mRNA_M-pyrifera_M_contig8535.19893.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Match: A0A6H5JQN2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQN2_9PHAE) HSP 1 Score: 514 bits (1323), Expect = 1.160e-161 Identity = 345/635 (54.33%), Postives = 392/635 (61.73%), Query Frame = 1
Query: 1 MDAASMSAVADALDSKDTKRILQGLETLGEALRKQRHYQQEQRQQSPEQPQ-----IPLDRESWQPVVAPAVRALRDNNHKVCRASLACFEGLV-------------------------GLVGAGILPFLSMVTPAVVECLGNAKAAVQEKGVDLLLAISSTEISGARDTLSAVEPHFR-HKNWRVREHLLVYLGRATEVDPAGV----------------IRNRPPSALAALLSHALNDSASQVRREALSAAVRLMELTGDP----LLVQLEAKGVRSAQLSVLRESCGGGRGSSAALASTXXXXXXXXXARTGVHGLLSPTVATPVPSSRLGTSAAHRGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----RSVLVRAGDGLSEVAKSPA-----SATRSCGGGGAG-----LMSSPAGAGSPGGVGGEESAFSALDPLVPVKVYTERDVRREVDAAKAGLEHGSDWQRWVAAMRRLAGVALGGASTEFPGLLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGSLAELWLPELLRNTTRAVVVAAAGDEAARAVFTCTTDGFPRLLPCLIDIARSKSAAIRRRCLDYLMLALARWSDAAFERYLPQIR 1707
MDA+S+SA A LDSK+TKR LQ LE LGEAL+ Q + S E D SWQ +VAP V LRDNN KVCRASLAC + LV G + I PFLS++TPAVVECLGN+KAAVQEKGVDLLLA+S ++G RDT+S+++ HF H+NWRVRE L+ YLGR E+DPAG+ S LA LL+ ALNDSASQVR+EAL AA R++ + G LL QLEAKGVR LS LR++ G X GLLSP P +SR G XXXXXXXXXXXX SVL RAG G+ +P +A R GG AG + +SP G G GGEESAFSAL+PLV V VYTERDVRREV+A KAGLEH SDWQRWV+AMRRLAGVALGG +EF LL GLVRASV EMVGHKVSENRSAVAREACRCVAVLARCLTDHFG+LAELWLPELLRNTTRAVVVAAAGDEAARA+F CT DGFPRLLP L+D A++KSAAIRRRCLDY +LALA W DAAF+R Q+R
Sbjct: 1 MDASSLSAWASELDSKNTKRRLQALEDLGEALQSQPP------RSSSETASGGGLACNYDDNSWQQIVAPLVHTLRDNNFKVCRASLACLKSLVARVTEHDATRKTAGRTAAAAASGRKGSTNSSITPFLSLITPAVVECLGNSKAAVQEKGVDLLLAVSDPAVAGGRDTVSSLQRHFAGHRNWRVRERLVAYLGRVAELDPAGINSIHXXXXXXXXXXXXAAETESSLLAGLLADALNDSASQVRQEALGAATRVVRMLGGNGGPGLLAQLEAKGVRQVVLSALRDAGSGSATGXXXXXXXXETGSAFTEGAAATAGLLSPITPAPQLASRSGAXXXXXXXXXXXXXXXXXXXXGIANGGGARLTTATRSRRPTAAGKGGRGATTSVLTRAGVGVPGERGAPTPTGGEAAGRGGGGSRAGSPTTLIGNSPRGCAL--GSGGEESAFSALEPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRRLAGVALGGGGSEFSALLAGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAVVVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKNKSAAIRRRCLDYAVLALACWGDAAFDRCAVQLR 627
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Match: A0A835ZF61_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF61_9STRA) HSP 1 Score: 151 bits (381), Expect = 8.710e-35 Identity = 88/193 (45.60%), Postives = 118/193 (61.14%), Query Frame = 1
