mRNA_M-pyrifera_M_contig84423.19686.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84423.19686.1
Unique NamemRNA_M-pyrifera_M_contig84423.19686.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Match: A0A1A9R3E4_9GAMM (Alpha-E domain-containing protein n=55 Tax=root TaxID=1 RepID=A0A1A9R3E4_9GAMM)

HSP 1 Score: 561 bits (1447), Expect = 3.420e-201
Identity = 285/292 (97.60%), Postives = 286/292 (97.95%), Query Frame = 1 
Query:    1 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARHTDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 876
            SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLP RLPLGWAPLIEMTGSLEAF ARH DF+ERNVVHFLCAD DND SIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHEL LLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI
Sbjct:    3 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPARLPLGWAPLIEMTGSLEAFTARHEDFDERNVVHFLCADPDNDISIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELTLLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Match: A0A354XJZ7_HALSX (Alpha-E domain-containing protein n=6 Tax=Halomonas TaxID=2745 RepID=A0A354XJZ7_HALSX)

HSP 1 Score: 530 bits (1364), Expect = 1.300e-188
Identity = 266/292 (91.10%), Postives = 279/292 (95.55%), Query Frame = 1 
Query:    1 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARHTDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 876
            SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLP  LPLGWAPLIEMTG+LE FN RH+ F+ERNVVHFLCAD  N +SI+SALASARENLRTTRDVVPREIWEEVNQLYL+VADHAE+GVSPRRRD+FLK+VIRGCQ LTGLIEGTLSHGPARTFI+LGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDP+LPRSIACSLETLG EL LLPRQDR AATVSLVRADVVDADIQALAHSPSKLH F+D+LQI
Sbjct:    3 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPRHLPLGWAPLIEMTGTLETFNERHSSFDERNVVHFLCADAQNGSSILSALASARENLRTTRDVVPREIWEEVNQLYLNVADHAESGVSPRRRDAFLKNVIRGCQTLTGLIEGTLSHGPARTFIKLGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPHLPRSIACSLETLGQELQLLPRQDRVAATVSLVRADVVDADIQALAHSPSKLHAFVDDLQI 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Match: UPI001D0A7568 (alpha-E domain-containing protein n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0A7568)

HSP 1 Score: 508 bits (1309), Expect = 3.340e-180
Identity = 254/292 (86.99%), Postives = 271/292 (92.81%), Query Frame = 1 
Query:    1 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARHTDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 876
            SRVAENLYWMARY+ERAEDTARLLSVNSHLMLDLP  LPLGWAPLIEMTG+L AF  R   F+E++VVHFLCADT N +SI+SALASARENLRTTRDVVPREIWEEVN LYL VADHAE+GVSPRRRD+FLK+VIR CQ LTGLIEGTLSHGP RTFIELGRQLERADMTTRI+DVRSASLLP+NPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDP+LPR+IACSLETL HEL  LPRQDR  ATV+LVRADV+DADIQALAHSPSKLH FIDELQ+
Sbjct:    3 SRVAENLYWMARYVERAEDTARLLSVNSHLMLDLPRNLPLGWAPLIEMTGTLAAFRERFDTFDEQSVVHFLCADTQNSSSILSALASARENLRTTRDVVPREIWEEVNHLYLGVADHAEHGVSPRRRDAFLKNVIRSCQTLTGLIEGTLSHGPTRTFIELGRQLERADMTTRILDVRSASLLPKNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPHLPRAIACSLETLAHELQWLPRQDRVVATVALVRADVIDADIQALAHSPSKLHAFIDELQV 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Match: A0A6M4FIV4_9GAMM (Alpha-E domain-containing protein n=1 Tax=Halomonas sp. PA5 TaxID=2730357 RepID=A0A6M4FIV4_9GAMM)

