mRNA_M-pyrifera_M_contig8445.19692.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8445.19692.1
Unique NamemRNA_M-pyrifera_M_contig8445.19692.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 3.840e-140
Identity = 198/220 (90.00%), Postives = 209/220 (95.00%), Query Frame = 2 
Query:  134 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTVGSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCARELARILRDSGNKV 793
            VLDEADRMLDMGFEPQIR IVSQIRPDRQTLMWSATWPKEV+GLA+DFLRNYYQVTVGSLELSANKDI+QVIEIVEDFGKY  L +HLQEHNN GRVLIFVETKKGCDALTRSLRHEGWPALSIHGDK+Q ERDRVLHDFK+GR+LILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFA KN++CAREL RIL+ +  KV
Sbjct:  175 VLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQVTVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKV 394
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BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 345 bits (886), Expect = 1.960e-114
Identity = 165/220 (75.00%), Postives = 192/220 (87.27%), Query Frame = 2 
Query:  134 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTVGSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCARELARILRDSGNKV 793
            VLDEADRMLDMGFEPQIRKIV QIRPDRQTLMWSATWPKEVQ LA+DFL NYYQVTVGSL+LSANKDIRQ +E++ED+ KYS L ++L+EHN+ GRVLIFVETKKG D L RSLR +GWPA +IHGDK+QDERD  L +F++GR  +LVATDVA+RG+DVKDIRMVINFDFP  +E Y+HRIGR  RAG KGT+++FF  KNARCAR+LA+IL +SGN V
Sbjct:  213 VLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMWSATWPKEVQALARDFLTNYYQVTVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDV 432
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BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 1.380e-113
Identity = 166/220 (75.45%), Postives = 188/220 (85.45%), Query Frame = 2 
Query:  134 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTVGSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCARELARILRDSGNKV 793
            VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQ LA+DFL +YYQVTVGSLEL+ANKDI+Q+IE  EDF KY  L++HLQ+H + G+VL+FVETKKGCDALTRSLR +G+ A  IHGDK+Q+ERD VL DFK G   +LVATDVAARGLDVKDI+MVINFDFP  ME Y+HRIGRCGRAG KG A+SFF  KN+R  REL +IL +S N V
Sbjct:  278 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHV 497
[Close]
BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 334 bits (856), Expect = 3.050e-109
Identity = 166/220 (75.45%), Postives = 185/220 (84.09%), Query Frame = 2 
Query:  134 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTVGSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCARELARILRDSGNKV 793
            VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLA+DFL NYYQVTVGSLELSANKD+ Q+IE +EDFGKY  L  HL+E     + LIFVETKKGCDALTRSLR +G+ A  IHGDK+QDERD VL +F++ +  +LVATDVAARGLDVK+I  V+NFDFP  ME YVHRIGRCGRAG KGTAISFFA KNA+ AREL  IL  +G+ V
Sbjct:  262 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHV 481
