mRNA_M-pyrifera_M_contig84232.19649.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84232.19649.1
Unique NamemRNA_M-pyrifera_M_contig84232.19649.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Match: A0A7S4M554_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M554_9EUKA)

HSP 1 Score: 301 bits (770), Expect = 6.370e-96
Identity = 155/271 (57.20%), Postives = 192/271 (70.85%), Query Frame = 1
Query:    4 AKLNMASTEGG-REVAMREFFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQARRRDDDIAIVTAGIRVRLSKQGADYRVEEAGLGYGGMAAKTVFCPQTEQGMVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLRVLHTLSPAAVPARYLSAIAEFDRGLSHGTQRYQTNGELAPVTFPVMHTSAEKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVVRYVDASDVEGHNLAAP 813
            A L M S + G ++V +R+FF  YR V M+  E+L+S+ VPFT E EFFH+YKQARRRDDDIAIVT+GIRVRL   G ++++ E   GYGGMA  TVFCPQTE+ +VG+VWNE LL  A   LE DLPL+ NAPGGM+QFRRTLTTSFFYKF+LRV + L P  + A+  SAI +F R +SHG Q YQTN  +AP+T P++H  A KQVTGEALYTDD+      ++GA V ST +H RI+SID S AL   GVV +    D+ G N   P
Sbjct:  114 AILTMESLDNGEKQVNIRDFFTAYRKVLMEDNEILKSIFVPFTVENEFFHAYKQARRRDDDIAIVTSGIRVRLEPDGGEHKIREIAFGYGGMAPTTVFCPQTEEQLVGKVWNEDLLPLAYEFLEKDLPLSDNAPGGMIQFRRTLTTSFFYKFFLRVTNQLYPDKISAKEKSAIPDFHRDVSHGIQVYQTNESVAPITLPIVHAGAHKQVTGEALYTDDMTRE-NAVHGAFVCSTKAHARIVSIDASDALEYRGVVGFFTGKDIPGANELGP 383          
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Match: A0A1L2FUV8_9MYCE (Xanthine dehydrogenase n=1 Tax=Rostrostelium ellipticum TaxID=361140 RepID=A0A1L2FUV8_9MYCE)

HSP 1 Score: 250 bits (638), Expect = 3.720e-72
Identity = 137/268 (51.12%), Postives = 179/268 (66.79%), Query Frame = 1
Query:   37 REVAMREFFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQARRRDDDIAIVTAGIRVRLSKQGA---DYRVEEAGLGYGGMAAKTVFCPQTEQGMVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLRV---LHTLS---PAAVPARYLSAIAEFDRGLSHGTQRYQTNGELAPVTFPVMHTSAEKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVVRYVDASDVEGHNLAAP 813
            R V +  FF  YRTV+++  E+L  + VPFT+ LEF ++YKQ+RRRDDDIAIV+   RV  + Q A   D+RV ++ L YGGMA K V  P T+  +   VW+ ALL +A ++LE DLPLA  APGGM+++RR+LTTSFF+K++LRV   LHTLS   P A+ AR L+AI ++ R LS G Q YQT     PVT  V H +A+KQV+GEA+YTDD+       Y A+V ST +H  ILS+DP+ ALAMPGV  +  A DV G N   P
Sbjct:  420 RAVPLATFFKSYRTVDIRPDEILLKIFVPFTRPLEFVYAYKQSRRRDDDIAIVSCCFRVHFAPQDAASGDFRVLDSTLAYGGMAVKAVTAPLTQDLLKNAVWSRALLDRAYQTLEQDLPLAQGAPGGMIEYRRSLTTSFFFKYFLRVTHALHTLSKHAPLALDARELTAIEKYSRPLSSGEQTYQTQPHQHPVTQAVKHQAADKQVSGEAIYTDDIKQT--SYYAAMVMSTKAHANILSVDPAKALAMPGVKGFYAAKDVAGENQCGP 685          
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Match: A0A1L2FUV5_9MYCE (Xanthine dehydrogenase n=1 Tax=Cavenderia deminutiva TaxID=361123 RepID=A0A1L2FUV5_9MYCE)

