mRNA_M-pyrifera_M_contig84227.19647.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84227.19647.1
Unique NamemRNA_M-pyrifera_M_contig84227.19647.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Match: A0A7Y2IF40_9ACTN (Glycolate oxidase iron-sulfur subunit n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IF40_9ACTN)

HSP 1 Score: 421 bits (1083), Expect = 5.650e-145
Identity = 203/293 (69.28%), Postives = 235/293 (80.20%), Query Frame = 1
Query:    1 LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLTDEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAGELTPTWQRLAFKPLGHPGLLRAGSKALGVAQRLHLVPDRLGISAEIPLRSAPLEASGTDVYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGLTDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLGTPEAQAFADRVYDIGEWLAQHVDRLPTVEPLDLTVAIQDPCHLRHVQK 879
            LD D+LN CVQCGLCLP CPTFRVTG+EA SPRGRI LMR+VQ + AP+T EVL SFETCVQCRGCEPACPSGVPYGHLME+TR  LA+ G + P WQRLA KPL HP +L  GSKAL  AQRL LVP RLGISA++P R +P+  SGTDV +FTGCVMDAWQR VH AGQRV+EAAGFGVTP+  +APCCGAL AHAGL  DTR+FA +M+     G   +  PI+VDSAGCGA MKDYGHLLGT EA+AF+ RV+DI E+LAQ++ +LP    L  TVA+QDPCH+RHVQ+
Sbjct:    5 LDDDELNMCVQCGLCLPHCPTFRVTGEEAKSPRGRIHLMREVQLNGAPVTAEVLDSFETCVQCRGCEPACPSGVPYGHLMERTREALADHGLMAPLWQRLAMKPLAHPQVLGVGSKALAAAQRLRLVPKRLGISADVPFRQSPMTTSGTDVIMFTGCVMDAWQRTVHTAGQRVLEAAGFGVTPSGPMAPCCGALHAHAGLAGDTRSFAGSMINSFSTGPLAD-APIVVDSAGCGAQMKDYGHLLGTSEAEAFSARVFDICEFLAQNLHKLPDGRQLPQTVAVQDPCHIRHVQR 296          
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Match: A0A2D8LTY8_9ACTN (Glycolate oxidase iron-sulfur subunit n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LTY8_9ACTN)

HSP 1 Score: 402 bits (1034), Expect = 1.410e-137
Identity = 195/293 (66.55%), Postives = 222/293 (75.77%), Query Frame = 1
Query:    1 LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLTDEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAGELTPTWQRLAFKPLGHPGLLRAGSKALGVAQRLHLVPDRLGISAEIPLRSAPLEASGTDVYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGLTDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLGTPEAQAFADRVYDIGEWLAQHVDRLPTVEPLDLTVAIQDPCHLRHVQK 879
            +DADDLN CVQCGLCLP CPT+RVTGDEA+SPRGRI LMR+VQD+ AP+T EV+ +F+TCVQCRGCEPACPSGVPYG L+E TRA LA+ G ++   QRLAF  L  P +LR  S  L +A RL LVP RLG+  ++PL       SG DVYLFTGCVMD WQR+VH AGQRV+EAAG GVTPT DLAPCCGAL  HAGL    R  AE  +  L   D    RPILVDSAGCGAAMK+YGHLL TPEA+AF+ RVYDI EWLA  +D LPT   LDL VA+QDPCH RHVQ+
Sbjct:    5 IDADDLNACVQCGLCLPHCPTYRVTGDEALSPRGRIHLMREVQDNAAPVTPEVVDAFDTCVQCRGCEPACPSGVPYGRLIESTRAVLADMGAVSTRRQRLAFWALSRPXILRLASSLLAIAARLRLVPKRLGVPTDLPLTRGQRHTSGDDVYLFTGCVMDVWQRDVHDAGQRVLEAAGVGVTPTGDLAPCCGALHTHAGLGGPARERAEATITALSADD----RPILVDSAGCGAAMKEYGHLLDTPEAEAFSARVYDIHEWLATRLDDLPTTAKLDLCVAVQDPCHQRHVQR 293          
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Match: A0A6B1EGZ6_9ACTN (Glycolate oxidase iron-sulfur subunit n=11 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EGZ6_9ACTN)

