R++  P+   F    +  VD+ + +P YLE V  + D    +       XXXXXXXXXX     S++L+  AL  S  PL MA FL  +G ++FAS +Y++ERGE  ++Q  Y   +G P++FQ+  DG WW++ITV TVGYGD VP +GLGK +G VV   G V+L FPISIF+ANF DLY    RR ALRKE+
Sbjct:   70 IWSILEDPGMSRCARFTGVWMSLAITISTISLVMETMP--NLDSWKDAFHVIEVMVTVVFTLEILLRVVTCPSPGAF-CSFMNVVDILAVLPLYLEAVMHSEDASGATXXXXXXXXXXXXXXXXXARYFSSIKLITNALSMSTTPLLMALFLALLGNLLFASGIYYIERGEWSQEQMLYLKANGRPSEFQSIIDGLWWSMITVATVGYGDTVPSSGLGKTLGVVVAFSGVVILAFPISIFAANFSDLYRFTRRRAALRKEL 327          
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Match: A0A7S1CET9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CET9_9STRA)

HSP 1 Score: 155 bits (392), Expect = 9.840e-40
Identity = 103/261 (39.46%), Postives = 149/261 (57.09%), Query Frame = 1
Query:    1 IWYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPGPHLEDKDAYFVLDVIT---VSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLEVSINPDLPRWSATLQLLRXXXXXXXXXXXXXVESLQLLQGALIASVAPLSMAFFLMFVGLIIFASLMYFVERGELDRDQERYEDEDGEPTQFQNAWDGFWWALITVTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANFGDLYDMATRRNALRKE 774
            +W T DDP +S +A +I+  +   + +S    I++++P    E + A   LD I    + +FT EF+ RLL TP+   F    L W+DL S +PFYLE  +  +    S  L++ R  XXXXXXXX   +  ++L+  A+I S+APL MA F+  +  +I  S MY++ERG  D     Y  + G  T F +  +  WW +IT+TTVGYGDV+PVT LGK +  +    G VLL  PIS+FSANF   Y +  ++  L KE
Sbjct:  121 VWTTMDDPSFSPLARVISLFIMFLIFVSIVAYILDSMP----ELRSAAGTLDDIETFCIVVFTIEFLVRLLATPDLIAFARGVLNWIDLISILPFYLERVLGGNSSATSV-LRIFRLVXXXXXXXXSRYISWIKLISYAVIKSLAPLGMAIFITLIATVILGSAMYYIERGTWDPHLRVYITDGGVETDFVSIPEACWWCVITMTTVGYGDVLPVTPLGKLLACITSLSGIVLLAIPISVFSANFAKQYSLLLKKRQLAKE 376          
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Match: A0A0G4J8X2_PLABS (Ion_trans domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J8X2_PLABS)

HSP 1 Score: 148 bits (374), Expect = 4.490e-38
Identity = 96/269 (35.69%), Postives = 149/269 (55.39%), Query Frame = 1
Query:    1 IWYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPGPHLEDKDAYFVLDVITVSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLEVSINPDLPRWSATLQLLRXXXXXXXXXXXXXVESLQLLQGALIASVAPLSMAFFLMFVGLIIFASLMYFVERGELDRDQERYEDEDGEPTQFQNAWDGFWWALITVTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANFG------------DLYDMATRRNALRK 771
            IW   DDP  S VA  +A  +   ++++    I+ETVPG    D + +  ++ I V  FT E   RLL  P++  +  +P+ WVD+ +  P+Y+E  +       S+  +   XXXXXXXXXX   +  + +   A+  S  PL+M  ++M + L++F++ MY+ ERG L+     +E  DG P+ + +    FWW +IT+TTVGYGDVVP+TG G+FI  +    G ++L  PI+I SANF             D+  +AT R+AL +
