mRNA_M-pyrifera_M_contig85031.19819.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Match: A0A6I6A7Z8_9PLAN (EF-hand domain-containing protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A7Z8_9PLAN) HSP 1 Score: 223 bits (567), Expect = 1.640e-69 Identity = 135/143 (94.41%), Postives = 137/143 (95.80%), Query Frame = 1 Query: 10 MLMKYLIAFVAVAGLITTGVSSQQPRGRGDRDCHCPGGPPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQNGSLTREELPRPPRPLEDQGHRRDDRHGPPPMERGRHQHAERPXXXXXXXXXXXXXXXXXXXRHGHDR 438 MLMKYLIAFVAVAGLITTGVSSQQPRGRGDR+CH PGG PPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQ+GSLTREELPRPPRP EDQGHRRDDRHGPPPMERGRHQHA XXXXXXXXXXXXXXXXXXXRHGHDR Sbjct: 1 MLMKYLIAFVAVAGLITTGVSSQQPRGRGDRECHRPGGHPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQDGSLTREELPRPPRPAEDQGHRRDDRHGPPPMERGRHQHAXXXXXXXXXXXXXXXXXXXXXXRHGHDR 143
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Match: A0A518A3A4_9PLAN (EF hand n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A3A4_9PLAN) HSP 1 Score: 169 bits (427), Expect = 1.000e-48 Identity = 87/104 (83.65%), Postives = 95/104 (91.35%), Query Frame = 1 Query: 16 MKYLIAFVAVAGLITTGVSSQQPRGRGDRDCHCPGGPPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQNGSLTREELPRPPRPLEDQGHRRDDRHGPPP 327 MKYLIAFVA+AGLITTGVSSQQPRGRGD C GGPPPDP+MVLFDTDQDGRIS+ EMDQSAVALK LDR+Q+GSLTREELPRPPRP +++G RRDDRHGPPP Sbjct: 1 MKYLIAFVAIAGLITTGVSSQQPRGRGDHGCQQGGGPPPDPYMVLFDTDQDGRISSEEMDQSAVALKKLDRNQDGSLTREELPRPPRPDDERG-RRDDRHGPPP 103
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Match: A6C5V1_9PLAN (EF-hand domain-containing protein n=7 Tax=Planctomycetaceae TaxID=126 RepID=A6C5V1_9PLAN) HSP 1 Score: 134 bits (336), Expect = 1.600e-35 Identity = 74/128 (57.81%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 1 GRAMLMKYLIAFVAVAGLITTGVSSQQPRGRGDRDCHCPGGPPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQNGSLTREELPRPPRPLEDQ----------GHRRDDRHGPPPMERGRHQHA 354 GR++LMK+LIAF AVA LI TGVSS PR +GDR C P GPPPDP+M+LFDTDQDG IS E++QS LK LDRDQ+G+LTR+E+PRPP P D G R RHG PM R Q A Sbjct: 17 GRSILMKFLIAFAAVAVLIATGVSSHPPRDKGDRGCRRPEGPPPDPYMILFDTDQDGEISPREIEQSGSVLKKLDRDQSGTLTRDEMPRPPHPPRDXXXXXXXXRRPGANRPPRHGADPMPEQRQQKA 144
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Match: A0A517VBE5_9PLAN (EF-hand domain-containing protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VBE5_9PLAN) HSP 1 Score: 120 bits (302), Expect = 1.140e-30 Identity = 61/91 (67.03%), Postives = 69/91 (75.82%), Query Frame = 1 Query: 16 MKYLIAFVAVAGLITTGVSSQQPRGRGDRDCHCPGGPPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQNGSLTREELPRPPRPLED 288 MK+LIAF AVA LI TGVSS PR + DR C P GPPPDPFM+LFDTDQDG IS E++QS LK LDRDQ+G+LTR E+PRPP P D Sbjct: 1 MKFLIAFAAVAILIATGVSSHPPRDQRDRGCQRPEGPPPDPFMILFDTDQDGEISPREIEQSGSVLKKLDRDQSGTLTRNEMPRPPHPPRD 91
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Match: A0A2E2C1D1_9PLAN (EF-hand domain-containing protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C1D1_9PLAN) HSP 1 Score: 111 bits (277), Expect = 5.730e-27 Identity = 62/113 (54.87%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 16 MKYLIAFVAVAGLITTGVSSQQPRGRGDRDCHCPGGPPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQNGSLTREELPRPPRPLEDQGHRRDDRHGPPPMERGRHQHA 354 MKYLI F AV LI TGV+S P G D D P GPP DPFM+LFDTD++G IST E++Q++ L+NLDRDQ+G+LTR+ELPRPP P RD+ P E GR H+ Sbjct: 1 MKYLIVFAAVVALIATGVASHPPGGNEDHDNQRPEGPPRDPFMMLFDTDRNGEISTQEIEQASGVLRNLDRDQSGTLTRDELPRPPHPPRHHPPHRDEH---PRPEAGRPPHS 110