HSP 1 Score: 429 bits (1102), Expect = 9.660e-149
Identity = 211/292 (72.26%), Postives = 252/292 (86.30%), Query Frame = 1 
Query:    1 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARHTDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 876
            SRVAENLYWMARYIERAEDTARL+SV+SHL+LDLP  + LGW+ LI++TGS E ++  HT  +ERNV+HFLCA+     SI+SAL +ARENLRTTRDVVPREIWE++NQLY+++++ AE+G+ PRRRD+FLK+VIRGCQ LTGLIEGT+SH  ARTFIE+GR LERADMTTRI+DVRSA+LLP+NP++LLPFENLQWMSVLKSLTAYQMYRQ VR+RVRGPDVLRFLLQD  LPRS++  L+ L  EL  LP  DR  AT +LVRA+V +ADIQALA+SP +LH FIDELQI
Sbjct:    3 SRVAENLYWMARYIERAEDTARLISVSSHLLLDLPREVSLGWSTLIDITGSAEIYDGLHTTRDERNVLHFLCAERSYGGSILSALGNARENLRTTRDVVPREIWEQINQLYMTISEQAESGLKPRRRDAFLKNVIRGCQTLTGLIEGTMSHDLARTFIEMGRHLERADMTTRILDVRSANLLPKNPDDLLPFENLQWMSVLKSLTAYQMYRQNVRVRVRGPDVLRFLLQDRYLPRSVSRGLQELAWELETLPHHDRALATATLVRAEVAEADIQALANSPDELHRFIDELQI 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Match: A0A139CDY3_9GAMM (Alpha-E domain-containing protein n=4 Tax=Halomonadaceae TaxID=28256 RepID=A0A139CDY3_9GAMM)

HSP 1 Score: 426 bits (1095), Expect = 1.040e-147
Identity = 213/292 (72.95%), Postives = 245/292 (83.90%), Query Frame = 1 
Query:    1 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARHTDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 876
            SRVAENLYWMARYIERAEDTARL+SVNSHL+LDLP +  LGW+ LI++TGS E F   H    E+NVVHFLC + +N  SI+S+LA ARENLRTTRDVV REIWE++N++YL V D AE+G++PRRRD FLK +IRGCQ LTGLIEGTLSH  ARTFIE+GR LERADMTTRI+DVRS +LLP++PEEL PFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQD + PR++A SLE L  EL  LPR DR  A  +LVRAD ++AD+QALA SP +LH FIDELQI
Sbjct:    3 SRVAENLYWMARYIERAEDTARLVSVNSHLLLDLPHQTALGWSTLIDITGSDETFATLHDRRNEKNVVHFLCVERENPGSILSSLAGARENLRTTRDVVSREIWEQINEMYLEVRDQAEHGLAPRRRDGFLKRLIRGCQTLTGLIEGTLSHSAARTFIEIGRHLERADMTTRILDVRSGNLLPKDPEELRPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDQHFPRAVARSLEALAWELQSLPRHDRALAAAALVRADALEADMQALARSPDELHAFIDELQI 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Match: UPI00109C64B0 (alpha-E domain-containing protein n=1 Tax=Halomonas sp. EAR18 TaxID=2518972 RepID=UPI00109C64B0)

HSP 1 Score: 416 bits (1069), Expect = 1.080e-143
Identity = 210/292 (71.92%), Postives = 245/292 (83.90%), Query Frame = 1 
Query:    1 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARHTDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 876
            SRVAENLYWMARYIERAEDTARL+SVNSHL+LDLP +  LGW+ LI++TG  E F+ ++    E+NVVHFLC + DN  SI+S+LA ARENLRTTRDVV REIWE +N+LYL V D AE+G++PRRRD+FLK VIRGCQ LTG+IEGTLSH  A+TFIELGR LERADMTTRI+DVRS +LLP++PEEL PFE+LQWMSVLKSLT YQMYRQQVRLRVRGPDVLRFLLQ+ + PR++A SLE L  EL  LPR DR  A  +LVRADV++AD+QALA S  +LH FIDELQI
Sbjct:    3 SRVAENLYWMARYIERAEDTARLVSVNSHLLLDLPHQTALGWSTLIDITGGDELFDKKYDRRSEKNVVHFLCVEPDNPGSILSSLAGARENLRTTRDVVSREIWELINELYLEVRDQAESGLTPRRRDAFLKRVIRGCQTLTGVIEGTLSHLSAKTFIELGRHLERADMTTRILDVRSGNLLPKDPEELRPFEHLQWMSVLKSLTGYQMYRQQVRLRVRGPDVLRFLLQNQHFPRAVARSLEALAWELQSLPRHDRALAAAALVRADVLEADMQALARSTDELHAFIDELQI 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Match: A0A1I3FVT8_9GAMM (Uncharacterized conserved protein, Alpha-E superfamily n=3 Tax=Halomonas TaxID=2745 RepID=A0A1I3FVT8_9GAMM)