HSP 1 Score: 245 bits (625), Expect = 2.260e-70
Identity = 125/259 (48.26%), Postives = 174/259 (67.18%), Query Frame = 1
Query:   37 REVAMREFFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQARRRDDDIAIVTAGIRVRLSKQGADYRVEEAGLGYGGMAAKTVFCPQTEQGMVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLRVLHTLSPAAVPARYLSAIAEFDRGLSHGTQRYQTNGELAPVTFPVMHTSAEKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVVRYVDASDVEGHNLAAP 813
            R V +  FF  YR V++ A EVLR++ VPFT+ LEF  +YKQ+RRRDDDIAIV+   RV+L K G ++RV++  L YGGM+ K V   +T + + G+VW+ +LL +    +  DLPLA  APGGM+++RR+LTTSFF+K++L ++ +     + AR  SA   + R LSHG Q YQT   + P++ PV H SA+KQVTGEA+Y DD+   +  LY A+V ST +H RI+SID S ALAM GV +++ A D+ G N   P
Sbjct:  402 RTVPIATFFKSYRVVDIAADEVLRAIIVPFTKPLEFVQAYKQSRRRDDDIAIVSCCFRVQLEKSGEEHRVKDCSLAYGGMSVKAVLATRTMEFLKGKVWSRSLLDETYSMIAADLPLAQGAPGGMIEYRRSLTTSFFFKYFL-LISSFIAGDIDAREASAFQPYTRELSHGEQTYQTRPAMHPISEPVKHQSADKQVTGEAVYIDDIK--LTSLYSAMVMSTKAHARIVSIDASRALAMTGVKKFLTAKDIRGENQIGP 657          
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Match: A0A6P5ALA6_BRABE (Xanthine dehydrogenase/oxidase n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5ALA6_BRABE)

HSP 1 Score: 241 bits (615), Expect = 5.150e-69
Identity = 137/277 (49.46%), Postives = 173/277 (62.45%), Query Frame = 1
Query:    1 GAKLNMASTEGGREVAM--REFFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQARRRDDDIAIVTAGIRVRLSKQGADYRVEEAGLGYGGMAAKTVFCPQTEQGMVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLRVLHTLSPAAVPARYLSAIAEFDRGLSHGTQRYQT----NGELAPVTFPVMHTSAEKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVVRYVDASDVEGHNLAAP 813
            G  + +AS +GG  V     +FF  YR   +   EV+ S++VPFT+E E+F +YKQARRRDDDIAIV A  RVR  ++G +  + + GL +GGMA  TV    T   + G  W+  LL +AC SLE DLPL P+ PGGM +FRRTLTTSFF+KF+L V   L+   VP  Y SA + + R   HG+Q YQ      G    V  P+MH SA KQVTGEA+YTDD+    G LY  +V S  +H +ILSIDPSAAL MPGV  +V A DV G N+  P
Sbjct:  423 GCTVTVASHQGGSRVVRMDHDFFPGYRRTAVAPEEVMVSLDVPFTKENEYFLAYKQARRRDDDIAIVNAAFRVRF-EEGTNV-IRDIGLSFGGMAPTTVMARNTANRLTGLKWDNDLLPEACSSLEDDLPLPPSVPGGMAEFRRTLTTSFFFKFFLSVQQRLNIKDVPPPYRSACSLYHRESPHGSQMYQEVPEGQGREDAVGRPIMHLSALKQVTGEAVYTDDMPPLQGELYVGLVLSKKAHAKILSIDPSAALQMPGVEMFVGAEDVPGSNITGP 697          
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Match: A0A6P4YRM1_BRABE (Xanthine dehydrogenase/oxidase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YRM1_BRABE)

