mRNA_M-pyrifera_M_contig8426.19658.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8426.19658.1
Unique NamemRNA_M-pyrifera_M_contig8426.19658.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Match: D8LFL1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFL1_ECTSI)

HSP 1 Score: 470 bits (1209), Expect = 4.800e-160
Identity = 235/361 (65.10%), Postives = 278/361 (77.01%), Query Frame = 1
Query:  187 VDPSKFM----FGNPPELNVDYSDAMAKLHKKHVGDVDVAAVYAESLMVLKPWAMWTRDSVSG----DITPTIEGTLVAKDVLERAMEAPEGMEHPGVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQYKARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAALFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMTKWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEAEEEQAKYLASMQHPALAGRMLHNNPVMSDEEPCILKLGAAMLSGEIEYRKGNFETAFELLREAVR 1245
            VDP   M     GN PELN+ +SDAMA+L+ K+  D+DVAA+Y+ESLM L PWAMW R  V      +I P    TL+ KDVLERAME P GMEHPG+LHLYCHLMELSDDPIAAMPAA+ LR  +  AGHLTHMASHIDIWAG YKA+      +LD N ++I  D ATVE+TG+E++FYKGYRIHNVHMA WAA+FTG+ + AM+MAR   AML PGDE+SG+Q ML G IPM  +F EPY++ KWH MIRFG+WDEIIAEP+ ED  LY T + T  YARGIA AS G+V EAE+EQAKYL  M++PAL GRM+HNN ++SDE PC+ K+G AML+GEIEYRKGNFETAFE LREAVR
Sbjct:   67 VDPRCAMAFWGIGNTPELNLSFSDAMARLYDKYADDLDVAALYSESLMALNPWAMWVRKDVEATGEAEIVPVNGSTLIVKDVLERAMELPGGMEHPGILHLYCHLMELSDDPIAAMPAADTLRNNFRHAGHLTHMASHIDIWAGHYKAQA-----ALDTNFTAIAADEATVEHTGVETSFYKGYRIHNVHMAVWAAMFTGQQDVAMEMARKLSAMLSPGDENSGIQFMLQGLIPMA-IFWEPYTLVKWHAMIRFGLWDEIIAEPRDEDPALYPTSLTTAHYARGIAFASKGLVAEAEKEQAKYLEGMKNPALGGRMIHNNLIVSDEAPCLFKVGEAMLAGEIEYRKGNFETAFEHLREAVR 421          
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Match: A0A3A5W199_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Poseidoniales archaeon TaxID=2163009 RepID=A0A3A5W199_9ARCH)

HSP 1 Score: 405 bits (1042), Expect = 8.600e-136
Identity = 205/397 (51.64%), Postives = 270/397 (68.01%), Query Frame = 1
Query:   16 AYALSSNYNFEPGFGSGFDPIQAAVAKVDAEGSPYSELERDLIHAMTTRSSAESKAAVDPSKFMFGNPPELNVDYSDAMAKLHKKHVGDVDVAAVYAESLMVLKPWAMWTRDSVSGDITPTIEGTLVAKDVLERAMEAPEGME-HPGVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQYKARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAALFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMTKWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEAEEEQAKYLASMQHPALAGRMLHNNPVMSD--EEPCILKLGAAMLSGEIEYR 1197
            AY +SSNYN+ PG GSG D IQ AV+  D      +ELE+DLI A+ TR SAE++ A DPS    GN PELNV +++AMA L++K+ G++DV ++Y E+LM LK W +W +++ +G+ITP  + TL+   ++E A EA E  + HP + HLYCH +ELS  P  A+PAA+ LR L P  GHL HM SHID W GQ+K  +       + N+++++ D+  VE TG ES FYK YR+HN H   W A+F G+ E A+K AR     LP GDE+SGVQ ML G IPMG +FLE Y    WHVMIRFG WDEI+AEP Y+D +++   +AT  YARG+A AS GMVPEAE EQ  +  ++++PALAGR+LHNN +  D  E PCIL + AA+L GEIEYR
Sbjct:   70 AYCVSSNYNWAPGLGSGHDSIQTAVSLKDG----CTELEKDLIDALATRHSAEARDAADPSVLNMGNSPELNVAFAEAMAPLYEKYSGNLDVTSIYVEALMNLKAWQLWDKNTATGEITPADDNTLLLVKIMEDAFEASEEAKVHPALCHLYCHALELSPFPEKALPAADVLRNLMPGLGHLVHMPSHIDAWVGQWKEAV-------ECNIAAVEADDRYVELTGNESQFYKFYRMHNHHFIVWCAMFEGQYETALKYARKAVDTLPAGDENSGVQFMLAGIIPMGAIFLESYVTMPWHVMIRFGKWDEILAEPMYDDKDVFPATIATQHYARGVAYASKGMVPEAEAEQVLFNEALKNPALAGRVLHNNLMYQDPSEGPCILLVNAAVLEGEIEYR 455          
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Match: A0A2E2I742_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E2I742_9EURY)

HSP 1 Score: 409 bits (1050), Expect = 3.310e-135
Identity = 212/422 (50.24%), Postives = 278/422 (65.88%), Query Frame = 1
Query:   16 AYALSSNYNFEPGFGSGFDPIQAAVAKVDAEGSPYSELERDLIHAMTTRSSAESKAAVDPSKFMFGNPPELNVDYSDAMAKLHKKHVGDVDVAAVYAESLMVLKPWAMWTRDSVSGDITPTIEGTLVAKDVLERAMEAPEGME-HPGVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQYKARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAALFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMTKWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEAEEEQAKYLASMQHPALAGRMLHNNPVMSD--EEPCILKLGAAMLSGEIEYRK----------GNFETAFELLREAV 1242
            AY +SSNYN+ PG GSG D IQ AV+  D      +E+E+DLI A+  R SAE++ A DP+    GN PELNV +++AMA L++K+ G++DV A+Y E+LM LK W +W +++ +G+ITP  E TL+   ++E A E+ E  + HP + HLYCH +ELS  P  A+PAA+ LRTL P  GHL HM SHID W GQ+K  +       D N++++  D+  VE TG ES FYK YR+HN H   W A+F G+ E AMK AR     LP GDE+SGVQ ML G IPMG +FLE Y    WHVMIRFG WDEI+ EP Y D +++   +AT  YARG+A AS GMVPEAE EQ  + A++++PALAGR+LHNN +  D  + PCIL + AA+L+GEIEYR+           NF  AF+ LR  V
