mRNA_M-pyrifera_M_contig85026.19817.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85026.19817.1
Unique NamemRNA_M-pyrifera_M_contig85026.19817.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Match: A0A5A8DTD7_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DTD7_CAFRO)

HSP 1 Score: 298 bits (763), Expect = 4.010e-89
Identity = 160/265 (60.38%), Postives = 182/265 (68.68%), Query Frame = 1
Query:   34 QYLGGRHSDASSESLESVTALPVVVRDFTGAVTQVRVEKKIGKEQEKLL---------------QLPSKG-GGLWESFFGGNDGVED------DGRVHVFSLASGAVYERMLKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYRWPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAELWDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISALFVV 762
            Q L G  +D     +ESV +L V VRDF G VTQ+RV ++ G E  KLL               Q  S+G  G   SFFGG            D R+HVFSLASG +YER LKIMMLSV++R SRPVTFWLVENFLSP+FK+    LA   GFEV  VTY+WPNWLR QTEKQR +WGYKVLFLDVLFPL L +VI+VDADQVVR+DLAELWDLDL+GA Y  TPFC     REET G++FW  GYWKDHL GK PYHISAL+VV
Sbjct: 1536 QRLIGEEADDDEPEMESVASLEVTVRDFVGDVTQLRVRRRPGFESAKLLVEEEEEAAEVALQASQETSRGFWGSVRSFFGGKASAGSTAVAGKDDRIHVFSLASGHLYERFLKIMMLSVTKRSSRPVTFWLVENFLSPQFKETVPALAESAGFEVKMVTYKWPNWLRGQTEKQRIIWGYKVLFLDVLFPLDLDKVIYVDADQVVRADLAELWDLDLEGAPYGYTPFCTS---REETLGFQFWRQGYWKDHLRGK-PYHISALYVV 1796          
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Match: F2DY34_HORVV (Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2DY34_HORVV)

HSP 1 Score: 261 bits (667), Expect = 7.170e-82
Identity = 125/223 (56.05%), Postives = 153/223 (68.61%), Query Frame = 1
Query:  100 VVVRDFTGAVTQVRVEKKIGKEQEKLLQLPSKGGGLWESF--FGGNDGVEDDGRVHVFSLASGAVYERMLKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYRWPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAELWDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISALFVV 762
            VV+  F G + ++ V KK GK  EKL +   K GGLW+S     GN    D+  +H+FS+ASG +YER + IMM+SV +     V FW++ENF+SPEFK     LA  H FEV +V Y WP WL AQ EKQR++W YK+LFLDVLFPL + R+IFVDADQ VR D+ ELWDLD+ GA YA  PFC    R  ETKG+RFWDSG+W DHL GK PYHISAL+ V
Sbjct:  118 VVIDSFNGKLVKLNVNKKEGKGGEKLYEDVKKSGGLWDSISHMWGNKKKSDNETIHIFSVASGHLYERFMSIMMMSVVKHTKSKVKFWIIENFVSPEFKLFVPQLAKSHNFEVQFVAYNWPRWLNAQKEKQRKIWAYKILFLDVLFPLDINRIIFVDADQTVRGDIKELWDLDIGGAPYAYVPFCPADSR-PETKGFRFWDSGFWHDHLGGK-PYHISALYRV 338          
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Match: W7T4Y1_9STRA (Glycoprotein glucosyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4Y1_9STRA)