Query: 1141 FSALDPLVPVKVYTERDVRREVDAAKAGLEHGSDWQRWVAAMRRLAGVALGGA--STEFPGLLVGLVRAS-VQEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGSLAELWLPELLRNTTRAV-VVAAAGDEAARAVFTCTTDGFPRLLPCLIDIARSKSAAIRRRCLDYLMLALARWSDAA-FERYLPQI 1704
F+ L P+ PV+VYTE DV+RE+DA GL+ DW+ WVAA++RLAGVA GGA S V VRAS V V V + RSAV +EACR A + L LAE WLP LLRN + A ++A+ AA ++ T T +GFP+LLP L+ A +K+A +R R + YL LA++ W++ +ER L I
Sbjct: 293 FAKLPPIQPVRVYTEGDVQREIDAVARGLQRADDWEAWVAALQRLAGVARGGAADSAALLAAFVAAVRASGVDAAVAKHVCDLRSAVQKEACRAAAAVVTALGAATAPLAEAWLPALLRNASNAKETISASAHCAAESILTATPEGFPKLLPQLLVGAAAKAAPVRHRSMGYLFLAVSTWAEGGVWERSLGPI 485
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Match: G4ZN56_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZN56_PHYSP) HSP 1 Score: 109 bits (272), Expect = 4.020e-21 Identity = 126/505 (24.95%), Postives = 218/505 (43.17%), Query Frame = 1
Query: 208 LRDNNHKVCRASLACFEGLVGLVGAGIL-PFLSMVTPAVVECLGNAKAAVQEKGVDLLLAISSTEISGARDTLSAVEPHFRHKNWRVREHLLVYLGRATEVDPAGVIRNRPPSALAALLSHALNDSASQVRREALSAAVRLMELTGDPLLVQLEAKGVRSAQLSVLRESCGGGRGSSAALASTXXXXXXXXXARTGVHGLLSPTVATPVPS------SRLGTSAAHRGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSVLVRAGDGLSEVAKSPASATRSCGGGGAGLMSSPAGAGSPGGVGGEESAFSALDPLVPVKVYTERDVRREVDAAKAGLEHGSDWQRWVAAMRRLAGVALGGASTEFPGLLVGLVRA--SVQEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGSLAELWLPELLRNTTRAV-VVAAAGDEAARAVFTCTTDGFPRLLPCLIDIARSKSAAIRRRCLDYLMLALARWSDAAFERY 1692
LRD+N K+ +L + LV V L + ++ ++VE LG++K V+EK VD+++ IS + L ++ HKNWR RE L + R E + + + L +L L DS+ VR A++A + G LL LE K +RSAQ+ L + R V G S ++ PS AA + A++V +GDG + + S AS+T S ++ + AG+ G GG+ S E+++++++ L ++W + V ++ L +A S G+L L + ++E + +VS+ RS+V+REAC+ + LA L D F + AE+ L LL+ T + V++ + D R++ T++G+ R++P LI+ A+S++ +R + YL + L RWS + ++
Sbjct: 48 LRDHNSKIALGALEILQLLVSRVAESTLRSYFKLLWLSLVERLGDSKLPVREKAVDVVVEISV--VLDVNTVLDKLKGCMGHKNWRTREQSLHAVWRCLERHE--LFKEKQDELLDDVLK-LLGDSSKDVRDAAITALEKFYMYIGASLLSDLEYKNIRSAQVKTLTDR----------------------FERIPVRGKESHSITHTAPSYDDRSNQDFDDDAAQDNAAPQKYSSILSSYDLQVSSSSSSIARYLASVRSRTINEAKAVAHVSGDG--DRSPSQASSTSSK------VVQDFSTAGTFGSGGGDIS---------------EKEIQKQLGVIFDKLNLDNNWDKRVDGLKMLQKLAKRCGSASNSGVLPFLSQGLRPIRERLCQQVSDLRSSVSREACQTIQTLANSLRDEFNAHAEICLGNLLKATYVTIQVISTSADTTIRSMIESTSNGYARVIPKLIECAKSRNQVLRYNAVCYLTMTLQRWSTSFLSKH 502
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Match: A0A4D9CV68_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV68_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.550e-21 Identity = 63/184 (34.24%), Postives = 105/184 (57.07%), Query Frame = 1