Sbjct:   70 AYCVSSNYNWAPGLGSGHDAIQQAVSLKDG----CTEMEKDLIDALAQRHSAEARDAADPTVLNMGNSPELNVAFAEAMAPLYEKYAGNLDVTAIYVEALMNLKAWQLWDKNTATGEITPADENTLLLVKIMEDAFESSEEAKVHPALCHLYCHALELSPFPEKALPAADVLRTLMPGLGHLVHMPSHIDAWVGQWKEAV-------DCNIAAVVADDKYVELTGNESQFYKFYRMHNHHFIVWCAMFEGQYEVAMKYARKAVDTLPAGDENSGVQFMLAGIIPMGAIFLESYVTMPWHVMIRFGKWDEILNEPMYSDKDVFPAVIATQHYARGVAYASKGMVPEAEAEQVLFEAALENPALAGRVLHNNLMYQDPADGPCILLVNAAVLAGEIEYRRQFLAKQRGEASNFTVAFDHLRRGV 480          
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Match: A0A7J4RJD6_9ARCH (Uncharacterized protein (Fragment) n=2 Tax=Candidatus Poseidoniales TaxID=133814 RepID=A0A7J4RJD6_9ARCH)

HSP 1 Score: 402 bits (1034), Expect = 1.180e-134
Identity = 204/398 (51.26%), Postives = 269/398 (67.59%), Query Frame = 1
Query:   16 AYALSSNYNFEPGFGSGFDPIQAAVAKVDAEGSPYSELERDLIHAMTTRSSAESKAAVDPSKFMFGNPPELNVDYSDAMAKLHKKHVGDVDVAAVYAESLMVLKPWAMWTRDSVSGDITPTIEGTLVAKDVLERAME-APEGMEHPGVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQYKARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAALFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMTKWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEAEEEQAKYLASMQHPALAGRMLHNNPVMSD--EEPCILKLGAAMLSGEIEYRK 1200
            AY +SSNYN+ PG GSG DPIQ A++  D      SELE+DLI A++ R S E++ A DPS    GN PELNV +++AMA L++K+ GD+DV A+Y E+LM LK W +W +D+ SG+I+P  + TL+  ++LE+A E + E   HP + HLYCH +ELS  P  A+PAA+ LR L P  GHL HM SHID W GQ+K  I       D N+++++ D+  VE TG ES FYK YR+HN H   W A+F G+ E A+K AR   + LP GDE+SGVQ ML G IPMG +FLE Y    WHVMIRFG WDEI+ EP Y D +++   +AT  YARG+A AS GMVPEAE EQA ++ ++ +PAL GR++HNN +  D  E P IL + A++L  EIEYR+
Sbjct:   47 AYCVSSNYNWTPGLGSGHDPIQKAMSLKDN----CSELEQDLIVALSKRHSEEARDAADPSVLNMGNSPELNVAFAEAMAPLYEKYEGDLDVTAIYVEALMNLKAWQLWDKDTKSGEISPADDNTLLLVEILEQAFENSEEANTHPALCHLYCHALELSPFPERALPAADVLRNLMPGLGHLVHMPSHIDAWVGQWKEAI-------DCNIAAVEADDRYVEITGNESQFYKFYRMHNHHFVVWCAMFDGQYETALKYARKAVSTLPAGDENSGVQFMLAGIIPMGAIFLESYVTMPWHVMIRFGKWDEILEEPMYSDKDVFPATIATQHYARGVAYASKGMVPEAEAEQALFVEALSNPALEGRVMHNNFMYQDPSEGPSILNVNASILEAEIEYRR 433          
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Match: A0A2E0VAD4_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E0VAD4_9EURY)

HSP 1 Score: 406 bits (1043), Expect = 3.750e-134
Identity = 213/422 (50.47%), Postives = 274/422 (64.93%), Query Frame = 1
Query:   16 AYALSSNYNFEPGFGSGFDPIQAAVAKVDAEGSPYSELERDLIHAMTTRSSAESKAAVDPSKFMFGNPPELNVDYSDAMAKLHKKHVGDVDVAAVYAESLMVLKPWAMWTRDSVSGDITPTIEGTLVAKDVLERAMEAPEGM-EHPGVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQYKARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAALFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMTKWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEAEEEQAKYLASMQHPALAGRMLHNNPVMSD--EEPCILKLGAAMLSGEIEYRK----------GNFETAFELLREAV 1242
            AY +SSNYN+ PG GSG D IQ A+   +      SELE+DLI A+  R SAE++ A DPS    GN PELNV +++AMA L+KK+ G++DV AVY E+LM LK W +W +++ +G+ITP  + TL+   V+E A E  EG  EH  + HLYCH +ELS  P  A+PAA+ LRT  P  GHL HM SHID W GQ+K  +       + N++++  D+  VE TG ES FYK YR+HN H   W A+F G+ E A+K AR   A LP GDE+ GV  ML G IPMG +FLE Y    WHVMIRFG WDEI++EP Y D +++   +AT  YARG+A AS GMVPEAE EQ  +  ++++PALAGR+LHNN +  D  E PCIL + AA+L GEIEYRK           +F TAF+ LR  V
Sbjct:   70 AYCVSSNYNWSPGLGSGHDYIQTAITLKEG----CSELEKDLIDALAQRHSAEARDAADPSVLNMGNSPELNVAFANAMAPLYKKYRGNLDVTAVYVEALMNLKAWQLWDKNTTTGEITPADDNTLLLVKVMEEAFETVEGAKEHIALCHLYCHALELSPFPERALPAADVLRTAMPGLGHLVHMPSHIDAWVGQWKEAV-------ECNIAAVKADDRYVELTGNESQFYKFYRMHNHHFIVWCAMFEGQYEIALKYARKAVATLPAGDENHGVNFMLAGIIPMGAIFLESYVTMPWHVMIRFGKWDEILSEPMYSDKDVFPATIATQHYARGVAYASKGMVPEAEAEQILFNQALENPALAGRVLHNNLMYQDPSEGPCILLVNAAVLDGEIEYRKQFLAKARGESADFSTAFDHLRRGV 480          
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Match: A0A1Z9U050_9EURY (Uncharacterized protein n=14 Tax=cellular organisms TaxID=131567 RepID=A0A1Z9U050_9EURY)

HSP 1 Score: 405 bits (1040), Expect = 1.030e-133
Identity = 211/422 (50.00%), Postives = 275/422 (65.17%), Query Frame = 1
Query:   16 AYALSSNYNFEPGFGSGFDPIQAAVAKVDAEGSPYSELERDLIHAMTTRSSAESKAAVDPSKFMFGNPPELNVDYSDAMAKLHKKHVGDVDVAAVYAESLMVLKPWAMWTRDSVSGDITPTIEGTLVAKDVLERAMEAP-EGMEHPGVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQYKARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAALFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMTKWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEAEEEQAKYLASMQHPALAGRMLHNNPVMSD--EEPCILKLGAAMLSGEIEYRK----------GNFETAFELLREAV 1242