HSP 1 Score: 239 bits (609), Expect = 3.300e-68
Identity = 139/286 (48.60%), Postives = 175/286 (61.19%), Query Frame = 1
Query:    1 GAKLNMASTEGGREVAM--REFFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQARRRDDDIAIVTAGIRVRLSKQGADYRVEEAGLGYGGMAAKTVFCPQTEQGMVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLRVLHTLS--------PAAVPARYLSAIAEFDRGLSHGTQRYQT--NGELAP--VTFPVMHTSAEKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVVRYVDASDVEGHNLAAPD 816
            G  + +AS +GG  V     +FF  YR   +   EV+ S+++PFT+E EFF +YKQARRRDDDIAIV A   VR  ++     +++  L +GGMA  TV    T   +VG  W+  LL +AC SLE DLPL P+ PGGM +FRRTLTTSFF+KF+L V   L+        P  VP  Y SA + + R  SHGTQ YQ    G+     V  P+MH SA KQVTGEA+YTDD+    G LY  +V S  +H +ILSIDPSAAL MPGV  +V A DV G N+  PD
Sbjct:  403 GCTVTVASHQGGSRVVRMGHDFFPGYRRTALSPQEVMVSLDLPFTKENEFFLAYKQARRRDDDIAIVNAAFWVRFEEE--TNVIQDIALSFGGMAPTTVMARNTANRLVGLKWDNDLLPEACSSLEDDLPLPPSVPGGMAEFRRTLTTSFFFKFFLSVQQRLNLKVPFYLLPVDVPPTYRSACSLYHREPSHGTQMYQEVPEGQAREDAVGRPIMHLSALKQVTGEAVYTDDMPPLQGELYLGLVLSKKAHAKILSIDPSAALQMPGVEMFVSAKDVPGSNVTGPD 686          
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Match: F0ZAV7_DICPU (Xanthine dehydrogenase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZAV7_DICPU)

HSP 1 Score: 235 bits (599), Expect = 7.200e-67
Identity = 132/283 (46.64%), Postives = 174/283 (61.48%), Query Frame = 1
Query:    1 GAKLNMAST-EGG----REVAMREFFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQARRRDDDIAIVTAGIRVRLSK-QGADYRVEEAGLGYGGMAAKTVFCPQTEQGMVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLRVLHTLSPAAVPARY------LSAIAEFDRGLSHGTQRYQTNGELAPVTFPVMHTSAEKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVVRYVDASDVEGHNLAAP 813
            GA L M S  E G    R+V +  FF+KYR V++K  E+L+SV +P+T+ LEF  +YKQ+RRR+DDIAIV+   R+     +   ++V E  L YGGM  K V C  TEQ ++G +W+   L +  + LE+DLPLA  APGGM+++RR+LTTSFF+K++L V   L   +    Y      LS  A + R LS G Q YQT  E  P+T PV+H SA+KQVTGEALY DD+   +  LY   V ST +H +ILSID S AL  PGV  +  A DV G N   P
Sbjct:  396 GAILTMVSQDESGTIVERKVPIGSFFLKYRIVDIKPEEILQSVFIPYTRPLEFVQAYKQSRRREDDIAIVSCCFRILFENFENNQFKVRECVLAYGGMNVKAVTCQNTEQFLIGSIWDRNQLDEIYKKLEVDLPLAQGAPGGMIEYRRSLTTSFFFKYFLTVSKQLYEISKNPSYSLSDKELSVTAPYSRPLSKGQQEYQTQPEKHPITQPVIHQSADKQVTGEALYVDDIK--IKSLYTCFVQSTKAHAKILSIDASRALKAPGVKAFYSAKDVPGENNCGP 676          
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Match: A0A8J4UV23_9MYCE (Xanthine dehydrogenase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UV23_9MYCE)

HSP 1 Score: 234 bits (598), Expect = 9.780e-67
Identity = 122/261 (46.74%), Postives = 173/261 (66.28%), Query Frame = 1
Query:   37 REVAMREFFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQARRRDDDIAIVTAGIRVRLSKQGADYRVEEAGLGYGGMAAKTVFCPQTEQGMVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLRVLHTL-SPAAVPA-----RYLSAIAEFDRGLSHGTQRYQTNGELAPVTFPVMHTSAEKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVVRYVDASDVEGHN 801
            R+V + +FF+KYR V++K  E+L SV +P+T+ LEF ++YKQ+RRR+DDIAIV+   R    ++   ++V+E  L YGGM  K V CP  EQ +VG++WN+ +L +  + LE DLPLA  APGGM+++RR+LTTSFF+KFYL V   L   +++P      + LSA  ++ R  SH  Q YQ+N  L PV   V H SA+KQVTGEA+Y DD+   +  L+ A+V ++ +H  I SIDPS ALA  GV  +  A D++G N
Sbjct:  409 RKVHINQFFLKYRIVDIKPDEILESVFIPYTRPLEFVYAYKQSRRREDDIAIVSCCFRFFFEREDQVFKVKECTLAYGGMNIKAVTCPSAEQFLVGKIWNKDVLQETYKYLENDLPLAQGAPGGMIEYRRSLTTSFFFKFYLTVCKKLFEQSSIPEYQVSEKELSATDKYTRPASHAEQNYQSNPALHPVNMAVKHQSADKQVTGEAVYVDDIQ--IVSLHAAMVLASKAHAYIKSIDPSKALAYKGVKAFYCAKDIKGEN 667          
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Match: A0A6P5AL18_BRABE (Xanthine dehydrogenase/oxidase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AL18_BRABE)

