mRNA_M-pyrifera_M_contig8427.19659.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8427.19659.1
Unique NamemRNA_M-pyrifera_M_contig8427.19659.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Match: A0A6H5KLA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA6_9PHAE)

HSP 1 Score: 426 bits (1096), Expect = 1.690e-134
Identity = 401/826 (48.55%), Postives = 451/826 (54.60%), Query Frame = 1 
Query:    1 KAPHVSQCRHWDCGVACAQMVLQGLGREVERSSLLASLRTQSVWTIDLAMLLHRQG-VRFTYCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAKVGAVQKSFSWKELAVLVSGYDYAAIVLVDSRYLYPATHH-----TPAPALAPP----------------SPANAVRLGGVSPTWSTPKRLNEDDEGGVFRGGRVGDDEGGAPSRRXXRRPRALQGNGRQHQGAEVSSVRAAGPTRFPSARSAPNLMAPPSVSSIAPGAKQATRG----RDAR-GNLRVCPAPHSLAWDGKLVSPLVTPPLRQTARKMLGRE------PHGALEFIDALKRQRRDGPRDHAETCLRRSSSAVTLEARP-STSAGTPPSPADAREAGSPPGFFPVLAXXXXXXXXXXXXXXVSITSSTGSPGPCHEAAPSDGSSYCGHYILLVGWSEADGVFIARDPALPPPSPPAGASTIALGGRGDPGAPVYITLTPEVLDRARLSYGTDEDVVVVDLACSRKGVVTAAPLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADASGFKEWAWPDPVAWFGGY------APGGVAGDGGVRLSGSDSKTGGGVXXXXXXXVRVGVAGEGLSQGGVESAAKRLASLLSLAASGWRFPTVGDAYRGPRVPWKTGGWGATXXXXXXXXXGGNDLETQEER------ERWDVRMASAMEGLLQGGRRAAYTXXXXXXXG--------------AHTVXXXXXXXXXXXXX--------------FRDSLADAVDSPGGAGAECCAALERSTLHAWNPPGSPVSPSIGAVMSPA 2256
            KAPHVSQ  HWDCGV+CAQMVL+GLGRE ERSSLLASL T+SVWTIDLAMLLHRQG   F Y TRT GVTE YST+DFYRANFD DA RVQSLFK AEEA VGAVQK+FSW+ELAVLVS Y+YAAIVLVDSRYL+  ++        APALAP                 +  +AV       +WSTPKR  E+ E           +E GA   R                         AG T  P  RS   L  P      A GA  A       RDA  G+LR+ PA   +  DG  ++  VTPP  ++ RK L  +        G    I     +  +G RD   +      SA+     P S                 PP   P+L                 + S   S G    ++P D SSYCGHYILLVGWSEAD VFIARDPAL   +P    +    GG GDP A   I LTPE LDRAR SYGTDEDV+V+DLA SRKG V  APLAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ASGFKEWAWPD  AWF G+      +   V G GG   SG D   G                  G+   G ESAA+RLASLLSLAASG RFPTVGDAYRGP + W +G  G  XXXXXXXXX                 ERW VR ASAM  LL+GGRRA YT    XXX               A+T+   XXXXXXXXXX               RD LAD  D+PGGAGAECC      ++     PGSPVSP+   V+SPA
Sbjct:   44 KAPHVSQICHWDCGVSCAQMVLRGLGREAERSSLLASLGTRSVWTIDLAMLLHRQGDPLFMYGTRTVGVTEAYSTIDFYRANFDHDAPRVQSLFKAAEEANVGAVQKTFSWQELAVLVSSYNYAAIVLVDSRYLHATSYRGSTAAAAAPALAPXXXXXXXXXXXXXXXXXAAVDAVESTPPQQSWSTPKRHREEAE-----------EEAGA---RGWXXXXXXXXXXXXXXXXXXXXXXXAGAT--PIERS---LGGPREALGAASGASAALASPLSARDANTGHLRLSPA---VGDDGGDMAVFVTPPAPKSGRKYLAGDLGASSRAGGTAGVISQQGGE--NGRRDDQMSAEPPVQSAMPSATGPVSXXXXXXXXXXXXXXXXXPP---PILVGSPPPLKA------AGLVSPPASGGDRAASSPKD-SSYCGHYILLVGWSEADRVFIARDPALTSSTPSMATAPGGAGG-GDPNAHACIALTPEALDRARRSYGTDEDVLVIDLARSRKGGVPTAPLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEASGFKEWAWPDRAAWFSGHHAAIVDSAADVDGTGGAGASGGDKVVG----------------RRGMPLSGAESAARRLASLLSLAASGLRFPTVGDAYRGPGILWGSGATGGXXXXXXXXXXXXXXXXXXXXXXXXXXXERWAVRTASAM--LLEGGRRAVYTMEGLXXXXXXXXXXXXXXXXXXANTMEGLXXXXXXXXXXXXXXXXXXXXAAYNLRDQLADVADAPGGAGAECC------SIAVLTAPGSPVSPARMPVVSPA 810
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BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Match: D8LB31_ECTSI (Chromosome 22 open reading frame 13, isoform CRA_c n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB31_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 1.080e-88