HSP 1 Score: 276 bits (705), Expect = 2.430e-81
Identity = 148/280 (52.86%), Postives = 183/280 (65.36%), Query Frame = 1
Query:    1 WKNRVTASRGLQYLGGRHSDASSESLESVTALPVVV--RDFTGAVTQVRVEKKIGKEQEKLL----QLPSKGG-------------GLW-------ESFFGGNDGVEDDGRVHVFSLASGAVYERMLKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYRWPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAELWDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISALFVV 762
            WK R+   R  +       D +  +L  V    +VV  RDFT A+  +RV+K+ GKE   LL    Q  ++GG              LW       E    G    E+D  VHVFSLA+G +YERMLKIMMLSVS+R S PV FWL+ENFLSP FK  A+ +A H+ F+V ++TY+WP+WLR QTEKQR +WGYK+LFLDVLFPL +K++I+VDADQV+R+DL ELWDLDLKG  YA TPFCD    R ET G++FW SGYW  HL G RPYHISAL+VV
Sbjct: 1379 WKVRLAEGRARELYEVVREDPTGRALVRVPEQELVVAKRDFTNALETLRVQKQAGKEDIPLLDEINQDEAEGGKEQRESKTWSTLSNLWAGRKAEVEGKPTGEGSGEEDETVHVFSLATGHLYERMLKIMMLSVSKRTSVPVKFWLLENFLSPAFKTAALAMAEHYNFQVEFITYKWPDWLRQQTEKQRIIWGYKILFLDVLFPLSVKKIIYVDADQVLRADLKELWDLDLKGRPYAYTPFCDS---RNETLGFQFWRSGYWATHLQG-RPYHISALYVV 1654          
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Match: A0A4D9CUC4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUC4_9STRA)

HSP 1 Score: 275 bits (703), Expect = 3.100e-81
Identity = 148/280 (52.86%), Postives = 182/280 (65.00%), Query Frame = 1
Query:    1 WKNRVTASRGLQYLGGRHSDASSESLESVTALPVVV--RDFTGAVTQVRVEKKIGKEQEKLL----QLPSKGG-------------GLW-------ESFFGGNDGVEDDGRVHVFSLASGAVYERMLKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYRWPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAELWDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISALFVV 762
            WK R+   R  +       D    +L  V    +VV  RDFT A+  +RV+K+ GKE   LL    Q  ++GG              LW       E    G    E+D  VHVFSLA+G +YERMLKIMMLSVS+R S PV FWL+ENFLSP FK  A+ +A H+ F+V ++TY+WP+WLR QTEKQR +WGYK+LFLDVLFPL +K++I+VDADQV+R+DL ELWDLDLKG  YA TPFCD    R ET G++FW SGYW  HL G RPYHISAL+VV
Sbjct:  991 WKVRLAEGRARELYEVVREDPMGRALVRVPEQELVVAKRDFTNALETLRVQKQAGKEDIPLLDEINQDEAEGGKEQRESKTWSTLSNLWAGRKAEVEGKPTGEGSGEEDETVHVFSLATGHLYERMLKIMMLSVSKRTSVPVKFWLLENFLSPAFKTAALAMAEHYNFQVEFITYKWPDWLRQQTEKQRIIWGYKILFLDVLFPLSVKKIIYVDADQVLRADLKELWDLDLKGRPYAYTPFCDS---RNETLGFQFWRSGYWATHLQG-RPYHISALYVV 1266          
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Match: A0A7S2S3P5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3P5_9STRA)

HSP 1 Score: 263 bits (671), Expect = 4.030e-80
Identity = 137/263 (52.09%), Postives = 170/263 (64.64%), Query Frame = 1
Query:   73 SLESVTALPVVVRDFTGAVTQVRVEKKIGKEQEKLLQ----------------------------LPSKGGGLWESF-----FGGNDGVEDDGRVHVFSLASGAVYERMLKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYRWPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAELWDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISALFVV 762
            SL  V++ PV+V  F   VTQ+RV KK G E  +LL+                            + + GGG++ S         N   ++D ++HVFSLA+G +YER LKIMMLSV +R S PV FWL ENFLSP FK+ A  +A  +GFEV +VTY+WP+WLR QT KQR +WGYK+LFLDVLFPL + +VI+VD+DQ VR DLAELW +DLKG  Y  TPFC     R+ET GY+FW  GYWKDHL GK PYHISAL+VV
Sbjct:  278 SLVPVSSHPVLVTTFYDTVTQLRVRKKRGMEDLQLLEDTPSTGEEQQPASASQTVEVQAQGPGSSVAAGGGGIFSSMSKMFSLSTNTTQQEDNKIHVFSLATGHLYERFLKIMMLSVVKRSSMPVKFWLFENFLSPTFKESAEAMAQAYGFEVAFVTYKWPSWLRQQTSKQRIIWGYKILFLDVLFPLNVNKVIYVDSDQTVRGDLAELWKMDLKGKPYGYTPFCSS---RKETLGYQFWRQGYWKDHLRGK-PYHISALYVV 536          
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Match: A0A7S2AIV0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIV0_9STRA)