            AY LSSNYN+ PG GSG DPIQ A++  D      +ELE+DLI+A+  R S E++ A DPS    GN PELN+ ++DAMA L++K+ G++DV A+Y E+LM LK W +W +++ +G+ITP  + TL+   VLE A E+  E   HP + HLYCH +ELS  P  A+PAA+ LRT  P  GHL HM SHID W GQ+K  I       D N+++++ D+  VE TG ES FYK YR+HN H   W A+F G+ E A+K AR     LP GD +SGVQ ML G IPMG +FLE Y    WHVMIRFG W+EI+ EP + D +++   +AT  YARG+A ASMGMVPEAE EQ  +  ++Q+PALAGR+LHNN +  D  E PCIL +  A+L GEIEYR+           +F  AF+ LR  V
Sbjct:   70 AYCLSSNYNWSPGLGSGHDPIQQAMSLKDK----CTELEQDLINALAERHSEEARDAADPSVLNMGNSPELNIAFADAMAPLYEKYKGNLDVTAIYVEALMNLKAWQLWDKNTKTGEITPADDNTLLLVKVLEDAFESSDEAKVHPAICHLYCHALELSPFPERALPAADVLRTRMPGLGHLVHMPSHIDAWVGQWKEAI-------DCNIAAVEADDRYVEITGNESQFYKFYRMHNHHFVVWCAMFDGQYETALKYARKAVETLPAGDANSGVQFMLAGVIPMGAIFLESYVTMPWHVMIRFGKWNEILNEPLHTDRDVFPAAIATQHYARGVAYASMGMVPEAEAEQVLFKEALQNPALAGRVLHNNLMYQDPSEGPCILLVNDAILDGEIEYRRQYLAKEKGLDADFTVAFDHLRRGV 480          
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Match: A0A2E6KYC3_9EURY (Uncharacterized protein n=7 Tax=Archaea TaxID=2157 RepID=A0A2E6KYC3_9EURY)

HSP 1 Score: 405 bits (1040), Expect = 1.350e-133
Identity = 209/422 (49.53%), Postives = 273/422 (64.69%), Query Frame = 1
Query:   16 AYALSSNYNFEPGFGSGFDPIQAAVAKVDAEGSPYSELERDLIHAMTTRSSAESKAAVDPSKFMFGNPPELNVDYSDAMAKLHKKHVGDVDVAAVYAESLMVLKPWAMWTRDSVSGDITPTIEGTLVAKDVLERAME-APEGMEHPGVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQYKARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAALFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMTKWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEAEEEQAKYLASMQHPALAGRMLHNNPVMSD--EEPCILKLGAAMLSGEIEYRKG----------NFETAFELLREAV 1242
            AY +SSNYN+ PG G G+D IQ AV+  D      +ELE+DLI A++TR S E++   +P+    GN PELN  ++DAMA L++K+ G++DVAA+Y E+LM L PW +W +D+ SG+ITP  + TL+   ++E A +  P   EHP + HLYCH +ELS  P  A+PAA+ LRTL P  GHL HM SHID W GQ+K  I       D N+++++ D+  VE TG ES FYK YR+HN H   W A+F G+ E A+K AR     LP GD + G Q ML G IPMG +FLE Y    WHVMIRFG WDEI+AEP Y D +++   +AT  YARG+A AS GMVPEAE EQA +  ++Q+PALAGRM+HNN +  D  E P IL + AA+L  EIEYR+           +F  AF+ LR  V
Sbjct:   78 AYCVSSNYNWSPGLGPGYDAIQQAVSLKDG----CTELEQDLIMALSTRHSKEARDNANPAALNMGNSPELNQAFADAMAPLYEKYAGNLDVAAIYVEALMNLNPWTLWNKDAASGEITPVDDSTLLLIKIMEDAFDNVPGAKEHPALCHLYCHALELSPYPEKALPAADVLRTLMPGCGHLVHMPSHIDAWVGQWKEAI-------DCNIAAVEADDKYVELTGNESQFYKFYRMHNHHFVVWCAMFDGQYETALKYARKAVDTLPAGDANHGAQFMLAGIIPMGAIFLESYVTMPWHVMIRFGKWDEILAEPMYSDRDVFPATIATQHYARGVAYASKGMVPEAEAEQALFQEALQNPALAGRMMHNNFMYQDPAEGPSILNVNAAILEAEIEYRRQFLAKAAGEPHDFTAAFDELRRGV 488          
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Match: A0A2D6JR42_9ARCH (Uncharacterized protein n=15 Tax=Archaea TaxID=2157 RepID=A0A2D6JR42_9ARCH)

HSP 1 Score: 404 bits (1039), Expect = 1.500e-133
Identity = 210/422 (49.76%), Postives = 277/422 (65.64%), Query Frame = 1
Query:   16 AYALSSNYNFEPGFGSGFDPIQAAVAKVDAEGSPYSELERDLIHAMTTRSSAESKAAVDPSKFMFGNPPELNVDYSDAMAKLHKKHVGDVDVAAVYAESLMVLKPWAMWTRDSVSGDITPTIEGTLVAKDVLERAMEAPEGME-HPGVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQYKARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAALFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMTKWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEAEEEQAKYLASMQHPALAGRMLHNNPVMSD--EEPCILKLGAAMLSGEIEYRKG----------NFETAFELLREAV 1242
            AY +SSNYN+ PG GSG D IQ AV+  D      +ELE+DLI A+  R SAE++ A DP+    GN PELNV +++AMA L++K+ G++DV A+Y E+LM LK W +W +++ +G+ITP  + TL+   V+E A E+ E  + HP + HLYCH +ELS  P  A+PAA+ LR L P  GHL HM SHID W GQ+K  +       + N+++++ D+  VE TG ES FYK YR+HN H   W A+F G+ E A+K AR     LP GD +SGVQ ML G IPMG +FLE Y    WHVMIRFG WDEI+AEP Y D E++   +AT  YARG+A AS GMVPEAE EQA +  ++++PALAGR+LHNN +  D  E PCIL + AA+L GEIEYR+           +F  AF+ +R  V
Sbjct:   70 AYCVSSNYNWSPGLGSGHDSIQQAVSLKDG----CTELEKDLIDALAQRHSAEARDAADPTVLNMGNSPELNVAFAEAMAPLYEKYRGNLDVTAIYVEALMNLKAWQLWDKNTATGEITPADDNTLLLVKVMEDAFESSEEAKVHPALCHLYCHALELSPFPEKALPAADVLRNLMPGLGHLVHMPSHIDAWVGQWKEAV-------ECNIAAVEADDRYVELTGNESQFYKFYRMHNHHFIVWCAMFEGQYETALKYARKAVDTLPAGDMNSGVQFMLAGIIPMGAIFLESYVTMPWHVMIRFGKWDEILAEPMYSDKEVFPATIATQHYARGVAYASKGMVPEAEAEQALFYEALENPALAGRVLHNNLMYQDPSEGPCILLVNAAVLDGEIEYRRQYLAKENGDSYDFTEAFDHIRRGV 480          
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Match: A0A3A5VEU8_9ARCH (Uncharacterized protein n=3 Tax=Archaea TaxID=2157 RepID=A0A3A5VEU8_9ARCH)