Identity = 321/788 (40.74%), Postives = 343/788 (43.53%), Query Frame = 1 
Query:    1 KAPHVSQCRHWDCGVACAQMVLQGLGREVERSSLLASLRTQSVWTIDLAMLLHRQGVRFTYCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAKVGAVQKSFSWKELAVLVSGYDYAAIVLVDSRYLYPATHHTPAPALAPPSPANAVRLGGVSPTWSTPKRLNEDDEGGVFRGGRVGDDEGGAPSRRXXRRPRALQGNGRQHQGAEVSSVRAAGPTRFPSARSAPNLMAPPSVSSIAPGAKQATRGRDARGNLRVCPAPHSLAWDGKLVSPLVTPPLRQTARKMLGREPHGALEFIDALKRQRRDGPRDHAETCLRRSSSAVTLEARPSTSAGTPPSPADAREAGSPPGFFPVLAXXXXXXXXXXXXXXVSITSSTGSPGPCHEAAPSDGSSYCGHYILLVGWSEADGVFIARDPALPPPSPPAGASTIALGGRGDPGAPVYITLTPEVLDRARLSYGTDEDVVVVDLACSRKGVVTAAPLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADASGFKEWAWPDPVAWFGGY------APGGVAGDGGVRLSGSDSKTGGGVXXXXXXXVRVGVAGEGLSQGGVESAAKRLASLLSLAASGWRFPTVGDAYRGPRVPWKTGGWGATXXXXXXXXXGGNDLETQEER--ERWDVRMASAMEGLLQGGRRAAYTXXXXXXXG--------------AHTVXXXXXXXXXXXXX--------------FRDSLADAVDSPGGAGAECCAALERSTLHAWNPPGSPVSPSIGAVMSPA 2256
            KAPHVSQ  HWDCGV+CAQMVL+GLGRE ERSSLLASL T+SVWTIDLAMLLHRQGVRF Y TRTAGVTE YST+DFYRANFD DA RVQSLFK                                                          A RL                                          P A  G+            RAA P                                                                                           PRD                                                                                 SSYCGHYILLVGWSEADGVFIARDPALP  +P    +    GG GDP A   I LTPE LDRAR SYGTDEDV+V+DLA SRKG V  APLAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ASGFKEWAWPD  AWF G+      +   V G GG   SG D   G                  G+   G ESAA+RLASLLSLAASG RFPTVGDAYRGP V W  G  G  XXXXXXXXX             ERW VRMASAM  LL+GGRRA YT    XXX               A+T+   XXXXXXXXXX               RD LAD  D+PGGAGAECC      ++     PGSPVSP+   V+SPA
Sbjct:   31 KAPHVSQICHWDCGVSCAQMVLRGLGREAERSSLLASLGTRSVWTIDLAMLLHRQGVRFMYGTRTAGVTEAYSTIDFYRANFDHDAPRVQSLFK----------------------------------------------------------AARLES----------------------------------------PPASGGD------------RAASP-------------------------------------------------------------------------------------------PRD---------------------------------------------------------------------------------SSYCGHYILLVGWSEADGVFIARDPALPSSTPSTATAPGGAGG-GDPNAHACIALTPEALDRARRSYGTDEDVLVIDLARSRKGGVPTAPLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEASGFKEWAWPDRAAWFSGHHAAVVDSAANVDGTGGAGASGGDEVVG----------------RRGVPLSGAESAARRLASLLSLAASGLRFPTVGDAYRGPGVLWGNGATGGXXXXXXXXXXXXXXXXXXXXXXXERWAVRMASAM--LLEGGRRAVYTMEGLXXXXXXXXXXXXXXXXXXANTMEGLXXXXXXXXXXXXXXXXXXXXAAYNLRDQLADVADAPGGAGAECC------SIAVLTSPGSPVSPARLPVVSPA 511
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BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Match: A0A835ZG64_9STRA (Guanylyl cyclase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG64_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.180e-25
Identity = 68/166 (40.96%), Postives = 91/166 (54.82%), Query Frame = 1 
Query:    1 KAPHVSQCRHWDCGVACAQMVLQGLGREVERSSLLASLRTQSVWTIDLAMLLHRQGVRFTYCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAKVGAVQKSFSWKELAVLVSGYDYAAIVLVDSRYLYPATHHTPAPALAPPSPANAVRLGGVSPTWSTP 498
