mRNA_M-pyrifera_M_contig85689.19978.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85689.19978.1
Unique NamemRNA_M-pyrifera_M_contig85689.19978.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Match: A0A8C9RF67_SCLFO (Solute carrier family 25 member 42 n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RF67_SCLFO)

HSP 1 Score: 223 bits (567), Expect = 1.900e-67
Identity = 133/285 (46.67%), Postives = 182/285 (63.86%), Query Frame = 1
Query:   13 GERVGRNRVLAFLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQAAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKYR--PGGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGLSEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTG-SEPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSEHPIPPTMIQVFRNVVQTSGW-RGLFRALPLNYAKGPLAVAISFTT 855
            G + GR+ + + LSG  AG+VAK+A+APLDR KI+F  SS++FS + A   +  ++ +EG   LWRGN AT+ RV PYA IQ+         L K     G  L    RL AG+ AG  +A++T PLD  RAR+AV  P  ++G   +  V   + R  GM+ LYR  TPT+LG++PY+GLSF T+ETLK+   DK+G S+P + +RLAFGA AGL+GQ+AS+P+DV RRRMQT   T       T++   R +V   G  RGL++ L +N+ KGP+AV ISFTT
Sbjct:   28 GYKQGRSVLKSLLSGAFAGAVAKTAVAPLDRTKIMFQVSSNRFSAKEAYKLIYRMYLKEGFFSLWRGNSATMVRVVPYAAIQFCAHEQYKHLLGKRYGFQGKALPPFPRLLAGSLAGTTAAMLTYPLDMVRARMAVT-PKEMYGN--ILHVFVRISREEGMKTLYRGFTPTILGVVPYAGLSFFTYETLKKLHADKSGRSQPYSYERLAFGACAGLIGQSASYPLDVVRRRMQTAGVTGH--TYSTIVGTMREIVAEEGVVRGLYKGLSMNWVKGPIAVGISFTT 307          
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Match: W5UJP0_ICTPU (Mitochondrial coenzyme A transporter SLC25A42 n=7 Tax=Otomorpha TaxID=186634 RepID=W5UJP0_ICTPU)

HSP 1 Score: 217 bits (552), Expect = 1.140e-65
Identity = 130/285 (45.61%), Postives = 178/285 (62.46%), Query Frame = 1
Query:   13 GERVGRNRVLAFLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQAAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKYR--PGGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGLSEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTG-SEPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSEHPIPPTMIQVFRNVVQTSGW-RGLFRALPLNYAKGPLAVAISFTT 855
            G + GRN +   LSG  AG+VAK+A+APLDR KIIF  SS++FS + A   +   +  EG   LWRGN AT+ RV PYA IQ+       + L  Y    G  L    RL AG+ AG  +A++T PLD  RAR+AV  P  ++  + +  V   + R  G++ LY   TPT+LG++PY+GLSF T+ETLK+   +KTG ++P + +RLAFGA AGL+GQ+AS+P+DV RRRMQT   T       T++   R +V   G  RGL++ L +N+ KGP+AV ISF T
Sbjct:   28 GFKQGRNVLNTLLSGAFAGAVAKTAVAPLDRTKIIFQVSSNRFSAKEAYRLIYRTYLTEGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKRLLGGYYGFQGKALPPVPRLLAGSLAGITAAMLTYPLDMVRARMAVT-PKEMY--SNIMHVFVRISRDEGLKTLYSGFTPTILGVVPYAGLSFFTYETLKKLHAEKTGRAQPYSYERLAFGACAGLIGQSASYPLDVVRRRMQTAGVTGR--AYSTIVGTMREIVSEEGVIRGLYKGLSMNWVKGPIAVGISFMT 307          
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Match: A0A3B4D6T6_PYGNA (Solute carrier family 25 member 42 n=6 Tax=Clupeocephala TaxID=186625 RepID=A0A3B4D6T6_PYGNA)