HSP 1 Score: 404 bits (1039), Expect = 1.500e-133
Identity = 211/422 (50.00%), Postives = 276/422 (65.40%), Query Frame = 1
Query:   16 AYALSSNYNFEPGFGSGFDPIQAAVAKVDAEGSPYSELERDLIHAMTTRSSAESKAAVDPSKFMFGNPPELNVDYSDAMAKLHKKHVGDVDVAAVYAESLMVLKPWAMWTRDSVSGDITPTIEGTLVAKDVLERAMEAPEGME-HPGVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQYKARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAALFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMTKWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEAEEEQAKYLASMQHPALAGRMLHNNPVMSD--EEPCILKLGAAMLSGEIEYRKG----------NFETAFELLREAV 1242
            AY +SSNYN+ PG GSG D IQ AV+  D      SELE+DLI A+  R SAE++ A DPS    GN PELNV +++AMA L++K+ G++DV A+Y E+LM LK W +W +D+ +G+ITP  + TL+   ++E A E+ E  + HP + HLYCH +ELS  P  A+PAA+ LRT  P  GHL HM SHID W GQ+K  I       + N+++++ D+  VE TG ES FYK YR+HN H   W A+F G+ E A+K AR     LP GDE+SGVQ ML G IPMG +FLE Y    WHVM+RFG WDEI+ EP Y+D +++   +AT  YARG+A AS GMVPEAE EQA +  ++Q+PALAGRM+HNN +  D  E P IL + AA+L  EIEYR+           +F  AF+ LR  V
Sbjct:   70 AYCVSSNYNWAPGLGSGHDAIQQAVSLKDG----CSELEKDLIDALAQRHSAEARDAADPSVLNMGNSPELNVAFAEAMAPLYEKYSGNLDVTAIYVEALMNLKAWQLWDKDTKTGEITPADDNTLLLVKIMEDAFESSEEAKVHPALCHLYCHALELSPFPEKALPAADVLRTRMPGLGHLVHMPSHIDAWVGQWKEAI-------ECNIAAVEADDRYVELTGNESQFYKFYRMHNHHFVVWCAMFEGQYETALKYARKAVDTLPAGDENSGVQFMLAGIIPMGAIFLESYVTMPWHVMVRFGKWDEILNEPMYDDKDVFPATIATQHYARGVAYASKGMVPEAEAEQALFKQALQNPALAGRMMHNNFMYQDPAEGPSILNVNAAILEAEIEYRRQFLAKAAGEDHDFTAAFDELRRGV 480          
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Match: A0A2E9KM34_9EURY (Uncharacterized protein n=6 Tax=Archaea TaxID=2157 RepID=A0A2E9KM34_9EURY)

HSP 1 Score: 403 bits (1036), Expect = 4.120e-133
Identity = 210/422 (49.76%), Postives = 276/422 (65.40%), Query Frame = 1
Query:   16 AYALSSNYNFEPGFGSGFDPIQAAVAKVDAEGSPYSELERDLIHAMTTRSSAESKAAVDPSKFMFGNPPELNVDYSDAMAKLHKKHVGDVDVAAVYAESLMVLKPWAMWTRDSVSGDITPTIEGTLVAKDVLERAME-APEGMEHPGVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQYKARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAALFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMTKWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEAEEEQAKYLASMQHPALAGRMLHNNPVMSD--EEPCILKLGAAMLSGEIEYRKG----------NFETAFELLREAV 1242
            AY +SSNYN+ PG GSG DPIQ A++  D      SELE+DLI A++ R S E++ A DPS    GN PELNV +++AMA L++K+ GD+DV A+Y E+LM LK W +W +D+ SG+I+P  + TL+  ++LE+A E + E   HP + HLYCH +ELS  P  A+PAA+ LR L P  GHL HM SHID W GQ+K  I       D N+++++ D+  VE TG ES FYK YR+HN H   W A+F G+ E A+K AR   + LP GDE+SGVQ ML G IPMG +FLE Y    WHVMIRFG WDEI+ EP Y D +++   +AT  YARG+A AS GMVPEAE EQA +  ++ +PAL GR++HNN +  D  E P IL + A++L  EIEYR+           +F  AF+ LR  V
Sbjct:   70 AYCVSSNYNWTPGLGSGHDPIQKAMSLKDN----CSELEQDLIVALSKRHSEEARDAADPSVLNMGNSPELNVAFAEAMAPLYEKYEGDLDVTAIYVEALMNLKAWQLWDKDTKSGEISPADDNTLLLVEILEQAFENSEEAKTHPALCHLYCHALELSPFPERALPAADVLRDLMPGLGHLVHMPSHIDAWVGQWKEAI-------DCNIAAVEADDRYVEITGNESQFYKFYRMHNHHFVVWCAMFDGQYETALKYARKAVSTLPAGDENSGVQFMLAGIIPMGAIFLESYVTMPWHVMIRFGKWDEILEEPMYSDKDVFPATIATQHYARGVAYASKGMVPEAEAEQALFEEALSNPALEGRVMHNNFMYQDPSEGPSILNVNASILEAEIEYRRQFLAKANGESFDFSKAFDELRRGV 480          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8426.19658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFL1_ECTSI4.800e-16065.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A3A5W199_9ARCH8.600e-13651.64Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
A0A2E2I742_9EURY3.310e-13550.24Uncharacterized protein n=1 Tax=Euryarchaeota arch... [more]
A0A7J4RJD6_9ARCH1.180e-13451.26Uncharacterized protein (Fragment) n=2 Tax=Candida... [more]
A0A2E0VAD4_9EURY3.750e-13450.47Uncharacterized protein n=1 Tax=Euryarchaeota arch... [more]
A0A1Z9U050_9EURY1.030e-13350.00Uncharacterized protein n=14 Tax=cellular organism... [more]
A0A2E6KYC3_9EURY1.350e-13349.53Uncharacterized protein n=7 Tax=Archaea TaxID=2157... [more]
A0A2D6JR42_9ARCH1.500e-13349.76Uncharacterized protein n=15 Tax=Archaea TaxID=215... [more]
A0A3A5VEU8_9ARCH1.500e-13350.00Uncharacterized protein n=3 Tax=Archaea TaxID=2157... [more]
A0A2E9KM34_9EURY4.120e-13349.76Uncharacterized protein n=6 Tax=Archaea TaxID=2157... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8426contigM-pyrifera_M_contig8426:2637..11490 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score474.6
Seed ortholog evalue4.9e-131
Seed eggNOG ortholog2880.D8LFL1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tpr domain protein