            K  H  Q   WDCGVAC  MVL  L R+  R +LLA+L T SVWTIDLA++LH  G+ F + TR+ GV+  Y  + FYR+ FD DA+RV   F+EA    +     S    ++  LV     A +VLVD+R+L    HH  + A      A+A  + G   T + P
Sbjct:   34 KLGHQKQLSTWDCGVACLMMVLSSLNRDHTRDTLLAALGTNSVWTIDLALILHEHGICFHFLTRSTGVSPAYKGIAFYRSQFDADAARVTRRFREARRRNLAVGVGSLEIADIRRLVELDACAVLVLVDARHL---PHHFKSAA------ASAAAVAGSGATAAAP 190
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BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Match: A0A7S2W2S7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2S7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 5.790e-23
Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = 1 
Query:    7 PHVSQCRHWDCGVACAQMVLQGLGREVERSSLLASLRTQSVWTIDLAMLLHRQGVRFT--YCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAKVGAVQKSFSWKELAVLVSGYDYAAIVLVDSRYLYP 405
            PHV Q R WDCGVAC QM+L  +GR      L A L   SVWTIDL  LL      F   +CT T G  E++S++DFY+A FD DA R+  LF++A EA +   Q S +  +L  LVS  D   I+L+D R + P
Sbjct:  151 PHVLQKRSWDCGVACVQMILSFVGRPRTFEELSAVLGATSVWTIDLVYLLRTFEFPFPCLFCTATVGAEESHSSLDFYKAEFDSDAVRINKLFQDAAEAGLSIEQTSVAQADLQALVSSCDILVIILLDFRIIRP 285
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BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Match: A0A2G9HAX0_9LAMI (Guanylate cyclase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HAX0_9LAMI)

HSP 1 Score: 103 bits (256), Expect = 2.250e-21
Identity = 54/130 (41.54%), Postives = 73/130 (56.15%), Query Frame = 1 
Query:    1 KAPHVSQCRHWDCGVACAQMVLQGLG-REVERSSLLASLRTQSVWTIDLAMLLHRQGVRFTYCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAKVGAVQKSFSWKELAVLVSGYDYAAIVLVD 387
            + PH++Q   WDCG+AC  MVL+ LG  E     L+    T S+WT+DLA LL +  V FTYCT T G    +S   +Y+    +D  RV  LF+EA EA +    +S S KE++  +    Y AI LVD
Sbjct:   55 EVPHINQQHTWDCGLACVLMVLKALGVYECNSQELVELCHTTSIWTVDLAYLLQKFSVSFTYCTVTLGANPDFSVETYYKDQLPKDLVRVNMLFQEAREAGIHIECRSVSAKEISEFILSGRYVAIALVD 184
[Close]
BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Match: A0A7J7RGG2_PIPKU (Guanylyl cyclase domain containing 1 n=2 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J7RGG2_PIPKU)

HSP 1 Score: 103 bits (257), Expect = 3.750e-21
Identity = 60/136 (44.12%), Postives = 87/136 (63.97%), Query Frame = 1 
Query:    7 PHVSQCRHWDCGVACAQMVLQGLGR--EVERSSLLASLR-TQSVWTIDLAMLLHRQGVRFTYCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAKVGAVQKSFSWKEL-AVLVSGYDYAAIVLVDSRYLY 402
            P + Q  HWDCG+AC++MVL+ LG+  + E    L  LR T+S+WTIDLA L+ R GVR  +CT+T GV + Y    FYR +FD + +RV  LF +A+  KV   +++ S +++ A L  G+   AIVLV+S  L+
Sbjct:   23 PIIQQLYHWDCGLACSRMVLRYLGQLDDSEFECALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRNQSFYRKHFDTEETRVNQLFAQAQACKVLVEKRTVSVQDIQAHLAQGH--VAIVLVNSGVLH 156
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BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Match: GUCD1_HUMAN (Protein GUCD1 n=26 Tax=Euarchontoglires TaxID=314146 RepID=GUCD1_HUMAN)

HSP 1 Score: 103 bits (257), Expect = 3.830e-21
Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 1 
Query:    7 PHVSQCRHWDCGVACAQMVLQGLGR----EVERSSLLASLRTQSVWTIDLAMLLHRQGVRFTYCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAKVGAVQKSFSWKEL-AVLVSGYDYAAIVLVDSRYLY 402
