mRNA_M-pyrifera_M_contig85176.19853.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Match: A2DDV6_TRIVA (B-box zinc finger family protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2DDV6_TRIVA) HSP 1 Score: 94.0 bits (232), Expect = 5.370e-20 Identity = 53/110 (48.18%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 37 GHVLGGFAADPWYFHGDYYGSPAS-FLFSLTRGPGVKVPFR----------ADPDVLQFGIGDLVLTGDFSECSSEIEKSYGIGLRPGSDETRSLLAGRHKFALQDVEVW 333 G+V GGFAA W G +G +S FLFS+ R + +P+R A DVL FG DLVL GDF+ CS++IEKSYGIGL+PGS E R +FA VEVW Sbjct: 615 GYVFGGFAATKWNCDGQPFGDKSSSFLFSINRD--IFIPYRPTIDDPCYLYATKDVLTFGKYDLVLAGDFNMCSAQIEKSYGIGLQPGSKEARLFFLPEKEFAADCVEVW 722
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Match: A2EUG7_TRIVA (B-box zinc finger family protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2EUG7_TRIVA) HSP 1 Score: 84.3 bits (207), Expect = 1.250e-16 Identity = 43/110 (39.09%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 31 ADGHVLGGFAADPWYFHGDYYGS-PASFLFSLTRGPGVKVPFRAD--------PDVLQFGIGDLVLTGDFSECSSEIEKSYGIGLRPGSDETRSLLAGRHKFALQDVEVW 333 A+ + GGFAA W G +G +SFLFS+ ++ +++ P+ FG DLVL GDF C+S IE ++GIGLR GS++ ++ LAG +F +VEVW Sbjct: 534 ANDRIFGGFAASKWTNDGRSFGEGTSSFLFSIDNNAFIQAHPQSEDPVYMVGTPETFSFGRDDLVLAGDFDRCASTIENTFGIGLRFGSEQAQTFLAGTSRFKADEVEVW 643
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Match: A0A8J5XI23_DIALT (TLDc domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XI23_DIALT) HSP 1 Score: 81.6 bits (200), Expect = 1.140e-15 Identity = 51/118 (43.22%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 10 TVVVGRTADGHVLGGFAADPWYFHGDYYGSPASFLFSLTRGPGVKVPFRAD----------PDVLQFGIGDLVLTGDFSECSSEIEKSYGIGLRPGSDETRSLLAGRHKFALQDVEVW 333 TVV+ R A+GH GG+A+ PW +G+ S LFSL+ +++P A D++ FG DLVLTGDF ECSS +E S+ IGL P E LAG FA + VEVW Sbjct: 838 TVVLCR-ANGHSFGGYASTPWNRARSRFGTRRSMLFSLSHD--MRIPCVASGIEQRCLWGSDDLIAFGGTDLVLTGDFHECSSRLEHSFSIGLSPS--EAALFLAGAPTFACEVVEVW 950
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Match: A2ERD5_TRIVA (B-box zinc finger family protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2ERD5_TRIVA) HSP 1 Score: 81.3 bits (199), Expect = 1.510e-15 Identity = 46/118 (38.98%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 10 TVVVGRTADGHVLGGFAADPWYFHGDYYGSPAS-FLFSLTRGPGVKVPFRAD--------PDVLQFGIGDLVLTGD-FSECSSEIEKSYGIGLRPGSDETRSLLAGRHKFALQDVEVW 333 T ++ ++ D V GGFAA W G +S FLFS+T+ + ++D P+ L FG DLV+ G+ F CSSE+E S+GIG GS + + LAG+H+FA +EVW Sbjct: 551 TCILIKSGD-QVFGGFAASKWTADGTKKTDKSSTFLFSITKDAFIPYGGQSDEKFYTMSTPETLNFGGKDLVIAGESFERCSSELENSFGIGFLYGSQKAKEFLAGKHRFAADQIEVW 667
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Match: A0A7S2WT40_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WT40_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.830e-14 Identity = 30/62 (48.39%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 154 RADPDVLQFGIGDLVLTGDFSECSSEIEKSYGIGLRPGSDETRSLLAGRHKFALQDVEVWAV 339 ++D +QFG+ DLVL+GD + CSS++E S+G+G+ PG+DE +LLAG F + ++EVWA+ Sbjct: 203 KSDESTMQFGVRDLVLSGDLTSCSSQLECSFGVGMSPGADEASTLLAGTGTFQVDELEVWAI 264
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Match: A0A5A8C5K7_CAFRO (TLDc domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C5K7_CAFRO) HSP 1 Score: 73.6 bits (179), Expect = 7.790e-13 Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 157 ADPDVLQFGIGDLVLTGDFSECSSEIEKSYGIGLRPGSDETRSLLAGRHKFALQDVEVWAVG 342 +D + FG+ DLV+ GD + CSSEIE ++GIGLR GS ++LLAG FA+ ++EVW+VG Sbjct: 904 SDEGRISFGLTDLVIEGDLARCSSEIESTFGIGLRAGSTAAKTLLAGAETFAVSNLEVWSVG 965
