mRNA_M-pyrifera_M_contig85309.19887.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85309.19887.1
Unique NamemRNA_M-pyrifera_M_contig85309.19887.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Match: A0A5A8EH26_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EH26_CAFRO)

HSP 1 Score: 354 bits (909), Expect = 2.340e-108
Identity = 183/292 (62.67%), Postives = 214/292 (73.29%), Query Frame = 1
Query:    1 WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEACNLPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYFVSDPDLLDILSNGSNPRKVMRHVTKIFLATGKIVLDE-----------------RPTAKRFITCVGKEDLPFDPPVQLNGKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRRDDGAAEDPAQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTRTKLAKSDRSRIMCAITLDAHGRDVL 825
            W+YLEPLF+ SDEVK+ELPE S  FAGG ADV EIL  AG T NVKEACN+PGL KRLE LLALLE+CKKALDDFLAGKRA+FPRFYFVSDPDLLDILSNG+ P  V+RHVTKIFLA     ++                  RPTAK++++CVG+ED+ FDPP  L GKVE+YLQV LD +R TL + L  ++ R  ++ R EW+MDRRDDG A DPAQ+SLLV GMDY   VE  F  L  GD + L    ++  A L +LIRLTRTKLAK+DR RIMC IT+DAHGRDVL
Sbjct: 1042 WKYLEPLFMRSDEVKKELPEASALFAGGDADVREILLKAGTTGNVKEACNVPGLTKRLEDLLALLERCKKALDDFLAGKRAQFPRFYFVSDPDLLDILSNGNFPDNVLRHVTKIFLAVDSFGVEAPAGGXXXXXXXXXXXXXRPTAKKWVSCVGEEDVEFDPPFVLKGKVEEYLQVSLDNMRDTLTRRLVSSVGRRHSQSRVEWIMDRRDDGFASDPAQVSLLVAGMDYTHDVEGGFASLAAGDPDGLINARSKVKADLGDLIRLTRTKLAKADRKRIMCLITIDAHGRDVL 1333          
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Match: A0A7S2QUS9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUS9_9STRA)

HSP 1 Score: 290 bits (741), Expect = 8.400e-86
Identity = 148/279 (53.05%), Postives = 198/279 (70.97%), Query Frame = 1
Query:    1 WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEACNLPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYFVSDPDLLDILSNGSNPRKVMRHVTKIFLATGKIVLDE----RPTAKRFITCVGKEDLPFDPPVQLNGKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRRDDGAAEDPAQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTRTKLAKSDRSRIMCAITLDAHGRDVL 825
            W YLEPLF+GSDEVK+ELP D++RFA   A V +IL    + KNVKEAC   GL+ +LE L    E CKK+L DFL GKR  FPRFYF S+ DLLDILSNGS P K+MRHV K+FLAT  + L+E    RP AK+FI  VG+ED+ F+P V L GKVE YLQ++L+     L K LD++++ +P   RT+WLM  +  G  +DPAQIS+LV  + YV+ V + F KL  G+A++  +Y++  I +LN+LI+LT+T L+K+DR+R+M  IT+D+H RDV+
Sbjct: 1006 WSYLEPLFIGSDEVKKELPADAKRFASIDAQVRQILKKCFSIKNVKEACTQSGLLNKLESLQNDQEICKKSLSDFLDGKRRLFPRFYFTSEADLLDILSNGSMPVKIMRHVDKVFLATRALELEEAPGMRPKAKKFIAGVGQEDVDFEPYVPLEGKVEIYLQLVLENQVAALRKKLDKSMKNYPNMGRTDWLM-HKFQGRPDDPAQISILVAAIQYVQEVYDCFDKLSKGNASSFEDYNSLQIQQLNDLIKLTQTDLSKADRTRVMVMITMDSHSRDVI 1283          
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Match: F0Y0Z0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0Z0_AURAN)