HSP 1 Score: 265 bits (676), Expect = 1.870e-77
Identity = 143/276 (51.81%), Postives = 178/276 (64.49%), Query Frame = 1
Query:   31 LQYLGGRHSDASSESLESVT--ALPVVVRDFTGAVTQVRVEKKIGKEQEKLLQ----------------------LPSKG---GGLWESFFGG-----NDGVEDDGRVHVFSLASGAVYERMLKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYRWPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAELWDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISALFVV 762
            L    GR SD  S  LE  T   LPVVV  F   VTQ++V+++ GKE+ KLL                       +PS+      +  S FG      ND   D  ++HVFSLA+G +YER LKIMMLSV +R S P+ FWL EN+LSP FK+ A  +A  +GFE+ +VTY+WP+WLR QT KQR +WGYK+LFLDVLFPL + +VI+VD+DQ VR DLAELW +DLKG  YA TPFC+    ++ET GY+FW  GYWKDHL G RPYHISAL+VV
Sbjct: 1228 LNLAAGRASDLFS--LEDATDGGLPVVVTSFYDTVTQLKVKRQKGKEKIKLLDDIQQSETSEDVNAVDVSADGQVMPSQTPTFSRVSSSLFGSKPSVANDTNADKEKIHVFSLATGHLYERFLKIMMLSVVKRSSMPIKFWLFENYLSPTFKRSAEVMAEEYGFELGFVTYKWPSWLRQQTSKQRIIWGYKILFLDVLFPLNVNKVIYVDSDQTVRGDLAELWKMDLKGRPYAYTPFCES---KKETLGYQFWRQGYWKDHLRG-RPYHISALYVV 1497          
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Match: A0A7S3Y089_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y089_HETAK)

HSP 1 Score: 246 bits (627), Expect = 2.090e-77
Identity = 117/169 (69.23%), Postives = 133/169 (78.70%), Query Frame = 1
Query:  256 VHVFSLASGAVYERMLKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYRWPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAELWDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISALFVV 762
            +HVFSLA+G +YERMLKIMMLSV +R S  V FWL ENFLSP FK  A  +A   GFEV YVTY+WP WLR QTEKQR +WGYK+LFLDVLFPL +K+VI+VDADQVVR+DL ELW+LDL G  Y   PFCD    REET GY+FW SG+W DHL G RPYHISAL+VV
Sbjct:   41 IHVFSLATGHLYERMLKIMMLSVVKRSSMKVKFWLFENFLSPTFKDSAAAMAKEAGFEVGYVTYKWPEWLRQQTEKQRIIWGYKILFLDVLFPLSVKKVIYVDADQVVRADLRELWELDLGGKPYGYAPFCDS---REETLGYQFWRSGFWADHLRG-RPYHISALYVV 205          
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Match: F0YD87_AURAN (Glyco_transf_24 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD87_AURAN)