Sbjct:   63 IWALVDDPSSSTVAQALAISIMALIVLTGVAFILETVPGEASIDPNVWNTIETICVVCFTIELAVRLLSCPDYGAYIREPMNWVDIIAIAPWYVETFVTSSGASSSSVFRXXXXXXXXXXXXXSRYITWISVFSNAIRVSAHPLAMLLYIMALALVLFSTAMYYAERGTLNAVTNIWERPDGSPSPYYSIPATFWWCIITITTVGYGDVVPITGTGRFIAGLAALCGILVLAIPITIISANFNSELDRMVHLKDIDVTTLATLRDALER 331          
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Match: A0A150GX52_GONPE (Ion_trans domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GX52_GONPE)

HSP 1 Score: 141 bits (355), Expect = 2.240e-34
Identity = 86/264 (32.58%), Postives = 144/264 (54.55%), Query Frame = 1
Query:    1 IWYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPGPHLEDKD----AYFVLDVITVSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLEVSINPDLPRWSATLQLLRXXXXXXXXXXXXXVESLQLLQGALIASVAPLSMAFFLMFVGLIIFASLMYFVERGELD-------RDQERYEDEDGEP--TQFQNAWDGFWWALITVTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANFGDLYDMATR 753
            +W    D   S+ A  ++ +V +T+L+ST    +ETVP    E       A+ V++ +TV IF A+++ RLL  P    F L PL  +DL SF+P+Y+E+++     + +A  +++R                L ++  AL  S   L++  F + + +++ A+L YF ERG LD       RD E+Y + +G+P  + F++   GFWWA++TV TVGYGDVVP++  G+ I A  M  G + +  P+++   NF   ++ AT+
Sbjct:  169 LWRLMTDADSSRAAYGVSILVLLTILLSTICFCLETVPAFSEERSPSSHRAFGVVETVTVQIFAADYLLRLLSCPRLLPFLLAPLNIIDLVSFVPWYIELAMQDSGMQGTAVFRIMRLLRVFRVLKLGGRYRKLLVVTRALARSADMLALMAFFVSLTVVVAATLQYFAERGTLDPSLGYYIRDHEKYTNSNGDPIVSPFESIPAGFWWAIVTVMTVGYGDVVPISAGGRIIAAATMLCGILSIALPVAVIGNNFSSEWEAATK 432          
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Match: A0A7S2S5R2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S5R2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.130e-34
Identity = 95/259 (36.68%), Postives = 147/259 (56.76%), Query Frame = 1
Query:    4 WYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPGPHLEDKDAYFV---LDVITVSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLEVSINPDLPRWSATLQLLRXXXXXXXXXXXXXVESLQLLQGALIASVAPLSMAFFLMFVGLIIFASLMYFVERGELDRDQERYEDEDGEPTQFQNAWDGFWWALITVTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANFGDLYD-MATRRNALR 768
            W   DDP  S  A + +  + + +  S  V  +E++P  +L+ +D   +   ++ I V IFT E++ RL+  PN  KF    L  +DL + +PFYLE     +    SA  +++ XXXXXXXXXX   +  + +   A+I S  PL+M  F+M +G + F+S M+F+E+GE D   E Y  E G+ + FQ+    FWW L+T+TTVGYGDV P+T  GK + ++    G ++L  PI+I S NF   Y+ +  +R  +R
Sbjct:   79 WAFLDDPSSSDGAQIFSLALMMVITFSVVVFCLESLPMFYLDAEDDNSIWAWIETICVIIFTVEYVLRLISCPNKLKFLKSVLNTIDLAAIVPFYLEKYFTVN----SAVFRVVXXXXXXXXXXXSRYLSWISIFMEAMIQSAQPLTMLLFVMMIGCVFFSSAMFFIEKGEFDEVNEVYMRE-GKESPFQSIPATFWWCLVTMTTVGYGDVYPITPAGKLVASLASLTGILVLAIPITIISTNFSVEYEKLKKQRKTMR 332          