HSP 1 Score: 231 bits (588), Expect = 2.250e-65
Identity = 132/274 (48.18%), Postives = 170/274 (62.04%), Query Frame = 1
Query:    1 GAKLNMASTEGGREVAM--REFFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQARRRDDDIAIVTAGIRVRLSKQGADYRVEEAGLGYGGMAAKTVFCPQTEQGMVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLRVLHTLSPAAVPARYLSAIAEFDRGLSHGTQRYQT--NGELAPVTF--PVMHTSAEKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVVRYVDASDVEGHNL 804
            G  + +AS +GG  V     +FF  YR   +   EV+ S++VPFT+E E+F +YKQARRRDDDIAIV A  RVR  ++G +  + +  L +GGMA  TV    T   + G  W+  LL +AC SLE D+PL P+ PGGM +FRRTLTTSFF+KF+L V   L+   VP  Y SA + + R L+HG+Q YQ    G+    T   P+MH SA K  TGEA+YTDD+    G LY  +V S   H +ILS DPSAAL MPGV  +V A DV G N+
Sbjct:  408 GCTVTVASHQGGSRVVRMDHDFFPGYRRTALTPQEVMVSLDVPFTKENEYFLAYKQARRRDDDIAIVNAAFRVRF-EEGTNV-IRDIALSFGGMAPTTVMACNTANRLTGLKWDNDLLPEACSSLEDDMPLPPSVPGGMAEFRRTLTTSFFFKFFLSVQQRLNIKDVPPPYRSACSLYHRELAHGSQMYQEVPEGQAQEDTVGRPIMHLSALKHATGEAVYTDDMPPLQGELYVGLVLSKKVHAKILSFDPSAALQMPGVEMFVGAEDVPGSNI 679          
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Match: C3ZM22_BRAFL (Xanthine dehydrogenase/oxidase n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZM22_BRAFL)

HSP 1 Score: 230 bits (587), Expect = 2.980e-65
Identity = 133/285 (46.67%), Postives = 174/285 (61.05%), Query Frame = 1
Query:    1 GAKLNMASTEGGREVAMRE--FFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQARRRDDDIAIVTAGIRVRLSKQGADYRVEEAGLGYGGMAAKTVFCPQTEQGMVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLRVLHTLS--------PAAVPARYLSAIAEFDRGLSHGTQRYQT--NGELAP--VTFPVMHTSAEKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVVRYVDASDVEGHNLAAP 813
            G  + + S +GG  V   +  FF  YR   +   EV+ S++VPFT+E E+F +YKQARRRDDDIAIV A  RV+  ++G +  +++  L +GGMA  TV    T   ++G  W+  LL +AC  LE DLPL+P+ PGGMV+FRRTLTTSFF+KF+L V   L+           VP  Y SA + + R  S GTQ YQ    G+     V  P+MH SA KQ TGEA+YTDD+ H  G LY  +V S  +H +I+SIDPS AL MPGV  +V A DV G N+  P
Sbjct:  392 GCTMTVMSHQGGSRVVKMDHTFFPGYRETALTPEEVMMSLDVPFTKENEYFLAYKQARRRDDDIAIVNAAFRVQF-EEGTNV-IKDVALSFGGMAPTTVMARNTANSLIGLKWDNDLLPEACSCLEDDLPLSPSVPGGMVEFRRTLTTSFFFKFFLSVQQRLNLKVGGLSGSVDVPPSYRSAYSLYHREPSQGTQMYQEVPKGQRRDDAVGRPIMHLSALKQATGEAVYTDDMPHIQGELYLGLVLSKKAHAKIVSIDPSEALKMPGVETFVSAEDVPGSNITGP 674          
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Match: A0A1L2FUW7_9MYCE (Xanthine dehydrogenase n=1 Tax=Coremiostelium polycephalum TaxID=142831 RepID=A0A1L2FUW7_9MYCE)