            P + Q  HWDCG+AC++MVL+ LG+    E ER+     L T+S+WTIDLA L+H  GVR  +CT+T GV + Y    FYR +FD + +RV  LF +A+  KV   + + S K++ A L  G+   AIVLV+S  L+
Sbjct:   23 PVIQQLYHWDCGLACSRMVLRYLGQLDDSEFERALQKLQL-TRSIWTIDLAYLMHHFGVRHRFCTQTLGVDKGYKNQSFYRKHFDTEETRVNQLFAQAKACKVLVEKCTVSVKDIQAHLAQGH--VAIVLVNSGVLH 156
[Close]
BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Match: UPI0003F0C4D7 (protein GUCD1 isoform X2 n=3 Tax=Eutheria TaxID=9347 RepID=UPI0003F0C4D7)

HSP 1 Score: 102 bits (254), Expect = 9.370e-21
Identity = 60/136 (44.12%), Postives = 85/136 (62.50%), Query Frame = 1 
Query:    7 PHVSQCRHWDCGVACAQMVLQGLGR---EVERSSLLASLRTQSVWTIDLAMLLHRQGVRFTYCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAKVGAVQKSFSWKEL-AVLVSGYDYAAIVLVDSRYLY 402
            P + Q  HWDCG+ACA+MVL+ LG+   E   S+L A   T+S+WTIDLA L+   GVR  +CT+T GV + Y    FYR +FD + +RV  LF +A+  KV   + + S +++ A L  G+   AIVLV+S  L+
Sbjct:   23 PVIQQLYHWDCGLACARMVLRYLGQLDDEEFESALQALQLTRSIWTIDLAYLMRHFGVRHRFCTQTLGVDKGYKNQSFYRKHFDTEETRVNQLFAQAKACKVLVEKCAVSIQDIQAHLAQGH--VAIVLVNSGVLH 156
[Close]
BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Match: A0A7J7CWN9_TRIWF (Protein GUCD1-like isoform X1 n=4 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CWN9_TRIWF)

HSP 1 Score: 103 bits (257), Expect = 9.620e-21
Identity = 54/130 (41.54%), Postives = 76/130 (58.46%), Query Frame = 1 
Query:    1 KAPHVSQCRHWDCGVACAQMVLQGLG-REVERSSLLASLRTQSVWTIDLAMLLHRQGVRFTYCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAKVGAVQKSFSWKELAVLVSGYDYAAIVLVD 387
            + PH++Q   WDCG+AC  MVL  +G  +    SL    RT S+WT+DLA LL +  VRF+Y T T G    +S   FY+     D  RV  LF++A EA++    +S S +E+++L+    Y AIVLVD
Sbjct:   55 EVPHINQQFSWDCGLACVLMVLSTIGINDFSIQSLAELCRTTSIWTVDLAYLLQKFSVRFSYFTVTFGANPDFSVETFYKEQLPNDLVRVDMLFQKAREAEINIQCRSISGEEISILILSGKYIAIVLVD 184
[Close]
BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Match: A0A2I3T318_PANTR (Guanylyl cyclase domain containing 1 n=25 Tax=Simiiformes TaxID=314293 RepID=A0A2I3T318_PANTR)

HSP 1 Score: 103 bits (257), Expect = 1.240e-20
Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 1 
Query:    7 PHVSQCRHWDCGVACAQMVLQGLGR----EVERSSLLASLRTQSVWTIDLAMLLHRQGVRFTYCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAKVGAVQKSFSWKEL-AVLVSGYDYAAIVLVDSRYLY 402
            P + Q  HWDCG+AC++MVL+ LG+    E ER+     L T+S+WTIDLA L+H  GVR  +CT+T GV + Y    FYR +FD + +RV  LF +A+  KV   + + S K++ A L  G+   AIVLV+S  L+
Sbjct:   79 PVIQQLYHWDCGLACSRMVLRYLGQLDDSEFERALQKLQL-TRSIWTIDLAYLMHHFGVRHRFCTQTLGVDKGYKNQSFYRKHFDTEETRVNQLFAQAKACKVLVEKCTVSVKDIQAHLAQGH--VAIVLVNSGVLH 212
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8427.19659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLA6_9PHAE1.690e-13448.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB31_ECTSI1.080e-8840.74Chromosome 22 open reading frame 13, isoform CRA_c... [more]
A0A835ZG64_9STRA1.180e-2540.96Guanylyl cyclase (Fragment) n=1 Tax=Tribonema minu... [more]
A0A7S2W2S7_9STRA5.790e-2345.93Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2G9HAX0_9LAMI2.250e-2141.54Guanylate cyclase n=1 Tax=Handroanthus impetiginos... [more]
A0A7J7RGG2_PIPKU3.750e-2144.12Guanylyl cyclase domain containing 1 n=2 Tax=Pipis... [more]
