mRNA_M-pyrifera_M_contig85305.19886.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85305.19886.1
Unique NamemRNA_M-pyrifera_M_contig85305.19886.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Match: A0A5A8D1I6_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D1I6_CAFRO)

HSP 1 Score: 235 bits (600), Expect = 1.070e-67
Identity = 153/280 (54.64%), Postives = 193/280 (68.93%), Query Frame = 1
Query:    1 EHMGPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQRELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALISKNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLEDVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLAAHKRKQEALVQELERAVAKREDIAVRHEAQRTGQDK---ALTKGSALXXXXXXXXXXXXXRAGVKELAKRLEEKLAEL 831
            EH GPL AT HN AK+IA +RA+ + LQRRWL  QT LV A+ADA++KAAQ REL +QRVL++QK+ RL+ AV AQR +  D+   +ARMR+DM RI+ LI+KN+ L  +L E+ F AE +F E L+E E  S+A  A +  L+E K RLLEDVLEAERQ A+LEKK++LE+E Q ALDP+VG+SE+  M REIHRM+LRL A KR QE LV++L+RAV  REDI+VR  A+ TG+D     LTK  A              RA    LA  LEE  AEL
Sbjct:  493 EHTGPLQATAHNLAKKIAETRAQVDTLQRRWLGEQTALVEASADAEDKAAQLRELQAQRVLMDQKRLRLERAVAAQRADTADLKASMARMRDDMERISGLIAKNDGLRKRLEESTFAAETDFVEGLKEAESASVAAEADVARLKEAKARLLEDVLEAERQGAMLEKKLKLEREMQEALDPSVGESEVQAMQREIHRMRLRLDALKRDQERLVKDLQRAVQMREDISVRFRARMTGKDPKAGGLTKAGAGKRAVVLRKQVKERRAATARLAGALEEARAEL 772          
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Match: A0A7S1XYJ4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYJ4_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.800e-43
Identity = 113/242 (46.69%), Postives = 154/242 (63.64%), Query Frame = 1
Query:    1 EHMGPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQRELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALISKNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLEDVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLAAHKRKQEALVQELERAVAKREDIAVRHEAQRTGQDKALTK 726
            E MGPL AT+ N  +E+ A    +  LQR WL  QT LVA AA  +E   +  EL ++  +L QK+ RL A +  Q EE + +   +  M +DM+R+N LI KN  +   +  T FV E+EF EEL+ELE ES AL+AR    R+ K  + ++VLEAERQ  L EKKIELEKET+AALDP  G++E+ GM REIHRM++RL   +R+QE L+ ++ERA+ KRE IA R    +  ++ A  K
Sbjct:  522 ESMGPLEATIKNLRRELEAVGTSSAQLQREWLRDQTQLVAYAAQTEELRDENAELSARITILSQKRLRLLADITRQDEETQRLDGRVRVMHQDMSRLNDLIGKNTKMQDDIKNTNFVMEREFVEELKELETESTALDARTREARDAKSEINQEVLEAERQLLLWEKKIELEKETKAALDPESGQAEVKGMEREIHRMRIRLTGLQREQEKLITDMERAIYKREAIATRFRGAQAAENLAAQK 763          
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Match: A0A7S3XSM0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSM0_HETAK)

HSP 1 Score: 161 bits (408), Expect = 3.060e-41
Identity = 108/242 (44.63%), Postives = 151/242 (62.40%), Query Frame = 1
Query:    1 EHMGPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQRELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALISKNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLEDVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLAAHKRKQEALVQELERAVAKREDIAVRHEAQRTGQDKALTK 726
