mRNA_M-pyrifera_M_contig84823.19762.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84823.19762.1
Unique NamemRNA_M-pyrifera_M_contig84823.19762.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Match: A0A3D5DBC9_9GAMM (Gluconolactonase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DBC9_9GAMM)

HSP 1 Score: 362 bits (929), Expect = 1.340e-123
Identity = 176/265 (66.42%), Postives = 205/265 (77.36%), Query Frame = 1
Query:    1 RWHDGELWFSDMWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIVSMANRTVYRLENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLFNEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHRLTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRVVDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRARIETVTVAIPGAGSP 795
            RWH+GELWFSDMW HKV R+ P+G ++ V+ VP RPSGLGFMPDGT LI SMA+R VY+   G L  HA L   V  D+ND+I+D  GR YVGNFGYDL +  +P+ A LVLIEP G HRVV   L FPNGMVL +D   L+VAETF ++LTAFD   +G   NRRV A++G+ TPDGICLDIEGGIWVASFMTGDF+RVVDGG+ITD+  V   KAAVACQIGGPDNRTLYCLTF GE+AD++  +R ARIETVTV I GAGSP
Sbjct:   20 RWHNGELWFSDMWGHKVHRITPAGVVSDVIDVPGRPSGLGFMPDGTLLIASMADRCVYKNNQGNLEVHADLSATVNADINDIIIDKQGRTYVGNFGYDLLSGADPKEAELVLIEPTGEHRVVTSGLMFPNGMVLMDDERTLIVAETFSNQLTAFDCDTNGDLRNRRVFADMGELTPDGICLDIEGGIWVASFMTGDFVRVVDGGDITDRIKV-DSKAAVACQIGGPDNRTLYCLTFAGEMADLSAGKRLARIETVTVDIQGAGSP 283          
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Match: A0A523PGP7_9PROT (Gluconolactonase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PGP7_9PROT)

HSP 1 Score: 353 bits (906), Expect = 1.480e-120
Identity = 168/254 (66.14%), Postives = 204/254 (80.31%), Query Frame = 1
Query:   34 MWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIVSMANRTVYRLENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLFNEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHRLTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRVVDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRARIETVTVAIPGAGSP 795
            MW H+V R+   G +T +V VP+RPSGLGFMPDGT LI SMA+R+VYR E+G+LV HA L + VG D+ND++VD  GR YVGNFGYDLF+  EP +A +VLIEPDGSHR+VA  L FPNGMVL+N+G  LVVAETFGHRLTAFDR  DG+  NRR+ A+LG+ TPDGICLD+EGGIWVAS+MTG+F+RV DGGEITD+F V   +AAVACQ+GG D  TLYC+T+ G++ D+A   R ARIETVTV +PGA SP
Sbjct:    1 MWGHQVHRISIDGSVTDIVAVPQRPSGLGFMPDGTLLIASMADRSVYRYESGSLVLHADLSNTVGADINDMVVDDQGRIYVGNFGYDLFSGAEPADAEIVLIEPDGSHRIVASGLMFPNGMVLSNNGNVLVVAETFGHRLTAFDRDDDGNLNNRRIFADLGEMTPDGICLDVEGGIWVASYMTGEFVRVRDGGEITDRFEVAD-RAAVACQLGGKDQCTLYCMTYSGQLEDVASGARLARIETVTVDVPGAASP 253          
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Match: A0A496XD19_9GAMM (Gluconolactonase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XD19_9GAMM)

HSP 1 Score: 304 bits (779), Expect = 8.280e-101
Identity = 147/265 (55.47%), Postives = 191/265 (72.08%), Query Frame = 1
Query:    1 RWHDGELWFSDMWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIVSMANRTVYRLENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLFNEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHRLTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRVVDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRARIETVTVAIPGAGSP 795
            RWHDG+LW SDM+   V  + P G    VV +P RPSG+ FMPDG+ +IVSM +R + RL++G L E+A L   +  D+ND +  + G  YVG FGYD+F  EEP+ ATL L++PDG+ + VA+D+ FPNG V+T DG  L++AETF  R++AFD + DGS TNRRV AELG YTPDGICLD EG IWV++F  G+FIRV+DGGEIT K   G G+ AVAC +GG D +TL+CL ++G++ DI K  R A+IET TV + GAGSP
Sbjct:   20 RWHDGKLWVSDMFGLTVYTVTPEGTKEAVVELPNRPSGINFMPDGSVVIVSMGDRKLMRLQDGELSEYADLSADLAYDINDCVCAANGNIYVGTFGYDVFAHEEPKPATLTLVKPDGTIKTVAEDIHFPNGAVITPDGKTLIIAETFVCRISAFDIEEDGSLTNRRVFAELGHYTPDGICLDQEGAIWVSAFDQGEFIRVLDGGEITHKIDTG-GRRAVACNLGGADGKTLFCLIYDGDLDDIPKGARNAKIETATVEVAGAGSP 283          
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Match: A0A3D3T458_9GAMM (Gluconolactonase n=3 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A3D3T458_9GAMM)