HSP 1 Score: 283 bits (724), Expect = 1.610e-83
Identity = 145/283 (51.24%), Postives = 195/283 (68.90%), Query Frame = 1
Query:    1 WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEACNLPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYFVSDPDLLDILSNGSNPRKVMRHVTKIFLATGKIVLD-------ERPTAKRFITCVGKEDLPFDPPVQLNGKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRRDDGAAE-DPAQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTRTKLAKSDRSRIMCAITLDAHGRDVL 825
            W YLEPLF+ SDEVKRELP D+ERFAG   ++ ++L +A   KN+KEACN+ GL+ RLEG L  L+ CKK+L DFL G+R +FPR+YF S+ DLLDILSNGS P KVM H +KI+L+T  + LD        RP A  ++  VGKE  PF+P V L GKVE Y+Q +LD ++ TL + L R++ R+    R  W+M + +DGA   DPAQI LL   ++YV+ VEE+F K+E G+  AL EY+   I +L +L+RLT+  L   +R+RIM  IT+DAHGRD++
Sbjct: 1045 WSYLEPLFIHSDEVKRELPVDAERFAGIDVEIKDVLTSAWEVKNIKEACNVDGLLSRLEGELGGLDLCKKSLADFLDGRRRQFPRYYFTSEADLLDILSNGSQPEKVMIHTSKIYLSTKTLRLDPENRTASNRPMAVGWVADVGKEYTPFEPAVPLEGKVEIYMQTVLDAMKSTLFQNLKRSVIRYAQMERKHWVMAKDEDGARPADPAQIILLTLAINYVQEVEESFEKIEAGNEAALAEYNVLQIDQLGDLVRLTQGDLDGENRTRIMVCITMDAHGRDIV 1327          
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Match: F0YNI2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNI2_AURAN)

HSP 1 Score: 282 bits (722), Expect = 2.960e-83
Identity = 147/280 (52.50%), Postives = 189/280 (67.50%), Query Frame = 1
Query:    1 WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEACNLPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYF-VSDPDLLDILSNGSNPRKVMRHVTKIFLATGKIVL----DERPTAKRFITCVGKEDLPFDPPVQLNGKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRRDDGAAEDPAQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTRTKLAKSDRSRIMCAITLDAHGRDVL 825
            W YLEPLF+GSDEVKRELPE++ RFA     V  IL      +NVK+AC   GL++RLE +    + CKKAL DFLAGKR  FPR+   V + DLLDILSNGS+P KVMRH+ K+ LAT ++ L    D RP A  F++ +G+E + F+P V L GKVE YLQ IL     TL K L+R+ +R+P +PRTEW +D   DG + DPAQI+LLV G+  V GVE+A   +E G+ANAL+ Y+      L +L+RLT+T L   +R R+MC IT+DAH RDVL
Sbjct:  429 WSYLEPLFIGSDEVKRELPEEAVRFASIDQQVRTILKNMAEIRNVKQACQQSGLLQRLESMNTDQDVCKKALADFLAGKRRIFPRYVVDVCEADLLDILSNGSSPHKVMRHIDKVLLATARLQLENVPDSRPRATIFVSGIGEEQVDFEPAVPLEGKVEVYLQTILTAQVETLQKNLERSRKRYPLRPRTEWFLDANADGQSSDPAQIALLVAGIQSVLGVEDAMDSIEQGEANALQVYADRQRQDLVDLVRLTQTNLKGGERQRVMCLITMDAHTRDVL 708          
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Match: A0A836CGE4_9STRA (Dynein heavy chain family dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGE4_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.390e-82
Identity = 146/285 (51.23%), Postives = 198/285 (69.47%), Query Frame = 1