            E+MGPL +T+ +  KEI +     + +Q  WLA QTTLV   A+ +E   +  EL ++  +L QK+ R    ++  +++ K +   +  M +DM R+N LI +N     +L    FV EKEF EELRELE ESL L AR+  +R  K  +LE+++E ERQ  L EKKI+LE+ETQAALDP VG SE  GM +EIHRM+LRL   KR+QE L+  +E AV KRE I+VR + ++      +TK
Sbjct:  406 ENMGPLESTIRHLQKEIESVGNEVDQMQHEWLADQTTLVHTVAETEELLEKNAELKAKVSILSQKRLRQLQEIQQHKDDVKRLSASIEVMHKDMVRLNELIGQNAKAQGELQNQNFVLEKEFVEELRELEGESLRLEARVQEVRTRKAEVLEEIVETERQVMLWEKKIQLERETQAALDPEVGMSEAKGMEKEIHRMKLRLENLKREQERLLAAMETAVLKREQISVRFQGKKKAARGKMTK 647          
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Match: A0A7S2C2G7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2G7_9STRA)

HSP 1 Score: 160 bits (405), Expect = 9.970e-41
Identity = 109/242 (45.04%), Postives = 153/242 (63.22%), Query Frame = 1
Query:    1 EHMGPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQRELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALISKNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLEDVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLAAHKRKQEALVQELERAVAKREDIAVRHEAQRTGQDKALTK 726
            EHMGPL AT+    KEI      A  LQR WLA QT LV+ +++ +EK  +  EL ++  +L +K+ RL+  + +   E K +   +  M +DM R+N LI KN  L  +L++T  V E EF  EL+ELE  S+ L  ++ +++  K  LL+D++E ERQ  L EKKI+LEKETQAALDP VG  EI  M +EIHRM+LR    K +Q+ +V+E+ERAV KRE IA+R +  ++G  K  TK
Sbjct:  526 EHMGPLEATISALRKEIVTVNEAATKLQREWLADQTQLVSTSSETEEKLEKNTELRARISILTEKKLRLNKDIGSHEAEVKRLDHMIQNMHKDMQRLNELIGKNTELQGELSQTNSVMEMEFVNELKELEHVSVQLEEKVTAIKSAKAGLLDDIMETERQLLLWEKKIQLEKETQAALDPEVGMQEIHAMEKEIHRMKLRFTTLKSEQDRMVKEMERAVHKREAIALRFKG-KSGAAKNATK 766          
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Match: A0A2R5GWY6_9STRA (Coiled-coil domain-containing protein 40 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWY6_9STRA)

HSP 1 Score: 152 bits (385), Expect = 4.750e-38
Identity = 98/228 (42.98%), Postives = 145/228 (63.60%), Query Frame = 1
Query:    1 EHMGPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQRELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALISKNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLEDVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLAAHKRKQEALVQELERAVAKREDIAVR 684
            E++GPL AT+ N  KE  A  A+   L+R WL  QT  V    + +++     EL S   +L+QK+ RLD  + AQ  E +D+   + RM  DM ++N+LI++++     LA    V + EF  EL+ELE +S+   AR++  + EK  LL++++E+ERQ  L EKKI+LEKETQ ALDP VG+SE+  M +EIHRM++RL    R+QE +++E+E A+ KRE IA R
Sbjct:  534 ENLGPLEATIKNLTKETTALSAQNRELERTWLKLQTEFVQVVNEMEQETTTVHELTSTETILQQKKKRLDNRIHAQSAELQDLEGRVRRMHNDMHKLNSLIAEHKDKQDSLANVNEVMQAEFISELKELEAQSVDAEARIEKTKMEKQSLLDEIMESERQIKLWEKKIQLEKETQEALDPTVGQSEVKAMEKEIHRMKIRLGNLHREQEKMIKEMEMAILKRETIATR 761          
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Match: H3GBY4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBY4_PHYRM)

HSP 1 Score: 150 bits (380), Expect = 2.200e-37
Identity = 103/225 (45.78%), Postives = 145/225 (64.44%), Query Frame = 1
Query:   10 GPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQRELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALISKNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLEDVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLAAHKRKQEALVQELERAVAKREDIAVR 684
