mRNA_M-pyrifera_M_contig84792.19757.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84792.19757.1
Unique NamemRNA_M-pyrifera_M_contig84792.19757.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Match: UPI001D04A61F (uncharacterized protein n=1 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D04A61F)

HSP 1 Score: 57.8 bits (138), Expect = 8.650e-8
Identity = 36/84 (42.86%), Postives = 45/84 (53.57%), Query Frame = 1
Query:   10 WICDSGASTHMTPFADCMINYRECNLTLRIADGSTRAIEGYGDVSVVFRSGNGP-VQVLLTNVAHVPDL-RYHLFSLPTLVKNG 255
            WI DSGA++H+TPF D +IN R     +R ADG+  A+ G G  S      +G    +LLTNV  VP L    L S   L K G
Sbjct:  293 WILDSGATSHVTPFQDQLINIRPHTGNVRTADGTNHAVTGIGSASFSCHLPDGSRSSILLTNVLLVPTLGNVGLVSETVLDKKG 376          
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Match: UPI001D048474 (uncharacterized protein n=1 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D048474)

HSP 1 Score: 56.2 bits (134), Expect = 3.220e-7
Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = 1
Query:   10 WICDSGASTHMTPFADCMINYRECNLTLRIADGSTRAIEGYGDVSVVFRSGNGP-VQVLLTNVAHVPDL-RYHLFSLPTLVKNG 255
            WI DSGA++H+TPF D +I+ R     +R ADG+  A+ G G  S  +   +G    +LLT+V  VP L    L S   L K G
Sbjct:  304 WILDSGATSHVTPFQDQLIDIRPHTGNVRTADGTNHAVTGMGSASFSYHLPDGSRSSILLTDVLLVPTLGNVGLISETVLDKKG 387          
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Match: UPI001D03BA43 (uncharacterized protein n=3 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D03BA43)

HSP 1 Score: 55.8 bits (133), Expect = 4.280e-7
Identity = 35/84 (41.67%), Postives = 45/84 (53.57%), Query Frame = 1
Query:   10 WICDSGASTHMTPFADCMINYRECNLTLRIADGSTRAIEGYGDVSVVFRSGNGP-VQVLLTNVAHVPDL-RYHLFSLPTLVKNG 255
            WI DSGA++H+TPF D +IN R     +R ADG+  A+ G G  S      +G    +LLT+V  VP L    L S   L K G
Sbjct:  304 WILDSGATSHVTPFQDQLINIRPHTGNVRTADGTNHAVTGMGSASFSCHLPDGSRSSILLTDVLLVPTLGNVGLVSETVLDKKG 387          
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Match: A0A0D7BDN6_9AGAR (Uncharacterized protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BDN6_9AGAR)

HSP 1 Score: 55.8 bits (133), Expect = 4.320e-7
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query:   10 WICDSGASTHMTPFADCMINYRECNLTLRIADGSTRAIEGYGDVSVVFRSGNGPVQVLLTNVAHVPDLRYHLFSLPTLVK 249
            WI D+GA+ HMTP      +Y      +++AD S    EG G  SVVF +  G V++ +T+V HVP LR +LFS   LV+
Sbjct:  270 WIVDTGATRHMTPHRPWFTSYARKTTPIQLADNSIIYGEGVG--SVVFTTQEG-VELEITDVLHVPQLRNNLFSPFFLVR 346          
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Match: A0A2G3AQ37_CAPCH (Uncharacterized protein n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3AQ37_CAPCH)

HSP 1 Score: 55.1 bits (131), Expect = 5.670e-7
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 1
Query:   10 WICDSGASTHMTPFADCMINYREC-NLTLRIADGSTRAIEGYGDVSVVFRSGNGPVQVLLTNVAHVPDLRYHLFSLPTLVKNG 255
            WI DSGA+ HMTPF D ++++ E    ++ +AD    ++EG G+V +      G   + L +V+ VP+L  +L S+  L K G
Sbjct:  131 WIVDSGATHHMTPFIDILVDFDETIKGSVVVADERKTSVEGKGNVVLKLAEKYGNKNLKLNDVSFVPNLDCNLLSVKQLDKRG 213          
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Match: A0A4S4KAZ0_9AGAM (Uncharacterized protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KAZ0_9AGAM)