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BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 324 bits (831), Expect = 1.740e-105
Identity = 159/220 (72.27%), Postives = 181/220 (82.27%), Query Frame = 2 
Query:  134 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTVGSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCARELARILRDSGNKV 793
            VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLA+DFL NYYQVTVGSLEL AN DI QVIEI ED+GKY+ L    +      + L+FVETK+GCDALTRSLR +G+ A  IHGDK+Q ERD VL +F++    ILVATDVAARGLD++DI MV+NFDFP  ME YVHRIGRCGRAG KGTA+SFF  KNA+  REL RI+R++G+ V
Sbjct:  257 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQVTVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRGGP-KALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAV 475
[Close]
BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Match: A0A7S2BHU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHU1_9STRA)

HSP 1 Score: 322 bits (825), Expect = 9.250e-105
Identity = 151/220 (68.64%), Postives = 185/220 (84.09%), Query Frame = 2 
Query:  134 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTVGSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCARELARILRDSGNKV 793
            VLDEADRMLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEV+G+A+DFL N+YQVTVGSLEL+ANK I Q++E+V+D  KY      ++EH    RV++FVETK+G D LTRS+R EG+PA +IHGDK+QDERDR L DF+DGR +IL+ATDVAARGLDVK+++MV+NFD P   E YVHRIGRCGRAG  GT++S+F  KNAR  R+L ++LRD+G +V
Sbjct:  243 VLDEADRMLDMGFEPQMRKIVSQIRPDRQTLMWSATWPKEVEGMARDFLTNFYQVTVGSLELAANKSITQMVEVVDDNDKYRRCIGFMREHFKGERVIVFVETKRGADQLTRSIRQEGYPANAIHGDKTQDERDRTLQDFRDGRIMILIATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAGATGTSMSYFTRKNARMGRDLVKLLRDAGQEV 462
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BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Match: A0A4D9CVW6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVW6_9STRA)

HSP 1 Score: 311 bits (798), Expect = 1.940e-102
Identity = 151/220 (68.64%), Postives = 183/220 (83.18%), Query Frame = 2 
Query:  134 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTVGSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCARELARILRDSGNKV 793
            VLDEADRMLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEVQ LA+DFL++ YQVTVGSL+L+ANKDI+Q + + ED  KY  L R L+E+N  G+VL+FVETK+GCD L RSL+ +G+ A++IHGDKSQ +RD  L  FK+GR+ ILVATDVAARGLDVKDI+MV NFDFP  ME Y+HR+GR GRAG KG A+SF   K+ R +REL++IL +SGN+V
Sbjct:  122 VLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHGRISRELSKILEESGNQV 341
[Close]
BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Match: W7U315_9STRA (Dead-box atp-dependent rna helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U315_9STRA)

HSP 1 Score: 314 bits (805), Expect = 9.280e-102
Identity = 153/220 (69.55%), Postives = 184/220 (83.64%), Query Frame = 2 