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Match: A0A8J4B1I2_9CHLO (Ion_trans domain-containing protein (Fragment) n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B1I2_9CHLO)

HSP 1 Score: 138 bits (348), Expect = 1.310e-33
Identity = 86/267 (32.21%), Postives = 145/267 (54.31%), Query Frame = 1
Query:    1 IWYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPGPHLEDKD-----AYFVLDVITVSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLEVSINPDLPRWSATLQLLRXXXXXXXXXXXXXVESLQLLQGALIASVAPLSMAFFLMFVGLIIFASLMYFVERGELDRDQERYEDEDGE-PTQFQNAWDGFWWALITVTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANFGDLYDMATRRNALRKEMNQ 783
            +W    DP  S  A  I+ ++   +++ST    +ETVP  + +D+D     A++ +++ITV IFT ++I RL+  P+  +F   P+  +DL S +P+Y+E+++     + +A  ++LR                L L+   L  SV  L +  F + V      +LM+F ERG  + D   YE  +GE  + F++   GFWWA++T+ TVGYGDV P+T  G+FI  + M  G + +  P+++ S+NF  L++ A +R   R E+ Q
Sbjct:  294 LWKLMTDPDSSARAYAISIVMITAIILSTVCFCLETVPA-YSKDRDPDVNAAFWYVELITVQIFTTDYILRLISCPSLVRFLFSPMNIIDLVSVVPWYVEIALEDSGLKGTAVFRVLRLLRVFRVLKLGARYRKLLLVTSTLANSVDMLMLMVFFVSVXXXXXXTLMFFAERGSYNDDLHYYERREGEGASPFESIPSGFWWAIVTLMTVGYGDVAPITVGGRFIACITMLCGILSIALPVAVISSNFTGLWE-AYQRQQKRLEVGQ 558          
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Match: A0A0C5GFJ1_NEMVE (ShawR1 n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A0A0C5GFJ1_NEMVE)

HSP 1 Score: 136 bits (342), Expect = 1.870e-33
Identity = 94/265 (35.47%), Postives = 137/265 (51.70%), Query Frame = 1
Query:    1 IWYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPGPHLED---KDAYFVLDVITVSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLEVSINPDLPRWSATLQLLRXXXXXXXXXXXXXVESLQLLQGALIASVAPLSMAFFLMFVGLIIFASLMYFVERGELDRDQERYEDEDGEPTQFQNAWDGFWWALITVTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANFGDLYDMA-TRRNALRKEMNQ 783
            +W   DDP  SK + +   I  + +L+S +   + TVP    +    K  Y+ LD  T   FT EF+ RL+F P+  +F  +P+ WVDL + +PFY  +    D   W   ++ LR               S Q+L  +LI+S   L + F  + V +I+F+S++YF E+   D++             FQ+  + FWWA+ITVTTVGYGDV PVT LGK IGAV    G V++  P+S+  +NF   Y  A TR    R+  NQ
Sbjct:  176 VWAFLDDPHSSKASWVFIMISCLMILVSVTQFCLGTVPSLREDSFTMKVLYW-LDFSTSIWFTVEFVLRLVFCPSTKEFAKNPMNWVDLTAILPFYFRLFKLQDQISWLVVMRTLRIFRIFSLSL------SFQILFRSLISSKNELFLVFVSVMVPIILFSSMIYFAEKDANDKN-------------FQSIPESFWWAIITVTTVGYGDVCPVTKLGKVIGAVCAICGVVIVALPVSVIGSNFSYYYIQARTRVQQPRRANNQ 420          
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Match: UPI001BB0ED06 (potassium voltage-gated channel protein Shaw-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB0ED06)

HSP 1 Score: 137 bits (344), Expect = 3.270e-33