HSP 1 Score: 389 bits (999), Expect = 3.440e-132
Identity = 194/297 (65.32%), Postives = 226/297 (76.09%), Query Frame = 1
Query:    1 LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLTDEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAGELTPTWQRLAFKPLGHPGLLRAGSKALGVAQRLHLVPDR-LGISAEIPLRSAPLEASGTDVYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGLTDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLGTPEAQAFADRVYDIGEWLAQHVDRLPT---VEPLDLTVAIQDPCHLRHVQK 879
            L+ D+L  CV CGLCLP CPTF +TG +  SPRGRIALMR VQ+ DAP+TD+++ S ETCVQCRGCE ACPS VP+GHLME TRA LA+AG +TP WQRLA K L H  LL AGS  L +A RL LVP R LG+ A +PLR  PL ASG DV+LFTGCVMDAWQR+VH A QRV+EAAG GV PT   APCCGAL  HAGL  +T+  A  +MA L   D    RPILVD+AGCGAA+KDYGHLLGT EA+AF+ RV+D+ EWLA H+D L +   V PLD+TVA+QDPCHLRHVQ+
Sbjct:    5 LNDDELVACVSCGLCLPHCPTFVITGRDTESPRGRIALMRAVQNEDAPVTDDLIRSMETCVQCRGCETACPSAVPFGHLMEGTRAALADAGRITPRWQRLALKGLRHRRLLMAGSTLLALAIRLRLVPTRRLGLPARMPLRRPPLRASGNDVWLFTGCVMDAWQRDVHLAVQRVLEAAGVGVEPTGGAAPCCGALHIHAGLESETKDMAWQVMAGLSGDD----RPILVDAAGCGAALKDYGHLLGTDEARAFSARVFDVHEWLAGHLDELRSRHPVAPLDITVAVQDPCHLRHVQR 297          
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Match: A0A7K2D6N3_9ACTN (4Fe-4S dicluster domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2D6N3_9ACTN)

HSP 1 Score: 378 bits (970), Expect = 3.050e-126
Identity = 189/297 (63.64%), Postives = 223/297 (75.08%), Query Frame = 1
Query:    1 LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLTDEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAGELTPTWQRLAFKPLGHPGLLRAGSKALGVAQRLHLVPD-RLGISAEIPLRSAPLEASGTDVYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGLTDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLGTPEAQAFADRVYDIGEWLAQHVDRLPT---VEPLDLTVAIQDPCHLRHVQK 879
            LD D+L  CV CGLCLP CPTF +TG +  SPRGRIALMR VQ+  AP+TD+++ S ETCVQCRGCE ACPS VP+GHLME TRA LA AG +TP WQRLA + L H  LL AGS  L +A RL LVP  RLG+ A +PLR  PL  SG DV+LFTGCVMDAWQR+VH A QRV+EAAG GV PT   APCCGAL  HAGL  +T+A A  +M  L   D    RPILVD+AGCGA++KDYGHLLGT EA+AF+ RV+D+ EWLA+ +  L +   V+PLD+TVA+QDPCHLRHVQ+
Sbjct:  115 LDDDELVACVACGLCLPHCPTFVITGRDTESPRGRIALMRAVQNEGAPVTDDLIRSMETCVQCRGCETACPSAVPFGHLMEGTRAALAGAGRITPRWQRLALRTLRHRRLLLAGSTLLALAIRLRLVPTKRLGLPARMPLRRPPLRTSGDDVWLFTGCVMDAWQRDVHLAVQRVLEAAGAGVEPTGGAAPCCGALHIHAGLEAETKAMARRVMDGLSGDD----RPILVDAAGCGASLKDYGHLLGTDEARAFSARVFDVHEWLAERLVELRSRRPVDPLDVTVAVQDPCHLRHVQR 407          
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Match: A0A3C1KI97_9MICO (Glycolate oxidase (Fragment) n=1 Tax=Microbacterium ginsengisoli TaxID=400772 RepID=A0A3C1KI97_9MICO)