HSP 1 Score: 412 bits (1059), Expect = 3.010e-142
Identity = 207/292 (70.89%), Postives = 242/292 (82.88%), Query Frame = 1 
Query:    1 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARHTDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 876
            SRVAENLYW ARYIERAEDTARL+SVNSHL+LDLP    LGW+ LI++ G    F+ R+    E+NV+HFLC + DN  SI+S+LASARENLRTTRDVV REIWE++N+LYL V + ++ G+SPRRRDSFLK VIRGCQ +TGLIEGTLS+   R FIELGR LERADMTTRI+DVRS +LLP++PEEL PFENLQWMSVLKSLT YQMYRQQVRLRVRGPDVLRFLLQD + PR++A SLE+L  EL  LPR DR  A V+LVRA+V++AD+Q+LA SP  LH FIDELQI
Sbjct:    3 SRVAENLYWTARYIERAEDTARLVSVNSHLLLDLPHHTALGWSTLIDIMGCESRFDERYDRRNEKNVLHFLCVERDNPGSILSSLASARENLRTTRDVVSREIWEQINELYLDVREQSDAGLSPRRRDSFLKRVIRGCQTVTGLIEGTLSYTATRCFIELGRNLERADMTTRIIDVRSGNLLPKDPEELRPFENLQWMSVLKSLTGYQMYRQQVRLRVRGPDVLRFLLQDRHFPRAVARSLESLSWELQSLPRHDRALAAVALVRAEVLEADVQSLARSPDDLHAFIDELQI 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Match: A0A086D3S0_9GAMM (Alpha-E domain-containing protein n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A086D3S0_9GAMM)

HSP 1 Score: 407 bits (1045), Expect = 4.050e-140
Identity = 200/292 (68.49%), Postives = 240/292 (82.19%), Query Frame = 1 
Query:    1 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARHTDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 876
            SRVAENLYWMARY+ERAEDTARL+SVNS+L+LD+P R  L W+ LI++TGS E F+A + +  ERNV+ FLC   ++  SI+S+LA+ARENLRTTRDVVPREIWEE+NQ YL + +  ++G+ PR RD+FLKSV+R CQ LTGLIEGTLSH  ARTF+ LGR LERADMTTRI+DVRS +LLP+NPEEL+PFE+LQWMSVLKSLTAYQMYRQ VRLRVRGPDVLRFLLQD +LPRS+  SLE +  EL  LP  DRP A  +LVRA+V +AD+Q LA +P +LH  IDE QI
Sbjct:    3 SRVAENLYWMARYVERAEDTARLISVNSNLLLDMPARAALSWSTLIDITGSEETFDALYGERSERNVIDFLCLSREHTGSILSSLANARENLRTTRDVVPREIWEEINQCYLEIQEQTQSGLKPRHRDAFLKSVVRACQTLTGLIEGTLSHTEARTFLSLGRHLERADMTTRILDVRSDNLLPRNPEELIPFEHLQWMSVLKSLTAYQMYRQAVRLRVRGPDVLRFLLQDHDLPRSVLRSLEEVSWELQTLPNHDRPLAVATLVRAEVAEADVQTLARAPEQLHQLIDEFQI 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Match: A0A1Q8SVZ2_9GAMM (Alpha-E domain-containing protein n=9 Tax=Salinicola TaxID=404432 RepID=A0A1Q8SVZ2_9GAMM)