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Match: A0A518I999_9PLAN (EF hand n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I999_9PLAN) HSP 1 Score: 96.3 bits (238), Expect = 5.020e-21 Identity = 50/94 (53.19%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 16 MKYLIAFVAVAGLITTGVSSQQPRGRGDRDCHCPGGPPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQNGSLTREELPRPPRPLEDQGH 297 MK+ IAFVA+AGL+TTG+SSQ + R DR+C PG PPPDP + LFDTDQDG IS E++QS L LPRPPRP +++GH Sbjct: 1 MKFFIAFVAIAGLVTTGISSQ--KSRSDRNCGRPGPPPPDPILRLFDTDQDGEISAQELEQSEAVLXXXXXXXXXXXXXXXLPRPPRPEDERGH 92
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Match: A0A517WXI2_9PLAN (EF hand n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WXI2_9PLAN) HSP 1 Score: 92.4 bits (228), Expect = 1.120e-19 Identity = 55/99 (55.56%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 1 GRAMLMKYLIAFVAVA---GLITTGVSSQQPRGRGDRDCHCPGGPPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQNGSLTREELPRPPRPLED 288 GR MK +IAF+A+A GLITT VSSQ P GPPPDP ++LFDT++D IS EM Q+ LK LDR+Q+G LTREELPRPPRP E+ Sbjct: 29 GRVHQMKKIIAFLAIAAIAGLITTSVSSQP--XXXXXXXXXPEGPPPDPLLMLFDTNRDEEISIQEMKQATEILKKLDRNQDGILTREELPRPPRPGEE 125
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Match: A0A356A7H5_9PLAN (EF-hand domain-containing protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A356A7H5_9PLAN) HSP 1 Score: 83.6 bits (205), Expect = 1.630e-16 Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 16 MKYLIAFVAVAGLITTGVSSQQPRGRGDRDCHCPGGPPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQNGSLTREELPRPPRPLEDQGHRRDDRHGPP 324 MKY +A + + L V +Q PR P GPPPDPF+ LFDTD++G +S +E+ S+ L DR+Q+G LTR+ELPRPPRP E DRH PP Sbjct: 1 MKYALALLGIVSLSALVVYAQPPRP--------PAGPPPDPFLELFDTDENGELSASEIKASSQVLNTFDRNQDGKLTRDELPRPPRPGEH------DRHHPP 89
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Match: A0A3E0PL70_9BACT (EF-hand domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PL70_9BACT) HSP 1 Score: 74.3 bits (181), Expect = 4.380e-13 Identity = 50/112 (44.64%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 1 GRAMLMKYLIAFVAVAGLITTGVSSQQPRGRGDRDCHCPGGPPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQNGSLTREELPRPPRPLEDQGHRRDDRHGPPPMER 336 G A MK L+ V + G + +Q P G GDR PP DPF+ LFD D DG++S E+D +A L+ DR+ +G +T +ELPRPPRP G RR D GPPP +R Sbjct: 5 GGAKSMKALLVVVVLGGSVALLAGAQMP-GWGDR-------PPRDPFLELFDADGDGQLSPAEIDGAAAILRQRDRNGDGIVTHDELPRPPRP----GERRRDG-GPPPRDR 103
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Match: A0A518CLW7_9PLAN (EF-hand domain-containing protein n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CLW7_9PLAN) HSP 1 Score: 57.8 bits (138), Expect = 3.220e-7 Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 124 PPPDPFMVLFDTDQDGRISTNEMDQSAVALKNLDRDQNGSLTREELPRPPRPL 282 PPP+PF+++FDTD+D +IS E+ +A AL LD+D++G L+ EE+P P R L Sbjct: 94 PPPNPFLIVFDTDKDEKISAEEIAAAAEALSKLDKDEDGILSGEEIPDPIRDL 146 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85031.19819.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85031.19819.1 >prot_M-pyrifera_M_contig85031.19819.1 ID=prot_M-pyrifera_M_contig85031.19819.1|Name=mRNA_M-pyrifera_M_contig85031.19819.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp MLMKYLIAFVAVAGLITTGVSSQQPRGRGDRDCHCPGGPPPDPFMVLFDTback to top mRNA from alignment at M-pyrifera_M_contig85031:423..869+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85031.19819.1 ID=mRNA_M-pyrifera_M_contig85031.19819.1|Name=mRNA_M-pyrifera_M_contig85031.19819.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig85031:423..869+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85031:423..869+ >mRNA_M-pyrifera_M_contig85031.19819.1 ID=mRNA_M-pyrifera_M_contig85031.19819.1|Name=mRNA_M-pyrifera_M_contig85031.19819.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig85031:423..869+ (Macrocystis pyrifera P11B4 male)back to top |