            GPL AT+ N  +E    R      Q++WL+ QT LV AA++A E + + +E  S+  +LEQKQ RL   ++  + E +D+   +A +  D  R+N LI++  S   +L  +    E EF  ELRELE  S+AL +R  +LR+EK  LL  V+E ERQ  L EKKI+LEKETQAALDP VG++E   M +EIHRM+LRL A +R QE ++Q++E+AV KR+ IA+R
Sbjct:  541 GPLEATIKNLVRETKLGREENTVKQKQWLSTQTALVHAASEAQELSERNQERKSKTSVLEQKQLRLQHELQEMQRELRDLSNGIATLHADTGRLNELIARQGSKHDELLNSNHSLELEFASELRELETASVALESRAATLRQEKHELLNRVVEVERQLMLWEKKIQLEKETQAALDPEVGQAEARSMEKEIHRMRLRLEALQRSQEQMLQDMEQAVHKRDLIALR 765          
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Match: A0A7S0JKS8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JKS8_9EUKA)

HSP 1 Score: 145 bits (366), Expect = 4.290e-37
Identity = 98/245 (40.00%), Postives = 156/245 (63.67%), Query Frame = 1
Query:    1 EHMGPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQRELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALISKNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLEDVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLAAHKRKQEALVQELERAVAKREDIAVRHEAQRTGQDKALTKGSA 735
            E  GPL AT+ N  KEIAA  A +  LQR W+  QT LV+        +  Q EL +++ +LEQK+ R+     +Q +E ++  +  + +  +M +IN +++++ +   +LA+  F+ E  F E+L+ELE+E++ + +++  L+EEK RLL DV EAE+Q  LL+KKI LE+ETQAALDP VG +E   M REIHRM+LR +  +R+QE ++ ++ERA+ KR++I  +      G+  +  KG+A
Sbjct:   25 EDAGPLEATIVNLKKEIAAKAAESAELQRNWIKMQTELVSVQNGNQAMSEGQYELRARQAILEQKKARIAGQFESQHKELRETERLTSSLHIEMGKINRVLAEHSTRQTQLADDNFLMETTFVEKLKELEQEAVTMESKIVELKEEKERLLLDVSEAEKQLMLLDKKIALERETQAALDPEVGAAEARAMQREIHRMRLRYSQLQRRQEMMISDMERAIYKRDNIEAK------GRVSSQKKGAA 263          
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Match: A0A7S2WDI7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WDI7_9STRA)

HSP 1 Score: 149 bits (375), Expect = 9.090e-37
Identity = 96/228 (42.11%), Postives = 145/228 (63.60%), Query Frame = 1
Query:    1 EHMGPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQRELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALISKNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLEDVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLAAHKRKQEALVQELERAVAKREDIAVR 684
            E++GPL AT+ N  KE  A   ++  L+R WL  QT  V    + +++     EL S   +LEQK+ RL + +R+Q  E KD+   + RM  DM ++N  IS+++     LA +  + + EF  EL+ELE++S+   ++++S + EK  LL+ ++E+ERQ  L EKKI+LEKETQ ALDP VG+SE+  M REIHRM++R     R+QE +++E+E A+ KRE IA R
Sbjct:  424 ENLGPLEATIKNLTKETTAITTQSRELERTWLKLQTEYVQVVNEMEQENTTVHELTSSETILEQKKKRLGSRIRSQTAELKDLDTRVRRMHNDMHKLNEAISEHKGKHDALANSNEILQTEFINELKELEQQSVQAESKIESCKLEKQSLLDQIMESERQIKLWEKKIQLEKETQQALDPTVGQSEVKSMEREIHRMKIRYDNLTREQEKMIKEMEVAILKRETIATR 651          
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Match: A0A662Y8P7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8P7_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.600e-36
Identity = 104/225 (46.22%), Postives = 143/225 (63.56%), Query Frame = 1