HSP 1 Score: 364 bits (934), Expect = 3.890e-124
Identity = 177/264 (67.05%), Postives = 201/264 (76.14%), Query Frame = 1
Query:    1 LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLTDEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAGELTPTWQRLAFKPLGHPGLLRAGSKALGVAQRLHLVPDRLGISAEIPLRSAPLEASGTDVYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGLTDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLGTPEAQAFADRVYDIGEWLA 792
            +DADDLN CVQCGLCLP CPT+RVTGDEA+SPRGRI LMR+VQD+ AP+T EV+ +F+TCVQCRGCEPACPSGVPYG L+E TRA LA+ G ++   QRLAF  L  P +LR  S  L +A RL LVP RLG+  ++PL       SG DVYLFTGCVMD WQR+VH AGQRV+EAAG GVTPT DLAPCCGAL  HAGL    R  AE  +  L   D    RPILVDSAGCGAAMK+YGHLL TPEA+AF+ RVYDI EWLA
Sbjct:    5 IDADDLNACVQCGLCLPHCPTYRVTGDEALSPRGRIHLMREVQDNAAPVTPEVVDAFDTCVQCRGCEPACPSGVPYGRLIESTRAVLADKGAVSTRRQRLAFWALSRPRILRLASSLLAIAARLRLVPKRLGVPTDLPLTRGQRHTSGDDVYLFTGCVMDVWQRDVHDAGQRVLEAAGVGVTPTGDLAPCCGALHTHAGLGGPARERAEATITALSTDD----RPILVDSAGCGAAMKEYGHLLDTPEAEAFSARVYDIHEWLA 264          
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Match: A0A6G2K5V2_9ACTN (Glycolate oxidase iron-sulfur subunit n=3 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6G2K5V2_9ACTN)

HSP 1 Score: 360 bits (924), Expect = 8.460e-121
Identity = 186/297 (62.63%), Postives = 212/297 (71.38%), Query Frame = 1
Query:    1 LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLTDEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAGELTPTWQRLAFKPLGHPGLLRAGSKALGVAQRLHLVPDR-LGISAEIPLRSAPLEASGTDVYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGLTDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLGTPEAQAFADRVYDIGEWLAQHVDRLPTVEP---LDLTVAIQDPCHLRHVQK 879
            LD D+L +CV CGLCLP CPTF +TG +  SPRGRIALMR VQ+  AP+T EVL S ETCVQC GCE ACPSGVP+GHLME TRA LA  G +TP WQRL  + L H  LL  GS  L +A RL LVP R LG+ A +PLR      SG+DV+LFTGCVMDAWQR  HRA QRV+EA G GVTPT   APCCGAL AHAGL  D  A A  ++  L   DG   RP+LVDSAGCGAAMK YG LLGT EAQ F+ RV+D+ EWLA+ +D L  + P   L LTVA+QDPCHLRH Q+
Sbjct:    5 LDDDELTSCVACGLCLPHCPTFVITGRDTESPRGRIALMRAVQNEGAPVTAEVLRSMETCVQCLGCETACPSGVPFGHLMETTRAALATEGRITPWWQRLGLRLLRHRRLLLVGSTLLALAGRLGLVPARRLGLPARLPLRRGRHRVSGSDVWLFTGCVMDAWQRHTHRAVQRVLEATGVGVTPTAAAAPCCGALHAHAGLAADASAIARQVIDALSV-DG---RPVLVDSAGCGAAMKHYGRLLGTAEAQDFSARVFDVHEWLAERLDALLAIRPAAPLALTVAVQDPCHLRHGQR 297          
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Match: A0A3M2GMV4_ACTSX (Glycolate oxidase iron-sulfur subunit n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GMV4_ACTSX)

HSP 1 Score: 360 bits (924), Expect = 1.630e-120
Identity = 191/304 (62.83%), Postives = 219/304 (72.04%), Query Frame = 1
Query:    1 LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLTDEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAGELTPTWQRLAFKPLGHPGLLRAGSKALGVAQRLHLVPDR-LGISAEIPLRSAPLEASGTD------VYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGLTDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLG-TPEAQA---FADRVYDIGEWLAQHVDRLPTVEPLDLTVAIQDPCHLRHVQK 879
            LD + L TCVQCGLCLP CPT+RVTGDEA+SPRGRIA+MR V+   AP+ + V+ +F TCVQCRGCEPACP GVP+G L+E+TRA L E G L P WQR AF  LGH  LL A S    VAQRL LVP R LG+   +P+R + L ASG        V+LFTGCVMDAWQREVHRA Q V+EAAG  V PT DLAPCCGAL AHAGLT  TR  A   +ARLD G+     P+LVDSAGCGA +KDY H+L  TP A+A    A RV D+ EWLA+ VD LP VEPL + VA+QDPCHLRHVQK
Sbjct:   21 LDVESLATCVQCGLCLPHCPTWRVTGDEALSPRGRIAVMRSVELDGAPVDETVVDAFATCVQCRGCEPACPCGVPFGRLIEETRARLVEQGRLVPRWQRPAFAVLGHHRLLLALSSLAAVAQRLRLVPSRRLGLP-RLPVRRSRLVASGDPRRDEGAVWLFTGCVMDAWQREVHRAVQTVIEAAGVTVRPTGDLAPCCGALHAHAGLTAGTRRLARRAVARLD-GEA----PVLVDSAGCGAHLKDYAHVLASTPSAEAGAALARRVVDVHEWLAERVDALPRVEPLPVRVAVQDPCHLRHVQK 318          
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Match: A0A2D6KZN4_9ACTN (Glycolate oxidase iron-sulfur subunit n=6 Tax=Actinobacteria TaxID=201174 RepID=A0A2D6KZN4_9ACTN)