HSP 1 Score: 229 bits (585), Expect = 5.000e-65
Identity = 132/287 (45.99%), Postives = 178/287 (62.02%), Query Frame = 1
Query:    1 GAKLNMASTEGG------REVAMREFFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQARRRDDDIAIVTAGIRVRLSKQGAD---YRVEEAGLGYGGMAAKTVFCPQTEQGMVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLRVLHTL------SPA-AVPARYLSAIAEFDRGLSHGTQRYQTNGELAPVTFPVMHTSAEKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVVRYVDASDVEGHNLAAP 813
            GA+L M S          R V +  FF+KYR V+++  E+L SV +PFT+ELEF  +YKQ+RRRDDDIAIV+   RV L K+ +    ++V+E  L YGGM  K V  P+T+Q ++  +W+  LL     +L  DLPLA  APGGM+++RR+LTTSFF+KF+L V   L       P+ +V  R LSA  +  R  SHG Q YQT     PV+ P+ H SA+KQVTGEA+YTDD+   +  LY AIV S+ +H +I SI+P  AL+ PGV  +  A D+ G N   P
Sbjct:  298 GAELTMLSINEQTGEHVKRVVHISNFFLKYRIVDIQPNEILYSVHIPFTRELEFVEAYKQSRRRDDDIAIVSCCFRVLLEKEESQKNQFKVKECVLAYGGMNIKAVTAPKTQQLLLNSIWDRKLLDPIYLTLADDLPLAAGAPGGMIEYRRSLTTSFFFKFFLSVNQKLYEITENDPSYSVDKRELSAFEKHHRPTSHGEQTYQTQPHNQPVSMPIKHQSADKQVTGEAIYTDDIQ--MKSLYAAIVPSSKAHAKIKSINPEKALSAPGVKGFYCAKDIPGINQCGP 582          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84232.19649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4M554_9EUKA6.370e-9657.20Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A1L2FUV8_9MYCE3.720e-7251.12Xanthine dehydrogenase n=1 Tax=Rostrostelium ellip... [more]
A0A1L2FUV5_9MYCE2.260e-7048.26Xanthine dehydrogenase n=1 Tax=Cavenderia deminuti... [more]
A0A6P5ALA6_BRABE5.150e-6949.46Xanthine dehydrogenase/oxidase n=3 Tax=Branchiosto... [more]
A0A6P4YRM1_BRABE3.300e-6848.60Xanthine dehydrogenase/oxidase n=1 Tax=Branchiosto... [more]
F0ZAV7_DICPU7.200e-6746.64Xanthine dehydrogenase n=1 Tax=Dictyostelium purpu... [more]
A0A8J4UV23_9MYCE9.780e-6746.74Xanthine dehydrogenase n=1 Tax=Polysphondylium vio... [more]
A0A6P5AL18_BRABE2.250e-6548.18Xanthine dehydrogenase/oxidase n=1 Tax=Branchiosto... [more]
C3ZM22_BRAFL2.980e-6546.67Xanthine dehydrogenase/oxidase n=2 Tax=Branchiosto... [more]
A0A1L2FUW7_9MYCE5.000e-6545.99Xanthine dehydrogenase n=1 Tax=Coremiostelium poly... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84232contigM-pyrifera_M_contig84232:66..881 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score232.6
Seed ortholog evalue2.1e-58
Seed eggNOG ortholog5786.XP_003284550.1
Preferred nameXDH1
KEGG rclassRC00143,RC02017,RC02199
KEGG koko:K00106
KEGG ReactionR01768,R01769,R02103,R02107,R07942,R07977,R07978,R07979,R08235
KEGG Pathwayko00230,ko00232,ko00983,ko01100,ko01110,ko01120,ko04146,map00230,map00232,map00983,map01100,map01110,map01120,map04146
KEGG ModuleM00546
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0004854,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006801,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009115,GO:0009414,GO:0009415,GO:0009628,GO:0009987,GO:0010035,GO:0016491,GO:0016725,GO:0016726,GO:0016903,GO:0019439,GO:0034641,GO:0036094,GO:0042221,GO:0042554,GO:0043167,GO:0043168,GO:0043546,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046110,GO:0046113,GO:0046483,GO:0046700,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051536,GO:0051537,GO:0051540,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072523,GO:0072593,GO:0097159,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901700
EggNOG free text desc.Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
EggNOG OGs3XAXP@554915,COG4631@1,KOG0430@2759
EC1.17.1.4,1.17.3.2
COG Functional cat.F
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons1
Model size816
Cds size801
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816749.8175206-UTR-M-pyrifera_M_contig84232:65..801622816749.8175206-UTR-M-pyrifera_M_contig84232:65..80Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig84232 66..80 +
1692278155.8257978-UTR-M-pyrifera_M_contig84232:65..801692278155.8257978-UTR-M-pyrifera_M_contig84232:65..80Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig84232 66..80 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816749.8282814-CDS-M-pyrifera_M_contig84232:80..8811622816749.8282814-CDS-M-pyrifera_M_contig84232:80..881Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84232 81..881 +
1692278155.8430452-CDS-M-pyrifera_M_contig84232:80..8811692278155.8430452-CDS-M-pyrifera_M_contig84232:80..881Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84232 81..881 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84232.19649.1prot_M-pyrifera_M_contig84232.19649.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84232 81..881 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84232.19649.1