HSP 1 Score: 217 bits (552), Expect = 1.210e-65
Identity = 127/285 (44.56%), Postives = 183/285 (64.21%), Query Frame = 1
Query:   13 GERVGRNRVLAFLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQAAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKYR--PGGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGLSEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTG-SEPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSEHPIPPTMIQVFRNVVQTSGW-RGLFRALPLNYAKGPLAVAISFTT 855
            G +  R+ + +  SG +AG+VAK+A+APLDR KIIF  SS++FS + A   +   + ++G   LWRGN AT+ RV PYA IQ+       + L +Y    G  L    RL AG+ AG  +A++T PLD  RAR+AV  P  ++  + + +V   + R  G++ LYR  TPT+LG++PY+GLSF T+ETLK+   +KTG ++P + +RLAFGA AGL+GQ+AS+P+DV RRRMQT   T    +  T++   R +V   G  RGL++ L +N+ KGP+AV ISF T
Sbjct:   28 GFKQSRSVLNSLFSGALAGAVAKTAVAPLDRTKIIFQVSSNRFSAKEAYRLIYRTYRKDGFFSLWRGNSATMVRVIPYAAIQFCAHEQYKRLLGRYYGFQGKALPPVPRLLAGSLAGTTAAMLTYPLDMVRARMAVT-PKEMY--SNILDVFVRISREEGLKTLYRGFTPTILGVVPYAGLSFFTYETLKKLHAEKTGRAQPYSYERLAFGACAGLIGQSASYPLDVVRRRMQTAGVTGH--MYGTILGTMREIVAEEGIIRGLYKGLSMNWVKGPIAVGISFMT 307          
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Match: A0A8C5WGS0_9ANUR (Solute carrier family 25 member 42 n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5WGS0_9ANUR)

HSP 1 Score: 217 bits (553), Expect = 1.320e-65
Identity = 127/274 (46.35%), Postives = 174/274 (63.50%), Query Frame = 1
Query:   46 FLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQAAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKYR--PGGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGLSEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTG-SEPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSEHPIPPTMIQVFRNVVQTSGW-RGLFRALPLNYAKGPLAVAISFTT 855
             +SG +AG+VAK+A+APLDR KIIF  SS++FS + A   +   +  EGL  LWRGN AT+ RV PYA IQ+       K L  Y    G  L    RL AG+ AG  + ++T PLD  RAR+AV  P  ++  + +  V   M R  G++ LYR   PT+LG+IPY+G+SF T+ETLK+   +++G ++P+ L+RL FGA AGL+GQ+AS+P+DV RRRMQT   T       T++   R VV   G  RGL++ L +N+ KGP+AV ISFTT
Sbjct:   52 LMSGALAGAVAKTAVAPLDRTKIIFQVSSNRFSAKEAYKLIYHTYRNEGLLSLWRGNSATMVRVIPYAAIQFCAHEQYKKRLGSYYGFQGNALTPIPRLLAGSLAGTTATMITYPLDLVRARMAVT-PKEMY--SNIIHVFIRMSREEGLKSLYRGFNPTILGVIPYAGISFFTYETLKKLHAEQSGRTQPSPLERLLFGACAGLLGQSASYPLDVVRRRMQTAGITGH--TYGTIVSTMREVVAEEGVIRGLYKGLSMNWVKGPVAVGISFTT 320          
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Match: A0A3B3SE67_9TELE (Solute carrier family 25 member 42 n=4 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SE67_9TELE)

HSP 1 Score: 216 bits (549), Expect = 3.620e-65
Identity = 129/286 (45.10%), Postives = 180/286 (62.94%), Query Frame = 1
Query:   13 GERVGRNRVLAFLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQAAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKYRP---GGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGLSEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTG-SEPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSEHPIPPTMIQVFRNVVQTSGW-RGLFRALPLNYAKGPLAVAISFTT 855
            G R G + V +  SG +AG+VAK+A+APLDR KI+F  SS++FS + A   +   +  +G   LWRGN AT+ RV PYA IQ+       K +  + P      L    RL AG+ AG  ++++T PLD  RAR+AV  P  ++G   +S+V   +WR  G + LYR  TPT+LG++PY+GLSF T+ETLK+   +K+G ++P T +RLAFGA AGL+ Q+AS+P+DV RRRMQT   T       T++     +V   G  RGL++ L +N+ KGPLAV ISFTT
Sbjct:   28 GYRQGLSVVNSLASGALAGAVAKTAVAPLDRTKIMFQVSSNRFSAKEAYKFIYRTYQTQGFFSLWRGNSATMVRVVPYAAIQFCAHEQY-KGILGHPPVLSAASLTPIPRLVAGSLAGMTASMITYPLDLVRARMAVT-PKEMYGN--ISDVFVRIWREEGPKTLYRGFTPTILGVVPYAGLSFFTYETLKKLHAEKSGRTKPHTYERLAFGACAGLIAQSASYPLDVVRRRMQTAGVTGHS--YSTILGTMHQIVTEEGLVRGLYKGLSMNWVKGPLAVGISFTT 307          
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Match: A0A6P6QJZ0_CARAU (mitochondrial coenzyme A transporter SLC25A42 n=33 Tax=Otophysi TaxID=186626 RepID=A0A6P6QJZ0_CARAU)