HSP 1 Score: 245 bits (625), Expect = 3.380e-77
Identity = 118/174 (67.82%), Postives = 136/174 (78.16%), Query Frame = 1
Query:  241 EDDGRVHVFSLASGAVYERMLKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYRWPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAELWDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISALFVV 762
            +D   VHVFSLA+GA+YERMLKIMMLSV +R S PV FWL EN+L+PEFK+ A  LA   GF+V YVTY+WP WLR QT KQR +WGYK+LFLDVLFPL +++VI+VDADQVVR DL ELWD D+ G  Y   PFCD    R ET GY+FW SGYWKDHL GK PYHISAL+VV
Sbjct:   35 DDLDTVHVFSLATGALYERMLKIMMLSVRKRTSGPVKFWLFENYLTPEFKRDAERLAAAKGFDVAYVTYKWPEWLRRQTVKQRIIWGYKILFLDVLFPLDVRKVIYVDADQVVRGDLRELWDTDMGGKPYGYVPFCDS---RPETLGYQFWRSGYWKDHLRGK-PYHISALYVV 204          
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Match: A0A7S3D2T3_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D2T3_9EUKA)

HSP 1 Score: 258 bits (660), Expect = 1.700e-76
Identity = 129/257 (50.19%), Postives = 172/257 (66.93%), Query Frame = 1
Query:   16 TASRGLQYLGGRHSDASSESLESVTALPVVVRDFTGAVTQVRVEKKIGKEQEKLLQLPSKGGGLWE---SFFGGNDGVED-----DGRVHVFSLASGAVYERMLKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYRWPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAELWDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISALFVV 762
            T+S  ++      S+ S+ S  +    P+ +    G V  + V K+ GKE E L+     G G+W    S +G     +D     D  ++VFSLASG +YER L++MM+SV  + S PV FWL+ENFLSP+FK     L+  + F+V YV+Y+WP WL  QTEKQR +WGYK+LFLDVLFPL +KRVI++DADQVV++D+ EL  LDL+GA YA TPFC G   R+ETKGYRFW++G+W +HL GK PYHISAL+VV
Sbjct:  595 TSSGAMKPCEHGESNDSNTSAPASALPPITMDALYGKVMHLSVSKQQGKEHESLVDEEGDGQGIWSKLSSMWGSAVASKDEIPEADKTINVFSLASGHLYERFLRVMMVSVMSKTSSPVKFWLLENFLSPQFKNSIHVLSEQYNFQVEYVSYKWPRWLHQQTEKQRIIWGYKILFLDVLFPLSVKRVIYIDADQVVQADINELHTLDLQGAPYAYTPFCQGRYARQETKGYRFWETGFWMNHLRGK-PYHISALYVV 850          
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Match: A0A7S1VKP8_9EUKA (Hypothetical protein n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VKP8_9EUKA)

HSP 1 Score: 243 bits (620), Expect = 3.040e-76
Identity = 112/169 (66.27%), Postives = 134/169 (79.29%), Query Frame = 1
Query:  256 VHVFSLASGAVYERMLKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYRWPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAELWDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISALFVV 762
            +HVFS+A+G +YER +K+MMLS  R  SRPV FW++ENF+SP FK     LA   GFEV +VTY+WP+WL  QTEKQR +W YKVLFLDVLFPL + R+IF+DAD  VR DLAEL D+DL+GA YA TPFC G  RRE+T GYRFW+SG+WKDHL GK PYHISAL+VV
Sbjct:   29 IHVFSVATGHLYERFMKVMMLSAVRSSSRPVKFWILENFVSPTFKDSVPALAASAGFEVEFVTYKWPSWLNKQTEKQRIIWAYKVLFLDVLFPLAVDRIIFLDADLTVRGDLAELADMDLQGAPYAFTPFCQGDWRREDTAGYRFWESGWWKDHLAGK-PYHISALYVV 196          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85026.19817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DTD7_CAFRO4.010e-8960.38Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
F2DY34_HORVV7.170e-8256.05Predicted protein n=1 Tax=Hordeum vulgare subsp. v... [more]
W7T4Y1_9STRA2.430e-8152.86Glycoprotein glucosyltransferase n=1 Tax=Nannochlo... [more]
A0A4D9CUC4_9STRA3.100e-8152.86Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2S3P5_9STRA4.030e-8052.09Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2AIV0_9STRA1.870e-7751.81Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3Y089_HETAK2.090e-7769.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0YD87_AURAN3.380e-7767.82Glyco_transf_24 domain-containing protein n=1 Tax=... [more]
A0A7S3D2T3_9EUKA1.700e-7650.19Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
A0A7S1VKP8_9EUKA3.040e-7666.27Hypothetical protein n=1 Tax=Sexangularia sp. CB-2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85026contigM-pyrifera_M_contig85026:2..763 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.1
Seed ortholog evalue5.4e-64
Seed eggNOG ortholog112098.XP_008615091.1
KEGG koko:K11718
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
EggNOG free text desc.UDP-glucose:glycoprotein glucosyltransferase activity
EggNOG OGsKOG1879@1,KOG1879@2759
COG Functional cat.M
CAZyGT24
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Exons1
Model size762
Cds size762
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816758.4741578-CDS-M-pyrifera_M_contig85026:1..7631622816758.4741578-CDS-M-pyrifera_M_contig85026:1..763Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85026 2..763 -
1692278161.1625068-CDS-M-pyrifera_M_contig85026:1..7631692278161.1625068-CDS-M-pyrifera_M_contig85026:1..763Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85026 2..763 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85026.19817.1prot_M-pyrifera_M_contig85026.19817.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85026 2..763 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85026.19817.1