Query:    1 WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEACNLPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYFVSDPDLLDILSNGSNPRKVMRHVTKIFLATGKIVLDE-------RPTAKRFITCVGKEDLPFDPPVQLNGKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRR---DDGAAEDPAQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTRTKLAKSDRSRIMCAITLDAHGRDVL 825
            W YLEPLF+GS+EVKRELPED+ RFAG   DV  +L T   TKN+K ACNL G + +LEG+   LE CKK+L DFL G+R +FPR+YFVS+ DLLDILSNG +P KV+ H  K++L+T  +VL +       RP A R I+ VG E++ F+PPV L GKVE Y+Q +L  ++ +L + L R+L R+    R +WLM ++   D G+  DPAQI LL   ++YV  VEEAF  +  G+A ALREY+   + +L++LIRLT++ L + DR+R+M  IT+DAHGRDV+
Sbjct:  870 WSYLEPLFIGSEEVKRELPEDALRFAGIDEDVKSVLNTFWETKNIKAACNLEGYLAKLEGIGVQLELCKKSLADFLDGRRRQFPRYYFVSEADLLDILSNGGDPTKVLVHTPKVYLSTKTLVLSDDVSPTTGRPRAMRLISGVGSEEMAFEPPVPLEGKVEIYMQDVLGAMKRSLFENLKRSLTRYQQMSRPDWLMHKQPGTDQGS--DPAQIVLLSLAVNYVSEVEEAFYAMAKGNAAALREYNVRQMNQLSDLIRLTQSDLNRGDRTRVMVCITMDAHGRDVV 1152          
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Match: A0A8J2X268_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X268_9STRA)

HSP 1 Score: 275 bits (704), Expect = 7.760e-81
Identity = 144/289 (49.83%), Postives = 199/289 (68.86%), Query Frame = 1
Query:    1 WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEA-------CNLPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYFVSDPDLLDILSNGSNPRKVMRHVTKIFLATGKIVLDE-------RPTAKRFITCVGKEDLPFDPPVQLNGKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRRDDGAAEDPAQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTRTKLAKSDRSRIMCAITLDAHGRDVL 825
            W YLEPLF+ SDEVKRELP D+ERFAG   ++ +IL T+  T+N+KEA       CN+ G+++RLEG LA L+ CKK+L DFL G+R +FPR+YF S+ DLLDILSNGS P KVM H +KI+L+T  + L E       RP A  F+  VGKE +PF+P V L GKVE Y+Q +LD ++ TL + L R++ R+    R +W+M + + G   DPAQI LL   ++YV+GVE+AF K++ G+AN + EY+   I  L++L+RLT   L   +R+RIM  IT+D+HGRD++
Sbjct: 1053 WSYLEPLFIHSDEVKRELPVDAERFAGIDVEIKDILTTSWDTRNIKEARSRRFEACNVDGMLERLEGELAGLDLCKKSLADFLDGRRRQFPRYYFTSEADLLDILSNGSVPEKVMVHTSKIYLSTKVLTLSEDERTASNRPIAVGFVAGVGKEYVPFEPAVPLEGKVEIYMQTVLDAMKITLYENLKRSVVRYAQMERKQWVMFK-EGGRPADPAQIILLTLAINYVQGVEDAFTKMQEGNANGMVEYNQLQIDDLSDLVRLTGGDLDGENRTRIMVCITMDSHGRDIV 1340          
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Match: B5YNU5_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNU5_THAPS)

HSP 1 Score: 272 bits (695), Expect = 1.210e-79
Identity = 137/281 (48.75%), Postives = 190/281 (67.62%), Query Frame = 1
Query:    1 WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEACNLPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYFVSDPDLLDILSNGSNPRKVMRHVTKIFLATGKIVLDE------RPTAKRFITCVGKEDLPFDPPVQLNGKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRRDDGAAEDPAQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTRTKLAKSDRSRIMCAITLDAHGRDVL 825