>prot_M-pyrifera_M_contig84232.19649.1 ID=prot_M-pyrifera_M_contig84232.19649.1|Name=mRNA_M-pyrifera_M_contig84232.19649.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp
MASTEGGREVAMREFFIKYRTVNMKAGEVLRSVEVPFTQELEFFHSYKQA
RRRDDDIAIVTAGIRVRLSKQGADYRVEEAGLGYGGMAAKTVFCPQTEQG
MVGQVWNEALLHQACRSLELDLPLAPNAPGGMVQFRRTLTTSFFYKFYLR
VLHTLSPAAVPARYLSAIAEFDRGLSHGTQRYQTNGELAPVTFPVMHTSA
EKQVTGEALYTDDVAHPVGGLYGAIVFSTVSHGRILSIDPSAALAMPGVV
RYVDASDVEGHNLAAPD
back to top

mRNA from alignment at M-pyrifera_M_contig84232:66..881+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84232.19649.1 ID=mRNA_M-pyrifera_M_contig84232.19649.1|Name=mRNA_M-pyrifera_M_contig84232.19649.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig84232:66..881+ (Macrocystis pyrifera P11B4 male)
GGGGCGAAGCTGAACATGGCGTCGACGGAGGGCGGACGTGAAGTGGCGAT GCGGGAGTTCTTCATCAAGTACCGCACGGTGAACATGAAGGCAGGCGAGG TGCTGCGCTCGGTGGAGGTTCCCTTCACGCAGGAGCTGGAATTCTTCCAC TCCTACAAGCAGGCTCGACGCAGGGACGACGACATTGCGATCGTGACGGC CGGCATCCGCGTGCGCCTTTCCAAGCAGGGAGCAGACTATCGCGTGGAGG AGGCCGGCCTCGGCTACGGCGGAATGGCCGCCAAGACTGTCTTCTGCCCC CAGACGGAGCAGGGCATGGTGGGCCAGGTCTGGAACGAGGCCCTTCTCCA CCAGGCCTGTCGCTCGCTGGAGCTGGACCTCCCGCTGGCACCCAACGCGC CAGGCGGCATGGTGCAGTTCCGCAGGACGCTGACGACGTCGTTCTTCTAC AAGTTCTACCTGCGCGTGCTCCACACCCTCTCGCCTGCCGCGGTGCCTGC TCGCTACCTCTCTGCCATCGCAGAGTTCGACAGGGGCCTCTCGCACGGCA CGCAGCGCTACCAGACCAACGGCGAGCTCGCGCCCGTCACCTTCCCCGTC ATGCACACCTCTGCAGAGAAGCAGGTCACCGGCGAGGCCCTCTACACCGA CGACGTCGCCCACCCTGTCGGCGGCCTCTACGGAGCCATCGTCTTCTCCA CTGTGTCGCACGGTCGCATCCTCTCCATCGACCCCAGCGCCGCACTGGCG ATGCCTGGCGTCGTCCGCTACGTCGACGCCAGCGACGTCGAGGGACACAA CTTGGCGGCGCCTGAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig84232:66..881+

