mRNA_M-pyrifera_M_contig84286.19664.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Match: L8GL95_ACACA (Uncharacterized protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GL95_ACACA) HSP 1 Score: 124 bits (311), Expect = 1.230e-32 Identity = 72/189 (38.10%), Postives = 103/189 (54.50%), Query Frame = 1 Query: 1 HPLVERFPEDAHTTEG--ALQYFTARAIQALITGWAWEGAH----FLHTAKGAREGDGEDAVCAVEVHFVHKHHGEYMSLYVLAHARGKGLFPA-IVERVGLPVITVDDCRITEYLEKKGIPYKTFGRSGSHGWPEYRLVEAFYGDKVTRRTGVHLMNHIDEGVFVMASRYASEASMRAFCLHPLVQGD 546 HPLVERFP DA +TE +YF RA+Q L +GW + G + + EGD Y + Y+ A R +G+F + I ++T DC + +L K IPY + + EY +VEAFYG+KVTRR+GVHL+NHIDEG++++ ASE + RA+ +HP++QGD Sbjct: 9 HPLVERFPMDAASTEPHEVERYFQNRAVQLLSSGWKFTGKYERLEWGAITSAVHEGDPSKV---------------YHTAYIYADTRAQGVFTSWIKSHPDHAIVTTPDCGLEAFLTKHSIPYAVARKPQ---FEEYEMVEAFYGNKVTRRSGVHLINHIDEGLYILKRIGASEWAQRAYAIHPILQGD 179
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Match: A0A119HFF3_9BURK (Uncharacterized protein n=1 Tax=Burkholderia ubonensis TaxID=101571 RepID=A0A119HFF3_9BURK) HSP 1 Score: 118 bits (295), Expect = 3.250e-29 Identity = 76/180 (42.22%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 10 VERFPEDAHTTEGALQYFTARAIQALITGWAWEGAHFLHTAKGAREGDGEDAVCAVEVHFVHKHHGE-YMSLYVLAHARGKGLFPAIVERVGLPVITVDDCRITEYLEKKGIPYKTFGRSGSHGWPEYRLVEAFYGDKVTRRTGVHLMNHIDEGVFVMASRYASEASMRAFCLHPLVQGD 546 + R P DA T QYF R+ Q L G+ W G L A G E V EV F H+ G + S + L HARGKG +V+ +G P++T+ DC I + L G Y G+ EY+L++A Y D RR+ V LMNHIDEG+ VMA+ AS +MRAFCLHPL+Q D Sbjct: 3 IARLPHDASTEMEVRQYFDTRSRQLLHEGYQWNGE--LAWAPGF-----ESEV--YEVEFTHRDTGTAFASYFALPHARGKGHLRKLVD-LGKPIVTLTDCNIEDALRHVGANYVLAGQLTQS--TEYKLIQAQYADGRARRSQVFLMNHIDEGLAVMAAVGASNCAMRAFCLHPLLQND 170
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Match: UPI00075CB143 (hypothetical protein n=2 Tax=Burkholderia ubonensis TaxID=101571 RepID=UPI00075CB143) HSP 1 Score: 112 bits (280), Expect = 5.220e-27 Identity = 72/179 (40.22%), Postives = 98/179 (54.75%), Query Frame = 1 Query: 10 VERFPEDAHTTEGALQYFTARAIQALITGWAWEGAHFLHTAKGAREGDGEDAVCAVEVHFVHKHHGEYMSLYVLAHARGKGLFPAIVERVGLPVITVDDCRITEYLEKKGIPYKTFGRSGSHGWPEYRLVEAFYGDKVTRRTGVHLMNHIDEGVFVMASRYASEASMRAFCLHPLVQGD 546 + R P DA + QY+ R Q L G+ W+GA L A G EGD E F +H + S + L HARGKG +V +G ++T+ DC I + L G Y+ G+ EY+L++A Y D+ +R+ V LMNHIDEG+ VMA+ AS +MRAFCLHPL+Q D Sbjct: 4 IARLPHDAASEAEVRQYYDTRGRQLLHEGYWWDGA--LAWAPGF-EGD------VYETAFT-QHGKTFASYFALPHARGKGHLRKLVA-LGKAIVTLPDCNIEDALRHVGADYRLAGQLTDSA--EYKLIQAEYADQRAKRSRVFLMNHIDEGLAVMAAVGASTLAMRAFCLHPLLQSD 169