EggNOG OGs28MP5@1,2QU74@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-04_001810.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons11
Model size1245
Cds size1245
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816750.1466181-CDS-M-pyrifera_M_contig8426:2636..28471622816750.1466181-CDS-M-pyrifera_M_contig8426:2636..2847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 2637..2847 +
1692278156.023584-CDS-M-pyrifera_M_contig8426:2636..28471692278156.023584-CDS-M-pyrifera_M_contig8426:2636..2847Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 2637..2847 +
1622816750.158241-CDS-M-pyrifera_M_contig8426:3225..32581622816750.158241-CDS-M-pyrifera_M_contig8426:3225..3258Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 3226..3258 +
1692278156.0404904-CDS-M-pyrifera_M_contig8426:3225..32581692278156.0404904-CDS-M-pyrifera_M_contig8426:3225..3258Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 3226..3258 +
1622816750.17235-CDS-M-pyrifera_M_contig8426:3716..38891622816750.17235-CDS-M-pyrifera_M_contig8426:3716..3889Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 3717..3889 +
1692278156.0579143-CDS-M-pyrifera_M_contig8426:3716..38891692278156.0579143-CDS-M-pyrifera_M_contig8426:3716..3889Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 3717..3889 +
1622816750.1850252-CDS-M-pyrifera_M_contig8426:4438..46491622816750.1850252-CDS-M-pyrifera_M_contig8426:4438..4649Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 4439..4649 +
1692278156.0743198-CDS-M-pyrifera_M_contig8426:4438..46491692278156.0743198-CDS-M-pyrifera_M_contig8426:4438..4649Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 4439..4649 +
1622816750.2352092-CDS-M-pyrifera_M_contig8426:5158..52161622816750.2352092-CDS-M-pyrifera_M_contig8426:5158..5216Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 5159..5216 +
1692278156.0895777-CDS-M-pyrifera_M_contig8426:5158..52161692278156.0895777-CDS-M-pyrifera_M_contig8426:5158..5216Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 5159..5216 +
1622816750.2483726-CDS-M-pyrifera_M_contig8426:6132..61931622816750.2483726-CDS-M-pyrifera_M_contig8426:6132..6193Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 6133..6193 +
1692278156.1140978-CDS-M-pyrifera_M_contig8426:6132..61931692278156.1140978-CDS-M-pyrifera_M_contig8426:6132..6193Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 6133..6193 +
1622816750.2618449-CDS-M-pyrifera_M_contig8426:6961..70441622816750.2618449-CDS-M-pyrifera_M_contig8426:6961..7044Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 6962..7044 +
1692278156.1299326-CDS-M-pyrifera_M_contig8426:6961..70441692278156.1299326-CDS-M-pyrifera_M_contig8426:6961..7044Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 6962..7044 +
1622816750.272611-CDS-M-pyrifera_M_contig8426:8153..82431622816750.272611-CDS-M-pyrifera_M_contig8426:8153..8243Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 8154..8243 +
1692278156.1446786-CDS-M-pyrifera_M_contig8426:8153..82431692278156.1446786-CDS-M-pyrifera_M_contig8426:8153..8243Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 8154..8243 +
1622816750.2830124-CDS-M-pyrifera_M_contig8426:9033..91751622816750.2830124-CDS-M-pyrifera_M_contig8426:9033..9175Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 9034..9175 +
1692278156.158559-CDS-M-pyrifera_M_contig8426:9033..91751692278156.158559-CDS-M-pyrifera_M_contig8426:9033..9175Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 9034..9175 +
1622816750.2943847-CDS-M-pyrifera_M_contig8426:10605..106631622816750.2943847-CDS-M-pyrifera_M_contig8426:10605..10663Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 10606..10663 +
1692278156.1697598-CDS-M-pyrifera_M_contig8426:10605..106631692278156.1697598-CDS-M-pyrifera_M_contig8426:10605..10663Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 10606..10663 +
1622816750.3067868-CDS-M-pyrifera_M_contig8426:11365..114901622816750.3067868-CDS-M-pyrifera_M_contig8426:11365..11490Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 11366..11490 +
1692278156.1803987-CDS-M-pyrifera_M_contig8426:11365..114901692278156.1803987-CDS-M-pyrifera_M_contig8426:11365..11490Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8426 11366..11490 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8426.19658.1prot_M-pyrifera_M_contig8426.19658.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8426 2637..11490 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8426.19658.1