HSP 1 Score: 296 bits (759), Expect = 8.980e-98
Identity = 143/265 (53.96%), Postives = 188/265 (70.94%), Query Frame = 1
Query:    1 RWHDGELWFSDMWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIVSMANRTVYRLENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLFNEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHRLTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRVVDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRARIETVTVAIPGAGSP 795
            RWHDG LW SDM+   V  + P G    VV +P RPSGL FMPDG+ +IVSMA+R + R   G L E+A L   +  D+ND +  S G  YVG FGYD+F  E+P+ ATL L++ DG+ + VA+D+ FPNG+V+T DG  L++AETF +++TAFDR  DG+ +NRRV A+LGDYTPDGICLD EG +WV++F  G+FIRV DGGEI+ K   G G+ AVAC +GG D +TL+CL ++G++ DI K  R A+IET  V + GAGSP
Sbjct:   20 RWHDGRLWLSDMFGATVYAVSPDGAKEAVVELPNRPSGLNFMPDGSLVIVSMADRKLMRWHGGELTEYADLSANLAYDINDSVCASNGDIYVGTFGYDVFAHEDPKPATLTLVKADGTVKTVAEDIHFPNGVVITPDGKTLIIAETFVNKVTAFDRAEDGTLSNRRVFADLGDYTPDGICLDQEGAVWVSAFEQGEFIRVHDGGEISAKIDTG-GRRAVACNLGGDDGKTLFCLIYDGDLDDIPKGARNAKIETARVDVAGAGSP 283          
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Match: A0A1Y5FZR9_9GAMM (SGL domain-containing protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Y5FZR9_9GAMM)

HSP 1 Score: 294 bits (753), Expect = 7.550e-97
Identity = 145/266 (54.51%), Postives = 189/266 (71.05%), Query Frame = 1
Query:    1 RWHDGELWFSDMWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIVSMANRTVYRL-ENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLFNEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHRLTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRVVDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRARIETVTVAIPGAGSP 795
            RWHDG+LW SDM+ + V  +   G+ T + T P RPSG+ FMPDG+ ++VSMA+R +  L ENGAL E+A L   +  D+ND +    G  YVG FGYD+F  +EP+ ATL L++ DG+ + VA+++ FPNG V+T DG  L+VAETF  RLTAF+ +ADG+ T RR  AELGDYTPDGICLD EG IWVA+F  G+FIRV+DGGE+T K   G  + AVAC +GG D +TLYCL ++G + DI + +R A IET TV + GAGSP
Sbjct:   20 RWHDGKLWVSDMFGNTVYTITTDGQRTAMATFPNRPSGINFMPDGSVVVVSMADRKLMTLGENGALSEYADLSGILEYDINDCVCAPNGDIYVGTFGYDVFAHQEPKPATLTLVKADGTIQTVAENVHFPNGAVITPDGKTLIVAETFVGRLTAFNIEADGTLTGRRAFAELGDYTPDGICLDAEGAIWVAAFENGEFIRVLDGGEVTHKIDTGD-RRAVACNLGGVDGKTLYCLIYDGNLDDIPEGKRNALIETATVDVAGAGSP 284          
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Match: A0A2A4LY92_9GAMM (Gluconolactonase n=1 Tax=Cellvibrionales bacterium TaxID=2026722 RepID=A0A2A4LY92_9GAMM)