Query:   10 GPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQRELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALISKNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLEDVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLAAHKRKQEALVQELERAVAKREDIAVR 684
            GPL AT+ N  +E    R    A Q++WL+ QT LV AA++A E + + +E  S+  +LEQKQ RL   ++            +A +  D AR+N LI+++ S    L  +    E EF  ELRELE  S+AL AR  +LR+EK  LL+ V+E ERQ  L EKKI+LEKETQAALDP VG++E   M +EIHRM+LRL A +R QE ++Q++E+AV KR+ IA+R
Sbjct:  560 GPLEATIKNLVRETKLGREENAARQKQWLSTQTALVYAASEAQELSERNQERKSKTSVLEQKQLRLQHELQXXXXXXXXXXTGIATLHADTARLNELIARHGSRHETLLNSNHALELEFASELRELEAASVALEARATALRQEKHELLDRVVEVERQLMLWEKKIQLEKETQAALDPEVGQAEARAMEKEIHRMRLRLEALQRSQEQMLQDMEQAVHKRDLIALR 784          
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Match: D0P2M2_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P2M2_PHYIT)

HSP 1 Score: 144 bits (363), Expect = 2.870e-36
Identity = 101/225 (44.89%), Postives = 141/225 (62.67%), Query Frame = 1
Query:   10 GPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQRELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALISKNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLEDVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLAAHKRKQEALVQELERAVAKREDIAVR 684
            GPL A + N  +E    R    A Q++WL  QT LV AA++A E + + +E  S+  +LEQKQ RL   +   + E +D+   +A +  D  R+N LI++  S    L  +    E EF  ELRELE  S+++ AR  +LR+EK  LL  V+E ERQ  L EKKI+LEKETQAALDP VG++E   M +EIHRM+LRL   +R QE ++Q++E+AV KR+ IA+R
Sbjct:   77 GPLEAIIKNLVRETKIGREDNTAKQKQWLNTQTALVHAASEAQELSDRNQERKSKTSVLEQKQLRLQHELHEMQRELRDLSNGIASLHADTGRLNDLIARQGSRHDDLLNSNHALELEFASELRELEATSVSMEARAATLRQEKQELLGRVVEVERQLMLWEKKIQLEKETQAALDPEVGQAEARSMEKEIHRMRLRLETLQRSQEQMLQDMEQAVHKRDVIALR 301          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85305.19886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D1I6_CAFRO1.070e-6754.64Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A7S1XYJ4_9STRA2.800e-4346.69Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3XSM0_HETAK3.060e-4144.63Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2C2G7_9STRA9.970e-4145.04Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2R5GWY6_9STRA4.750e-3842.98Coiled-coil domain-containing protein 40 n=1 Tax=H... [more]
H3GBY4_PHYRM2.200e-3745.78Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A7S0JKS8_9EUKA4.290e-3740.00Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S2WDI7_9STRA9.090e-3742.11Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A662Y8P7_9STRA2.600e-3646.22Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
D0P2M2_PHYIT2.870e-3644.89Uncharacterized protein n=1 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85305contigM-pyrifera_M_contig85305:1..864 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score154.8
Seed ortholog evalue5.9e-35
Seed eggNOG ortholog164328.Phyra72863
Preferred nameCCDC40