>prot_M-pyrifera_M_contig8426.19658.1 ID=prot_M-pyrifera_M_contig8426.19658.1|Name=mRNA_M-pyrifera_M_contig8426.19658.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=415bp
SFGAAAYALSSNYNFEPGFGSGFDPIQAAVAKVDAEGSPYSELERDLIHA
MTTRSSAESKAAVDPSKFMFGNPPELNVDYSDAMAKLHKKHVGDVDVAAV
YAESLMVLKPWAMWTRDSVSGDITPTIEGTLVAKDVLERAMEAPEGMEHP
GVLHLYCHLMELSDDPIAAMPAANALRTLYPSAGHLTHMASHIDIWAGQY
KARILTTYISLDINLSSIDTDNATVEYTGMESNFYKGYRIHNVHMAAWAA
LFTGRAEDAMKMARVTEAMLPPGDEHSGVQHMLGGNIPMGKLFLEPYSMT
KWHVMIRFGMWDEIIAEPQYEDCELYATGVATGFYARGIALASMGMVPEA
EEEQAKYLASMQHPALAGRMLHNNPVMSDEEPCILKLGAAMLSGEIEYRK
GNFETAFELLREAVR
back to top

mRNA from alignment at M-pyrifera_M_contig8426:2637..11490+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8426.19658.1 ID=mRNA_M-pyrifera_M_contig8426.19658.1|Name=mRNA_M-pyrifera_M_contig8426.19658.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8854bp|location=Sequence derived from alignment at M-pyrifera_M_contig8426:2637..11490+ (Macrocystis pyrifera P11B4 male)
TCTTTTGGCGCTGCAGCGTATGCCTTGAGTAGCAACTACAACTTCGAGCC GGGGTTCGGCAGCGGATTCGATCCCATCCAAGCGGCCGTGGCGAAGGTCG ACGCAGAAGGCTCCCCCTACTCGGAGCTGGAGAGGGACCTGATCCACGCG ATGACAACGCGCTCCTCCGCCGAGAGCAAGGCCGCGGTAGACCCTTCTAA GTTTATGTTCGGTGAGTTGAAACGTGGGTTGTGTGTTGGGGTATCGCTCA TGGGCTGAGGCTCCTCGTGTAAGAATATCTACACCTCACCCAACAATATC AGTTTCGTGCACAAAAGGAGTTGGACTTCGGTCATAGGTTTATTTCTATG ATGTGGGTTTTCCCTTCGTTTCCTCATTTCGGGGGATACTTGCTTTCAAG GTGATCAACGTTGAAGCCCATTCTGGAACATTGTCGGATGGCGAACGCAA GAATCGTATGCTGGTCTAACCCCTTCACGTCAAGTTTTACTTCCGTTCGT CCTCTGTCCACTGATTAACGCATGCTTCCCCGCGTTGTTGGGACTGCTGC TGCTGTACGCGTTCTGCTTCGTCGCCGGGACTATTGAAGGCAACCCACCG GAGCTAAACGTTGATTATTCCGGTGAGTGGCGAGACGACCCCAACAGACG TATGTACTTCGCATATATGTCGTGGGAGAGGACGAGTCAGACAAGTATGT AATATTCACTGTCTACTACATCTGGTTGAAAGGCTCGAGGCCTTTGCTAC GAACGAAACGCTTGATGCACACTAGATGGCTTGCCTAACTCTGCCGCAGA GGCCGTTTGCTGCTAAACAAAATCAACGTGTGATAGAAGAGGGTTGCGTG TTCATCTGTTCATGCCGCGAACAGAGCTGCGGCCGTATGTGAACAGTAGC GATCAGTAGAGGTACCGGTTCTTGTCCTCAAGAAGAGTGAGGTTCTTGAC GTATACTGCAGGCTGGTGGCTCTTGCGGATGCGAGGGTATAGCTCCCCCC CCTCCAAAACAGAGCCTGTCGTCCACAATTAAGCTCGTTCCTATTAAACC GTGCCGTCCGTCGCGGCTCTCTTCGCGCAGATGCAATGGCCAAGCTGCAC AAAAAGCATGTGGGCGACGTCGACGTCGCAGCGGTGTACGCGGAATCCCT GATGGTCCTGAAGCCGTGGGCGATGTGGACGAGGGATTCCGTGTCCGGCG ACATAACTCCCACGATCGAGGGCACTCTTGTCGCCAAGGACGTCTTGGAG CGGGTGCGTTTTATTTTCTGCCCCTTCCTATATAGACGCATTTTAACACA CGATATACGTGTTACGTATTCGAAAAATAGGTTACATCACGGGGGCTTAT TGGAATATGGACATTGAGGTCCACATTTTGTTCACGGTCAACAAAACGGC CAGCGCACCTAAATTAGCGGTGCCGTCGCCAACACAGCCATCACTCCGAA CAGGTGACCTTGGCCTTTCCCGCCCCCCTTCACAATTTCGCCGTGAAATC AACCTGTGGAGACTTCTGAATAACGTAGGAAACCCCACAAGGGGTCAACC GCTTCTCGGTTCGACACGCCTAATGGTGTGCTACATCGTTCAATGTTTCC ACAGTGTGGATTTTCAATGCCCACATTGTGCGGGGGGGGAGGATGGGGTC CCGGCGACTTGTGTAGGGGTGCGCCGAACTGTTCGTGCGGATACTGCCCA GTTGAGGAACGCTCTTCCCTCATAAGTGTAGCCCCCATCCACCCGTAGCA CGGTGCCACGGTATATGTTCTCATTGCCTTTTCTTGCTGTCCTTGCATGC AGGCCATGGAGGCCCCTGAAGGGATGGAGCACCCAGGCGTCCTCCACCTG TACTGCCATCTCATGGAGCTCTCGGACGACCCCATCGCGGCAATGCCGGC TGCAAACGCCTTGAGGACTCTGTACCCCTCCGCGGGCCACTTGACCCATA TGGCTTCGCACATCGACATCTGGGCTGGACAGTACAAGGCAAGGATACTA ACAACATATATATGTTGGTCTACACTACCTCGTTGTTTATTTATGTGTTA ATAACCACGCAATGAATTGAAGCTCAGTTTCGCACATTGGCATCTGGGCC TGACAGTACACGGCAAGAACCTGATAACAATATGTTGGTCTAGCCTTGAT TGAATTTGCCTCACGGTGTAGGCGTGCATCAGGGTGCGGTGATGGCTTGG CCGGACCCCGCATATGGATCAAATATCACCTTGGGGCACCTGGACATGAG GATATCAAGACATCTACGTAGCCATCAGGGACATCGCGATACTTTTCTAT GCTTGATTGCGCGTTTGGAGCTTCCTTTGCATGTGCTGGGAAAACCCAAC ACAATGCACCGCGATGTCGACGACGTTCCGGTCCAGCCTCCTGAAGGCCC ATCGTGGACATTTATATATTGTTTTACCCCTGCGGGCGGATTTTACAGTA AGTGTTTATCCTTTCGACCCTGCGTTCCGTGCTCATGCTGCCGCCGTTTT AAATCCTTGTGTTTACAGGAAGCGCTGGATATCAACTTGTCGTCTATCGA CACGGATAATGCTACTGTCGAGTATACAGGGTGAGTGGCACCAGTCAGCA GCATGTGGCGTCGGGAGCCCATTCTCTGGTATAAGTTCTTACTCGAACCG TAACATCTAGCCGACGTAGAGACTTGGAAGCATTGCAGACTACAGTGCGA CACACGCAAATCACTCCGTTTCTCTCTGTGTTGATCTGAGTCCACCTACG GAGCCAGGTGCGCGGCGATGCTGGCTCCGCGCTCGTTCTCAGTACAGTTT TACGTATGAATAGACTATTACGGGGGTCCATAGTTAATAGGACTTATGGT ATACACAAAAAACTATATGTTTACCTATTTTTACTAATAAAATTTGGTCC CGTAGACTATGGACCCCCGTAGTACTACTGTACTACTGTTTTACAGAAAC AGCAACATGTTGTATGTTTGAGATCTTCACCACCTGAACACTGCAATGCG ATCGCCGACGGTACCGGGGTTTTCTAATACGCAGATAGACCCGCCGCACG TTCCACACAAAAGCCTATTGTTGCGCTTCATCCCCAATACGTACGATGTA CGAACTTCGCTGTCTGAGATGGACCATTGAGAAAAGGAACGGTTGCACAC