Query: 1159 LVPVKVYTERDVRREVDAAKAGLEHGSD-WQRWVAAMRRLAGVALGGASTEFPGLLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGSLAELWLPELLRNTTRAV-VVAAAGDEAARAVFTCTTDGFPRLLPCLIDIARSKSAAIRRRCLDYLMLALARWSDAAFERYLPQI 1704
+V V V +++++ +E+ + GL D WQ AA+ R+ G+A+GG P + GL ++Q++ ++ RS ++RE C VA+LA+ L D LA+LW P +L+ T + V+A + D+ R + +CT GFPRLLP L++ SK+ R RC+ + LAL W +F+R + +
Sbjct: 352 VVSVAVRSDKELAQEMQSIAVGLAASEDDWQVRTAALHRVQGLAVGGGG-RLPTFVPGL--RAIQQLFTQQILSLRSTLSREGCLTVAILAQVLGDDMLPLADLWAPAVLKTTQVNISVMALSADQCLRCLVSCTRQGFPRLLPILLEGTTSKNDTERLRCVTAITLALWHWDAVSFDRAVDAV 532
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Match: A0A1Y1IMC3_KLENI (CLIP-associating protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMC3_KLENI) HSP 1 Score: 104 bits (259), Expect = 1.660e-19 Identity = 125/501 (24.95%), Postives = 205/501 (40.92%), Query Frame = 1
Query: 208 LRDNNHKVCRASLACFEGLVGLVGAGILPFLSMVTPAVVECLGNAKAAVQEKGVDLLLAISSTEISGARDTLSAVEPHFRHKNWRVREHLLVYLGRATEVDPAGVIRNRPPSALAALLSHALNDSASQVRREALSAAVRLMELTGDPLLVQLEAKGVRSAQLSVLRESCGGGR------GSSAALASTXXXXXXXXXARTGVHGLLSPTVATPVPSSRLGTSAAHRGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSVLVRAGDGLSEVAKSPASATRSCGGGGAGLMSSPAGAGSPGGVGGEESAFSALDPLVPVKVYTERDVRREVDAAKAGLEHGSDWQRWVAAMRRLAGVALGGAST--EFPGLLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGSLAELWLPELLRNTTRAV-VVAAAGDEAARAV-FTCTTDGFPRLLPCLIDIA-RSKSAAIRRRCLDYLMLALARWSDA 1677
L+DNN KVC L V G L+ + P V+E LG+ K V+E G LLLA+ ++ + + HKNWRV+E A + G+ + + + L DS S VR +++ L G PLL +L+ +R AQL + GR S ++A+ A G H PS R T+ +H + LV +E AKS +++ R GL A + P+ P+K+Y+E+++ +E++ A L DW + AM+RL G+ LGGA+ FP LL + E + ++++ RS++ + AC + +LA+ + F S AE ++P L + V ++A + D + + + C R+LP +ID A R ++ +R +C Y +L L +W +A
Sbjct: 46 LKDNNFKVCHGILLVLTKAVPSSGEHFKHQLNALLPGVIERLGDGKQPVREAGRRLLLALMEA-LTPVLIFDKIGDSAWGHKNWRVKEEFTRTCAAALSLF--GLSKLPVHKLILPSVLKLLEDSNSGVREASMACIEELFRHMGGPLLSELQRFSIRPAQLKDIT-----GRLEQIKPPPSVSIATKPLQRAATAPATAGRHQS---------PSKRAPTAESH---------------------------------GPSQTNGVQRTLVFGTGPRTESAKSASTSGR-------GLTDDDVA---------RYLAATCEKPVTPIKIYSEKELAKEIEKAATILVPEKDWSARMTAMQRLCGLVLGGAAELESFPSLL-----KQLWEPLDTQLADRRSSIVKLACHLLMLLAQEMHLDFESSAEHFMPSLFKLVVITVLIIAESADSCIKTLLYFCRC---ARILPKMIDTAMRDRAGVLRTKCCGYALLILDQWREA 472
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Match: A0A6G0XDU9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDU9_9STRA) HSP 1 Score: 102 bits (254), Expect = 5.900e-19 Identity = 56/172 (32.56%), Postives = 99/172 (57.56%), Query Frame = 1