Query:  134 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTVGSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCARELARILRDSGNKV 793
            VLDEADRMLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEVQ LA+DFL++ YQVTVGSL+L+ANKDI+Q + + ED  KY  L R L+E+N  G+VL+FVETK+GCD L RSL+ +G+ A++IHGDKSQ +RD  L  FK+GR+ ILVATDVAARGLDVKDI+MV NFDFP  ME Y+HR+GR GRAG KG A+SF   K+AR +RELA+IL +SGN+V
Sbjct:  252 VLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHARISRELAKILEESGNQV 471
[Close]
BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Match: A0A7S2W2X9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2X9_9STRA)

HSP 1 Score: 311 bits (798), Expect = 1.020e-100
Identity = 151/220 (68.64%), Postives = 181/220 (82.27%), Query Frame = 2 
Query:  134 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTVGSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCARELARILRDSGNKV 793
            V+DEADRMLDMGFEPQIRKIV QIRPDRQTLMWSATWPKEV+GLA+DFL NYYQVTVGSLEL+ANK IRQ++E+V+D  KY   +  L+      RV+IFVETK+G D LTRSLR +G+PA +IHGDK+QDERDRVL +F+ GR  +LVATDVAARGLDVK+++MV+NFD P   E YVHRIGRCGRAG  G ++S+F  K A+  REL RILR++G +V
Sbjct:  245 VMDEADRMLDMGFEPQIRKIVQQIRPDRQTLMWSATWPKEVEGLARDFLTNYYQVTVGSLELTANKAIRQLVEVVDDHDKYRRCSDFLRREFKGERVIIFVETKRGADQLTRSLRMDGYPASAIHGDKTQDERDRVLAEFRQGRCNMLVATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAGATGVSMSYFTRKAAKMGRELIRILREAGQEV 464
[Close]
BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Match: A0A6S7MVI8_LACSI (Uncharacterized protein n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7MVI8_LACSI)

HSP 1 Score: 305 bits (782), Expect = 6.550e-99
Identity = 151/220 (68.64%), Postives = 177/220 (80.45%), Query Frame = 2 
Query:  134 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTVGSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCARELARILRDSGNKV 793
            VLDEADRMLDMGFEPQIRKI++QIRPDRQTL WSATWPKEV+ LA+ FLRN Y+V +GS  L AN+ I QVIE+V D  KYS L   L+E  +  R+LIFVETKKGCD +TR LR +GWPALSIHGDKSQ ERD VL +FK GR+LI+ ATDVAARGLDVKDI+ VIN+DFP  +E YVHRIGR GRAG KG A++FF   NA+ AREL +IL+++G  V
Sbjct:  170 VLDEADRMLDMGFEPQIRKIIAQIRPDRQTLYWSATWPKEVESLARQFLRNPYKVIIGSPVLKANQAINQVIEVVTDMEKYSRLIGVLKEMMDGSRILIFVETKKGCDQVTRQLRMDGWPALSIHGDKSQSERDWVLAEFKSGRSLIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGIAVTFFTHSNAKHARELVKILQEAGQAV 389
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8445.19692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBB2_9PHAE3.840e-14090.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZEN1_9STRA1.960e-11475.00DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
D7FGZ5_ECTSI1.380e-11375.45DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S2XX29_9STRA3.050e-10975.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9KNI1_HETAK1.740e-10572.27Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2BHU1_9STRA9.250e-10568.64Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4D9CVW6_9STRA1.940e-10268.64Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U315_9STRA9.280e-10269.55Dead-box atp-dependent rna helicase n=1 Tax=Nannoc... [more]