TATCCATATTGTATTTCCCCCACGATGGGAGTACGCACTGCTTCCTCTCT GACCTACAGAGTGCGTTAGGGTTTTATTGTTTCTGCCATGGATATCTCTG ACCGTGCCATGTGCTGCGGATGACGGTAGAATGGAAAGTAGATTCTGGCG TGCGGTGTGTCCTTCGCTGTTGCTGCTGCTGCTGCTGCTGTTGATATCGT CGTTGGCACTCTCTCTTGTTGTGGAATGCGATGCGGGTGACGCTATAATG GAATTCATCCTCTGACGTGCGGTGTGTGCTGCGCTGCTGTTGCCGTCGTT GCCGTTTCTCTCCCTGGTTTCCCCATGCGATGCGGGTGATGGTCAGAATG GAAAGTAATTTTTACAAGGGCTACCGCATTCACAACGTTCACATGGCTGC ATGGGCGGTAAGCTATACACTGTAACAAAAACTTGTCACACATGTCGAAC CGATCCCCACTGCATCACCTAGTTATTTGCCGGTAAATCAGTTCCTTATC TGTAGTGCCCAGCTCACGCGGGTGGAGGCGTTATGGTCAGCATGATCTAT TTCGGGGGACCATAGTAAATAGGACCAAGTATTGTTGGTAAAATTGGTAA ATATATAGGTTTTTATGTATACAATAGGTCCTATTTACTATGGACCCCCG TAATAGCGCTTGTTCCCTGGGTTGGATATGTACTATACAGACCCTGCACA TGATCTCGAAACAGTAGATGATCTACAGTAGATTCTATTTTGTCTGATAT GTCGTAACTATTCACACAACAAACCTCAGCGGTGAGCAGTCAAAGATGCG CGTTTATTTGCAACCGCTGCAGTGTGCGCAGGCCGCGCGCACTGTCTACA TACATTCTTCGTGAACGATATACGTGTGTAGCTCGGTGACCCGCGCAGAT GCTACCACGGGGTCTAGAGCACGTTTGTTCAAACACGGCAGAATATTGTC ACATTGACGCTGCTTGACAGTACCTGGGTCCTAAAACCAACTACCACTCT GACTAGGAAATATAGTCACGGTTTAATGTAGACCCCAGACTCCAAATGTG GGTTATGTTTTCGGTCAGAACGGCGAACAGCTATCGGTAGGATATAGCAG CCAAATTCATCTGGATGGGTGTTACAGGAGTGACTCTATATACGGTGATA TACATATACGCGAATGTGTTGGCAGGCTCTTTTCACCGGCCGGGCAGAAG ATGCCATGAAGATGGCACGCGTCACGGAGGCAATGCTGCCGCCCGGAGAT GAGCACAGGTGAGCGGCATCCACTGGAAGATTAGGCCGCGAATCTTCGGC ATCCACGCCGTACATCTGGCCACATCTTCCACATCTACCCTGTAGATGTG ATCATGTTGTCGGGACACACCGGGCAGATCTGACAGTGCGCTGACGTGCC CCACCTTGCTCACCCTTCCCGACTTTGACGGTGGCACGACTCCGCCAGTG GCGTCCTCGGCAGCTCCCGCGGCGTGTTTTATCCGAGCGTGTTGAAATCG TTTTGTCCGACACAACCAACATTCTGACATATCAAGTTTCTACTCGACGA TCAAGTATCTGTGATGTTATCAGGCTGACCGAACGCCGACCCTTGACGGA AGCATACCCACAGGGTGTGTTGCCCAGCCGCCTCCACGAACCCATGGCGA CTGGAAGTGGCATTTAGAGCAGGCAACGCTCCAGCTTGAGTAAGGTTCTC CGTGTCGAAAAAAACCCAAACGTGTCCGTCCGTCCGTCCGACCCGACCCG ACCCGACCCGTGAGATTGCCTGAGTAAGGTTCTCCGTGTCGAAAAAAACC CAAATCCCACAAGATGTCCACAACCTCTCAACTCGGTTCTCCTTATGGTT CGCTACATTGAGCAATGCAGCAATCCTCCAGCAAGGGGTCATAAACCTCT CTATTCGGTGCGCCTAATGGTTCTCAATATCGTTCAACGTCTCCACCAGG TTATTTTCGTGCCCACATCGTGCAAGGGGGGGGTTCCCGCCGCCTGTCAT GCATACTTCCCCGCAAGAATAATATCATAAGAGTACAAAACGCCATTACG GGGTACCATAGTAAATAGGACCTACGGTACACACAAAAAATCTATGTACA TTTACCTATTTTTGCTAACAATATTTGGTCCTACTAACTATGGCCCCCCG TAATAGTAGCATGCGGCAGAAAACAATACACTCTTAGGAAACGCCACGCC ATCGCACATCGTTGTCGCTCCATCTCGTGTACGTCATTCGCTGGGATACT TTGTGACCTCGTCGAAATGCACGCCGAGCCAGATCTTCACGTCTTGCGTG CTCCCGCCGGCTTAACAAATACGGGGCTCGATATCGACTTCTTGTTAATT TGTTATTGGCATTTCAGCGGGGTCCAACACATGCTCGGCGGCAACATCCC CATGGGCAAGCTCTTCCTGGAGCCTTACTCCATGACCAAGTGGCATGTCA TGATCAGGTGCGAGGCGGTGGCACACGCTTCATCATTTTGAAACACGCCT TCTCCGGGTTCCCGGTATGAGGCGCTCTTTGATATATTCCGAAGTGGTTT ACTTCGAGCGAGGTACCGCAATGTCTTCATAGTACGCGCAACGCGATGAT GAACAGTTTGGGTGGGCTGGGCACGAAGCGAAGACGTTCCGTGTTTTGTT TCTCATCGCTAACGCGGGAGTGCAAGCATATTGGGTACACACTGCCGTAG TCTTTCGTATAGGAGACCTGCCGGTCAGAAATGGCCCGGTCCAGAACGCG GCCCCTCCCTCGAGACAGTACGGTGGCGTGGCTCTTGCCATAATTTTGGC GAGCTACGTGATCAAGTCGGATCAACCCAATCCCAGATCAAGGTCCAGCA CCCCTGCATCACTTGACTGCAATAGTCACCCAGGTGACACAAATTAAAAA TTGCCAAGAGTTTAGAGAGATACACCGAGTGACCGAATACAGTGCGTTCT GACAATCCCTGCAATGAGCCGAGCCTAAGCGTCCAGGTTTTTTCGGAAAT CAATTGTTTGGGGGGGCATGCAGAGCTCTCTAACCCCTGCAGGAGTACAC TCCCGTTTGGGGGACAATTGGGGACAAATTAGTTGGAATAAGAGACAGAT ACAAGTTTCTGGACAATGCAGCCAGCACCTCAAAGAGCCTCACAAAAAAA TTACCGGGTAGTAAAGGTGCTATATACTGCCCCTTACCATACCGCACGTC ATCTGATTGCAGTAGCTTGTGTCCCACAACGTGCCGCTGACTGGAAGGTT CGGGATGTGGGACGAGATCATCGCCGAGCCACAGTACGAGGACTGCGAGC TGTACGCAACAGGAGTCGCAACGGGGTTCTACGCCCGTGGTATTGCCTTA GCCTCCATGGGAATGGTCCCCGAGGCGGAAGAGGAACAGGTGAGGCGGGC GGGCGGGCGGGCGAACGCAAACTCGGAAGGCACGGATTGATTTAGTTGTT TTTCCCTCGGCTGCCGCGGCGCGTGGCGGTGCTATATGCAGGGGAATGTG GGCTTCATAATGGCAGGCTACTGTAGATATGGCCACACCGTCCTTCTGTT CTCACCGCCGGATACCGTCATCTCGTTCGCGGTACAGCGCAGGACACCTA ATGCGAAATAAGAAAGCTAACCCTGGCTGGATTTCGTATTTGATAGAGAT AGTACCATCTTCACTATTTTCAAGATAACGGCTCTCGCGTTACTTATTTT CCTCGAAACCCCAGCTTGCCTTTCGTACTGAGCCTGTTTCTTGTTTCTGT GAGTGTCCTCTGCTGCATTGCTGCTGAGGCTGCCCGCGAGGAATCCCCAC GGGAACGACGTTCCTCGACGGAGCGAAGTGTCGACAACATTTTGCGAGGT TCTGCGAGAGTCAACCGTAAAGGCAGTTTACGGTACTGTAAAGACTTTTG ACGCTCACCACGGCAGCGGTAGCATTGCATTTATTTTTACCCCCCCCCCC CCCCCCCCCCGACTCAAAAGAGCTAATGGACACTGACCTTGACGAAACAT GTAAAGGCACAACCCAGCCCGACCGACAATCCTCTCGGCTTAGCTAGCTA GCCTGGAATACGAAGGTTTTGTATTGTTGAAACAAGGTTACGATGTTGGG TACCAGTCTGATCGTAAACATAAGGGACGTGTAGACAGTAGCAAAAGCTA GAAATGTGTGTTATATTTATGCTCGTACGTTGGGTAGTCGTTCAGTTCAG GAACCTGGTCCGCTCCAGTTGCTATCCAAACGCTAGCGCGCGTCTTCTGC CAAGTCATCCGTAAACCGATACACGGTGGGGTACTACTGTAAAGAAACTA