HSP 1 Score: 396 bits (1017), Expect = 8.400e-136
Identity = 195/292 (66.78%), Postives = 236/292 (80.82%), Query Frame = 1 
Query:    1 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARHTDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 876
            SRVAENLYW+ARY+ERAEDTARL+SVNS+L+LD+PG+  L W+ LI++TGS + F+    +  ERNVV FLC   ++D+SI+S+LA+ARENLRTTRDVVPREIWEE+N  YL +++  + G+  R RD FLK V R CQ LTGLIEGTLSH  ARTF+ LGR LERADMTTRI+DVRS +LLP+NPEEL+PFE+LQWMSVLKSLTAYQMYR+ VRLRVRGPDVLRFLLQD  LPRS+  SLE +  EL  LP  DRP A  +LVRA+V +AD+Q+LA +P +LH  IDE QI
Sbjct:    3 SRVAENLYWLARYVERAEDTARLISVNSNLLLDMPGKAALSWSTLIDITGSGDVFDTLFEERNERNVVEFLCLSREHDSSILSSLANARENLRTTRDVVPREIWEEINHCYLEISELTQTGMKARNRDEFLKRVTRACQTLTGLIEGTLSHTEARTFLTLGRHLERADMTTRIIDVRSNNLLPRNPEELIPFEHLQWMSVLKSLTAYQMYRRAVRLRVRGPDVLRFLLQDRALPRSVLRSLEEVSWELQALPNHDRPLAVAALVRAEVAEADVQSLARAPDQLHQLIDEFQI 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Match: A0A172YKG0_9GAMM (Alpha-E domain-containing protein n=3 Tax=Halotalea alkalilenta TaxID=376489 RepID=A0A172YKG0_9GAMM)

HSP 1 Score: 394 bits (1012), Expect = 5.000e-135
Identity = 193/292 (66.10%), Postives = 236/292 (80.82%), Query Frame = 1 
Query:    1 SRVAENLYWMARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARHTDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQLYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIELGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQMYRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAATVSLVRADVVDADIQALAHSPSKLHLFIDELQI 876
            SRVAENLYW+ARY+ERAEDTARL++VN+HL+LD P    LGWA LIE+TGSL++FN  + +F ERNV+ FLC D    +S++S+LA+ARENLRTTRD+VPREIWE+VN LY+    HA + ++  RR+ FLK +IRGCQ +TGL EGTLS   A TF+ELGRQLERADMTTRIVDVRS +LLP+NPEEL PFENLQWMSVLKSLT YQMYRQQVRLRVRGPDVL FLL++P  PR++A  L+++   L  LPR DRP A  +LVRA+V +AD+++LA SP  L L ID+LQI
Sbjct:    3 SRVAENLYWVARYLERAEDTARLVNVNTHLLLDFPQAANLGWATLIEITGSLDSFNELYDEFSERNVLAFLCTDRSYSSSLLSSLAAARENLRTTRDIVPREIWEQVNGLYMEAVAHASSSLALARREEFLKRIIRGCQTVTGLFEGTLSRTQAFTFVELGRQLERADMTTRIVDVRSGNLLPRNPEELTPFENLQWMSVLKSLTGYQMYRQQVRLRVRGPDVLEFLLKEPTFPRAVAYCLDSISDNLRTLPRYDRPLAASTLVRAEVAEADVRSLARSPDDLRLAIDKLQI 294
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84423.19686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1A9R3E4_9GAMM3.420e-20197.60Alpha-E domain-containing protein n=55 Tax=root Ta... [more]
A0A354XJZ7_HALSX1.300e-18891.10Alpha-E domain-containing protein n=6 Tax=Halomona... [more]
UPI001D0A75683.340e-18086.99alpha-E domain-containing protein n=1 Tax=Halomona... [more]
A0A6M4FIV4_9GAMM9.660e-14972.26Alpha-E domain-containing protein n=1 Tax=Halomona... [more]
A0A139CDY3_9GAMM1.040e-14772.95Alpha-E domain-containing protein n=4 Tax=Halomona... [more]
UPI00109C64B01.080e-14371.92alpha-E domain-containing protein n=1 Tax=Halomona... [more]
A0A1I3FVT8_9GAMM3.010e-14270.89Uncharacterized conserved protein, Alpha-E superfa... [more]
A0A086D3S0_9GAMM4.050e-14068.49Alpha-E domain-containing protein n=4 Tax=Gammapro... [more]
A0A1Q8SVZ2_9GAMM8.400e-13666.78Alpha-E domain-containing protein n=9 Tax=Salinico... [more]
A0A172YKG0_9GAMM5.000e-13566.10Alpha-E domain-containing protein n=3 Tax=Halotale... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84423contigM-pyrifera_M_contig84423:3..878 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score546.6
Seed ortholog evalue6.9e-153
Seed eggNOG ortholog1380358.JADJ01000024_gene2266
Hectar predicted targeting categoryother localisation
EggNOG free text desc.A predicted alpha-helical domain with a conserved ER motif.
EggNOG OGs1MVZK@1224,1RN2Y@1236,1XJ47@135619,COG2307@1,COG2307@2
COG Functional cat.S
Best tax levelOceanospirillales
Best eggNOG OGNA|NA|NA
Exons1
Model size876
Cds size849
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816751.5801992-UTR-M-pyrifera_M_contig84423:2..291622816751.5801992-UTR-M-pyrifera_M_contig84423:2..29Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig84423 3..29 +
1692278156.9500098-UTR-M-pyrifera_M_contig84423:2..291692278156.9500098-UTR-M-pyrifera_M_contig84423:2..29Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig84423 3..29 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816751.5945306-CDS-M-pyrifera_M_contig84423:29..8781622816751.5945306-CDS-M-pyrifera_M_contig84423:29..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84423 30..878 +
1692278156.9685986-CDS-M-pyrifera_M_contig84423:29..8781692278156.9685986-CDS-M-pyrifera_M_contig84423:29..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84423 30..878 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84423.19686.1prot_M-pyrifera_M_contig84423.19686.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84423 30..878 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84423.19686.1