Query: 1177 YTERDVRREVDAAKAGLEHGSDWQRWVAAMRRLAGVALGGASTEFPGLLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGSLAELWLPELLRNTTRAV-VVAAAGDEAARAVFTCTTDGFPRLLPCLIDIARSKSAAIRRRCLDYLMLALARWSDAAFER 1689
+++R++ E+ GL S+W R V AM+RL + GGA+ + + +R ++E + +V + RSAV REAC +AV+A + D F + AE ++ LL++T + ++A + D +++ T G+P+++ LID ARS++ +R C+DYL +A + W ER
Sbjct: 268 FSDRELTSELQRVTQGLTPDSEWSRRVEAMQRLQALVAGGAALQ--PIFASTLR-QLRETLCEQVGDLRSAVLREACTTIAVIANAMGDAFNTHAEFFVAALLKSTIVTIQIIAVSADSCLKSIVRSTQTGYPKVMTKLIDGARSRNQVLRLHCVDYLTMAFSLWHVVVLER 436
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Match: A0A371EDS2_MUCPR (CLIP-associated protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371EDS2_MUCPR) HSP 1 Score: 99.0 bits (245), Expect = 7.900e-18 Identity = 59/175 (33.71%), Postives = 102/175 (58.29%), Query Frame = 1
Query: 1165 PVKVYTERDVRREVDAAKAGLEHGSDWQRWVAAMRRLAGVALGGASTEFPGLLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGSLAELWLPELLRNTTRAV-VVAAAGDEAARAVF-TCTTDGFPRLLPCLIDIARS-KSAAIRRRCLDYLMLALARWSDAA 1680
P+KVY+E+++ REVD + L DW +AAM+R+ G+ LGGA+ ++P GL++ + + ++S+ RS++ ++AC + L++ L F EL++P LL+ V V+A + D + + C R+LP ++D A++ ++A +R RC DY +L L W DAA
Sbjct: 158 PIKVYSEKELIREVDKIASTLVPEKDWSIRIAAMQRIEGLVLGGAA-DYP-CFFGLLKQQLVGPLSTQLSDRRSSIVKQACHLLCFLSKDLLGDFEQCVELFIPVLLKLVVITVLVIAESADNCIKTMLRNCKV---ARVLPRIVDCAKNDRNAVLRARCCDYALLILEHWPDAA 327
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Match: A0A4D6N2V0_VIGUN (Uncharacterized protein n=3 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6N2V0_VIGUN) HSP 1 Score: 97.8 bits (242), Expect = 1.870e-17 Identity = 62/175 (35.43%), Postives = 102/175 (58.29%), Query Frame = 1
Query: 1165 PVKVYTERDVRREVDAAKAGLEHGSDWQRWVAAMRRLAGVALGGASTEFPGLLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGSLAELWLPELLRNTTRAV-VVAAAGDEAARAVF-TCTTDGFPRLLPCLIDIARS-KSAAIRRRCLDYLMLALARWSDAA 1680
P+KVY+E+++ RE+D A L DW +AAM+R+ G+ LGGA T++P GL++ V + ++S+ RS++ ++AC + L++ L F + AEL++P LL+ V V+A + D + + C R+LP + D A++ +SA +R RC DY +L L W D A
Sbjct: 274 PIKVYSEKELIREIDKIAATLVPEKDWSIRIAAMQRIEGLVLGGA-TDYP-CFFGLLKQLVGPL-STQLSDRRSSIVKQACHLLCFLSKDLLGDFEACAELFIPVLLKLVVITVLVIAESADNCIKTMLRNCKV---ARVLPRVADCAKNDRSAVLRARCCDYALLILEHWPDEA 442
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Match: A0A445AG87_ARAHY (Uncharacterized protein n=5 Tax=Arachis TaxID=3817 RepID=A0A445AG87_ARAHY) HSP 1 Score: 97.8 bits (242), Expect = 1.900e-17 Identity = 61/179 (34.08%), Postives = 100/179 (55.87%), Query Frame = 1