CTGCAGCCATATATATTTGTTTGTGTCGCATCCACGGGTGCACGACGGCG CTACATCGGTATGACGGTGTGGCGCACAAGGGGGGGGTTACAAGACACAA CTGGAGGATGATAATTAGTGAAATCTCGGGCATAACTCGGTCAAGTATCT GGACGAGATCCAACTCGACATACCACTCTACCGGCGGAAGTTTTCAGGAC CGCTTGGTATTCATATTGATTTTCAAAGGCTCCTTATATTGCAGGCCTAA GTGGTAGCTTCCATGAAAGCACCACCACAGCACAACTTCACGTGTTATCG CTTCTTACTTTTTCGGTGAGATTTCGAACAGAAACACTGCAGAAATTGTA CCCTCCCCTACTATTTACCACCACAGCACAGCTTCACGTGGTATCGCTTC TTACTTTTTCGGTGAGATTTTAAACGAAAATCAACAAAAATCGTACCATC TACGACTACCCCCCCCCCCCCCCCTCCACCTTGCTATGCCTCTTTTTCTT GGAACCCCCACCCCCTCAGGCCAAATACCTAGCGAGCATGCAGCACCCAG CCCTCGCAGGACGCATGCTACACAACAGTAAGTCGTGTTTTTCCCCAAAA TGGTGGTGTCGGCACATCACGCGCTAGACGAGCCTCATCTGCTATGTCTA TTCTGACGGCGTGCTACGATGGGAGTAGCCCTTTTCGCCCCAAAACAAAT TCTGGCTGACAGGGGGGGGGGGGGGGTCCTCATGAGGAACTATTAATGTG CACCTAGTAATAGTATGGCTGGAGTCCCATAATTCGAGTCTTTACAGCAT GGTTCGTTGTATACCAGGTGCCGTTTGTTTTTTGGGCGATTGTTCGTCGT GGCTACGCTTGCGTTCTTCTTTCTCGAAGACGGCAGGTTTTCGGTGAGAA ATCCAGTAGTGAAAATCTCCCTGAGTAACGGAGGCTCGGGACATAAAAGG TGCGCTATCTTATCCCTGCTACCCCTGCTACGGGTGGCTCAAACGTCAGT CTGCGGTGCAGTTCGCACCCCCAACACCTGGTACTGCTGCTGTACAGAAC CGTATTTTTTCATTCGCCGGTTTGCCGAATTTCAGCAGGTTTTGTTGCTC TGGTTGTTTCCAACTGTTCTCGACTGATGACAAAACCTCCCCGGCAAGAT ACAGTTCAGCAGTGTGGTCAGCGCACCAAAAACGGTTGCAGGCAGCATTC TACCGACAGTGATGAGGTTTCCGTTCAACTTACATCACCCCTCTCGACAC GTTCATTGTTTTTGTTGGAAAAAAAAAAGATCCCGTCATGTCGGATGAAG AGCCCTGCATCTTGAAGCTCGGGGCGGCCATGCTCTCGGGGGAGATCGAG TACCGCAAGGGGAACTTCGAGACGGCGTTCGAGCTCCTGCGGGAAGCGGT CCGG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8426:2637..11490+

>mRNA_M-pyrifera_M_contig8426.19658.1 ID=mRNA_M-pyrifera_M_contig8426.19658.1|Name=mRNA_M-pyrifera_M_contig8426.19658.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2490bp|location=Sequence derived from alignment at M-pyrifera_M_contig8426:2637..11490+ (Macrocystis pyrifera P11B4 male)
TCTTTTGGCGCTGCAGCGTATGCCTTGAGTAGCAACTACAACTTCGAGCC
GGGGTTCGGCAGCGGATTCGATCCCATCCAAGCGGCCGTGGCGAAGGTCG
ACGCAGAAGGCTCCCCCTACTCGGAGCTGGAGAGGGACCTGATCCACGCG
ATGACAACGCGCTCCTCCGCCGAGAGCAAGGCCGCGGTAGACCCTTCTAA
GTTTATGTTCGTCTTTTGGCGCTGCAGCGTATGCCTTGAGTAGCAACTAC
AACTTCGAGCCGGGGTTCGGCAGCGGATTCGATCCCATCCAAGCGGCCGT
GGCGAAGGTCGACGCAGAAGGCTCCCCCTACTCGGAGCTGGAGAGGGACC
TGATCCACGCGATGACAACGCGCTCCTCCGCCGAGAGCAAGGCCGCGGTA
GACCCTTCTAAGTTTATGTTCGGCAACCCACCGGAGCTAAACGTTGATTA
TTCCGGCAACCCACCGGAGCTAAACGTTGATTATTCCGATGCAATGGCCA
AGCTGCACAAAAAGCATGTGGGCGACGTCGACGTCGCAGCGGTGTACGCG
GAATCCCTGATGGTCCTGAAGCCGTGGGCGATGTGGACGAGGGATTCCGT
GTCCGGCGACATAACTCCCACGATCGAGGGCACTCTTGTCGCCAAGGACG
TCTTGGAGCGGATGCAATGGCCAAGCTGCACAAAAAGCATGTGGGCGACG
TCGACGTCGCAGCGGTGTACGCGGAATCCCTGATGGTCCTGAAGCCGTGG
GCGATGTGGACGAGGGATTCCGTGTCCGGCGACATAACTCCCACGATCGA
GGGCACTCTTGTCGCCAAGGACGTCTTGGAGCGGGCCATGGAGGCCCCTG
AAGGGATGGAGCACCCAGGCGTCCTCCACCTGTACTGCCATCTCATGGAG
CTCTCGGACGACCCCATCGCGGCAATGCCGGCTGCAAACGCCTTGAGGAC
TCTGTACCCCTCCGCGGGCCACTTGACCCATATGGCTTCGCACATCGACA
TCTGGGCTGGACAGTACAAGGCAAGGATACTAACAACATATATATGCCAT
GGAGGCCCCTGAAGGGATGGAGCACCCAGGCGTCCTCCACCTGTACTGCC
ATCTCATGGAGCTCTCGGACGACCCCATCGCGGCAATGCCGGCTGCAAAC
GCCTTGAGGACTCTGTACCCCTCCGCGGGCCACTTGACCCATATGGCTTC
GCACATCGACATCTGGGCTGGACAGTACAAGGCAAGGATACTAACAACAT
ATATATCGCTGGATATCAACTTGTCGTCTATCGACACGGATAATGCTACT
GTCGAGTATACAGGCGCTGGATATCAACTTGTCGTCTATCGACACGGATA
ATGCTACTGTCGAGTATACAGGAATGGAAAGTAATTTTTACAAGGGCTAC
CGCATTCACAACGTTCACATGGCTGCATGGGCGAATGGAAAGTAATTTTT
ACAAGGGCTACCGCATTCACAACGTTCACATGGCTGCATGGGCGGCTCTT
TTCACCGGCCGGGCAGAAGATGCCATGAAGATGGCACGCGTCACGGAGGC
AATGCTGCCGCCCGGAGATGAGCACAGGCTCTTTTCACCGGCCGGGCAGA
AGATGCCATGAAGATGGCACGCGTCACGGAGGCAATGCTGCCGCCCGGAG
ATGAGCACAGCGGGGTCCAACACATGCTCGGCGGCAACATCCCCATGGGC
AAGCTCTTCCTGGAGCCTTACTCCATGACCAAGTGGCATGTCATGATCAG
CGGGGTCCAACACATGCTCGGCGGCAACATCCCCATGGGCAAGCTCTTCC
TGGAGCCTTACTCCATGACCAAGTGGCATGTCATGATCAGGTTCGGGATG
TGGGACGAGATCATCGCCGAGCCACAGTACGAGGACTGCGAGCTGTACGC
AACAGGAGTCGCAACGGGGTTCTACGCCCGTGGTATTGCCTTAGCCTCCA
TGGGAATGGTCCCCGAGGCGGAAGAGGAACAGGTTCGGGATGTGGGACGA
GATCATCGCCGAGCCACAGTACGAGGACTGCGAGCTGTACGCAACAGGAG
TCGCAACGGGGTTCTACGCCCGTGGTATTGCCTTAGCCTCCATGGGAATG
GTCCCCGAGGCGGAAGAGGAACAGGCCAAATACCTAGCGAGCATGCAGCA
CCCAGCCCTCGCAGGACGCATGCTACACAACAGCCAAATACCTAGCGAGC
ATGCAGCACCCAGCCCTCGCAGGACGCATGCTACACAACAATCCCGTCAT
GTCGGATGAAGAGCCCTGCATCTTGAAGCTCGGGGCGGCCATGCTCTCGG
GGGAGATCGAGTACCGCAAGGGGAACTTCGAGACGGCGTTCGAGCTCCTG
CGGGAAGCGGTCCGGATCCCGTCATGTCGGATGAAGAGCCCTGCATCTTG
AAGCTCGGGGCGGCCATGCTCTCGGGGGAGATCGAGTACCGCAAGGGGAA
CTTCGAGACGGCGTTCGAGCTCCTGCGGGAAGCGGTCCGG
back to top