A0A7S2W2X9_9STRA1.020e-10068.64Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6S7MVI8_LACSI6.550e-9968.64Uncharacterized protein n=1 Tax=Lactuca saligna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8445contigM-pyrifera_M_contig8445:291..5282 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.9
Seed ortholog evalue3.1e-108
Seed eggNOG ortholog2880.D8LRW1
Preferred nameDBP2
KEGG koko:K12823
KEGG Pathwayko03040,ko05202,ko05205,map03040,map05202,map05205
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000184,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008026,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042254,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043633,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0051179,GO:0060255,GO:0060293,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0071042,GO:0071047,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990120,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03041
Exons5
Model size829
Cds size675
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8445.19692.1prot_M-pyrifera_M_contig8445.19692.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8445 291..5128 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816751.9633589-CDS-M-pyrifera_M_contig8445:290..4581622816751.9633589-CDS-M-pyrifera_M_contig8445:290..458Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8445 291..458 -
1692278157.2260077-CDS-M-pyrifera_M_contig8445:290..4581692278157.2260077-CDS-M-pyrifera_M_contig8445:290..458Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8445 291..458 -
1622816751.9747674-CDS-M-pyrifera_M_contig8445:1289..14271622816751.9747674-CDS-M-pyrifera_M_contig8445:1289..1427Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8445 1290..1427 -
1692278157.2375228-CDS-M-pyrifera_M_contig8445:1289..14271692278157.2375228-CDS-M-pyrifera_M_contig8445:1289..1427Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8445 1290..1427 -
1622816751.9916136-CDS-M-pyrifera_M_contig8445:2295..24181622816751.9916136-CDS-M-pyrifera_M_contig8445:2295..2418Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8445 2296..2418 -
1692278157.2463849-CDS-M-pyrifera_M_contig8445:2295..24181692278157.2463849-CDS-M-pyrifera_M_contig8445:2295..2418Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8445 2296..2418 -
1622816752.0077589-CDS-M-pyrifera_M_contig8445:4400..45051622816752.0077589-CDS-M-pyrifera_M_contig8445:4400..4505Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8445 4401..4505 -
1692278157.2550945-CDS-M-pyrifera_M_contig8445:4400..45051692278157.2550945-CDS-M-pyrifera_M_contig8445:4400..4505Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8445 4401..4505 -