>prot_M-pyrifera_M_contig85026.19817.1 ID=prot_M-pyrifera_M_contig85026.19817.1|Name=mRNA_M-pyrifera_M_contig85026.19817.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
WKNRVTASRGLQYLGGRHSDASSESLESVTALPVVVRDFTGAVTQVRVEK
KIGKEQEKLLQLPSKGGGLWESFFGGNDGVEDDGRVHVFSLASGAVYERM
LKIMMLSVSRRCSRPVTFWLVENFLSPEFKKRAVTLANHHGFEVNYVTYR
WPNWLRAQTEKQRQVWGYKVLFLDVLFPLRLKRVIFVDADQVVRSDLAEL
WDLDLKGAAYAMTPFCDGSRRREETKGYRFWDSGYWKDHLNGKRPYHISA
LFVV
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mRNA from alignment at M-pyrifera_M_contig85026:2..763-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85026.19817.1 ID=mRNA_M-pyrifera_M_contig85026.19817.1|Name=mRNA_M-pyrifera_M_contig85026.19817.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig85026:2..763- (Macrocystis pyrifera P11B4 male)
TGGAAGAATCGAGTGACTGCGTCGCGTGGCTTGCAATATCTGGGAGGACG ACATAGTGATGCATCATCCGAGTCTCTTGAATCTGTCACAGCACTTCCAG TCGTTGTACGAGATTTCACAGGCGCTGTGACGCAAGTGCGTGTGGAAAAG AAGATTGGAAAGGAGCAAGAGAAGCTCCTGCAGCTTCCAAGCAAAGGAGG TGGGTTGTGGGAGAGTTTCTTTGGTGGAAATGATGGAGTGGAAGATGATG GAAGAGTGCATGTGTTTAGTCTTGCTTCTGGAGCCGTGTATGAACGCATG TTGAAGATCATGATGCTCTCTGTATCTCGTCGTTGTTCCCGACCTGTGAC GTTTTGGCTGGTTGAAAACTTTTTGAGTCCAGAATTCAAGAAGCGCGCTG TAACACTGGCAAACCACCACGGCTTTGAAGTAAACTATGTGACATATCGA TGGCCAAATTGGTTGCGTGCTCAAACTGAAAAGCAACGCCAAGTGTGGGG ATACAAGGTATTGTTCCTTGACGTCCTCTTCCCTCTTCGATTGAAGCGTG TCATCTTTGTAGATGCCGATCAAGTCGTTCGATCTGACCTTGCAGAATTG TGGGATCTTGATCTGAAAGGAGCAGCATATGCAATGACACCATTTTGTGA CGGATCAAGGAGGCGGGAAGAAACCAAGGGGTATCGGTTTTGGGATTCTG GATATTGGAAAGATCATCTCAATGGCAAGCGCCCCTACCACATTTCTGCA CTTTTCGTTGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85026:2..763-