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Match: A0A104Z648_9BURK (Uncharacterized protein n=3 Tax=Burkholderia ubonensis TaxID=101571 RepID=A0A104Z648_9BURK) HSP 1 Score: 97.4 bits (241), Expect = 2.000e-21 Identity = 64/166 (38.55%), Postives = 91/166 (54.82%), Query Frame = 1 Query: 52 LQYFTARAIQALITGWAWEGAHFLHTAKGAREGDGEDAVCAVEVHFVHKHHGE-YMSLYVLAHARGKGLFPAIVERVGLPVITVDDCRITEYLEKKGIPYKTFGRSGSHGWPEYRLVEAFYGDKVTRRTGVHLMNHIDEGVFVMASRYASEASMRAFCLHPLVQGD 546 +QY+ R Q L + W GA + G +GE E F + G+ + S + L HARGKG +V +G ++T+ DC I + L Y+ G+ EY+L++A YGD+ +R+ V LMNHIDEG+ VMA+ AS +MRAFCLHPL+Q D Sbjct: 1 MQYYDTRGRQLLHEAFVWSGA--IAWVPGF---EGE----VYETEFTQR--GKTFASYFALPHARGKGHLRKLVG-LGKTIVTLPDCHIEDALRHVSADYRLAGQLTET--VEYKLIQAEYGDQRAKRSRVFLMNHIDEGLAVMAAVEASSLAMRAFCLHPLLQND 152
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Match: A0A5C7JNY5_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A5C7JNY5_9SPIR) HSP 1 Score: 90.9 bits (224), Expect = 8.380e-19 Identity = 61/184 (33.15%), Postives = 93/184 (50.54%), Query Frame = 1 Query: 16 RFPEDAHTTEGALQYFTARAIQALITGWAWEGAHFLHTAKGAREGDGEDAVCAVEVH-FVHKHHGEYMSLYVLAHARGKGLFPAIV----ERVG--LPVITVDDCRITEYLEKKGIPYKTFGRSGSHGWPEYRLVEAFYGDKVTRRTGVHLMNHIDEGVFVMASRYASEASMRAFCLHPLVQGD 546 RF ++ T E L+Y+T R++Q AH G + G+ V V V ++ SLYV RG G++ + E++G + +IT +C + +YL K IP+ G PEY+L+E YGD R+GV+LMNHIDEG++++ A + A+ LHP+ QGD Sbjct: 2 RFNKNGRTFEEVLEYYTNRSVQL---------AH-----AGVKMGNNTQLTEGVWVEQTVDWSDEKFYSLYVYEQFRGNGIYHKLYLDKCEQLGYRINIITSTNCGLVDYLAHKNIPHLVV--DGLTQTPEYKLIETIYGDNKAERSGVYLMNHIDEGLYILYKINARTKAKLAYILHPVFQGD 169
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Match: UPI001683AD3A (hypothetical protein n=1 Tax=Spirosoma profusum TaxID=2771354 RepID=UPI001683AD3A) HSP 1 Score: 85.9 bits (211), Expect = 5.000e-17 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 289 VITVDDCRITEYLEKKGIPYKTFGRSGSHGWPEYRLVEAFYGDKVTRRTGVHLMNHIDEGVFVMASRYASEASMRAFCLHPLVQGD 546 V+ DDCR+ +YL K I Y S + EY L+ AFYG + +R+GV+LMNHIDEG+F++ AS+ + +A+CLHP++Q D Sbjct: 80 VLITDDCRLDDYLAKNNINYVAVTLSL---FREYELISAFYGAQKAQRSGVYLMNHIDEGLFILEKIQASDVAKKAYCLHPIIQSD 162
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Match: A0A7V9LA38_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V9LA38_9DELT) HSP 1 Score: 71.2 bits (173), Expect = 2.740e-12 Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 1 Query: 385 EYRLVEAFYGDKVTRRTGVHLMNHIDEGVFVMASRYASEASMRAFCLHPLVQGD 546 EYR + A+YG++ RR+GV L+ HIDEG+ ++ AS +MRAFCLHPLVQGD Sbjct: 10 EYRAIAAWYGERTARRSGVRLIAHIDEGLAILERLGASSLAMRAFCLHPLVQGD 63