>prot_M-pyrifera_M_contig84423.19686.1 ID=prot_M-pyrifera_M_contig84423.19686.1|Name=mRNA_M-pyrifera_M_contig84423.19686.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=283bp
MARYIERAEDTARLLSVNSHLMLDLPGRLPLGWAPLIEMTGSLEAFNARH
TDFEERNVVHFLCADTDNDTSIISALASARENLRTTRDVVPREIWEEVNQ
LYLSVADHAENGVSPRRRDSFLKSVIRGCQALTGLIEGTLSHGPARTFIE
LGRQLERADMTTRIVDVRSASLLPQNPEELLPFENLQWMSVLKSLTAYQM
YRQQVRLRVRGPDVLRFLLQDPNLPRSIACSLETLGHELALLPRQDRPAA
TVSLVRADVVDADIQALAHSPSKLHLFIDELQI
back to top

mRNA from alignment at M-pyrifera_M_contig84423:3..878+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84423.19686.1 ID=mRNA_M-pyrifera_M_contig84423.19686.1|Name=mRNA_M-pyrifera_M_contig84423.19686.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig84423:3..878+ (Macrocystis pyrifera P11B4 male)
TCACGCGTTGCAGAGAACCTCTACTGGATGGCGCGCTATATTGAGCGTGC
TGAAGATACCGCCCGTTTGCTGAGCGTCAACAGTCACCTCATGCTCGATT
TGCCGGGGCGCCTGCCGCTGGGTTGGGCGCCGCTAATTGAAATGACCGGC
AGCCTGGAAGCCTTTAATGCACGCCATACCGACTTCGAAGAGCGTAACGT
GGTGCACTTTTTATGCGCCGATACCGACAATGATACTTCGATTATCTCCG
CGCTTGCCAGTGCCCGGGAGAACCTGAGAACCACTCGGGATGTGGTGCCC
CGGGAGATTTGGGAAGAGGTTAACCAGCTCTATCTGAGCGTCGCCGACCA
TGCCGAAAACGGCGTTAGCCCACGTCGGCGCGATAGTTTTCTTAAAAGCG
TTATTCGTGGTTGCCAGGCGTTAACGGGCCTGATTGAAGGCACGTTAAGC
CATGGCCCTGCACGCACCTTTATTGAGCTGGGGCGTCAGTTAGAGCGGGC
CGATATGACCACGCGCATTGTGGATGTGCGCTCCGCTAGCCTGCTGCCAC
AAAACCCTGAAGAGTTGTTGCCGTTTGAGAACCTGCAGTGGATGAGCGTG
CTCAAGTCACTGACTGCCTACCAGATGTATCGCCAGCAGGTGCGCTTGCG
TGTACGAGGCCCCGATGTGCTGCGCTTTTTGCTGCAAGACCCCAACCTGC
CGCGCTCAATTGCGTGTAGCCTCGAAACCCTGGGTCATGAGCTGGCACTA
CTGCCGCGCCAGGATCGTCCGGCGGCCACCGTTTCGCTGGTGCGTGCCGA
CGTGGTGGATGCCGATATTCAAGCACTAGCCCACTCACCCAGCAAGCTGC
ACTTGTTTATAGACGAACTACAGATT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig84423:3..878+