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001578,GO:0001655,GO:0001822,GO:0001889,GO:0001947,GO:0002009,GO:0003007,GO:0003143,GO:0003146,GO:0003341,GO:0003351,GO:0003352,GO:0003356,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007368,GO:0007389,GO:0007507,GO:0008104,GO:0008150,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030317,GO:0030323,GO:0030324,GO:0031016,GO:0031514,GO:0032501,GO:0032502,GO:0032838,GO:0032879,GO:0032886,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0035050,GO:0035082,GO:0035239,GO:0035295,GO:0035469,GO:0036159,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044458,GO:0044463,GO:0044464,GO:0044782,GO:0048513,GO:0048562,GO:0048565,GO:0048568,GO:0048598,GO:0048729,GO:0048731,GO:0048732,GO:0048793,GO:0048856,GO:0048870,GO:0050789,GO:0050794,GO:0051179,GO:0051270,GO:0051641,GO:0051674,GO:0055123,GO:0060271,GO:0060287,GO:0060429,GO:0060541,GO:0060562,GO:0060632,GO:0061008,GO:0061371,GO:0061512,GO:0065003,GO:0065007,GO:0070286,GO:0070727,GO:0070925,GO:0071840,GO:0071907,GO:0071910,GO:0072001,GO:0072359,GO:0097014,GO:0097722,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
EggNOG free text desc.BRE1 E3 ubiquitin ligase
EggNOG OGs2CJ7Q@1,2QQ91@2759,3QE8E@4776
COG Functional cat.S
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size864
Cds size858
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816761.8045464-CDS-M-pyrifera_M_contig85305:0..8581622816761.8045464-CDS-M-pyrifera_M_contig85305:0..858Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85305 1..858 -
1692278163.1287968-CDS-M-pyrifera_M_contig85305:0..8581692278163.1287968-CDS-M-pyrifera_M_contig85305:0..858Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85305 1..858 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816761.8175683-UTR-M-pyrifera_M_contig85305:858..8641622816761.8175683-UTR-M-pyrifera_M_contig85305:858..864Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85305 859..864 -
1692278163.1406677-UTR-M-pyrifera_M_contig85305:858..8641692278163.1406677-UTR-M-pyrifera_M_contig85305:858..864Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85305 859..864 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85305.19886.1prot_M-pyrifera_M_contig85305.19886.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85305 1..858 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85305.19886.1

>prot_M-pyrifera_M_contig85305.19886.1 ID=prot_M-pyrifera_M_contig85305.19886.1|Name=mRNA_M-pyrifera_M_contig85305.19886.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp
MGPLHATVHNTAKEIAASRARAEALQRRWLARQTTLVAAAADADEKAAQQ
RELVSQRVLLEQKQTRLDAAVRAQREEAKDVGKELARMREDMARINALIS
KNESLAAKLAETAFVAEKEFGEELRELEKESLALNARLDSLREEKGRLLE
DVLEAERQSALLEKKIELEKETQAALDPAVGKSEIAGMTREIHRMQLRLA
AHKRKQEALVQELERAVAKREDIAVRHEAQRTGQDKALTKGSALRKKAEL
RREAKQRRAGVKELAKRLEEKLAELQAAEEQLREAS
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mRNA from alignment at M-pyrifera_M_contig85305:1..864-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85305.19886.1 ID=mRNA_M-pyrifera_M_contig85305.19886.1|Name=mRNA_M-pyrifera_M_contig85305.19886.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig85305:1..864- (Macrocystis pyrifera P11B4 male)
