mRNA_M-pyrifera_M_contig84238.19651.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Match: A0A7S0ATD0_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ATD0_9DINO) HSP 1 Score: 120 bits (300), Expect = 1.960e-30 Identity = 55/77 (71.43%), Postives = 64/77 (83.12%), Query Frame = 1 Query: 7 LMRDFVTHARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEEARRRKLRLAALGLPSTHWASLGMQH 237 L+R + HARRVP+ AGSLLLW+S+L HQ + GG R+AQP+CWEPR RR E AR RKLRLAALGLPSTHWASLG+ H Sbjct: 277 LIRGWEEHARRVPMPAGSLLLWNSKLFHQSWIGGPRIAQPLCWEPRSRRDEGARERKLRLAALGLPSTHWASLGLPH 353
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Match: A0A7S2J091_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2J091_9DINO) HSP 1 Score: 113 bits (283), Expect = 1.300e-29 Identity = 53/74 (71.62%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 31 ARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEEARRRKLRLAALGLPSTHWASLGMQHDFTPA 252 ARRVPV AG+LLLW+S+ +HQG+ GG RLAQPVCWEP RR E AR RKLR+AALGLPSTHWASLG H A Sbjct: 131 ARRVPVPAGALLLWNSKTVHQGWRGGPRLAQPVCWEPASRRPEAARERKLRMAALGLPSTHWASLGFPHSMLGA 204
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Match: A0A7S2RLG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RLG7_9STRA) HSP 1 Score: 111 bits (278), Expect = 2.530e-27 Identity = 53/78 (67.95%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 7 LMRDFVTHARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEEARRRKLRLAALGLPSTHWASLGMQHD 240 LM+ +++HARRV V G LLLW SR HQG++GG RLAQPVCWEPRERR + R RKL LAALGLPSTH ASLG H+ Sbjct: 264 LMQGWLSHARRVTVPVGGLLLWSSRTTHQGWSGGPRLAQPVCWEPRERRSAKVRGRKLALAALGLPSTHSASLGQPHN 341
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Match: A0A7S0FFM3_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FFM3_9DINO) HSP 1 Score: 108 bits (269), Expect = 7.370e-26 Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 7 LMRDFVTHARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEEARRRKLRLAALGLPSTHWASLGMQHDFTPA 252 L + ++ ARRV GSLLLW+SRL+HQG+ GG RLAQPVCWEP RR E AR RK+++AA+GLPSTHW SLG+ H A Sbjct: 311 LSQAWLGAARRVSAPPGSLLLWNSRLVHQGWRGGPRLAQPVCWEPAGRRDERARERKMKMAAMGLPSTHWGSLGIPHTLVKA 392
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Match: A0A7S2NC27_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2NC27_9DINO) HSP 1 Score: 107 bits (268), Expect = 8.300e-26 Identity = 54/78 (69.23%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 7 LMRDFVTHARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEEARRRKLRLAALGLPSTHWASLGMQHD 240 L + HARRV V AG LLLW+SR LH G+ GG RLAQ VC EP RR E AR KLRLAALGLPSTHWA LGMQHD Sbjct: 278 LAAGWAEHARRVVVPAGGLLLWNSRTLHTGWRGGPRLAQTVCLEPASRRKETARLAKLRLAALGLPSTHWAQLGMQHD 355
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Match: A0A7S4RSJ1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RSJ1_9DINO) HSP 1 Score: 105 bits (261), Expect = 4.660e-25 Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 1 SGLMRDFVTHARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEEARRRKLRLAALGLPSTHWASLGMQH 237 + L ++ A RVPV GSL LW S+ LHQG++GG RLAQPVCWEP RR A RK+RLAALGLPSTHWASLG+ H Sbjct: 227 ASLQDSWLAGAGRVPVPRGSLFLWSSKTLHQGWSGGPRLAQPVCWEPMGRRDAAALDRKMRLAALGLPSTHWASLGIPH 305
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Match: A0A7S1RF61_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RF61_ALECA) HSP 1 Score: 105 bits (261), Expect = 6.980e-25 Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1 Query: 1 SGLMRDFVTHARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEEARRRKLRLAALGLPSTHWASLGMQH 237 S L ++ A RVPV G L LW SR LHQG++GG RLAQPVCWEP RR + RK+RLAALGLPSTHWASLG+ H Sbjct: 266 SALQDSWLRGAGRVPVPRGGLFLWSSRTLHQGWSGGPRLAQPVCWEPAGRRDDATLDRKMRLAALGLPSTHWASLGIPH 344
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Match: A0A7S2MM92_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2MM92_9DINO) HSP 1 Score: 102 bits (255), Expect = 2.380e-24 Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 7 LMRDFVTHARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEEARRRKLRLAALGLPSTHWASLGMQHD 240 L +V HARR V G L LW+SR +H G+ GG RLAQ VC+EP +RR E R K+RLAALGLPSTHWAS GMQHD Sbjct: 193 LAEGWVQHARRAVVPRGGLFLWNSRTVHTGWRGGPRLAQTVCFEPADRRSEAERIAKMRLAALGLPSTHWASAGMQHD 270
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Match: A0A7S1ZFD9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFD9_TRICV) HSP 1 Score: 99.8 bits (247), Expect = 6.430e-23 Identity = 49/73 (67.12%), Postives = 53/73 (72.60%), Query Frame = 1 Query: 31 ARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEEARRRKLRLAALGLPSTHWASLGMQHDFTP 249 ARR V AG LLLW S+ LHQG+ GG RLAQPVCWEP ERR +RKLRLAALGLPSTH AS G+ H P Sbjct: 270 ARRCRVPAGGLLLWSSKTLHQGWMGGPRLAQPVCWEPEERRSLGTLKRKLRLAALGLPSTHSASQGLPHYLVP 342
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Match: A0A7S4Q534_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q534_9DINO) HSP 1 Score: 99.8 bits (247), Expect = 8.390e-23 Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 7 LMRDFVTHARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEEARRRKLRLAALGLPSTHWASLGMQHD 240 L + ARR V AG+LL+WDSR +H G+ GG RLAQ VC EP RR E R KLRLAALGLPSTHWAS+GM+HD Sbjct: 289 LAAGWARQARRAVVPAGALLVWDSRTVHAGWLGGPRLAQAVCLEPASRRSECHRLAKLRLAALGLPSTHWASVGMEHD 366 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84238.19651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84238.19651.1 >prot_M-pyrifera_M_contig84238.19651.1 ID=prot_M-pyrifera_M_contig84238.19651.1|Name=mRNA_M-pyrifera_M_contig84238.19651.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp MRDFVTHARRVPVRAGSLLLWDSRLLHQGFAGGARLAQPVCWEPRERRGEback to top mRNA from alignment at M-pyrifera_M_contig84238:502..753- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84238.19651.1 ID=mRNA_M-pyrifera_M_contig84238.19651.1|Name=mRNA_M-pyrifera_M_contig84238.19651.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig84238:502..753- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84238:502..753- >mRNA_M-pyrifera_M_contig84238.19651.1 ID=mRNA_M-pyrifera_M_contig84238.19651.1|Name=mRNA_M-pyrifera_M_contig84238.19651.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig84238:502..753- (Macrocystis pyrifera P11B4 male)back to top |