HSP 1 Score: 295 bits (755), Expect = 9.780e-97
Identity = 145/265 (54.72%), Postives = 185/265 (69.81%), Query Frame = 1
Query:    1 RWHDGELWFSDMWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIVSMANRTVYRLENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLFNEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHRLTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRVVDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRARIETVTVAIPGAGSP 795
            RWH+G L+ SD+W  KV  +  +GE   +V VP RPSGLG++PD T +IVSMA+R + R +   LV HA L    GGD+ND++VD+ GRAYVGN GYD+FN E  R A ++++ P+G  RVVA+D+  PNG V+T+DG  LVVAET    LTAFD  ADG   NRR+ A+LGD  PDGICLD+ GGIWVA F    F+RV DGGEIT + +    + AVACQ+GG D RTL+CLTF+G + D+ K   R++IETV V   GAGSP
Sbjct:   50 RWHNGRLYTSDIWGEKVYAVTEAGEREVIVEVPTRPSGLGWLPDDTMIIVSMADRKLMRWQGERLVTHADLSQFAGGDLNDMVVDAQGRAYVGNMGYDIFNREPYRTANIIMVSPEGEARVVAEDMGGPNGPVITSDGKTLVVAETTNACLTAFDITADGGLENRRIFADLGDRRPDGICLDVXGGIWVADFXGNXFVRVEDGGEITHQVNC-RSRRAVACQLGGADMRTLFCLTFDGTLRDVGKGGTRSQIETVAVESAGAGSP 313          
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Match: UPI00123A9C1E (SMP-30/gluconolactonase/LRE family protein n=1 Tax=Sphingobium estronivorans TaxID=1577690 RepID=UPI00123A9C1E)

HSP 1 Score: 293 bits (750), Expect = 2.010e-96
Identity = 147/263 (55.89%), Postives = 177/263 (67.30%), Query Frame = 1
Query:    1 RWHDGELWFSDMWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIVSMANRTVYRLENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLFNEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHRLTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRVVDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRARIETVTVAIPGAG 789
            RWH G LW SDMW H+V R+   G   TV  VP RPSGLGF+PDGT L+VSMA+R V R+E GAL  HA L     GD ND+ VD  GRAYVG+FGYDLF+   P  A L+L+EPDGS RV A  + FPNG  L  +G  LVVAET+  RL AFDR ADGS + RR+ A L D +PDGIC D E G+WVA + T +FIRV   G+ITD+ +VG  + AVAC +GG D RTL+C TF G+ A +    R A +ETV V +PG G
Sbjct:   20 RWHRGALWVSDMWGHEVLRLSQDGARETVCAVPNRPSGLGFLPDGTPLVVSMADRRVMRIEGGALALHADLSALASGDCNDMWVDPQGRAYVGHFGYDLFSGAPPAKADLILVEPDGSARVAAPQMDFPNGTALLEEGRLLVVAETWAQRLIAFDRDADGSLSGRRLYAGLKDRSPDGICADAEDGLWVACYDTNEFIRVGKDGQITDRVAVGE-RNAVACALGGEDGRTLFCCTFVGDYAGVTSGSRGAAVETVRVEVPGQG 281          
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Match: A0A496WZL6_9GAMM (Gluconolactonase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496WZL6_9GAMM)

HSP 1 Score: 291 bits (745), Expect = 1.190e-95
Identity = 142/265 (53.58%), Postives = 191/265 (72.08%), Query Frame = 1
Query:    1 RWHDGELWFSDMWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIVSMANRTVYRLENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLFNEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHRLTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRVVDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRARIETVTVAIPGAGSP 795
            RW DG LW SD+   KV  + P G  TT+  VP+RPSG+GF+ DGT +IVSM +R + R+ENG L+ HA +   V G++ND++VD  G AYVG+ GYDLF  E+ +   LVL++ +G  + VAD L FPNG V+T DG  LVVAE++G RLTAF+ + DG+ + +RV A+LGDYTPDGI LD EGGIW+A+F    F+RV DGGEITD   + PG+ AVAC +GG D +TLYC+TF+G++ DI K ++ +R+ET+ V + GAGSP
Sbjct:   20 RWRDGLLWVSDVNGKKVYTIAPDGTATTMAEVPDRPSGIGFLTDGTPVIVSMRDRCLKRIENGKLILHADISALVKGEINDMVVDKKGNAYVGSMGYDLFAGEDFKPGALVLVKANGEAQEVADGLHFPNGPVVTPDGKTLVVAESWGKRLTAFNIEDDGTLSGQRVFADLGDYTPDGITLDEEGGIWLAAFANDCFVRVKDGGEITDVIDL-PGRRAVACTLGGEDMKTLYCMTFDGKMEDIGKGKKASRVETIRVKVAGAGSP 283          
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Match: A0A1Y5FUY6_9GAMM (Gluconolactonase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Y5FUY6_9GAMM)