Identity = 93/273 (34.07%), Postives = 139/273 (50.92%), Query Frame = 1
Query:    1 IWYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPG-----------PHLEDKDAYFVLDVITVSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLEVSINPD----LPRWSATLQLLRXXXXXXXXXXXXXVESLQLLQGALIASVAPLSMAFFLMFVGLIIFASLMYFVERGELDRDQERYEDEDGEPTQFQNAWDGFWWALITVTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANFGDLYDMATRRNALRKE 774
            IW   ++P  S+ ALL A+I FI V++S     MET               + E  +A F+L+ I V+ FT E I RL+F PN  KFFL+ L  +D+ + IPFY++  +         +W+  L  +R             +  LQ+L   L AS   L +    + +G++I +SL+Y+ ER         +  +DG+   FQN   GFWWA++T+TTVGYGD+VP T LG  +GA+    G + L  P+ +   NF   Y  A  R+ L K+
Sbjct:  189 IWTLLEEPYSSRAALLTASISFIFVMLSIMSFCMETAESFTVINNGTNGEEYSEPIEALFILEGICVAFFTIELIVRLVFCPNKVKFFLEVLNIIDIVACIPFYVDAVVKIAGEHLTGQWNEILGFMRIVRIFRIFKLARHLSGLQILVHTLKASAKELVLLIVFLGLGVLISSSLIYYAER---------WVAQDGQRNDFQNIPVGFWWAVVTMTTVGYGDLVPRTWLGMVVGAITAIIGVLTLALPVPVIVNNFALYYTHAQARSKLPKK 452          
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Match: A0A0L0DU81_THETB (Kcna5-prov protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DU81_THETB)

HSP 1 Score: 132 bits (331), Expect = 1.080e-32
Identity = 89/245 (36.33%), Postives = 155/245 (63.27%), Query Frame = 1
Query:    1 IWYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPGPHLEDKDAYFV-LDVITVSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLEVSINPDLPRWSATLQLLRXXXXXXXXXXXXXVESLQLLQGALIASVAPLSMAFFLMFVGLIIFASLMYFVERGELDRD--QERYEDEDGEPTQFQNAWDGFWWALITVTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANF 726
            ++ T DDP+YS +A  +   + + +L+ST+V  + ++P  ++ED  +  V L+++ V +FT E++ +LL   N  +F   P+  VDL + +PFY+E++++ +     A +++  XXXXXXXXXXXXX +   L+  AL+AS+  L +  FL  + ++ F+S +Y+ E  E   D  Q+R+   DG+ + FQ+    FWW+++T+TTVGYGD VP++  G+ + +V M  G +L+ FPI++  +NF
Sbjct:   65 VFATLDDPEYSAIAFWVNVFILVLILVSTAVFCVSSLPQ-YVEDTPSSLVWLEIVCVGVFTIEYVTKLLTCDNVWQFVKGPMNIVDLAAILPFYIELALSGNNLGSFAVIRVXXXXXXXXXXXXXXXXKGFGLVTQALMASLDALGLLVFLFLLAVVFFSSGLYYAELSESTYDDAQQRWIRSDGKVSPFQSIPACFWWSVVTMTTVGYGDHVPLSTAGRLVASVTMISGVLLISFPITVIGSNF 308          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85801.20008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DET5_CAFRO1.230e-4343.30Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8E4H0_CAFRO1.340e-4343.68EF-hand domain-containing protein n=3 Tax=Cafeteri... [more]
A0A7S1CET9_9STRA9.840e-4039.46Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A0G4J8X2_PLABS4.490e-3835.69Ion_trans domain-containing protein n=1 Tax=Plasmo... [more]
A0A150GX52_GONPE2.240e-3432.58Ion_trans domain-containing protein n=1 Tax=Gonium... [more]