Query: 1156 PLVPVKVYTERDVRREVDAAKAGLEHGSDWQRWVAAMRRLAGVALGGAST--EFPGLLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGSLAELWLPELLRNTTRAV-VVAAAGDEAARAVF-TCTTDGFPRLLPCLIDIARS-KSAAIRRRCLDYLMLALARWSDA 1677
P+ P+KVY+E+++ RE++ L DW +AAM+R+ G+ LGGA+ F GLL LV ++ S+ RS++ ++AC + L++ L F S AE+++P LL+ V V+A + D + + C R+LP + D A++ +S+ +R RC DY +L L W DA
Sbjct: 278 PIDPIKVYSEKELIREIEKIALTLVPEKDWSIRIAAMQRIEGLVLGGATEYQSFSGLLKQLVGPLTTQL-----SDRRSSIVKQACHLLCFLSKDLLGDFESCAEMFIPVLLKLVVITVLVIAESADNCVKTMLRNCKVS---RVLPRIADCAKNDRSSVLRARCCDYALLILEHWPDA 448
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Match: A0A2K1K7V5_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7V5_PHYPA) HSP 1 Score: 97.8 bits (242), Expect = 1.920e-17 Identity = 61/177 (34.46%), Postives = 104/177 (58.76%), Query Frame = 1
Query: 1156 PLVPVKVYTERDVRREVDAAKAGLEHGSDWQRWVAAMRRLAGVALGGASTEFPGLLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGSLAELWLPELLRNTTRAV-VVAAAGDEAARAVFT-CTTDGFPRLLPCLIDIAR-SKSAAIRRRCLDYLMLALARWSDA 1677
P P++V++ERD+ +E + A + L DW ++AMRR+ G+ +GGA T++ G L L++ V + ++++ RS++ ++AC+ + VL + L F AE +LP L + V V+A + D +++ C RLLP ++D A+ +SA +R RC +YL+L L RW DA
Sbjct: 294 PADPIRVFSERDLAKEFEKAASMLAPTQDWSIRMSAMRRIEGIVVGGA-TKYSGFLQ-LLKQLVNPLCD-QLADRRSSIVKQACQLLKVLTKELKSDFDVFAETFLPVLFKLVVITVLVIAESADACIKSMLQHCKV---ARLLPKMVDFAKHDRSAVLRARCCEYLLLVLERWFDA 464 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8535.19893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8535.19893.1 >prot_M-pyrifera_M_contig8535.19893.1 ID=prot_M-pyrifera_M_contig8535.19893.1|Name=mRNA_M-pyrifera_M_contig8535.19893.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=569bp MDAASMSAVADALDSKDTKRILQGLETLGEALRKQRHYQQEQRQQSPEQPback to top mRNA from alignment at M-pyrifera_M_contig8535:3142..10200+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8535.19893.1 ID=mRNA_M-pyrifera_M_contig8535.19893.1|Name=mRNA_M-pyrifera_M_contig8535.19893.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7059bp|location=Sequence derived from alignment at M-pyrifera_M_contig8535:3142..10200+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8535:3142..10200+ >mRNA_M-pyrifera_M_contig8535.19893.1 ID=mRNA_M-pyrifera_M_contig8535.19893.1|Name=mRNA_M-pyrifera_M_contig8535.19893.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3414bp|location=Sequence derived from alignment at M-pyrifera_M_contig8535:3142..10200+ (Macrocystis pyrifera P11B4 male)back to top |