HSP 1 Score: 54.3 bits (129), Expect = 1.480e-6
Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 1
Query:   19 DSGASTHMTPFADCMINYRECN-LTLRIADGSTRAIEGYGDVSVVFRSGNGPVQVLLTNVAHVPDLRYHLFSLPTLVKNGH 258
            DSGAS H+TP  + ++N R CN +++R A+GST      G++++V  +GN    + L NV + P +   L S+  L  +G+
Sbjct:  417 DSGASLHLTPEKERLLNIRSCNPVSIRAANGSTFQANLEGELNLVIPNGNNRSVIPLRNVKYAPAMHSTLISISKLDADGY 497          
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Match: UPI001D03F304 (uncharacterized protein n=2 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D03F304)

HSP 1 Score: 53.9 bits (128), Expect = 2.010e-6
Identity = 34/84 (40.48%), Postives = 45/84 (53.57%), Query Frame = 1
Query:   10 WICDSGASTHMTPFADCMINYRECNLTLRIADGSTRAIEGYGDVSVVFRSGNGP-VQVLLTNVAHVPDL-RYHLFSLPTLVKNG 255
            WI DSGA++H+TPF D +I+ R     +R ADG+  A+ G G  S      +G    +LLT+V  VP L    L S   L K G
Sbjct:  304 WILDSGATSHVTPFQDQLIDIRPHTGNVRTADGTNHAVTGMGSASFSCHLPDGSRSSILLTDVLLVPTLGNVGLVSETVLDKKG 387          
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Match: UPI001D037AE5 (uncharacterized protein n=22 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D037AE5)

HSP 1 Score: 53.9 bits (128), Expect = 2.080e-6
Identity = 34/84 (40.48%), Postives = 45/84 (53.57%), Query Frame = 1
Query:   10 WICDSGASTHMTPFADCMINYRECNLTLRIADGSTRAIEGYGDVSVVFRSGNGP-VQVLLTNVAHVPDL-RYHLFSLPTLVKNG 255
            WI DSGA++H+TPF D +I+ R     +R ADG+  A+ G G  S      +G    +LLT+V  VP L    L S   L K G
Sbjct:  304 WILDSGATSHVTPFQDQLIDIRPHTGNVRTADGTNHAVTGMGSASFSCHLPDGSRSSILLTDVLLVPTLGNVGLVSETVLDKKG 387          
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Match: A0A4S4L419_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L419_9AGAM)

HSP 1 Score: 53.9 bits (128), Expect = 2.090e-6
Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 1
Query:   19 DSGASTHMTPFADCMINYRECN-LTLRIADGSTRAIEGYGDVSVVFRSGNGPVQVLLTNVAHVPDLRYHLFSLPTLVKNGH 258
            DSGAS H+TP  D ++N R C+ +++R A+GST      G++++V  +GN    + L NV + P +   L S+  L  +G+
Sbjct:  570 DSGASLHLTPEKDRLLNIRSCDPVSIRAANGSTFQANLEGELNLVIPNGNNRSVIPLRNVKYAPAMHSTLISISKLDADGY 650          
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Match: A0A4S4LGK9_9AGAM (Uncharacterized protein n=4 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LGK9_9AGAM)