            W YLEPLF+ SDEVKRELPED+ RF     D   +L  A  TKNV  A N  GL+ +LEG+   L+ CKK+L DFL G+R +FPR+YFVS+ DLLDILSNG NP K++ H++KI+L+T  +VL E      RP+A  F+  VG E + F+P V L GKVE Y+Q ILD  + +L     R+L R+ T PR EW++ + D     DPAQ +LLV  +++V+ VEEA   L  G+++AL  YS + + +L++LI+LT ++L+K DR+R+M  IT+DAH RD++
Sbjct:  235 WSYLEPLFIHSDEVKRELPEDATRFITIDIDTRGVLHKAWDTKNVNRAFNEFGLIDKLEGIQEQLDICKKSLADFLDGRRRQFPRYYFVSEADLLDILSNGGNPEKILSHISKIYLSTKTLVLSETKSSTGRPSATEFVAGVGSEVVTFEPAVPLEGKVEIYMQTILDAQKKSLFATTKRSLDRYHTMPRPEWILAKDDASRPRDPAQTTLLVLAINHVKEVEEALAALGNGESDALVHYSEKQVTQLDDLIKLTHSELSKGDRTRVMVCITMDAHARDIV 515          
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Match: D7FW50_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW50_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 1.480e-78
Identity = 141/284 (49.65%), Postives = 188/284 (66.20%), Query Frame = 1
Query:    1 WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEACNLPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYFVSDPDLLDILSNGSNPRKVMRHVTKIFLATGKIVLD-------ERPTAKRFITCVGKEDLPFDPPVQLNGKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRRDDGAAE--DPAQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTRTKLAKSDRSRIMCAITLDAHGRDVL 825
            WRYLEPLF+ SDEVK+ELP D++RF     +V   L      K VK ACN PGL+ +LE ++  LEKCKK+L ++L+GK+  FPRF+F S+ DLLDILSNG+ P K+MRHV K+ L+T  +VL+       +RP A RF   VG E + F+P V L GKVE YLQ +L+  R TL   L R+L R+P + R EWLMD    G+    DPAQI+LLV G++YV  VE    +++ GD +AL  Y    + +LN+LI LTR++L + DR RIM  IT+DAH RD++
Sbjct: 1006 WRYLEPLFIHSDEVKKELPLDTKRFEKIDGEVKATLMELWKVKKVKAACNKPGLVPKLEIVVVELEKCKKSLSEYLSGKKRLFPRFHFTSEADLLDILSNGNQPSKIMRHVNKLMLSTRTLVLESVPGNVSDRPRAIRFEAGVGDEIIDFEPAVLLEGKVENYLQAVLNCQRKTLGNTLKRSLNRYPNQARVEWLMDADPPGSVSKTDPAQIALLVAGINYVFEVEATLDRVQTGDNSALTGYHDLQVNQLNQLIELTRSELKRDDRQRIMSLITVDAHARDIV 1289          
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Match: A0A6H5KXD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD4_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 5.080e-78
Identity = 135/282 (47.87%), Postives = 188/282 (66.67%), Query Frame = 1
Query:    1 WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEACNLPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYFVSDPDLLDILSNGSNPRKVMRHVTKIFLATGKIVLDE------RPTAKRFITCVGKEDLPFDPPVQLNGKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRR-DDGAAEDPAQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTRTKLAKSDRSRIMCAITLDAHGRDVL 825
            W YLEPLF+GS+EVK+ELPED++RF G   DV  +L +    K+V++ CN  G +++LE +   LE CKK+L DFL G+R +FPR+YFVS+ DLLDILSNGS+P K++ H  K++L    +VL +      RP A R ++ VG E++ F+P + L GKVE Y+Q +LD  + +L   L R+L R+    R EWLM +    G   DPAQI LL   ++YV  VE AF + + G  NAL  Y+ + I +LN+LIRLT++ L K DR+R+M  IT+DAHGRDV+