HSP 1 Score: 290 bits (743), Expect = 2.400e-95
Identity = 146/265 (55.09%), Postives = 188/265 (70.94%), Query Frame = 1
Query:    1 RWHDGELWFSDMWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIVSMANRTVYRLENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLFNEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHRLTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRVVDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRARIETVTVAIPGAGSP 795
            RW +G LW SD+ D KV  + P GE   +  V  RPSG+GF+PDGT L+VSM + T+ R++   L  H  +   V G++ND++VD  G AYVG+ GYDLF  E+    TLVL++PDGS R VADDL FPNG V++ DG  LVVAE++G RL+AF  + DG  +NRRV A+LGDYTPDGI LD EGGIW+A+F    F+RV DGGEITD   V P + AVAC +GG D +TLYCLTF+G+++DI K +R +RIETV V + G+GSP
Sbjct:   20 RWRNGLLWVSDVNDKKVYTITPEGERKVMAEVSNRPSGIGFLPDGTPLVVSMRDNTLRRIKGDELPIHGDVSALVKGEINDMVVDKKGNAYVGSMGYDLFRGEKFAPGTLVLVKPDGSVREVADDLHFPNGPVVSPDGKMLVVAESWGKRLSAFTIEDDGLLSNRRVFADLGDYTPDGITLDEEGGIWLAAFANDAFVRVKDGGEITDVIEV-PDRRAVACTLGGDDMKTLYCLTFDGQMSDIGKGKRASRIETVRVDVAGSGSP 283          
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Match: A0A1X9YB55_9SPHN (5-valerolactone hydrolase n=1 Tax=Sphingomonas sp. KC8 TaxID=1030157 RepID=A0A1X9YB55_9SPHN)

HSP 1 Score: 289 bits (739), Expect = 9.390e-95
Identity = 144/263 (54.75%), Postives = 174/263 (66.16%), Query Frame = 1
Query:    1 RWHDGELWFSDMWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIVSMANRTVYRLENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLFNEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHRLTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRVVDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRARIETVTVAIPGAG 789
            RW D  LW SDMW H+V R+   G   TV TVPERPSGLGF+PDGT L+VSM  R V R+ENG LV HA L    GGD ND+IVD  G AYVGNFGYDLF    P  A L+ I+  G  R VA  L FPNGMVL  +G  LVVAE++  RL AFDR  DGS ++RRV A+LG  +PDGI +D E GIWVA + T +F+RV +GG ITD+  + PG+ A+AC +GGPD RTL+C TF G+   +    R + IE   V +P  G
Sbjct:   20 RWRDDALWVSDMWGHEVLRVTMDGVRETVCTVPERPSGLGFLPDGTLLVVSMVGRRVMRVENGELVLHADLSGLAGGDCNDMIVDETGAAYVGNFGYDLFGGATPAKADLIAIDRAGVARTVASALEFPNGMVLVEEGRTLVVAESWARRLLAFDRHTDGSLSHRRVYADLGGRSPDGIAVDAEDGIWVACYDTDEFVRVREGGVITDRIPI-PGRHAIACALGGPDGRTLFCCTFSGDYTQMGTGARNSAIEIARVDVPAPG 281          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84823.19762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DBC9_9GAMM1.340e-12366.42Gluconolactonase n=1 Tax=Gammaproteobacteria bacte... [more]
A0A523PGP7_9PROT1.480e-12066.14Gluconolactonase n=1 Tax=Proteobacteria bacterium ... [more]
A0A496XD19_9GAMM8.280e-10155.47Gluconolactonase n=1 Tax=Gammaproteobacteria bacte... [more]
A0A3D3T458_9GAMM8.980e-9853.96Gluconolactonase n=3 Tax=Porticoccaceae bacterium ... [more]
A0A1Y5FZR9_9GAMM7.550e-9754.51SGL domain-containing protein n=3 Tax=Gammaproteob... [more]
A0A2A4LY92_9GAMM9.780e-9754.72Gluconolactonase n=1 Tax=Cellvibrionales bacterium... [more]
UPI00123A9C1E2.010e-9655.89SMP-30/gluconolactonase/LRE family protein n=1 Tax... [more]
A0A496WZL6_9GAMM1.190e-9553.58Gluconolactonase n=2 Tax=Gammaproteobacteria bacte... [more]
A0A1Y5FUY6_9GAMM2.400e-9555.09Gluconolactonase n=4 Tax=Gammaproteobacteria TaxID... [more]
A0A1X9YB55_9SPHN9.390e-9554.755-valerolactone hydrolase n=1 Tax=Sphingomonas sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84823contigM-pyrifera_M_contig84823:75..872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score288.1
Seed ortholog evalue4.2e-75
Seed eggNOG ortholog1030157.AFMP01000008_gene3164
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SMP-30/Gluconolaconase/LRE-like region
EggNOG OGs1QN8Y@1224,2K5NA@204457,2U82N@28211,COG3386@1,COG3386@2
COG Functional cat.G
Best tax levelSphingomonadales
Best eggNOG OGNA|NA|NA
Exons1
Model size798
Cds size798
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816755.0914884-CDS-M-pyrifera_M_contig84823:74..8721622816755.0914884-CDS-M-pyrifera_M_contig84823:74..872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84823 75..872 -
1692278158.955731-CDS-M-pyrifera_M_contig84823:74..8721692278158.955731-CDS-M-pyrifera_M_contig84823:74..872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84823 75..872 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84823.19762.1prot_M-pyrifera_M_contig84823.19762.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84823 75..872 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84823.19762.1