1622816752.025638-CDS-M-pyrifera_M_contig8445:4987..51281622816752.025638-CDS-M-pyrifera_M_contig8445:4987..5128Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8445 4988..5128 -
1692278157.2708986-CDS-M-pyrifera_M_contig8445:4987..51281692278157.2708986-CDS-M-pyrifera_M_contig8445:4987..5128Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8445 4988..5128 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816752.03964-UTR-M-pyrifera_M_contig8445:5128..52821622816752.03964-UTR-M-pyrifera_M_contig8445:5128..5282Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8445 5129..5282 -
1692278157.2796285-UTR-M-pyrifera_M_contig8445:5128..52821692278157.2796285-UTR-M-pyrifera_M_contig8445:5128..5282Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8445 5129..5282 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8445.19692.1

>prot_M-pyrifera_M_contig8445.19692.1 ID=prot_M-pyrifera_M_contig8445.19692.1|Name=mRNA_M-pyrifera_M_contig8445.19692.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=225bp
MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLAKDFLRNYYQVTV
GSLELSANKDIRQVIEIVEDFGKYSCLNRHLQEHNNTGRVLIFVETKKGC
DALTRSLRHEGWPALSIHGDKSQDERDRVLHDFKDGRTLILVATDVAARG
LDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNARCAR
ELARILRDSGNKVTGPNAKEPSKC*
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mRNA from alignment at M-pyrifera_M_contig8445:291..5282-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8445.19692.1 ID=mRNA_M-pyrifera_M_contig8445.19692.1|Name=mRNA_M-pyrifera_M_contig8445.19692.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4992bp|location=Sequence derived from alignment at M-pyrifera_M_contig8445:291..5282- (Macrocystis pyrifera P11B4 male)
AAAATTCGATAAAAATGGAATATAGACGAGACCTACGTATTACGCAGCTT
GCAAAGTTGAGCATCAACTATTTAATCAGTCGAACTCACAGCTGGCGTAT
TTCAAACTTTTGTAAAAACTATACAAAAACAAGGTGCTAGATGAAGCCGA
CCGGATGTTGGACATGGGCTTCGAGCCCCAGATCCGCAAGATTGTCAGCC
AGATCCGACCGGATAGGCAGACGCTCATGTGGAGCGCCACCTGGCCCAAG
GAGGTACAGGGGCTTGCGAAGGACTTTCTCCGCAATTATTACCAGGTGAG
AAGACCGACAACCTGCTAGGTAGGCCATTGCTGGAAGGGAGTCGAGGTGA
CAACGCCGGGCGTGCCGTGGCCGCAGGGTGCTCTGGTGGCAGGGCGTTCC
CCTCGGGGATGGTGGCGTTTGTTTTCGGCGGGGCGGGGTGGGGCGAGGGT
TTGGCGGGGGCGGGTGTGTAGGTGGGGGTTGGAGGGGGCGTTCACGTTGA
TGCCACGCGACGCTGTCTTCGATCCGCCGCGCTTTATAGCCTGCGCCATG
CCGAGGCAGCGGAGCGGGGCTAAAACATGATACCTGATACCAGGTACGTA
CGATAGGTCTAAGTGACGCTCTCGCTGTAGACTTTATGACGTCTTTTCGT
TGTTGTGTCCGTAATTCCTTTACCGCTCGATTATTTTTTGAGTGACTTAC
ACTCCTCCTTCAATCGACCAAACCAGTCCCCCCCGCCCCCCTCCTCCCTC
AAACACAAACTTGTCGCCTTCAAAAAGGTGACGGTAGGTTCGCTGGAACT
TTCGGCCAACAAGGACATCCGCCAGGTCATTGAGATTGTTGAGGACTTCG
GGAAATACAGCTGCCTCAACCGGCACCTGCAGGTACTCCCGAAGAACAAA
ATCTCCGGAACTACCCCAGTATTTCCGCGACCTAGACAGGGGGGAGCATG
CCGTAAAAACCAAGTGCCTTTTTCAACAGTTGTATGTGTTCCTACAATTC
GTACAGATTGCACGCCCCTGTGGTTTGCTTTTTAATTCCGACCTTTTAGG
AGTGTGGATGTTGTGTTGTCTTTTTTTCGCGTACTCCTCATCTGTTTTTT
TCTAGTTTTGTTATTATCACGGCGCGACCGTCTCCTAACGAATGACAAGG