A0A7S2S5R2_9STRA4.130e-3436.68Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A8J4B1I2_9CHLO1.310e-3332.21Ion_trans domain-containing protein (Fragment) n=1... [more]
A0A0C5GFJ1_NEMVE1.870e-3335.47ShawR1 n=2 Tax=Nematostella vectensis TaxID=45351 ... [more]
UPI001BB0ED063.270e-3334.07potassium voltage-gated channel protein Shaw-like ... [more]
A0A0L0DU81_THETB1.080e-3236.33Kcna5-prov protein n=1 Tax=Thecamonas trahens ATCC... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85801contigM-pyrifera_M_contig85801:53..838 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score137.1
Seed ortholog evalue1.2e-29
Seed eggNOG ortholog45351.EDO48059
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.voltage-gated potassium channel activity
EggNOG OGs38D0S@33154,3BAS8@33208,COG2126@1,KOG3713@2759
COG Functional cat.J
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons1
Model size786
Cds size786
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816768.3718238-CDS-M-pyrifera_M_contig85801:52..8381622816768.3718238-CDS-M-pyrifera_M_contig85801:52..838Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85801 53..838 +
1692278167.02188-CDS-M-pyrifera_M_contig85801:52..8381692278167.02188-CDS-M-pyrifera_M_contig85801:52..838Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85801 53..838 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85801.20008.1prot_M-pyrifera_M_contig85801.20008.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85801 53..838 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85801.20008.1

>prot_M-pyrifera_M_contig85801.20008.1 ID=prot_M-pyrifera_M_contig85801.20008.1|Name=mRNA_M-pyrifera_M_contig85801.20008.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=262bp
IWYTFDDPKYSKVALLIAAIVFITVLISTSVLIMETVPGPHLEDKDAYFV
LDVITVSIFTAEFICRLLFTPNHSKFFLDPLTWVDLCSFIPFYLEVSINP
DLPRWSATLQLLRILRILRVFKLTRFVESLQLLQGALIASVAPLSMAFFL
MFVGLIIFASLMYFVERGELDRDQERYEDEDGEPTQFQNAWDGFWWALIT
VTTVGYGDVVPVTGLGKFIGAVVMAGGTVLLGFPISIFSANFGDLYDMAT
RRNALRKEMNQN
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mRNA from alignment at M-pyrifera_M_contig85801:53..838+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85801.20008.1 ID=mRNA_M-pyrifera_M_contig85801.20008.1|Name=mRNA_M-pyrifera_M_contig85801.20008.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig85801:53..838+ (Macrocystis pyrifera P11B4 male)