>prot_M-pyrifera_M_contig84823.19762.1 ID=prot_M-pyrifera_M_contig84823.19762.1|Name=mRNA_M-pyrifera_M_contig84823.19762.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
RWHDGELWFSDMWDHKVKRMLPSGEITTVVTVPERPSGLGFMPDGTALIV
SMANRTVYRLENGALVEHAALGDAVGGDVNDLIVDSAGRAYVGNFGYDLF
NEEEPRNATLVLIEPDGSHRVVADDLSFPNGMVLTNDGAGLVVAETFGHR
LTAFDRKADGSRTNRRVCAELGDYTPDGICLDIEGGIWVASFMTGDFIRV
VDGGEITDKFSVGPGKAAVACQIGGPDNRTLYCLTFEGEIADIAKLERRA
RIETVTVAIPGAGSP*
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mRNA from alignment at M-pyrifera_M_contig84823:75..872-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84823.19762.1 ID=mRNA_M-pyrifera_M_contig84823.19762.1|Name=mRNA_M-pyrifera_M_contig84823.19762.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig84823:75..872- (Macrocystis pyrifera P11B4 male)
CGCTGGCACGACGGCGAACTGTGGTTTTCGGACATGTGGGATCACAAAGT GAAGCGCATGTTGCCGAGCGGCGAGATCACCACCGTGGTGACCGTACCGG AGCGCCCGTCCGGACTCGGCTTCATGCCCGACGGCACCGCGTTGATCGTG TCGATGGCGAACCGCACGGTTTATCGTCTCGAGAACGGCGCGCTCGTCGA ACACGCGGCACTCGGCGATGCAGTCGGCGGCGACGTCAACGACCTCATCG TCGACAGCGCCGGACGCGCGTATGTCGGCAACTTCGGCTACGACCTGTTC AACGAGGAAGAACCGCGCAACGCAACGCTCGTGCTCATCGAACCCGACGG TTCACATCGGGTCGTTGCCGATGATCTCTCGTTTCCGAACGGCATGGTGC TGACGAACGACGGTGCTGGCCTCGTCGTCGCGGAAACGTTCGGACATCGC CTCACGGCGTTCGATCGCAAGGCGGACGGCAGTCGCACGAATCGCCGCGT GTGCGCGGAACTCGGGGACTACACGCCCGATGGTATCTGCCTCGACATCG AGGGCGGGATCTGGGTTGCCTCGTTCATGACCGGCGACTTCATCCGCGTC GTCGATGGCGGCGAGATCACGGACAAATTCAGCGTCGGTCCCGGCAAGGC AGCCGTCGCCTGCCAGATCGGCGGGCCGGACAACCGCACGCTGTACTGCC TCACGTTCGAGGGCGAAATCGCCGACATCGCGAAACTCGAACGGCGGGCC CGGATCGAAACCGTGACGGTGGCCATACCCGGCGCCGGTTCACCGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84823:75..872-