AGAGCGTTGCGGCAGAACAGGGAGGTAAAGTTGCAGTGCGCGGCAGCACC
TATGAAATGGGAATTTGGAAATAGGCAGGGATTGGTAATTGTCGTGACTT
CGTGCGTGAAATGTTACAAGAAAAATATGTTTTCAACCGGAACGTTGGTT
GGTTGGTTGGTTGGTTGGTCGTTGTCGTTGTTGTTTTTATCGCGGCGCGA
CCGCTGCCGTATCAACGAAAGCGCTGCGGCAAAACAGGTTATAGTTTACA
TACAGTATATACGCGAGAGCGCTTGATCCCCTTGGGAATCCAGGGAGGAA
AAGTACACACCTCGGACAGATAGATGATGGTCTATCTATTAATATCCACA
GATAATGTACAGTTCATCTAGTTCCTCACCTGCCGTTGGGAGAGGTTGTG
CAGGATGTGAAAAGTACGGATCCGACCCAGGAAACATGTCCCGGATCGTG
CAGACTCTGTATGGGTGCCATCCGGAATCAATAGCTATATATATATCATA
CACACCAAGGAATCTACCTCCCCTAGATACACCTAGATAATCGAAAGTGG
GGATCGATGACCTGTCCGAGTGTCGAAACGTAATATTACGACTACAGGAC
GAAACATGGTTTATGTTTTTGTTGTTCCTTATCCCATCACGATGGTCAGA
AAATCTTTAATTTTTGTGTATCATGGTCCATCCATACCATCACAACAGTC
AGCGAACATCGTTCACTTTGTATCATGGTCCATCCATCCCATCATAATAG
TCATCATCGTTCACTTTGTATCACGGTCCATCCGTCCCATCACAATAGTC
AGCCATGCGAAGCACCCCGGGTTGCCGGAATACAGGGGTATCATAGATGG
GAGTGCCCGATCGTCAAGGCAAGGAGTTGCTATGTATAGTTTTTACATGA
ATTGTACATGGCGGGGCGAGGTAGAGCAGCACTCCCTGCTCCGTTCAAGA
AGACCGAAAGGCACAGGATAGGCAACCGTCAACGCTCTTTTTCTTTCAGA
TAAGGAGGTAAAACAGAAAAAAAAAACGAATAAGCAGAGGAGCGAACACC
CCGAATTGGTACGTCCCGGCCTCCACGACGCCCGACAGCAAGTAGGACCA
AACGCGAGCGCCGATAGTGGCGTGAAGAGAAACCGTTACTCGGGCGCGAA
ATATTACGGTCGTCAGCGGTGCTGCGCTAGGTCTAATCGGTTTGGGATCA
GGTATCGTGAACATGGAGGTTGGCGGCCGGCTCTCGGCCGCCACGTCCCA
ACCGCCACGAGCAGTGGTGCGTGCAGCGTCCTCGGCGTCGATACACACGG
AACCAAGCATGTTTTTGTTTGCACAAAAAGGCACTATTTTCTTAAAGTAG
TAGTACGTACGTCCCGAAAAAAATGGGGGTGCTATTCTGATGGGGTTCAC
ATTCCGGATACAGTAGTGGTTCCTCTGCAGTGCCGGTTGAGTAGTGCTGG
ATGCCCGCTATAGATAGTGTCGGTGGAATTGCTTGGCGCGGATGGGATTA
CCTTGTGTGCCAGTGTGCGGAGTAATTAGTGCCGGTTGGTTGCCGCTATA
TATGGTGCCGGTGTTGTTGCCTGGCGCACACATACCGGCACTATGGAGGG
ACCACTGCTGTACGTACATATTTACGTGCAGCGATGCCTTTCTTCCCCTG
CGTTGGCACCGATTCTGATGTCACGGGTGGCACGGCTTTGATTTTTCGCA
CATACGATCGGCAGGAGCACAACAACACCGGCAGGGTCCTTATTTTTGTG
GAGACGAAGAAGGGCTGCGACGCTCTGACGCGCTCCCTCCGGCATGAGGG
GTGGCCGGCTCTGTCCATCCACGGCGACAAGAGTCAGGTAAGGAGGGTCA
TGCCAGTCCCCACGTGGTTGCCTTCGACCGGGTGGATGGTGTCGGAGACA
GTCAGAGTAAATTAGTTGGTGGTGTTGTTGTTTGTTTGTTGCTGTTGCTG
TTGTTGGTGGCGGTGGTGTTAGTAGTGGTGGTGGTGTTGGGTGGTGGTGT
TGGGTGGTGGTGTCAGTGTTGGCGTTGGTTGGTGTTGGTGGTTGTTGTTA
TTTGTTGTTGGTGTTGGTGGTTGTTGTTGGTGTTGGTGTCGATGTTTGTT
GTTGTCGTTGCTGTTGGTGGTGGCACCGTCGTTGTTGTTGTATGTTTTGA
GACAGTTCGTGAAGTAAATTTGCAACCCCTTCCAACGGGGGTCCGAAGAC
CTCATCGACGCGAGGTGTAGGGAATTGGCGAAGGCCTCTGATGGAATCGG
ATGTCTTGCTACTCACCGTCATCCAAGCGTTGCCACAACCTTTCGGGATA
CATCTTCCGGCGAGAGATGGAGGTCTAAATATACGCCGTGACGATGCCAG
TCATGGCACCCCCCTAGACACGATTTTGAAGGGTCGATTGCTCCACAAGC
GGTAGGGTGGCAATGCAGAAGAAGAGGGCGATTTGGAAATATCTCGTTGA
GAGCTTTCCTTTGTAGGATTTGGTCGGTTTTCGCAGCCTCTTGGTTGTGG
AGCAATCGACCTTTCAAAATCGGTCTATAGGGTGCGATCAATGACACTTT
TCATTCCTATGGTATTTCTGCGAATTGGACAATCCCGCTGATCTGCAGGC
CGTTTGCATGTCGTTTGGTGTGCAATAGGACGAGCTACGACTTGGTTAAT
CTCGCTGGTATGGGTGCTCGTTTTGCATGTTGCGTGATGTTACATAATGT
CATAGGACGAGCGCGACCGCGTGCTGCACGACTTCAAGGACGGGCGGACG
CTGATCCTCGTCGCAACGGACGTCGCGGCCCGCGGCCTGGACGTGAAAGA