GAGCACATGGGTCCATTGCATGCCACGGTGCACAACACTGCCAAGGAAAT CGCAGCCTCAAGGGCAAGAGCCGAGGCTCTGCAGCGCCGATGGCTTGCTC GGCAGACGACATTAGTGGCAGCTGCGGCTGACGCTGACGAAAAAGCGGCC CAGCAGCGAGAGCTCGTGTCCCAGCGGGTGTTGCTGGAGCAGAAGCAAAC ACGGCTCGACGCTGCCGTGCGCGCCCAGCGAGAAGAGGCCAAGGACGTGG GCAAGGAATTGGCGCGTATGCGGGAAGACATGGCTCGCATCAACGCGCTC ATTTCCAAGAACGAATCTTTGGCTGCAAAACTCGCCGAAACCGCCTTTGT GGCCGAAAAAGAGTTTGGCGAGGAGCTGCGGGAGCTCGAGAAGGAGTCGT TGGCGCTGAATGCGCGGCTCGATTCCTTGCGGGAGGAGAAAGGGCGGCTG CTCGAGGACGTGTTGGAGGCGGAGCGGCAGAGCGCGTTGCTGGAGAAGAA GATTGAGCTGGAGAAGGAAACCCAGGCAGCGCTGGATCCCGCAGTGGGCA AGAGCGAAATCGCCGGAATGACTCGGGAAATCCACCGCATGCAGCTGCGG CTGGCGGCACACAAGCGCAAGCAGGAGGCGCTCGTGCAAGAGCTGGAGCG TGCCGTTGCCAAGCGAGAAGACATTGCTGTGCGGCACGAGGCCCAGAGGA CGGGGCAGGACAAGGCTCTGACCAAGGGCAGTGCGTTGCGAAAAAAGGCG GAGCTGCGGAGGGAGGCGAAGCAGCGACGAGCCGGGGTGAAGGAGCTGGC CAAGCGTCTGGAGGAGAAGCTCGCCGAGCTGCAGGCTGCCGAGGAGCAGC TTCGAGAAGCTTCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85305:1..864-

>mRNA_M-pyrifera_M_contig85305.19886.1 ID=mRNA_M-pyrifera_M_contig85305.19886.1|Name=mRNA_M-pyrifera_M_contig85305.19886.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig85305:1..864- (Macrocystis pyrifera P11B4 male)
ATGGGTCCATTGCATGCCACGGTGCACAACACTGCCAAGGAAATCGCAGC
CTCAAGGGCAAGAGCCGAGGCTCTGCAGCGCCGATGGCTTGCTCGGCAGA
CGACATTAGTGGCAGCTGCGGCTGACGCTGACGAAAAAGCGGCCCAGCAG
CGAGAGCTCGTGTCCCAGCGGGTGTTGCTGGAGCAGAAGCAAACACGGCT
CGACGCTGCCGTGCGCGCCCAGCGAGAAGAGGCCAAGGACGTGGGCAAGG
AATTGGCGCGTATGCGGGAAGACATGGCTCGCATCAACGCGCTCATTTCC
AAGAACGAATCTTTGGCTGCAAAACTCGCCGAAACCGCCTTTGTGGCCGA
AAAAGAGTTTGGCGAGGAGCTGCGGGAGCTCGAGAAGGAGTCGTTGGCGC
TGAATGCGCGGCTCGATTCCTTGCGGGAGGAGAAAGGGCGGCTGCTCGAG
GACGTGTTGGAGGCGGAGCGGCAGAGCGCGTTGCTGGAGAAGAAGATTGA
GCTGGAGAAGGAAACCCAGGCAGCGCTGGATCCCGCAGTGGGCAAGAGCG
AAATCGCCGGAATGACTCGGGAAATCCACCGCATGCAGCTGCGGCTGGCG
GCACACAAGCGCAAGCAGGAGGCGCTCGTGCAAGAGCTGGAGCGTGCCGT
TGCCAAGCGAGAAGACATTGCTGTGCGGCACGAGGCCCAGAGGACGGGGC
AGGACAAGGCTCTGACCAAGGGCAGTGCGTTGCGAAAAAAGGCGGAGCTG
CGGAGGGAGGCGAAGCAGCGACGAGCCGGGGTGAAGGAGCTGGCCAAGCG
TCTGGAGGAGAAGCTCGCCGAGCTGCAGGCTGCCGAGGAGCAGCTTCGAG
AAGCTTCTATGGGTCCATTGCATGCCACGGTGCACAACACTGCCAAGGAA
ATCGCAGCCTCAAGGGCAAGAGCCGAGGCTCTGCAGCGCCGATGGCTTGC
TCGGCAGACGACATTAGTGGCAGCTGCGGCTGACGCTGACGAAAAAGCGG
CCCAGCAGCGAGAGCTCGTGTCCCAGCGGGTGTTGCTGGAGCAGAAGCAA
ACACGGCTCGACGCTGCCGTGCGCGCCCAGCGAGAAGAGGCCAAGGACGT
GGGCAAGGAATTGGCGCGTATGCGGGAAGACATGGCTCGCATCAACGCGC
TCATTTCCAAGAACGAATCTTTGGCTGCAAAACTCGCCGAAACCGCCTTT
GTGGCCGAAAAAGAGTTTGGCGAGGAGCTGCGGGAGCTCGAGAAGGAGTC
GTTGGCGCTGAATGCGCGGCTCGATTCCTTGCGGGAGGAGAAAGGGCGGC
TGCTCGAGGACGTGTTGGAGGCGGAGCGGCAGAGCGCGTTGCTGGAGAAG
AAGATTGAGCTGGAGAAGGAAACCCAGGCAGCGCTGGATCCCGCAGTGGG
CAAGAGCGAAATCGCCGGAATGACTCGGGAAATCCACCGCATGCAGCTGC
GGCTGGCGGCACACAAGCGCAAGCAGGAGGCGCTCGTGCAAGAGCTGGAG
CGTGCCGTTGCCAAGCGAGAAGACATTGCTGTGCGGCACGAGGCCCAGAG
GACGGGGCAGGACAAGGCTCTGACCAAGGGCAGTGCGTTGCGAAAAAAGG
CGGAGCTGCGGAGGGAGGCGAAGCAGCGACGAGCCGGGGTGAAGGAGCTG
GCCAAGCGTCTGGAGGAGAAGCTCGCCGAGCTGCAGGCTGCCGAGGAGCA
GCTTCGAGAAGCTTCT
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