GUCD1_HUMAN3.830e-2144.53Protein GUCD1 n=26 Tax=Euarchontoglires TaxID=3141... [more]
UPI0003F0C4D79.370e-2144.12protein GUCD1 isoform X2 n=3 Tax=Eutheria TaxID=93... [more]
A0A7J7CWN9_TRIWF9.620e-2141.54Protein GUCD1-like isoform X1 n=4 Tax=Tripterygium... [more]
A0A2I3T318_PANTR1.240e-2044.53Guanylyl cyclase domain containing 1 n=25 Tax=Simi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8427contigM-pyrifera_M_contig8427:3042..6895 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score299.3
Seed ortholog evalue5.1e-78
Seed eggNOG ortholog2880.D8LB31
Preferred nameGUCD1
KEGG rclassRC00002,RC00078,RC02809,RC02889
KEGG koko:K13811,ko:K21852
KEGG ReactionR00509,R00529,R04928,R04929
KEGG Pathwayko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130
KEGG ModuleM00176
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Guanylylate cyclase
EggNOG OGsKOG4621@1,KOG4621@2759
Ec32 ortholog descriptionchromosome 22 open reading frame 13, isoform CRA_c
Ec32 orthologEc-27_005430.1
EC2.7.1.25,2.7.7.4
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons3
Model size2259
Cds size2259
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8427.19659.1prot_M-pyrifera_M_contig8427.19659.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8427 3042..6895 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816750.3416686-CDS-M-pyrifera_M_contig8427:3041..50181622816750.3416686-CDS-M-pyrifera_M_contig8427:3041..5018Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8427 3042..5018 -
1692278156.191595-CDS-M-pyrifera_M_contig8427:3041..50181692278156.191595-CDS-M-pyrifera_M_contig8427:3041..5018Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8427 3042..5018 -
1622816750.3523068-CDS-M-pyrifera_M_contig8427:5989..60981622816750.3523068-CDS-M-pyrifera_M_contig8427:5989..6098Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8427 5990..6098 -
1692278156.2048602-CDS-M-pyrifera_M_contig8427:5989..60981692278156.2048602-CDS-M-pyrifera_M_contig8427:5989..6098Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8427 5990..6098 -
1622816750.362096-CDS-M-pyrifera_M_contig8427:6722..68951622816750.362096-CDS-M-pyrifera_M_contig8427:6722..6895Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8427 6723..6895 -
1692278156.215468-CDS-M-pyrifera_M_contig8427:6722..68951692278156.215468-CDS-M-pyrifera_M_contig8427:6722..6895Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8427 6723..6895 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8427.19659.1

>prot_M-pyrifera_M_contig8427.19659.1 ID=prot_M-pyrifera_M_contig8427.19659.1|Name=mRNA_M-pyrifera_M_contig8427.19659.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=753bp
KAPHVSQCRHWDCGVACAQMVLQGLGREVERSSLLASLRTQSVWTIDLAM
LLHRQGVRFTYCTRTAGVTETYSTVDFYRANFDRDASRVQSLFKEAEEAK
VGAVQKSFSWKELAVLVSGYDYAAIVLVDSRYLYPATHHTPAPALAPPSP
ANAVRLGGVSPTWSTPKRLNEDDEGGVFRGGRVGDDEGGAPSRRRRRRPR
ALQGNGRQHQGAEVSSVRAAGPTRFPSARSAPNLMAPPSVSSIAPGAKQA
TRGRDARGNLRVCPAPHSLAWDGKLVSPLVTPPLRQTARKMLGREPHGAL
EFIDALKRQRRDGPRDHAETCLRRSSSAVTLEARPSTSAGTPPSPADARE
AGSPPGFFPVLASPPPLKPAALRPPPVSITSSTGSPGPCHEAAPSDGSSY
CGHYILLVGWSEADGVFIARDPALPPPSPPAGASTIALGGRGDPGAPVYI
TLTPEVLDRARLSYGTDEDVVVVDLACSRKGVVTAAPLAAAAAATALAAS
AASSAAAASALVGLFAMAAAAAAARADASGFKEWAWPDPVAWFGGYAPGG