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Match: D2W122_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2W122_NAEGR) HSP 1 Score: 72.0 bits (175), Expect = 4.860e-12 Identity = 57/183 (31.15%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 4 PLVERFPEDAHTTEGALQYFTARAIQALITGWAWEGAHFLHTAKGAREGDGEDAVCAVEV-HFVHKHHGE-YMSLYVLAHARGKGLFPAIVERVGLPVITVDDCRITEYLEKKGIPYKTFGRSGSHGWPEYRLVEAFYGDKVTRRTGVHLMNHIDEGVFVMASRYASEASMRAFCLHPLVQGD 546 P RF A LQY R Q+L + +G H+ G E EDA V + F+ K+ E ++ YV R + +I D + + L + + Y + EY+ VE YGD R+GVHL+NHIDEG++++ ASE + +A+ LHPL+QGD Sbjct: 8 PHSPRFNSQAVELNEILQYIQNRCTQSL----SCDGYHYGWN--GQYECVLEDAAIKVNITKFIEKNREEQFVYYYVRPDYRKDDKVIDYIVNESSELIVEKDSFLLDRLNGRKVVYWE-----KCNFVEYQAVEKAYGDHHAERSGVHLINHIDEGMYILKKVGASELAQKAYILHPLIQGD 179
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Match: R4VVN2_9CAUD (Uncharacterized protein n=2 Tax=unclassified Schitoviridae TaxID=2853013 RepID=R4VVN2_9CAUD) HSP 1 Score: 69.3 bits (168), Expect = 6.720e-12 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 385 EYRLVEAFYGDKVTRRTGVHLMNHIDEGVFVMASRYASEASMRAFCLHPLVQ 540 EY ++ FYGDK +R+GV LMNHIDEG+ ++ S AS+ + AFCLHP+VQ Sbjct: 4 EYNTIKKFYGDKTAKRSGVPLMNHIDEGLEILKSLNASQTELAAFCLHPIVQ 55
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Match: A0A7Y6XFJ6_9DELT (Uncharacterized protein n=1 Tax=Myxococcus sp. AM011 TaxID=2745200 RepID=A0A7Y6XFJ6_9DELT) HSP 1 Score: 68.9 bits (167), Expect = 3.110e-11 Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 385 EYRLVEAFYGDKVTRRTGVHLMNHIDEGVFVMASRYASEASMRAFCLHPLVQGD 546 EYR ++AFYG + RR+GV ++HIDEG++V+ + ASE + RA+CLHPLVQ D Sbjct: 7 EYRAIQAFYGQRRARRSGVPYLHHIDEGLWVLRALGASEHAQRAYCLHPLVQED 60 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84286.19664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84286.19664.1 >prot_M-pyrifera_M_contig84286.19664.1 ID=prot_M-pyrifera_M_contig84286.19664.1|Name=mRNA_M-pyrifera_M_contig84286.19664.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp HPLVERFPEDAHTTEGALQYFTARAIQALITGWAWEGAHFLHTAKGAREGback to top mRNA from alignment at M-pyrifera_M_contig84286:6..722- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84286.19664.1 ID=mRNA_M-pyrifera_M_contig84286.19664.1|Name=mRNA_M-pyrifera_M_contig84286.19664.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=717bp|location=Sequence derived from alignment at M-pyrifera_M_contig84286:6..722- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84286:6..722- >mRNA_M-pyrifera_M_contig84286.19664.1 ID=mRNA_M-pyrifera_M_contig84286.19664.1|Name=mRNA_M-pyrifera_M_contig84286.19664.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig84286:6..722- (Macrocystis pyrifera P11B4 male)back to top |