HSP 1 Score: 216 bits (549), Expect = 4.060e-65
Identity = 131/287 (45.64%), Postives = 183/287 (63.76%), Query Frame = 1
Query:   13 GERVGRNRVLAFLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQAAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKYR--PGGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGLSEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTG-SEPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSE--HPIPPTMIQVFRNVVQTSGW-RGLFRALPLNYAKGPLAVAISFTT 855
            G + GR+ + + LSG +AG+VAK+A+APLDR KIIF  SS++FS + A   +   + ++G   LWRGN AT+ RV PYA IQ+       + L +Y    G  L    RL AG+ AG  +A++T PLD  RAR+AV  P  ++  + +  V   + R  G++ LYR  TPT+LG++PY+GLSF T+ETLK+   + TG S+P + +RLAFGA AGL+GQ+AS+P+DV RRRMQT   T      I  TM    R +V+  G  RGL++ L +N+ KGP+AV ISF T
Sbjct:   31 GFKPGRSVLNSLLSGALAGAVAKTAVAPLDRTKIIFQVSSNRFSAKEAYRLIYRTYLKDGFFSLWRGNSATMVRVIPYAAIQFCAHEQYKRILGQYYGFQGKALPPVPRLLAGSLAGTTAAMITYPLDMVRARMAVT-PKEMY--SNILHVFVRISRDEGLKTLYRGFTPTILGVVPYAGLSFFTYETLKKLHAEHTGRSQPFSYERLAFGACAGLIGQSASYPLDVVRRRMQTAGVTGHTYSSISGTM----REIVREEGVIRGLYKGLSMNWVKGPIAVGISFMT 310          
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Match: S2542_DANRE (Mitochondrial coenzyme A transporter SLC25A42 n=4 Tax=Danio rerio TaxID=7955 RepID=S2542_DANRE)

HSP 1 Score: 215 bits (548), Expect = 4.550e-65
Identity = 128/285 (44.91%), Postives = 179/285 (62.81%), Query Frame = 1
Query:   13 GERVGRNRVLAFLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQAAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKYR--PGGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGLSEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTG-SEPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSEHPIPPTMIQVFRNVVQTSGW-RGLFRALPLNYAKGPLAVAISFTT 855
            G + GR+ + + +SG  AG+VAK+A+APLDR KIIF  SS++FS + A   +   + ++G   LWRGN AT+ RV PYA IQ+         L KY    G  L    RL AG+ AG  +A++T PLD  RAR+AV  P  ++  + + +V   + R  G++ LYR  TPT+LG++PY+GLSF T+ETLK+   +KTG + P   +RL FGA AGL+GQ+AS+P+DV RRRMQT   T       T++   R +V   G  RGL++ L +N+ KGP+AV ISF T
Sbjct:   28 GFKQGRSVLNSLVSGAFAGAVAKTAVAPLDRTKIIFQVSSNRFSAKEAYRLIYRTYLKDGFFSLWRGNSATMVRVIPYAAIQFCAHEQYKGILGKYYGFQGKALPPVPRLLAGSLAGTTAAIITYPLDMVRARMAVT-PKEMY--SNIMDVFVRISREEGLKTLYRGFTPTILGVVPYAGLSFFTYETLKKTHAEKTGRAHPFPYERLVFGACAGLIGQSASYPLDVVRRRMQTAGVTGH--TYSTVLGTMREIVAEEGIVRGLYKGLSMNWVKGPIAVGISFMT 307          
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Match: W5KGZ2_ASTMX (Solute carrier family 25 member 42 n=4 Tax=Ostariophysi TaxID=32519 RepID=W5KGZ2_ASTMX)