VAGDGGVRLSGSDSKTGGGVGGGDGVGVRVGVAGEGLSQGGVESAAKRLA
SLLSLAASGWRFPTVGDAYRGPRVPWKTGGWGATGGWGATGGGGGNDLET
QEERERWDVRMASAMEGLLQGGRRAAYTMEGFLQGGAHTVEGLLEGGRRA
AYSFRDSLADAVDSPGGAGAECCAALERSTLHAWNPPGSPVSPSIGAVMS
PA*
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mRNA from alignment at M-pyrifera_M_contig8427:3042..6895-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8427.19659.1 ID=mRNA_M-pyrifera_M_contig8427.19659.1|Name=mRNA_M-pyrifera_M_contig8427.19659.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3854bp|location=Sequence derived from alignment at M-pyrifera_M_contig8427:3042..6895- (Macrocystis pyrifera P11B4 male)
AAGGCTCCCCATGTCAGTCAGTGCCGCCACTGGGACTGCGGCGTGGCCTG
CGCGCAGATGGTTCTCCAGGGGCTCGGGCGGGAGGTGGAGAGGTCGTCCT
TGCTGGCCTCCCTCCGCACGCAGAGCGTTTGGACGATCGACCTCGCCATG
CTCCTGCACCGCCAAGGCGTTAGGTGGGTTGTGATGGTCCCTAAGTCTCC
GTATGGTTCAGAGGGTGAGCGTGCCGTGCGCGGCGTGCCCTCGTGCTGTC
GCTGCTTGATTGTTGGCTGTACGTAATATGTGCTGCTGCTGCGGCATCGG
TGTGTTGCGCCTAGAGCGTGTTTTTTCGAAGCGCTCATAGCATGTATAGA
GGGGAATGGATATCTACGAGGCGAGCCTCTGCTGTAGAACCCATCACAGC
ATCATGTATTAACCAGCCCGGCGTTTGGAGGAGAGCGTATGAGTCGTGGA
AAATACCTCAAGCTGTCCGTCGGTATTAAGCTAGAGAAGAAGAGAAGTAC
ATATCGTCCGTCAACATGTGGCGTGGATGATAAAATAGGTGGTGTGCGGA
CGGGAGGGACGGCCGGGGGTTGCTGATGGCTTCCCGGATTATGAGCGTTT
TCTTGCCGAGCTATCCGGAGGCGGCAGGTATGCTGGCGCTTCCTGCATGC
ATCGTTCTTGATGTCTGTGTATGTGTGATTTGACTTGATCGATGGCGCAC
CCTTTGACTGCGCTCACACATGCACGCATACCTCTGACGTTTGTCGTGGG
TCTCGTGCGATCTCTGCCTCCTTCCCATCGTTGTTGTCACGCGACAGGTT
CACGTACTGCACGCGAACGGCGGGGGTGACGGAGACGTACTCGACGGTAG
ACTTCTACCGCGCCAACTTTGACCGCGACGCCTCCCGGGTACAGTCGCTA
TTCAAGGTGAACTTTGGAATAGGTTGTATTTTGCCGCTTGCGCGCCCTCC
CTCACACCGGTACGAGTAGTGCTCTAGAAGTATACGCGTGTCGTTAGAAA
TTATAAATTATTGTGCGCCGGTGGGGGCATGTCGGATGGATGGGCGGTGG
GTGGGGGGGGGGGGTGAGGGCGGTCTGCTCGTGTGCGGCCGTGTGTTTTA
TTCCATGCGGGCTTGCGTGTCTCAATAGGAAGACTTCCGAGGGAACGTGC
GGTACGAAGTGATGATTGCCGGAAAGGCATCGGCCACACGACGCACAGCC
CGGCCTGCTGGGTTGGGATTGGATTTTTTGGGTGCCCGACTTACAACGTG
AGGGGCTGTGCATACGCGTACTACTCCAGCACGCAACATGGTGGTTCTTG
TACTACTACTGCTGTGCGCTCACGCTGTTGAAGATGGTCAGCACACCTCG
GTCAGACCACAATGTAGGTCATCTAGAGCCGAATGTGCTGCTATCAGTAG
TTGTACGGGATCTGTATAGTACAGATCCAACCCAGGATATAAAAGTGTCG
ATAGATCATGCAGATCATACGGCTCCCCCCCGGCAACGTGAGCTAGATCA
TACAGATCATTCAGATCATACATCTATCTGCCTTGAAATGTGTAGATGGT
GAAGTAGGGATCGATGGTCCGCCGGAGTTATGGCATGAGTGGTAGGGCTT
TCTTTCCCTTGTCGTGTTTTCGGTGGCTGTGTTCTGGTCTCAAAATGGCT
AAAAGGGCTCTCCATGCAAAGCGACCCCGTAAGTGTTCGCGTGCAACTGT
GCCAAGAGGCGCTCTTGTCATTGCCCGAGAGACATCGGCAGAAACTGCAT
CACTCGATGCGCAGCTATAGACAGTGCGCGTCTCGCCGGCGCGCAACTGT
TACCGTGTATGCATGATTCCACCAACTGATTTCACTCAGCAACACAAACG
CCTCCGTACGTTTCCTCCCTTAAGCAGGAGGCAGAGGAGGCGAAGGTAGG
GGCAGTCCAGAAATCCTTCTCGTGGAAAGAGCTGGCGGTGCTCGTCTCCG
GCTACGATTACGCCGCGATCGTTCTCGTCGACTCTCGGTACCTCTACCCG
GCCACCCACCACACCCCTGCACCGGCTCTTGCGCCCCCGTCACCGGCGAA
TGCCGTGAGACTGGGTGGTGTTTCGCCAACTTGGAGTACCCCAAAACGTC
TTAACGAAGACGATGAAGGAGGCGTGTTTAGGGGTGGGAGGGTCGGTGAC
GACGAGGGCGGTGCGCCGTCGAGGCGACGAAGGAGGAGACCGAGAGCGTT
GCAGGGCAACGGCAGACAACACCAAGGCGCAGAGGTTTCCAGCGTGCGAG
CAGCGGGGCCGACTCGTTTTCCGTCTGCGCGCTCTGCGCCGAACTTGATG
GCGCCACCATCGGTGTCGTCGATCGCCCCGGGAGCTAAGCAGGCGACTCG
CGGACGAGACGCGCGAGGGAACTTGCGAGTGTGTCCCGCACCCCACTCGT
TAGCGTGGGATGGAAAATTGGTGTCCCCGTTGGTGACGCCGCCCCTGCGT
CAGACGGCGCGAAAGATGCTGGGAAGAGAACCCCACGGGGCGTTAGAGTT