>mRNA_M-pyrifera_M_contig85026.19817.1 ID=mRNA_M-pyrifera_M_contig85026.19817.1|Name=mRNA_M-pyrifera_M_contig85026.19817.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig85026:2..763- (Macrocystis pyrifera P11B4 male)
TGGAAGAATCGAGTGACTGCGTCGCGTGGCTTGCAATATCTGGGAGGACG
ACATAGTGATGCATCATCCGAGTCTCTTGAATCTGTCACAGCACTTCCAG
TCGTTGTACGAGATTTCACAGGCGCTGTGACGCAAGTGCGTGTGGAAAAG
AAGATTGGAAAGGAGCAAGAGAAGCTCCTGCAGCTTCCAAGCAAAGGAGG
TGGGTTGTGGGAGAGTTTCTTTGGTGGAAATGATGGAGTGGAAGATGATG
GAAGAGTGCATGTGTTTAGTCTTGCTTCTGGAGCCGTGTATGAACGCATG
TTGAAGATCATGATGCTCTCTGTATCTCGTCGTTGTTCCCGACCTGTGAC
GTTTTGGCTGGTTGAAAACTTTTTGAGTCCAGAATTCAAGAAGCGCGCTG
TAACACTGGCAAACCACCACGGCTTTGAAGTAAACTATGTGACATATCGA
TGGCCAAATTGGTTGCGTGCTCAAACTGAAAAGCAACGCCAAGTGTGGGG
ATACAAGGTATTGTTCCTTGACGTCCTCTTCCCTCTTCGATTGAAGCGTG
TCATCTTTGTAGATGCCGATCAAGTCGTTCGATCTGACCTTGCAGAATTG
TGGGATCTTGATCTGAAAGGAGCAGCATATGCAATGACACCATTTTGTGA
CGGATCAAGGAGGCGGGAAGAAACCAAGGGGTATCGGTTTTGGGATTCTG
GATATTGGAAAGATCATCTCAATGGCAAGCGCCCCTACCACATTTCTGCA
CTTTTCGTTGTTTGGAAGAATCGAGTGACTGCGTCGCGTGGCTTGCAATA
TCTGGGAGGACGACATAGTGATGCATCATCCGAGTCTCTTGAATCTGTCA
CAGCACTTCCAGTCGTTGTACGAGATTTCACAGGCGCTGTGACGCAAGTG
CGTGTGGAAAAGAAGATTGGAAAGGAGCAAGAGAAGCTCCTGCAGCTTCC
AAGCAAAGGAGGTGGGTTGTGGGAGAGTTTCTTTGGTGGAAATGATGGAG
TGGAAGATGATGGAAGAGTGCATGTGTTTAGTCTTGCTTCTGGAGCCGTG
TATGAACGCATGTTGAAGATCATGATGCTCTCTGTATCTCGTCGTTGTTC
CCGACCTGTGACGTTTTGGCTGGTTGAAAACTTTTTGAGTCCAGAATTCA
AGAAGCGCGCTGTAACACTGGCAAACCACCACGGCTTTGAAGTAAACTAT
GTGACATATCGATGGCCAAATTGGTTGCGTGCTCAAACTGAAAAGCAACG
CCAAGTGTGGGGATACAAGGTATTGTTCCTTGACGTCCTCTTCCCTCTTC
GATTGAAGCGTGTCATCTTTGTAGATGCCGATCAAGTCGTTCGATCTGAC
CTTGCAGAATTGTGGGATCTTGATCTGAAAGGAGCAGCATATGCAATGAC
ACCATTTTGTGACGGATCAAGGAGGCGGGAAGAAACCAAGGGGTATCGGT
TTTGGGATTCTGGATATTGGAAAGATCATCTCAATGGCAAGCGCCCCTAC
CACATTTCTGCACTTTTCGTTGTT
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