CATCCGTATGGTCATCAACTTCGACTTCCCAAAGGAGATGGAGGTGAGCC
GGCCAGCAAGCGCGCGTGCACTCAGTGGGTGGCTGCTGTGTGATCGTCCA
AGCCCATCCAACCGTCCCTGTTGCTGCTTGAAGTTTAACGTGCAGCTGAC
GTAATCATAGTACTGTTTTTTATATATGCGGGGCTTGTCTCTGCGCCGCC
ATTTTTTGGTGTTTTGGTGTTGCCGCCCATGAACGGTGCAAGTGTTATTG
TGGACCTTGATGTGGCGGTGGTGTCAAAAGAAGAACCGCACGGACGCAAT
AAGAAGTGCCACTTGAAGCAACAACATTAAACAATCGGTCGTGCCGTATC
TGCACTTCCGTATGATTTACCTGGTGTGTGGTTCACTTACTAAAACGTCA
ATGACCAGTCGATGTTACTTTCGCGCTCAATTTCTACACTAATGAACACA
GCAATGGTCAGTCGATGTTTTTCATGTGCTTAACTCACGAACACCGCAAT
CGTCAGTGGATGATTTTGATGCCCCTTTCGATGGCCACCACGATTCTTCT
GTCCTTGTATTTTATTCGAGCAAGTACGTACCAACCGAGAGACAAATTAC
GTTTGCACATGTTTGAGCCACGTACGAAAACGCAATTGGGAGACGTATTA
CCTTCTCCTTACTAGTAGATAACAATAATATTATTCGAATCTGGTTGATA
GAATTTGCCGTGTTTTGAAGTATTAATAGTTGGATTCTACAGTAGTTTCT
CTTTCATATTAAACGGGAAGGGGGAAAAAATGTATGGATGGTATGATTGG
AACAATACATTTTGTCGGATAGCAAATGGACTAATAGCGTTTTTTAATAC
CATCCTCCTTGGTCGAGCGAACAGTCCTATGTCCACCGCATCGGACGGTG
CGGGCGCGCGGGGCACAAGGGAACCGCGATCAGTTTCTTCGCAGGAAAGA
ACGCAAGGTGTGCGAGGGAGCTCGCCAGGATCCTCAGGGACTCTGGCAAC
AAGGTGACTGGGCCGAACGCGAAAGAACCCTCCAAATGCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8445:291..5282-

>mRNA_M-pyrifera_M_contig8445.19692.1 ID=mRNA_M-pyrifera_M_contig8445.19692.1|Name=mRNA_M-pyrifera_M_contig8445.19692.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1350bp|location=Sequence derived from alignment at M-pyrifera_M_contig8445:291..5282- (Macrocystis pyrifera P11B4 male)
ATGTTGGACATGGGCTTCGAGCCCCAGATCCGCAAGATTGTCAGCCAGAT
CCGACCGGATAGGCAGACGCTCATGTGGAGCGCCACCTGGCCCAAGGAGG
TACAGGGGCTTGCGAAGGACTTTCTCCGCAATTATTACCAGATGTTGGAC
ATGGGCTTCGAGCCCCAGATCCGCAAGATTGTCAGCCAGATCCGACCGGA
TAGGCAGACGCTCATGTGGAGCGCCACCTGGCCCAAGGAGGTACAGGGGC
TTGCGAAGGACTTTCTCCGCAATTATTACCAGGTGACGGTAGGTTCGCTG
GAACTTTCGGCCAACAAGGACATCCGCCAGGTCATTGAGATTGTTGAGGA
CTTCGGGAAATACAGCTGCCTCAACCGGCACCTGCAGGTGACGGTAGGTT
CGCTGGAACTTTCGGCCAACAAGGACATCCGCCAGGTCATTGAGATTGTT
GAGGACTTCGGGAAATACAGCTGCCTCAACCGGCACCTGCAGGAGCACAA
CAACACCGGCAGGGTCCTTATTTTTGTGGAGACGAAGAAGGGCTGCGACG
CTCTGACGCGCTCCCTCCGGCATGAGGGGTGGCCGGCTCTGTCCATCCAC
GGCGACAAGAGTCAGGAGCACAACAACACCGGCAGGGTCCTTATTTTTGT
GGAGACGAAGAAGGGCTGCGACGCTCTGACGCGCTCCCTCCGGCATGAGG
GGTGGCCGGCTCTGTCCATCCACGGCGACAAGAGTCAGGACGAGCGCGAC
CGCGTGCTGCACGACTTCAAGGACGGGCGGACGCTGATCCTCGTCGCAAC
GGACGTCGCGGCCCGCGGCCTGGACGTGAAAGACATCCGTATGGTCATCA
ACTTCGACTTCCCAAAGGAGATGGAGGACGAGCGCGACCGCGTGCTGCAC
GACTTCAAGGACGGGCGGACGCTGATCCTCGTCGCAACGGACGTCGCGGC
CCGCGGCCTGGACGTGAAAGACATCCGTATGGTCATCAACTTCGACTTCC
CAAAGGAGATGGAGTCCTATGTCCACCGCATCGGACGGTGCGGGCGCGCG
GGGCACAAGGGAACCGCGATCAGTTTCTTCGCAGGAAAGAACGCAAGGTG
TGCGAGGGAGCTCGCCAGGATCCTCAGGGACTCTGGCAACAAGGTGACTG
GGCCGAACGCGAAAGAACCCTCCAAATGCTAGTCCTATGTCCACCGCATC
GGACGGTGCGGGCGCGCGGGGCACAAGGGAACCGCGATCAGTTTCTTCGC
AGGAAAGAACGCAAGGTGTGCGAGGGAGCTCGCCAGGATCCTCAGGGACT
CTGGCAACAAGGTGACTGGGCCGAACGCGAAAGAACCCTCCAAATGCTAG
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