HSP 1 Score: 215 bits (547), Expect = 6.820e-65
Identity = 128/285 (44.91%), Postives = 180/285 (63.16%), Query Frame = 1
Query:   13 GERVGRNRVLAFLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQAAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKYR--PGGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGLSEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTGS-EPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSEHPIPPTMIQVFRNVVQTSGW-RGLFRALPLNYAKGPLAVAISFTT 855
            G + GR+ + + LSG +AG+VAK+A+APLDR KIIF  SS++FS + A   +   + ++G   LWRGN AT+ RV PYA IQ+       + L  Y    G  L    RL AG+ AG  +A +T PLD  RAR+AV  P  ++  + +  V   + R  G++ LYR  TPT+LG++PY+GLSF T+ETLK+   +KTG  +P + +RLAFGA AGL+GQ++S+P+DV RRRMQT   T       T++   R +V   G  RGL++ L +N+ KGP+AV ISF T
Sbjct:   28 GFKQGRSVLNSLLSGALAGAVAKTAVAPLDRTKIIFQVSSNRFSAKEAYRLIYRTYRKDGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKRLLGGYYGFQGKALPPVPRLLAGSLAGTTAASLTYPLDMVRARMAVT-PKEMY--SNILHVFVRISREEGLKTLYRGFTPTILGVVPYAGLSFFTYETLKKLHAEKTGRPQPYSFERLAFGACAGLIGQSSSYPLDVVRRRMQTAGVTGH--TYGTILGTMREIVAEEGVIRGLYKGLSMNWVKGPIAVGISFMT 307          
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Match: A0A3Q2SRA5_FUNHE (Mitochondrial coenzyme A transporter SLC25A42-like n=3 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3Q2SRA5_FUNHE)

HSP 1 Score: 215 bits (548), Expect = 7.650e-65
Identity = 131/288 (45.49%), Postives = 184/288 (63.89%), Query Frame = 1
Query:    4 SESGERVGRNRVLAFLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQAAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKYR--PGGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGLSEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTG-SEPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSEHPIPPTMIQVFRNVVQTSGW-RGLFRALPLNYAKGPLAVAISFTT 855
            S  G +  R+ + +  SG +AG+VAK+A+APLDR KIIF  SS++FS + A   +   + ++GL  LWRGN AT+ RV PYA IQ+       + L +Y    GG L    RL AG+ AG  +A+VT PLD  RAR+AV  P  ++  + +  V   + R  G++ +YR  +PT+LG+IPY+GLSF T+ETLK+   + +G S+P + +RLAFGA AGLV Q+AS+P+DV RRRMQT   T       T++   +++V   G  RGLF+ L +N+ KGPLAV ISFTT
Sbjct:   39 SYEGIKQTRSILNSLFSGALAGAVAKTAVAPLDRTKIIFQVSSARFSAKEAYKLIYRTYLKDGLFSLWRGNSATMVRVIPYAAIQFCAHEQYKRLLGEYYGFQGGVLPPVPRLVAGSMAGTTAAMVTYPLDMVRARMAVT-PKEMY--SNIVHVFVRISREEGLKTVYRGFSPTILGVIPYAGLSFFTYETLKKLHAEHSGRSQPYSYERLAFGACAGLVSQSASYPLDVVRRRMQTAGVTGH--TYGTILGTIKDIVSEEGVVRGLFKGLSMNWVKGPLAVGISFTT 321          
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Match: A0A8C5EC32_9TELE (Solute carrier family 25 member 42 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5EC32_9TELE)