HSP 1 Score: 52.4 bits (124), Expect = 7.220e-6
Identity = 28/81 (34.57%), Postives = 48/81 (59.26%), Query Frame = 1
Query:   19 DSGASTHMTPFADCMINYRECN-LTLRIADGSTRAIEGYGDVSVVFRSGNGPVQVLLTNVAHVPDLRYHLFSLPTLVKNGH 258
            DSGAS H+TP  + ++N R C+ +++R A+GST      G++++V  +GN    + L NV + P +   L S+  L  +G+
Sbjct:  417 DSGASLHLTPEKERLLNIRSCDPVSIRAANGSTFQANLEGELNLVIPNGNNRSVIPLRNVKYAPAMHSTLISISKLDADGY 497          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84792.19757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
UPI001D04A61F8.650e-842.86uncharacterized protein n=1 Tax=Morchella sextelat... [more]
UPI001D0484743.220e-740.48uncharacterized protein n=1 Tax=Morchella sextelat... [more]
UPI001D03BA434.280e-741.67uncharacterized protein n=3 Tax=Morchella sextelat... [more]
A0A0D7BDN6_9AGAR4.320e-742.50Uncharacterized protein n=1 Tax=Cylindrobasidium t... [more]
A0A2G3AQ37_CAPCH5.670e-736.14Uncharacterized protein n=1 Tax=Capsicum chinense ... [more]
A0A4S4KAZ0_9AGAM1.480e-635.80Uncharacterized protein n=1 Tax=Phellinidium pouza... [more]
UPI001D03F3042.010e-640.48uncharacterized protein n=2 Tax=Morchella sextelat... [more]
UPI001D037AE52.080e-640.48uncharacterized protein n=22 Tax=Morchella sextela... [more]
A0A4S4L419_9AGAM2.090e-635.80Integrase catalytic domain-containing protein n=1 ... [more]
A0A4S4LGK9_9AGAM7.220e-634.57Uncharacterized protein n=4 Tax=Phellinidium pouza... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84792contigM-pyrifera_M_contig84792:382..642 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score63.5
Seed ortholog evalue5.4e-08
Seed eggNOG ortholog7029.ACYPI089092-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,3BGB6@33208,3D5G4@33213,41ZUZ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
Exons1
Model size261
Cds size261
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816754.858632-CDS-M-pyrifera_M_contig84792:381..6421622816754.858632-CDS-M-pyrifera_M_contig84792:381..642Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84792 382..642 -
1692278158.8251638-CDS-M-pyrifera_M_contig84792:381..6421692278158.8251638-CDS-M-pyrifera_M_contig84792:381..642Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84792 382..642 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84792.19757.1prot_M-pyrifera_M_contig84792.19757.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84792 382..642 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84792.19757.1

>prot_M-pyrifera_M_contig84792.19757.1 ID=prot_M-pyrifera_M_contig84792.19757.1|Name=mRNA_M-pyrifera_M_contig84792.19757.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
DEAWICDSGASTHMTPFADCMINYRECNLTLRIADGSTRAIEGYGDVSVV
FRSGNGPVQVLLTNVAHVPDLRYHLFSLPTLVKNGHT
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mRNA from alignment at M-pyrifera_M_contig84792:382..642-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84792.19757.1 ID=mRNA_M-pyrifera_M_contig84792.19757.1|Name=mRNA_M-pyrifera_M_contig84792.19757.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=261bp|location=Sequence derived from alignment at M-pyrifera_M_contig84792:382..642- (Macrocystis pyrifera P11B4 male)
GACGAGGCTTGGATATGTGATAGTGGTGCGTCTACTCACATGACGCCCTT CGCTGACTGCATGATCAATTATAGAGAATGCAACTTGACTCTCCGAATCG CTGACGGATCCACCCGAGCGATCGAAGGTTACGGTGACGTGAGTGTTGTC TTTCGGTCCGGAAACGGTCCCGTGCAAGTGCTGCTTACGAACGTTGCGCA CGTGCCGGATCTCCGCTACCACTTATTTTCCCTGCCCACTCTGGTCAAAA ACGGCCATACT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84792:382..642-

>mRNA_M-pyrifera_M_contig84792.19757.1 ID=mRNA_M-pyrifera_M_contig84792.19757.1|Name=mRNA_M-pyrifera_M_contig84792.19757.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig84792:382..642- (Macrocystis pyrifera P11B4 male)
GACGAGGCTTGGATATGTGATAGTGGTGCGTCTACTCACATGACGCCCTT
CGCTGACTGCATGATCAATTATAGAGAATGCAACTTGACTCTCCGAATCG
CTGACGGATCCACCCGAGCGATCGAAGGTTACGGTGACGTGAGTGTTGTC
TTTCGGTCCGGAAACGGTCCCGTGCAAGTGCTGCTTACGAACGTTGCGCA
CGTGCCGGATCTCCGCTACCACTTATTTTCCCTGCCCACTCTGGTCAAAA
ACGGCCATACTGACGAGGCTTGGATATGTGATAGTGGTGCGTCTACTCAC
ATGACGCCCTTCGCTGACTGCATGATCAATTATAGAGAATGCAACTTGAC
TCTCCGAATCGCTGACGGATCCACCCGAGCGATCGAAGGTTACGGTGACG
TGAGTGTTGTCTTTCGGTCCGGAAACGGTCCCGTGCAAGTGCTGCTTACG
AACGTTGCGCACGTGCCGGATCTCCGCTACCACTTATTTTCCCTGCCCAC
TCTGGTCAAAAACGGCCATACT
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