ATTTGGTACACGTTTGATGACCCAAAGTACTCCAAAGTTGCATTGCTCAT TGCTGCTATCGTTTTCATCACTGTGCTTATATCCACAAGTGTGCTGATCA TGGAAACAGTGCCTGGCCCTCACCTCGAGGACAAGGATGCATACTTTGTC CTCGATGTTATCACTGTTAGCATTTTCACTGCAGAATTCATTTGTCGTCT CCTCTTCACCCCAAACCACTCCAAGTTTTTCCTAGATCCATTGACATGGG TTGATTTGTGCTCTTTCATTCCCTTCTACCTAGAGGTTTCCATCAACCCT GATCTTCCTCGTTGGAGTGCAACGCTGCAACTGCTTCGTATCCTCCGTAT TCTTCGAGTGTTCAAGTTGACTCGTTTTGTAGAGTCTTTGCAGTTGCTGC AAGGTGCATTGATTGCATCTGTTGCACCATTGTCCATGGCATTCTTCCTC ATGTTTGTTGGTTTGATCATCTTTGCATCGCTGATGTATTTTGTGGAGCG AGGGGAGCTAGATAGAGATCAAGAACGATATGAAGATGAAGATGGTGAAC CTACCCAGTTTCAAAACGCTTGGGATGGTTTTTGGTGGGCATTGATTACT GTCACCACAGTTGGGTATGGTGATGTTGTGCCTGTGACAGGGCTGGGGAA GTTCATTGGTGCAGTTGTGATGGCAGGTGGTACTGTGTTGTTGGGGTTTC CAATCTCCATCTTTTCTGCAAACTTTGGTGACCTCTACGACATGGCAACA CGGAGGAATGCGCTCCGAAAGGAGATGAATCAGAAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85801:53..838+

>mRNA_M-pyrifera_M_contig85801.20008.1 ID=mRNA_M-pyrifera_M_contig85801.20008.1|Name=mRNA_M-pyrifera_M_contig85801.20008.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1572bp|location=Sequence derived from alignment at M-pyrifera_M_contig85801:53..838+ (Macrocystis pyrifera P11B4 male)
ATTTGGTACACGTTTGATGACCCAAAGTACTCCAAAGTTGCATTGCTCAT
TGCTGCTATCGTTTTCATCACTGTGCTTATATCCACAAGTGTGCTGATCA
TGGAAACAGTGCCTGGCCCTCACCTCGAGGACAAGGATGCATACTTTGTC
CTCGATGTTATCACTGTTAGCATTTTCACTGCAGAATTCATTTGTCGTCT
CCTCTTCACCCCAAACCACTCCAAGTTTTTCCTAGATCCATTGACATGGG
TTGATTTGTGCTCTTTCATTCCCTTCTACCTAGAGGTTTCCATCAACCCT
GATCTTCCTCGTTGGAGTGCAACGCTGCAACTGCTTCGTATCCTCCGTAT
TCTTCGAGTGTTCAAGTTGACTCGTTTTGTAGAGTCTTTGCAGTTGCTGC
AAGGTGCATTGATTGCATCTGTTGCACCATTGTCCATGGCATTCTTCCTC
ATGTTTGTTGGTTTGATCATCTTTGCATCGCTGATGTATTTTGTGGAGCG
AGGGGAGCTAGATAGAGATCAAGAACGATATGAAGATGAAGATGGTGAAC
CTACCCAGTTTCAAAACGCTTGGGATGGTTTTTGGTGGGCATTGATTACT
GTCACCACAGTTGGGTATGGTGATGTTGTGCCTGTGACAGGGCTGGGGAA
GTTCATTGGTGCAGTTGTGATGGCAGGTGGTACTGTGTTGTTGGGGTTTC
CAATCTCCATCTTTTCTGCAAACTTTGGTGACCTCTACGACATGGCAACA
CGGAGGAATGCGCTCCGAAAGGAGATGAATCAGAACATTTGGTACACGTT
TGATGACCCAAAGTACTCCAAAGTTGCATTGCTCATTGCTGCTATCGTTT
TCATCACTGTGCTTATATCCACAAGTGTGCTGATCATGGAAACAGTGCCT
GGCCCTCACCTCGAGGACAAGGATGCATACTTTGTCCTCGATGTTATCAC
TGTTAGCATTTTCACTGCAGAATTCATTTGTCGTCTCCTCTTCACCCCAA
ACCACTCCAAGTTTTTCCTAGATCCATTGACATGGGTTGATTTGTGCTCT
TTCATTCCCTTCTACCTAGAGGTTTCCATCAACCCTGATCTTCCTCGTTG
GAGTGCAACGCTGCAACTGCTTCGTATCCTCCGTATTCTTCGAGTGTTCA
AGTTGACTCGTTTTGTAGAGTCTTTGCAGTTGCTGCAAGGTGCATTGATT
GCATCTGTTGCACCATTGTCCATGGCATTCTTCCTCATGTTTGTTGGTTT
GATCATCTTTGCATCGCTGATGTATTTTGTGGAGCGAGGGGAGCTAGATA
GAGATCAAGAACGATATGAAGATGAAGATGGTGAACCTACCCAGTTTCAA
AACGCTTGGGATGGTTTTTGGTGGGCATTGATTACTGTCACCACAGTTGG
GTATGGTGATGTTGTGCCTGTGACAGGGCTGGGGAAGTTCATTGGTGCAG
TTGTGATGGCAGGTGGTACTGTGTTGTTGGGGTTTCCAATCTCCATCTTT
TCTGCAAACTTTGGTGACCTCTACGACATGGCAACACGGAGGAATGCGCT
CCGAAAGGAGATGAATCAGAAC
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