HSP 1 Score: 214 bits (546), Expect = 1.150e-64
Identity = 129/280 (46.07%), Postives = 175/280 (62.50%), Query Frame = 1
Query:   28 RNRVLAFLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQAAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKYR--PGGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGLSEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTG-SEPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSEHPIPPTMIQVFRNVVQTSGW-RGLFRALPLNYAKGPLAVAISFTT 855
            R  V + L G  AG+VAK+ IAPLDR KIIF  SS +FS Q A   +   + +EGL  LWRGN AT+ RV PYA IQ+ +     K L  +    G  L    RL AG+ AG  +A++T PLDT RAR+AV         + +  V   + +  G++ LYR  TPT+LG+IPY+G++F T+ETLK+R  ++T  S+P   +RLAFGA AGL+GQ+AS+P+DV RRRMQT   T    +  T+I   R +V   G  RGL++ L +N+ KGP+AV +SFTT
Sbjct:   36 RMAVDSLLCGAFAGAVAKTVIAPLDRTKIIFQVSSDRFSAQKAFRLIYCTYMKEGLLSLWRGNSATMVRVMPYAAIQFCSHEQYKKLLGSHYGFQGKALPPVPRLLAGSLAGTTAAMLTYPLDTVRARMAVTAKEMY---SNIMHVFVRISQEEGVKTLYRGFTPTILGVIPYAGITFFTYETLKKRHTERTKRSQPYPYERLAFGACAGLIGQSASYPLDVVRRRMQTAGVTGSSYV--TIIGTMRAIVTQEGVVRGLYKGLSMNWIKGPVAVGVSFTT 310          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85689.19978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8C9RF67_SCLFO1.900e-6746.67Solute carrier family 25 member 42 n=2 Tax=Sclerop... [more]
W5UJP0_ICTPU1.140e-6545.61Mitochondrial coenzyme A transporter SLC25A42 n=7 ... [more]
A0A3B4D6T6_PYGNA1.210e-6544.56Solute carrier family 25 member 42 n=6 Tax=Clupeoc... [more]
A0A8C5WGS0_9ANUR1.320e-6546.35Solute carrier family 25 member 42 n=2 Tax=Leptobr... [more]
A0A3B3SE67_9TELE3.620e-6545.10Solute carrier family 25 member 42 n=4 Tax=Paramor... [more]
A0A6P6QJZ0_CARAU4.060e-6545.64mitochondrial coenzyme A transporter SLC25A42 n=33... [more]
S2542_DANRE4.550e-6544.91Mitochondrial coenzyme A transporter SLC25A42 n=4 ... [more]
W5KGZ2_ASTMX6.820e-6544.91Solute carrier family 25 member 42 n=4 Tax=Ostario... [more]
A0A3Q2SRA5_FUNHE7.650e-6545.49Mitochondrial coenzyme A transporter SLC25A42-like... [more]
A0A8C5EC32_9TELE1.150e-6446.07Solute carrier family 25 member 42 n=1 Tax=Gouania... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85689contigM-pyrifera_M_contig85689:2..856 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score219.9
Seed ortholog evalue1.5e-54
Seed eggNOG ortholog7955.ENSDARP00000112426
Preferred nameSLC25A42
KEGG koko:K15085
KEGG TC2.A.29.12.2
Hectar predicted targeting categoryother localisation
GOsGO:0000295,GO:0003674,GO:0003824,GO:0005215,GO:0005346,GO:0005347,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006839,GO:0006855,GO:0006862,GO:0006996,GO:0007005,GO:0007006,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0009987,GO:0015075,GO:0015101,GO:0015215,GO:0015216,GO:0015217,GO:0015228,GO:0015238,GO:0015291,GO:0015297,GO:0015605,GO:0015695,GO:0015711,GO:0015748,GO:0015865,GO:0015866,GO:0015867,GO:0015868,GO:0015880,GO:0015893,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0019866,GO:0022804,GO:0022857,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031966,GO:0031967,GO:0031975,GO:0032592,GO:0034220,GO:0035349,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043262,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0050896,GO:0051179,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0051503,GO:0055085,GO:0061024,GO:0071077,GO:0071106,GO:0071702,GO:0071705,GO:0071840,GO:0072530,GO:0080121,GO:0080122,GO:0098573,GO:0098655,GO:0098656,GO:1901264,GO:1901505,GO:1901679,GO:1990542
EggNOG free text desc.Solute carrier family 25 member 42
EggNOG OGs39FP7@33154,3BBHJ@33208,3CWDP@33213,483M9@7711,4923C@7742,4A1JY@7898,KOG0752@1,KOG0752@2759
COG Functional cat.C
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size855
Cds size855
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816767.02544-CDS-M-pyrifera_M_contig85689:1..8561622816767.02544-CDS-M-pyrifera_M_contig85689:1..856Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85689 2..856 -
1692278166.2406967-CDS-M-pyrifera_M_contig85689:1..8561692278166.2406967-CDS-M-pyrifera_M_contig85689:1..856Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85689 2..856 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85689.19978.1prot_M-pyrifera_M_contig85689.19978.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85689 2..856 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85689.19978.1