HSP 1 Score: 345 bits (884), Expect = 5.590e-115
Identity = 174/293 (59.39%), Postives = 204/293 (69.62%), Query Frame = 1
Query:    1 LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLTDEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAGELTPTWQRLAFKPLGHPGLLRAGSKALGVAQRLHLVPDRLGISAEIPLRSAPLEASGTDVYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGLTDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLGTPEAQAFADRVYDIGEWLAQHVDRLPTVEPLDLTVAIQDPCHLRHVQK 879
            +D D L TCVQCGLCL SCPT+RVTGDE  SPRGR ALMRQVQ HDAPLT EV  +F+TC+QC GCEPACPS VPYGH +E TR  L E        + +A  PL  P LLR GS  L VAQRL LVP RLG+   +PLR  P  +SGTDVYLFTGCVMDAWQREVH A QRV+EAAGFGVTPT D A CCGAL  HAGL        E++ A LDP       P++V+SAGCGA +K +            + +++D  E+LA+H+DRLP V PL++ VA+QDPCHLRHVQ+
Sbjct:    5 IDPDQLGTCVQCGLCLSSCPTYRVTGDETFSPRGRXALMRQVQLHDAPLTSEVTEAFDTCIQCLGCEPACPSVVPYGHFIESTRNALTE--HRGSRRRAIALWPLTKPRLLRLGSSLLAVAQRLRLVPARLGLPNRLPLRRRPHRSSGTDVYLFTGCVMDAWQREVHFATQRVLEAAGFGVTPTGDAAGCCGALHTHAGLAAHGERLTESIDAALDPA-----IPVIVNSAGCGAHLKQHS-----------SHQIFDAQEFLAEHLDRLPDVTPLEVNVAVQDPCHLRHVQR 279          
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Match: A0A6I3BZW8_9ACTN (Glycolate oxidase iron-sulfur subunit n=4 Tax=root TaxID=1 RepID=A0A6I3BZW8_9ACTN)

HSP 1 Score: 342 bits (877), Expect = 1.320e-113
Identity = 177/302 (58.61%), Postives = 213/302 (70.53%), Query Frame = 1
Query:    1 LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLTDEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAG-----ELTPTWQRLAFKPLGHPGLLRAGSKALGVAQRLHLVPD-RLGISAEIPLRSAPLEASGTDVYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGLTDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLGTPEAQAFADRVYDIGEWLAQHVDRLPTVE---PLDLTVAIQDPCHLRHVQK 879
            +D D+L+TCV CGLCLP CPT+RVTG E +SPRGRI+ MR VQ  DAP+  + L + +TCVQCRGCE ACPSGVP+GHL+E TR+TL+EA         P W+RL ++ L HP +LRAG+ ALGV QR  +VP  RLG+ A +PLR   L ASG DV LFTGCVMDAWQR+VH A QRV+E  G  V  + D APCCGAL  HAGL    R  A  ++  + PGD     PILVDSAGCGA +KDYG LLGT EA+AF+ RV D+ EWLA+ +D LP +    P    VA+QDPCHLRHVQK
Sbjct:    5 IDDDELSTCVSCGLCLPHCPTYRVTGIEMLSPRGRISAMRGVQRDDAPVDRDFLHAIDTCVQCRGCETACPSGVPFGHLIEATRSTLSEAPPPGVRSTQPWWRRLGYRVLEHPRVLRAGTLALGVGQRFRVVPSGRLGLPARLPLRQKRLVASGNDVVLFTGCVMDAWQRDVHAAVQRVIELTGARVAISGDTAPCCGALHEHAGLDTRARLLASRVIDAV-PGD----HPILVDSAGCGAMLKDYGRLLGTAEARAFSARVRDVHEWLAERIDLLPALGAGVPRG-KVAVQDPCHLRHVQK 300          
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Match: A0A6N7FP81_9ACTN (Glycolate oxidase iron-sulfur subunit n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FP81_9ACTN)