Sbjct:  788 WSYLEPLFIGSEEVKKELPEDAKRFEGIDTDVKALLKSMWEKKSVRDGCNTDGYLEKLESIQEQLELCKKSLADFLDGRRRQFPRYYFVSEADLLDILSNGSDPNKILVHTPKVYLCCKTLVLGDELMPSGRPKAVRLVSGVGSEEVEFEPAIPLEGKVEIYMQDVLDVTKASLYNNLKRSLSRYNEMSRPEWLMHKNPSSGRPSDPAQIILLTLAINYVSEVEAAFIEGQKGKQNALTHYNKQQIDQLNDLIRLTQSDLTKGDRTRVMVCITMDAHGRDVV 1069          
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Match: D7FRX0_ECTSI (Dynein heavy chain family dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX0_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 5.080e-78
Identity = 135/282 (47.87%), Postives = 188/282 (66.67%), Query Frame = 1
Query:    1 WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEACNLPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYFVSDPDLLDILSNGSNPRKVMRHVTKIFLATGKIVLDE------RPTAKRFITCVGKEDLPFDPPVQLNGKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRRD-DGAAEDPAQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTRTKLAKSDRSRIMCAITLDAHGRDVL 825
            W YLEPLF+GS+EVK+ELPED++RF G   DV  +L +    K+V++ CN  G +++LE +   LE CKK+L DFL G+R +FPR+YFVS+ DLLDILSNGS+P K++ H  K++L    +VL +      RP A R ++ VG E++ F+P + L GKVE Y+Q +LD  + +L   L R+L R+    R EWLM +    G   DPAQI LL   ++YV  VE AF + + G  NAL  Y+ + I +LN+LIRLT++ L K DR+R+M  IT+DAHGRDV+
Sbjct:  788 WSYLEPLFIGSEEVKKELPEDAKRFEGIDTDVKALLKSMWEKKSVRDGCNTDGYLEKLESIQEQLELCKKSLADFLDGRRRQFPRYYFVSEADLLDILSNGSDPNKILVHTPKVYLCCKTLVLGDELMPSGRPKAVRLVSGVGSEEVEFEPAIPLEGKVEIYMQDVLDVTKASLYNNLKRSLSRYSEMSRPEWLMHKNPTSGRPSDPAQIILLTLAINYVSEVEAAFIEGQKGKQNALTHYNKQQIDQLNDLIRLTQSDLTKGDRTRVMVCITMDAHGRDVV 1069          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85309.19887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8EH26_CAFRO2.340e-10862.67Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A7S2QUS9_9STRA8.400e-8653.05Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
F0Y0Z0_AURAN1.610e-8351.24Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0YNI2_AURAN2.960e-8352.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A836CGE4_9STRA1.390e-8251.23Dynein heavy chain family dynein heavy chain n=1 T... [more]
A0A8J2X268_9STRA7.760e-8149.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B5YNU5_THAPS1.210e-7948.75Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
D7FW50_ECTSI1.480e-7849.65Dynein heavy chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5KXD4_9PHAE5.080e-7847.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRX0_ECTSI5.080e-7847.87Dynein heavy chain family dynein heavy chain n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85309contigM-pyrifera_M_contig85309:3..866 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score282.7