>prot_M-pyrifera_M_contig85689.19978.1 ID=prot_M-pyrifera_M_contig85689.19978.1|Name=mRNA_M-pyrifera_M_contig85689.19978.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=285bp
VSESGERVGRNRVLAFLSGGIAGSVAKSAIAPLDRVKIIFMTSSSKFSFQ
AAGAQLRAIWNREGLRGLWRGNFATVTRVYPYAGIQYVTFGMMTKTLTKY
RPGGRLRARDRLFAGACAGAMSALVTLPLDTARARLAVYHPGHVHGRNGL
SEVLTDMWRGGGMRGLYRALTPTLLGIIPYSGLSFATFETLKQRERDKTG
SEPTTLQRLAFGATAGLVGQTASFPIDVCRRRMQTFVPTSEHPIPPTMIQ
VFRNVVQTSGWRGLFRALPLNYAKGPLAVAISFTT
back to top

mRNA from alignment at M-pyrifera_M_contig85689:2..856-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85689.19978.1 ID=mRNA_M-pyrifera_M_contig85689.19978.1|Name=mRNA_M-pyrifera_M_contig85689.19978.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=855bp|location=Sequence derived from alignment at M-pyrifera_M_contig85689:2..856- (Macrocystis pyrifera P11B4 male)
GTTTCGGAAAGCGGAGAACGCGTTGGAAGGAATCGTGTGCTTGCTTTCCT TAGTGGGGGTATAGCTGGTAGTGTAGCAAAGTCTGCGATTGCACCGTTGG ATCGTGTGAAGATTATATTCATGACTTCTTCATCAAAGTTTTCTTTTCAA GCCGCTGGGGCACAATTGAGGGCGATTTGGAACCGTGAAGGGCTACGAGG ATTGTGGCGAGGGAACTTTGCGACCGTGACGAGGGTGTATCCATACGCAG GGATTCAATACGTCACGTTTGGCATGATGACAAAAACGCTGACCAAGTAT CGTCCTGGTGGGCGTTTGAGGGCGCGTGATCGGTTGTTTGCTGGTGCTTG TGCTGGTGCAATGTCGGCACTTGTCACACTTCCTTTAGATACGGCTCGTG CACGTCTGGCAGTGTACCATCCCGGTCATGTGCATGGTCGTAACGGATTG AGTGAAGTATTGACGGACATGTGGCGTGGTGGAGGGATGCGTGGATTATA TCGCGCATTGACTCCTACCTTACTTGGTATCATTCCGTATTCTGGCCTTT CTTTTGCTACGTTTGAAACTCTGAAACAAAGAGAACGCGACAAAACTGGC AGCGAGCCAACCACTCTCCAACGGCTTGCATTTGGTGCCACTGCGGGTCT TGTTGGCCAAACTGCTTCCTTCCCCATTGACGTGTGTCGAAGGCGCATGC AAACGTTTGTTCCAACATCCGAGCATCCCATTCCACCAACAATGATCCAA GTCTTTCGAAACGTTGTTCAAACTTCTGGTTGGAGAGGCCTCTTTCGAGC CCTTCCTCTGAATTACGCCAAAGGCCCTCTTGCTGTTGCCATTTCTTTCA CAACC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig85689:2..856-