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Match: A0A024FZ51_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ51_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 4.780e-5 Identity = 35/111 (31.53%), Postives = 51/111 (45.95%), Query Frame = 1 Query: 10 TVVVGRTADGHVLGGFAADPWYFHGDYYGSPASFLFSLTRGPGVKV-PFRADPDVLQFGIGDLVLTGDFSECSSEIEKSYGIGLRPGSDETRS--LLAGRHKFALQDVEVW 333 T+++ +T G VLGGFA W YYG SF+F T P V P+ + + F G+L+ G + ++ G G +T S LA +F + VEVW Sbjct: 328 TILIIKTVQGDVLGGFAPTSWETFNTYYGIGESFVF--TCWPYFNVFPWSKENSMFMFSNGELIAMGGGGNFAWSLDSDLSRGTS-GKSKTFSNPCLASSAEFVVSSVEVW 435
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Match: V9L3K0_CALMI (TLDc domain-containing protein (Fragment) n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9L3K0_CALMI) HSP 1 Score: 50.8 bits (120), Expect = 5.730e-5 Identity = 32/122 (26.23%), Postives = 54/122 (44.26%), Query Frame = 1 Query: 10 TVVVGRTADGHVLGGFAADPWYFHGDYYGSPASFLFSLTRGPGVKVPFRADPDVLQFGIGD------LVLTGDFSECSSEIEKSYGIGLRPGSDETRSL----LAGRHKFALQDVEVWAVGA 345 ++++ + +DGH+ GGFA+ W + G FLF+L+ G+ + + G L + G + I+ YG G + L+G+ FA+ +EVWAVGA Sbjct: 122 SLLIIKDSDGHIFGGFASQSWDVKPQFQGDSKCFLFTLSPQLGMYTCTSYNNHYMYLNHGQQTMPNGLGMGGQHNYFGLWIDSDYGTGHSKAKPRCTTYNSPQLSGKENFAIDVLEVWAVGA 243
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Match: A0A820P3S0_9BILA (Hypothetical protein n=7 Tax=Rotaria socialis TaxID=392032 RepID=A0A820P3S0_9BILA) HSP 1 Score: 50.8 bits (120), Expect = 6.370e-5 Identity = 38/129 (29.46%), Postives = 57/129 (44.19%), Query Frame = 1 Query: 4 EATVVVGRTADGHVLGGFAADPWYFHGDYYGSPASFLFSLTRGPG---VKVPFRADPDVLQ--------FGIG-DL-------VLTGDFSECSSEIEKSYGIGLRPGSDETRSLLAGRHKFALQDVEVW 333 + T+V+ R++DG++ GG+AA W G+Y + SFLF LT G K P+ + D L FG G DL + + S S G+G ++ G H F +VEV+ Sbjct: 263 DPTIVIIRSSDGYLFGGYAAQSWNSAGNYINAINSFLFLLTNANGSQPTKFPYNNNGDGLYGHGGYGPTFGGGHDLHVCDNSNTVNNSYCNIPSSYTSSLGLG--------QATFTGAHNFQTTEVEVF 383
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Match: A0A4W3INT0_CALMI (TLDc domain-containing protein n=3 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3INT0_CALMI) HSP 1 Score: 50.8 bits (120), Expect = 6.580e-5 Identity = 32/122 (26.23%), Postives = 54/122 (44.26%), Query Frame = 1 Query: 10 TVVVGRTADGHVLGGFAADPWYFHGDYYGSPASFLFSLTRGPGVKVPFRADPDVLQFGIGD------LVLTGDFSECSSEIEKSYGIGLRPGSDETRSL----LAGRHKFALQDVEVWAVGA 345 ++++ + +DGH+ GGFA+ W + G FLF+L+ G+ + + G L + G + I+ YG G + L+G+ FA+ +EVWAVGA Sbjct: 303 SLLIIKDSDGHIFGGFASQSWDVKPQFQGDSKCFLFTLSPQLGMYTCTSYNNHYMYLNHGQQTMPNGLGMGGQHNYFGLWIDSDYGTGHSKAKPRCTTYNSPQLSGKENFAIDVLEVWAVGA 424 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85176.19853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85176.19853.1 >prot_M-pyrifera_M_contig85176.19853.1 ID=prot_M-pyrifera_M_contig85176.19853.1|Name=mRNA_M-pyrifera_M_contig85176.19853.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp DEATVVVGRTADGHVLGGFAADPWYFHGDYYGSPASFLFSLTRGPGVKVPback to top mRNA from alignment at M-pyrifera_M_contig85176:217..813- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85176.19853.1 ID=mRNA_M-pyrifera_M_contig85176.19853.1|Name=mRNA_M-pyrifera_M_contig85176.19853.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=597bp|location=Sequence derived from alignment at M-pyrifera_M_contig85176:217..813- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85176:217..813- >mRNA_M-pyrifera_M_contig85176.19853.1 ID=mRNA_M-pyrifera_M_contig85176.19853.1|Name=mRNA_M-pyrifera_M_contig85176.19853.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig85176:217..813- (Macrocystis pyrifera P11B4 male)back to top |