Seed ortholog evalue1.8e-73
Seed eggNOG ortholog44056.XP_009033682.1
Preferred nameKLHDC2
KEGG koko:K10408,ko:K20054,ko:K20285
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005929,GO:0012505,GO:0016020,GO:0016604,GO:0031090,GO:0031514,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0070013,GO:0120025
EggNOG free text desc.nitrile biosynthetic process
EggNOG OGsCOG5245@1,KOG0379@1,KOG0379@2759,KOG3595@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04812
Exons2
Model size825
Cds size825
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816761.8519073-CDS-M-pyrifera_M_contig85309:2..4541622816761.8519073-CDS-M-pyrifera_M_contig85309:2..454Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85309 3..454 -
1692278163.1513133-CDS-M-pyrifera_M_contig85309:2..4541692278163.1513133-CDS-M-pyrifera_M_contig85309:2..454Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85309 3..454 -
1622816761.8635235-CDS-M-pyrifera_M_contig85309:493..8661622816761.8635235-CDS-M-pyrifera_M_contig85309:493..866Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85309 494..866 -
1692278163.1640701-CDS-M-pyrifera_M_contig85309:493..8661692278163.1640701-CDS-M-pyrifera_M_contig85309:493..866Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85309 494..866 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85309.19887.1prot_M-pyrifera_M_contig85309.19887.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85309 3..866 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85309.19887.1

>prot_M-pyrifera_M_contig85309.19887.1 ID=prot_M-pyrifera_M_contig85309.19887.1|Name=mRNA_M-pyrifera_M_contig85309.19887.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp
WRYLEPLFVGSDEVKRELPEDSERFAGGHADVIEILATAGATKNVKEACN
LPGLMKRLEGLLALLEKCKKALDDFLAGKRAEFPRFYFVSDPDLLDILSN
GSNPRKVMRHVTKIFLATGKIVLDERPTAKRFITCVGKEDLPFDPPVQLN
GKVEKYLQVILDGVRGTLAKALDRALQRFPTKPRTEWLMDRRDDGAAEDP
AQISLLVCGMDYVRGVEEAFRKLEGGDANALREYSTEHIAKLNELIRLTR
TKLAKSDRSRIMCAITLDAHGRDVL
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mRNA from alignment at M-pyrifera_M_contig85309:3..866-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85309.19887.1 ID=mRNA_M-pyrifera_M_contig85309.19887.1|Name=mRNA_M-pyrifera_M_contig85309.19887.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig85309:3..866- (Macrocystis pyrifera P11B4 male)