>mRNA_M-pyrifera_M_contig84232.19649.1 ID=mRNA_M-pyrifera_M_contig84232.19649.1|Name=mRNA_M-pyrifera_M_contig84232.19649.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1602bp|location=Sequence derived from alignment at M-pyrifera_M_contig84232:66..881+ (Macrocystis pyrifera P11B4 male)
ATGGCGTCGACGGAGGGCGGACGTGAAGTGGCGATGCGGGAGTTCTTCAT
CAAGTACCGCACGGTGAACATGAAGGCAGGCGAGGTGCTGCGCTCGGTGG
AGGTTCCCTTCACGCAGGAGCTGGAATTCTTCCACTCCTACAAGCAGGCT
CGACGCAGGGACGACGACATTGCGATCGTGACGGCCGGCATCCGCGTGCG
CCTTTCCAAGCAGGGAGCAGACTATCGCGTGGAGGAGGCCGGCCTCGGCT
ACGGCGGAATGGCCGCCAAGACTGTCTTCTGCCCCCAGACGGAGCAGGGC
ATGGTGGGCCAGGTCTGGAACGAGGCCCTTCTCCACCAGGCCTGTCGCTC
GCTGGAGCTGGACCTCCCGCTGGCACCCAACGCGCCAGGCGGCATGGTGC
AGTTCCGCAGGACGCTGACGACGTCGTTCTTCTACAAGTTCTACCTGCGC
GTGCTCCACACCCTCTCGCCTGCCGCGGTGCCTGCTCGCTACCTCTCTGC
CATCGCAGAGTTCGACAGGGGCCTCTCGCACGGCACGCAGCGCTACCAGA
CCAACGGCGAGCTCGCGCCCGTCACCTTCCCCGTCATGCACACCTCTGCA
GAGAAGCAGGTCACCGGCGAGGCCCTCTACACCGACGACGTCGCCCACCC
TGTCGGCGGCCTCTACGGAGCCATCGTCTTCTCCACTGTGTCGCACGGTC
GCATCCTCTCCATCGACCCCAGCGCCGCACTGGCGATGCCTGGCGTCGTC
CGCTACGTCGACGCCAGCGACGTCGAGGGACACAACTTGGCGGCGCCTGA
CATGGCGTCGACGGAGGGCGGACGTGAAGTGGCGATGCGGGAGTTCTTCA
TCAAGTACCGCACGGTGAACATGAAGGCAGGCGAGGTGCTGCGCTCGGTG
GAGGTTCCCTTCACGCAGGAGCTGGAATTCTTCCACTCCTACAAGCAGGC
TCGACGCAGGGACGACGACATTGCGATCGTGACGGCCGGCATCCGCGTGC
GCCTTTCCAAGCAGGGAGCAGACTATCGCGTGGAGGAGGCCGGCCTCGGC
TACGGCGGAATGGCCGCCAAGACTGTCTTCTGCCCCCAGACGGAGCAGGG
CATGGTGGGCCAGGTCTGGAACGAGGCCCTTCTCCACCAGGCCTGTCGCT
CGCTGGAGCTGGACCTCCCGCTGGCACCCAACGCGCCAGGCGGCATGGTG
CAGTTCCGCAGGACGCTGACGACGTCGTTCTTCTACAAGTTCTACCTGCG
CGTGCTCCACACCCTCTCGCCTGCCGCGGTGCCTGCTCGCTACCTCTCTG
CCATCGCAGAGTTCGACAGGGGCCTCTCGCACGGCACGCAGCGCTACCAG
ACCAACGGCGAGCTCGCGCCCGTCACCTTCCCCGTCATGCACACCTCTGC
AGAGAAGCAGGTCACCGGCGAGGCCCTCTACACCGACGACGTCGCCCACC
CTGTCGGCGGCCTCTACGGAGCCATCGTCTTCTCCACTGTGTCGCACGGT
CGCATCCTCTCCATCGACCCCAGCGCCGCACTGGCGATGCCTGGCGTCGT
CCGCTACGTCGACGCCAGCGACGTCGAGGGACACAACTTGGCGGCGCCTG
AC
back to top