>mRNA_M-pyrifera_M_contig85689.19978.1 ID=mRNA_M-pyrifera_M_contig85689.19978.1|Name=mRNA_M-pyrifera_M_contig85689.19978.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1710bp|location=Sequence derived from alignment at M-pyrifera_M_contig85689:2..856- (Macrocystis pyrifera P11B4 male)
GTTTCGGAAAGCGGAGAACGCGTTGGAAGGAATCGTGTGCTTGCTTTCCT
TAGTGGGGGTATAGCTGGTAGTGTAGCAAAGTCTGCGATTGCACCGTTGG
ATCGTGTGAAGATTATATTCATGACTTCTTCATCAAAGTTTTCTTTTCAA
GCCGCTGGGGCACAATTGAGGGCGATTTGGAACCGTGAAGGGCTACGAGG
ATTGTGGCGAGGGAACTTTGCGACCGTGACGAGGGTGTATCCATACGCAG
GGATTCAATACGTCACGTTTGGCATGATGACAAAAACGCTGACCAAGTAT
CGTCCTGGTGGGCGTTTGAGGGCGCGTGATCGGTTGTTTGCTGGTGCTTG
TGCTGGTGCAATGTCGGCACTTGTCACACTTCCTTTAGATACGGCTCGTG
CACGTCTGGCAGTGTACCATCCCGGTCATGTGCATGGTCGTAACGGATTG
AGTGAAGTATTGACGGACATGTGGCGTGGTGGAGGGATGCGTGGATTATA
TCGCGCATTGACTCCTACCTTACTTGGTATCATTCCGTATTCTGGCCTTT
CTTTTGCTACGTTTGAAACTCTGAAACAAAGAGAACGCGACAAAACTGGC
AGCGAGCCAACCACTCTCCAACGGCTTGCATTTGGTGCCACTGCGGGTCT
TGTTGGCCAAACTGCTTCCTTCCCCATTGACGTGTGTCGAAGGCGCATGC
AAACGTTTGTTCCAACATCCGAGCATCCCATTCCACCAACAATGATCCAA
GTCTTTCGAAACGTTGTTCAAACTTCTGGTTGGAGAGGCCTCTTTCGAGC
CCTTCCTCTGAATTACGCCAAAGGCCCTCTTGCTGTTGCCATTTCTTTCA
CAACCGTTTCGGAAAGCGGAGAACGCGTTGGAAGGAATCGTGTGCTTGCT
TTCCTTAGTGGGGGTATAGCTGGTAGTGTAGCAAAGTCTGCGATTGCACC
GTTGGATCGTGTGAAGATTATATTCATGACTTCTTCATCAAAGTTTTCTT
TTCAAGCCGCTGGGGCACAATTGAGGGCGATTTGGAACCGTGAAGGGCTA
CGAGGATTGTGGCGAGGGAACTTTGCGACCGTGACGAGGGTGTATCCATA
CGCAGGGATTCAATACGTCACGTTTGGCATGATGACAAAAACGCTGACCA
AGTATCGTCCTGGTGGGCGTTTGAGGGCGCGTGATCGGTTGTTTGCTGGT
GCTTGTGCTGGTGCAATGTCGGCACTTGTCACACTTCCTTTAGATACGGC
TCGTGCACGTCTGGCAGTGTACCATCCCGGTCATGTGCATGGTCGTAACG
GATTGAGTGAAGTATTGACGGACATGTGGCGTGGTGGAGGGATGCGTGGA
TTATATCGCGCATTGACTCCTACCTTACTTGGTATCATTCCGTATTCTGG
CCTTTCTTTTGCTACGTTTGAAACTCTGAAACAAAGAGAACGCGACAAAA
CTGGCAGCGAGCCAACCACTCTCCAACGGCTTGCATTTGGTGCCACTGCG
GGTCTTGTTGGCCAAACTGCTTCCTTCCCCATTGACGTGTGTCGAAGGCG
CATGCAAACGTTTGTTCCAACATCCGAGCATCCCATTCCACCAACAATGA
TCCAAGTCTTTCGAAACGTTGTTCAAACTTCTGGTTGGAGAGGCCTCTTT
CGAGCCCTTCCTCTGAATTACGCCAAAGGCCCTCTTGCTGTTGCCATTTC
TTTCACAACC
back to top