TGGCGTTATCTTGAACCACTCTTTGTTGGATCAGATGAAGTGAAGCGTGA ATTGCCAGAGGATAGTGAGCGTTTTGCTGGTGGACATGCAGATGTGATTG AAATTCTTGCAACTGCTGGTGCAACCAAGAACGTCAAGGAAGCATGTAAC CTTCCAGGATTGATGAAACGTCTGGAAGGCCTTTTGGCATTGCTTGAAAA GTGCAAAAAGGCTTTGGATGACTTCCTTGCAGGGAAGCGTGCTGAATTCC CACGATTCTACTTCGTGTCTGATCCTGATCTTTTGGACATTCTTTCAAAC GGCTCCAACCCACGCAAGGTGATGCGCCATGTAACCAAGATCTTCCTTGC AACTGGCAAGATTGTGTTGGATGGTGGTGCGGAAGGAGAAGAAGCGGATC GTGATGGAGCAGAGCGTCCAACTGCAAAGCGATTCATTACTTGTGTTGGA AAGGAAGATCTTCCATTTGATCCTCCAGTACAACTCAATGGAAAGGTGGA AAAGTACCTTCAAGTGATTTTGGATGGTGTCCGTGGGACGCTTGCAAAGG CACTTGACCGTGCTCTTCAACGGTTCCCAACCAAGCCACGCACGGAGTGG TTGATGGATCGCCGTGATGATGGTGCTGCAGAAGACCCTGCACAAATTTC TCTCCTCGTATGTGGAATGGATTATGTCCGAGGTGTGGAAGAAGCATTCC GCAAGCTGGAAGGTGGAGATGCAAATGCTTTGCGTGAATATTCCACAGAA CACATTGCAAAGCTCAATGAGCTCATTCGTCTCACGCGTACAAAGCTTGC AAAGTCTGATCGCTCTCGTATTATGTGCGCTATCACGCTTGATGCACATG GTCGTGATGTGTTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85309:3..866-

>mRNA_M-pyrifera_M_contig85309.19887.1 ID=mRNA_M-pyrifera_M_contig85309.19887.1|Name=mRNA_M-pyrifera_M_contig85309.19887.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1650bp|location=Sequence derived from alignment at M-pyrifera_M_contig85309:3..866- (Macrocystis pyrifera P11B4 male)
TGGCGTTATCTTGAACCACTCTTTGTTGGATCAGATGAAGTGAAGCGTGA
ATTGCCAGAGGATAGTGAGCGTTTTGCTGGTGGACATGCAGATGTGATTG
AAATTCTTGCAACTGCTGGTGCAACCAAGAACGTCAAGGAAGCATGTAAC
CTTCCAGGATTGATGAAACGTCTGGAAGGCCTTTTGGCATTGCTTGAAAA
GTGCAAAAAGGCTTTGGATGACTTCCTTGCAGGGAAGCGTGCTGAATTCC
CACGATTCTACTTCGTGTCTGATCCTGATCTTTTGGACATTCTTTCAAAC
GGCTCCAACCCACGCAAGGTGATGCGCCATGTAACCAAGATCTTCCTTGC
AACTGGCAAGATTGTGTTGGATGTGGCGTTATCTTGAACCACTCTTTGTT
GGATCAGATGAAGTGAAGCGTGAATTGCCAGAGGATAGTGAGCGTTTTGC
TGGTGGACATGCAGATGTGATTGAAATTCTTGCAACTGCTGGTGCAACCA
AGAACGTCAAGGAAGCATGTAACCTTCCAGGATTGATGAAACGTCTGGAA
GGCCTTTTGGCATTGCTTGAAAAGTGCAAAAAGGCTTTGGATGACTTCCT
TGCAGGGAAGCGTGCTGAATTCCCACGATTCTACTTCGTGTCTGATCCTG
ATCTTTTGGACATTCTTTCAAACGGCTCCAACCCACGCAAGGTGATGCGC
CATGTAACCAAGATCTTCCTTGCAACTGGCAAGATTGTGTTGGATGAGCG
TCCAACTGCAAAGCGATTCATTACTTGTGTTGGAAAGGAAGATCTTCCAT
TTGATCCTCCAGTACAACTCAATGGAAAGGTGGAAAAGTACCTTCAAGTG
ATTTTGGATGGTGTCCGTGGGACGCTTGCAAAGGCACTTGACCGTGCTCT
TCAACGGTTCCCAACCAAGCCACGCACGGAGTGGTTGATGGATCGCCGTG
ATGATGGTGCTGCAGAAGACCCTGCACAAATTTCTCTCCTCGTATGTGGA
ATGGATTATGTCCGAGGTGTGGAAGAAGCATTCCGCAAGCTGGAAGGTGG
AGATGCAAATGCTTTGCGTGAATATTCCACAGAACACATTGCAAAGCTCA
ATGAGCTCATTCGTCTCACGCGTACAAAGCTTGCAAAGTCTGATCGCTCT
CGTATTATGTGCGCTATCACGCTTGATGCACATGGTCGTGATGTGTTGAG
CGTCCAACTGCAAAGCGATTCATTACTTGTGTTGGAAAGGAAGATCTTCC
ATTTGATCCTCCAGTACAACTCAATGGAAAGGTGGAAAAGTACCTTCAAG
TGATTTTGGATGGTGTCCGTGGGACGCTTGCAAAGGCACTTGACCGTGCT
CTTCAACGGTTCCCAACCAAGCCACGCACGGAGTGGTTGATGGATCGCCG
TGATGATGGTGCTGCAGAAGACCCTGCACAAATTTCTCTCCTCGTATGTG
GAATGGATTATGTCCGAGGTGTGGAAGAAGCATTCCGCAAGCTGGAAGGT
GGAGATGCAAATGCTTTGCGTGAATATTCCACAGAACACATTGCAAAGCT
CAATGAGCTCATTCGTCTCACGCGTACAAAGCTTGCAAAGTCTGATCGCT
CTCGTATTATGTGCGCTATCACGCTTGATGCACATGGTCGTGATGTGTTG
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