>mRNA_M-pyrifera_M_contig84823.19762.1 ID=mRNA_M-pyrifera_M_contig84823.19762.1|Name=mRNA_M-pyrifera_M_contig84823.19762.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig84823:75..872- (Macrocystis pyrifera P11B4 male)
CGCTGGCACGACGGCGAACTGTGGTTTTCGGACATGTGGGATCACAAAGT
GAAGCGCATGTTGCCGAGCGGCGAGATCACCACCGTGGTGACCGTACCGG
AGCGCCCGTCCGGACTCGGCTTCATGCCCGACGGCACCGCGTTGATCGTG
TCGATGGCGAACCGCACGGTTTATCGTCTCGAGAACGGCGCGCTCGTCGA
ACACGCGGCACTCGGCGATGCAGTCGGCGGCGACGTCAACGACCTCATCG
TCGACAGCGCCGGACGCGCGTATGTCGGCAACTTCGGCTACGACCTGTTC
AACGAGGAAGAACCGCGCAACGCAACGCTCGTGCTCATCGAACCCGACGG
TTCACATCGGGTCGTTGCCGATGATCTCTCGTTTCCGAACGGCATGGTGC
TGACGAACGACGGTGCTGGCCTCGTCGTCGCGGAAACGTTCGGACATCGC
CTCACGGCGTTCGATCGCAAGGCGGACGGCAGTCGCACGAATCGCCGCGT
GTGCGCGGAACTCGGGGACTACACGCCCGATGGTATCTGCCTCGACATCG
AGGGCGGGATCTGGGTTGCCTCGTTCATGACCGGCGACTTCATCCGCGTC
GTCGATGGCGGCGAGATCACGGACAAATTCAGCGTCGGTCCCGGCAAGGC
AGCCGTCGCCTGCCAGATCGGCGGGCCGGACAACCGCACGCTGTACTGCC
TCACGTTCGAGGGCGAAATCGCCGACATCGCGAAACTCGAACGGCGGGCC
CGGATCGAAACCGTGACGGTGGCCATACCCGGCGCCGGTTCACCGTAGCG
CTGGCACGACGGCGAACTGTGGTTTTCGGACATGTGGGATCACAAAGTGA
AGCGCATGTTGCCGAGCGGCGAGATCACCACCGTGGTGACCGTACCGGAG
CGCCCGTCCGGACTCGGCTTCATGCCCGACGGCACCGCGTTGATCGTGTC
GATGGCGAACCGCACGGTTTATCGTCTCGAGAACGGCGCGCTCGTCGAAC
ACGCGGCACTCGGCGATGCAGTCGGCGGCGACGTCAACGACCTCATCGTC
GACAGCGCCGGACGCGCGTATGTCGGCAACTTCGGCTACGACCTGTTCAA
CGAGGAAGAACCGCGCAACGCAACGCTCGTGCTCATCGAACCCGACGGTT
CACATCGGGTCGTTGCCGATGATCTCTCGTTTCCGAACGGCATGGTGCTG
ACGAACGACGGTGCTGGCCTCGTCGTCGCGGAAACGTTCGGACATCGCCT
CACGGCGTTCGATCGCAAGGCGGACGGCAGTCGCACGAATCGCCGCGTGT
GCGCGGAACTCGGGGACTACACGCCCGATGGTATCTGCCTCGACATCGAG
GGCGGGATCTGGGTTGCCTCGTTCATGACCGGCGACTTCATCCGCGTCGT
CGATGGCGGCGAGATCACGGACAAATTCAGCGTCGGTCCCGGCAAGGCAG
CCGTCGCCTGCCAGATCGGCGGGCCGGACAACCGCACGCTGTACTGCCTC
ACGTTCGAGGGCGAAATCGCCGACATCGCGAAACTCGAACGGCGGGCCCG
GATCGAAACCGTGACGGTGGCCATACCCGGCGCCGGTTCACCGTAG
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