TATTGACGCCCTCAAAAGGCAAAGGCGAGATGGGCCGCGCGACCATGCAG
AAACATGTTTACGGCGTTCGTCCTCCGCGGTGACGCTGGAAGCTCGTCCT
TCGACCTCTGCCGGCACTCCCCCGTCCCCGGCCGACGCCCGCGAAGCCGG
CAGCCCTCCGGGTTTTTTTCCGGTGCTTGCGTCACCCCCGCCGCTCAAGC
CTGCAGCGTTGCGCCCCCCCCCGGTCAGCATTACCAGCAGCACCGGCAGT
CCCGGACCTTGCCACGAAGCCGCGCCATCCGACGGCTCCTCTTACTGCGG
GCACTACATCCTCCTCGTCGGGTGGAGTGAGGCGGACGGGGTGTTTATCG
CGAGAGACCCCGCGCTGCCTCCGCCCTCCCCCCCTGCCGGCGCCTCAACG
ATCGCCCTGGGCGGCAGGGGTGACCCCGGCGCCCCCGTCTACATAACCCT
CACACCGGAGGTATTAGACAGGGCGCGGCTCAGCTATGGCACAGATGAGG
ACGTTGTGGTGGTAGATCTCGCGTGCAGCCGCAAAGGGGTCGTTACCGCC
GCGCCTCTAGCGGCAGCGGCGGCAGCGACGGCCCTGGCGGCGTCTGCCGC
GAGCTCAGCAGCCGCCGCCTCGGCTCTAGTGGGACTGTTTGCCATGGCGG
CGGCCGCGGCCGCTGCGCGTGCTGATGCGTCCGGGTTCAAGGAATGGGCG
TGGCCGGACCCTGTGGCGTGGTTCGGGGGGTACGCCCCGGGCGGGGTTGC
CGGCGACGGGGGCGTTCGCCTCAGCGGCAGCGACTCAAAGACAGGTGGTG
GAGTAGGAGGTGGGGATGGAGTAGGAGTAAGAGTTGGAGTTGCAGGAGAA
GGCTTGTCGCAAGGGGGTGTGGAATCGGCCGCCAAAAGGCTGGCCAGCCT
TCTGTCACTCGCGGCCAGCGGGTGGCGTTTCCCGACTGTCGGGGACGCTT
ACCGTGGCCCGCGGGTGCCGTGGAAGACCGGGGGCTGGGGCGCCACCGGT
GGCTGGGGCGCCACCGGTGGCGGTGGCGGAAACGACTTGGAAACGCAGGA
GGAGAGGGAGCGATGGGATGTCCGCATGGCTAGTGCCATGGAAGGACTAC
TGCAGGGCGGCAGACGGGCCGCGTACACCATGGAAGGGTTTCTGCAAGGG
GGCGCTCACACAGTGGAAGGCTTGCTGGAGGGGGGCAGAAGGGCCGCCTA
CAGTTTCCGGGATAGCCTTGCCGATGCGGTCGACTCTCCGGGAGGGGCAG
GCGCAGAGTGCTGCGCGGCTTTGGAGCGATCGACTCTCCACGCGTGGAAC
CCTCCCGGATCGCCAGTGTCGCCCAGCATCGGGGCGGTAATGTCTCCAGC
GTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8427:3042..6895-

>mRNA_M-pyrifera_M_contig8427.19659.1 ID=mRNA_M-pyrifera_M_contig8427.19659.1|Name=mRNA_M-pyrifera_M_contig8427.19659.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4518bp|location=Sequence derived from alignment at M-pyrifera_M_contig8427:3042..6895- (Macrocystis pyrifera P11B4 male)
AAGGCTCCCCATGTCAGTCAGTGCCGCCACTGGGACTGCGGCGTGGCCTG
CGCGCAGATGGTTCTCCAGGGGCTCGGGCGGGAGGTGGAGAGGTCGTCCT
TGCTGGCCTCCCTCCGCACGCAGAGCGTTTGGACGATCGACCTCGCCATG
CTCCTGCACCGCCAAGGCGTTAGAAGGCTCCCCATGTCAGTCAGTGCCGC
CACTGGGACTGCGGCGTGGCCTGCGCGCAGATGGTTCTCCAGGGGCTCGG
GCGGGAGGTGGAGAGGTCGTCCTTGCTGGCCTCCCTCCGCACGCAGAGCG
TTTGGACGATCGACCTCGCCATGCTCCTGCACCGCCAAGGCGTTAGGTTC
ACGTACTGCACGCGAACGGCGGGGGTGACGGAGACGTACTCGACGGTAGA
CTTCTACCGCGCCAACTTTGACCGCGACGCCTCCCGGGTACAGTCGCTAT
TCAAGGTTCACGTACTGCACGCGAACGGCGGGGGTGACGGAGACGTACTC
GACGGTAGACTTCTACCGCGCCAACTTTGACCGCGACGCCTCCCGGGTAC
AGTCGCTATTCAAGGAGGCAGAGGAGGCGAAGGTAGGGGCAGTCCAGAAA
TCCTTCTCGTGGAAAGAGCTGGCGGTGCTCGTCTCCGGCTACGATTACGC
CGCGATCGTTCTCGTCGACTCTCGGTACCTCTACCCGGCCACCCACCACA
CCCCTGCACCGGCTCTTGCGCCCCCGTCACCGGCGAATGCCGTGAGACTG
GGTGGTGTTTCGCCAACTTGGAGTACCCCAAAACGTCTTAACGAAGACGA
TGAAGGAGGCGTGTTTAGGGGTGGGAGGGTCGGTGACGACGAGGGCGGTG
CGCCGTCGAGGCGACGAAGGAGGAGACCGAGAGCGTTGCAGGGCAACGGC
AGACAACACCAAGGCGCAGAGGTTTCCAGCGTGCGAGCAGCGGGGCCGAC
TCGTTTTCCGTCTGCGCGCTCTGCGCCGAACTTGATGGCGCCACCATCGG
TGTCGTCGATCGCCCCGGGAGCTAAGCAGGCGACTCGCGGACGAGACGCG
CGAGGGAACTTGCGAGTGTGTCCCGCACCCCACTCGTTAGCGTGGGATGG
AAAATTGGTGTCCCCGTTGGTGACGCCGCCCCTGCGTCAGACGGCGCGAA
AGATGCTGGGAAGAGAACCCCACGGGGCGTTAGAGTTTATTGACGCCCTC
AAAAGGCAAAGGCGAGATGGGCCGCGCGACCATGCAGAAACATGTTTACG
GCGTTCGTCCTCCGCGGTGACGCTGGAAGCTCGTCCTTCGACCTCTGCCG
GCACTCCCCCGTCCCCGGCCGACGCCCGCGAAGCCGGCAGCCCTCCGGGT
TTTTTTCCGGTGCTTGCGTCACCCCCGCCGCTCAAGCCTGCAGCGTTGCG
CCCCCCCCCGGTCAGCATTACCAGCAGCACCGGCAGTCCCGGACCTTGCC