>mRNA_M-pyrifera_M_contig84423.19686.1 ID=mRNA_M-pyrifera_M_contig84423.19686.1|Name=mRNA_M-pyrifera_M_contig84423.19686.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1698bp|location=Sequence derived from alignment at M-pyrifera_M_contig84423:3..878+ (Macrocystis pyrifera P11B4 male)
ATGGCGCGCTATATTGAGCGTGCTGAAGATACCGCCCGTTTGCTGAGCGT
CAACAGTCACCTCATGCTCGATTTGCCGGGGCGCCTGCCGCTGGGTTGGG
CGCCGCTAATTGAAATGACCGGCAGCCTGGAAGCCTTTAATGCACGCCAT
ACCGACTTCGAAGAGCGTAACGTGGTGCACTTTTTATGCGCCGATACCGA
CAATGATACTTCGATTATCTCCGCGCTTGCCAGTGCCCGGGAGAACCTGA
GAACCACTCGGGATGTGGTGCCCCGGGAGATTTGGGAAGAGGTTAACCAG
CTCTATCTGAGCGTCGCCGACCATGCCGAAAACGGCGTTAGCCCACGTCG
GCGCGATAGTTTTCTTAAAAGCGTTATTCGTGGTTGCCAGGCGTTAACGG
GCCTGATTGAAGGCACGTTAAGCCATGGCCCTGCACGCACCTTTATTGAG
CTGGGGCGTCAGTTAGAGCGGGCCGATATGACCACGCGCATTGTGGATGT
GCGCTCCGCTAGCCTGCTGCCACAAAACCCTGAAGAGTTGTTGCCGTTTG
AGAACCTGCAGTGGATGAGCGTGCTCAAGTCACTGACTGCCTACCAGATG
TATCGCCAGCAGGTGCGCTTGCGTGTACGAGGCCCCGATGTGCTGCGCTT
TTTGCTGCAAGACCCCAACCTGCCGCGCTCAATTGCGTGTAGCCTCGAAA
CCCTGGGTCATGAGCTGGCACTACTGCCGCGCCAGGATCGTCCGGCGGCC
ACCGTTTCGCTGGTGCGTGCCGACGTGGTGGATGCCGATATTCAAGCACT
AGCCCACTCACCCAGCAAGCTGCACTTGTTTATAGACGAACTACAGATTA
TGGCGCGCTATATTGAGCGTGCTGAAGATACCGCCCGTTTGCTGAGCGTC
AACAGTCACCTCATGCTCGATTTGCCGGGGCGCCTGCCGCTGGGTTGGGC
GCCGCTAATTGAAATGACCGGCAGCCTGGAAGCCTTTAATGCACGCCATA
CCGACTTCGAAGAGCGTAACGTGGTGCACTTTTTATGCGCCGATACCGAC
AATGATACTTCGATTATCTCCGCGCTTGCCAGTGCCCGGGAGAACCTGAG
AACCACTCGGGATGTGGTGCCCCGGGAGATTTGGGAAGAGGTTAACCAGC
TCTATCTGAGCGTCGCCGACCATGCCGAAAACGGCGTTAGCCCACGTCGG
CGCGATAGTTTTCTTAAAAGCGTTATTCGTGGTTGCCAGGCGTTAACGGG
CCTGATTGAAGGCACGTTAAGCCATGGCCCTGCACGCACCTTTATTGAGC
TGGGGCGTCAGTTAGAGCGGGCCGATATGACCACGCGCATTGTGGATGTG
CGCTCCGCTAGCCTGCTGCCACAAAACCCTGAAGAGTTGTTGCCGTTTGA
GAACCTGCAGTGGATGAGCGTGCTCAAGTCACTGACTGCCTACCAGATGT
ATCGCCAGCAGGTGCGCTTGCGTGTACGAGGCCCCGATGTGCTGCGCTTT
TTGCTGCAAGACCCCAACCTGCCGCGCTCAATTGCGTGTAGCCTCGAAAC
CCTGGGTCATGAGCTGGCACTACTGCCGCGCCAGGATCGTCCGGCGGCCA
CCGTTTCGCTGGTGCGTGCCGACGTGGTGGATGCCGATATTCAAGCACTA
GCCCACTCACCCAGCAAGCTGCACTTGTTTATAGACGAACTACAGATT
back to top