ACGAAGCCGCGCCATCCGACGGCTCCTCTTACTGCGGGCACTACATCCTC
CTCGTCGGGTGGAGTGAGGCGGACGGGGTGTTTATCGCGAGAGACCCCGC
GCTGCCTCCGCCCTCCCCCCCTGCCGGCGCCTCAACGATCGCCCTGGGCG
GCAGGGGTGACCCCGGCGCCCCCGTCTACATAACCCTCACACCGGAGGTA
TTAGACAGGGCGCGGCTCAGCTATGGCACAGATGAGGACGTTGTGGTGGT
AGATCTCGCGTGCAGCCGCAAAGGGGTCGTTACCGCCGCGCCTCTAGCGG
CAGCGGCGGCAGCGACGGCCCTGGCGGCGTCTGCCGCGAGCTCAGCAGCC
GCCGCCTCGGCTCTAGTGGGACTGTTTGCCATGGCGGCGGCCGCGGCCGC
TGCGCGTGCTGATGCGTCCGGGTTCAAGGAATGGGCGTGGCCGGACCCTG
TGGCGTGGTTCGGGGGGTACGCCCCGGGCGGGGTTGCCGGCGACGGGGGC
GTTCGCCTCAGCGGCAGCGACTCAAAGACAGGTGGTGGAGTAGGAGGTGG
GGATGGAGTAGGAGTAAGAGTTGGAGTTGCAGGAGAAGGCTTGTCGCAAG
GGGGTGTGGAATCGGCCGCCAAAAGGCTGGCCAGCCTTCTGTCACTCGCG
GCCAGCGGGTGGCGTTTCCCGACTGTCGGGGACGCTTACCGTGGCCCGCG
GGTGCCGTGGAAGACCGGGGGCTGGGGCGCCACCGGTGGCTGGGGCGCCA
CCGGTGGCGGTGGCGGAAACGACTTGGAAACGCAGGAGGAGAGGGAGCGA
TGGGATGTCCGCATGGCTAGTGCCATGGAAGGACTACTGCAGGGCGGCAG
ACGGGCCGCGTACACCATGGAAGGGTTTCTGCAAGGGGGCGCTCACACAG
TGGAAGGCTTGCTGGAGGGGGGCAGAAGGGCCGCCTACAGTTTCCGGGAT
AGCCTTGCCGATGCGGTCGACTCTCCGGGAGGGGCAGGCGCAGAGTGCTG
CGCGGCTTTGGAGCGATCGACTCTCCACGCGTGGAACCCTCCCGGATCGC
CAGTGTCGCCCAGCATCGGGGCGGTAATGTCTCCAGCGTAAGAGGCAGAG
GAGGCGAAGGTAGGGGCAGTCCAGAAATCCTTCTCGTGGAAAGAGCTGGC
GGTGCTCGTCTCCGGCTACGATTACGCCGCGATCGTTCTCGTCGACTCTC
GGTACCTCTACCCGGCCACCCACCACACCCCTGCACCGGCTCTTGCGCCC
CCGTCACCGGCGAATGCCGTGAGACTGGGTGGTGTTTCGCCAACTTGGAG
TACCCCAAAACGTCTTAACGAAGACGATGAAGGAGGCGTGTTTAGGGGTG
GGAGGGTCGGTGACGACGAGGGCGGTGCGCCGTCGAGGCGACGAAGGAGG
AGACCGAGAGCGTTGCAGGGCAACGGCAGACAACACCAAGGCGCAGAGGT
TTCCAGCGTGCGAGCAGCGGGGCCGACTCGTTTTCCGTCTGCGCGCTCTG
CGCCGAACTTGATGGCGCCACCATCGGTGTCGTCGATCGCCCCGGGAGCT
AAGCAGGCGACTCGCGGACGAGACGCGCGAGGGAACTTGCGAGTGTGTCC
CGCACCCCACTCGTTAGCGTGGGATGGAAAATTGGTGTCCCCGTTGGTGA
CGCCGCCCCTGCGTCAGACGGCGCGAAAGATGCTGGGAAGAGAACCCCAC
GGGGCGTTAGAGTTTATTGACGCCCTCAAAAGGCAAAGGCGAGATGGGCC
GCGCGACCATGCAGAAACATGTTTACGGCGTTCGTCCTCCGCGGTGACGC
TGGAAGCTCGTCCTTCGACCTCTGCCGGCACTCCCCCGTCCCCGGCCGAC
GCCCGCGAAGCCGGCAGCCCTCCGGGTTTTTTTCCGGTGCTTGCGTCACC
CCCGCCGCTCAAGCCTGCAGCGTTGCGCCCCCCCCCGGTCAGCATTACCA
GCAGCACCGGCAGTCCCGGACCTTGCCACGAAGCCGCGCCATCCGACGGC
TCCTCTTACTGCGGGCACTACATCCTCCTCGTCGGGTGGAGTGAGGCGGA
CGGGGTGTTTATCGCGAGAGACCCCGCGCTGCCTCCGCCCTCCCCCCCTG
CCGGCGCCTCAACGATCGCCCTGGGCGGCAGGGGTGACCCCGGCGCCCCC
GTCTACATAACCCTCACACCGGAGGTATTAGACAGGGCGCGGCTCAGCTA
TGGCACAGATGAGGACGTTGTGGTGGTAGATCTCGCGTGCAGCCGCAAAG
GGGTCGTTACCGCCGCGCCTCTAGCGGCAGCGGCGGCAGCGACGGCCCTG
GCGGCGTCTGCCGCGAGCTCAGCAGCCGCCGCCTCGGCTCTAGTGGGACT
GTTTGCCATGGCGGCGGCCGCGGCCGCTGCGCGTGCTGATGCGTCCGGGT
TCAAGGAATGGGCGTGGCCGGACCCTGTGGCGTGGTTCGGGGGGTACGCC
CCGGGCGGGGTTGCCGGCGACGGGGGCGTTCGCCTCAGCGGCAGCGACTC
AAAGACAGGTGGTGGAGTAGGAGGTGGGGATGGAGTAGGAGTAAGAGTTG
GAGTTGCAGGAGAAGGCTTGTCGCAAGGGGGTGTGGAATCGGCCGCCAAA
AGGCTGGCCAGCCTTCTGTCACTCGCGGCCAGCGGGTGGCGTTTCCCGAC
TGTCGGGGACGCTTACCGTGGCCCGCGGGTGCCGTGGAAGACCGGGGGCT
GGGGCGCCACCGGTGGCTGGGGCGCCACCGGTGGCGGTGGCGGAAACGAC
TTGGAAACGCAGGAGGAGAGGGAGCGATGGGATGTCCGCATGGCTAGTGC
CATGGAAGGACTACTGCAGGGCGGCAGACGGGCCGCGTACACCATGGAAG
GGTTTCTGCAAGGGGGCGCTCACACAGTGGAAGGCTTGCTGGAGGGGGGC
AGAAGGGCCGCCTACAGTTTCCGGGATAGCCTTGCCGATGCGGTCGACTC
TCCGGGAGGGGCAGGCGCAGAGTGCTGCGCGGCTTTGGAGCGATCGACTC
TCCACGCGTGGAACCCTCCCGGATCGCCAGTGTCGCCCAGCATCGGGGCG
GTAATGTCTCCAGCGTAA
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