HSP 1 Score: 340 bits (871), Expect = 7.000e-113
Identity = 179/295 (60.68%), Postives = 200/295 (67.80%), Query Frame = 1
Query:    1 LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLTDEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAGELTPTWQRLAFKPLGHPGLLRAGSKALGVAQRLHLVPD-RLGISAEIPLRSAPLEASGTDVYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGLTDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLGTPEAQAFADRVYDIGEWLAQHVDRLPTVEPLDL-TVAIQDPCHLRHVQK 879
            LD D L  CV CGLCLP CPTFRVTG+E  SPRGRI  MRQV           L   +TCVQCRGCE ACPSGV +G LME TR TLAE     P W+ L  + LGH  LL AGS  L  AQRL LVP  RLG+ A +PLR A L  SG DV+LFTGCVMDAWQR+VH A +RV+EAAG GV      A CCGAL +HAGL  D RA A   M    PG+     P+LVD+AGCGA MKDYGHLLGTPEA+AFA RV D+ EWLA+ +DRLP   P    TVA+QDPCHLRHVQ+
Sbjct:    5 LDEDLLAGCVSCGLCLPHCPTFRVTGEERYSPRGRIEAMRQVHLGGWEADSSFLDIVDTCVQCRGCETACPSGVQFGRLMEATRETLAEETSYQPAWRSLPLRVLGHHRLLLAGSTVLAFAQRLRLVPSARLGLPARLPLRRARLRQSGNDVWLFTGCVMDAWQRDVHAAVKRVLEAAGAGVAIAGPGAACCGALHSHAGLGGDARALARRTMEAF-PGEA----PVLVDAAGCGAEMKDYGHLLGTPEAEAFAARVRDVHEWLAERLDRLPEARPGPRPTVAVQDPCHLRHVQR 294          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84227.19647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2IF40_9ACTN5.650e-14569.28Glycolate oxidase iron-sulfur subunit n=1 Tax=Acid... [more]
A0A2D8LTY8_9ACTN1.410e-13766.55Glycolate oxidase iron-sulfur subunit n=7 Tax=Acid... [more]
A0A6B1EGZ6_9ACTN3.440e-13265.32Glycolate oxidase iron-sulfur subunit n=11 Tax=Aci... [more]
A0A7K2D6N3_9ACTN3.050e-12663.644Fe-4S dicluster domain-containing protein n=1 Tax... [more]
A0A3C1KI97_9MICO3.890e-12467.05Glycolate oxidase (Fragment) n=1 Tax=Microbacteriu... [more]
A0A6G2K5V2_9ACTN8.460e-12162.63Glycolate oxidase iron-sulfur subunit n=3 Tax=Acid... [more]
A0A3M2GMV4_ACTSX1.630e-12062.83Glycolate oxidase iron-sulfur subunit n=1 Tax=Acti... [more]
A0A2D6KZN4_9ACTN5.590e-11559.39Glycolate oxidase iron-sulfur subunit n=6 Tax=Acti... [more]
A0A6I3BZW8_9ACTN1.320e-11358.61Glycolate oxidase iron-sulfur subunit n=4 Tax=root... [more]
A0A6N7FP81_9ACTN7.000e-11360.68Glycolate oxidase iron-sulfur subunit n=1 Tax=Acid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84227contigM-pyrifera_M_contig84227:3..881 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score323.6
Seed ortholog evalue9.8e-86
Seed eggNOG ortholog1313172.YM304_26330
KEGG rclassRC00042
KEGG koko:K11473
KEGG ReactionR00475
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.4Fe-4S dicluster domain
EggNOG OGs2GIVX@201174,4CN2B@84992,COG0247@1,COG0247@2
COG Functional cat.C
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons1
Model size879
Cds size879
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816749.7324255-CDS-M-pyrifera_M_contig84227:2..8811622816749.7324255-CDS-M-pyrifera_M_contig84227:2..881Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84227 3..881 -
1692278155.7827537-CDS-M-pyrifera_M_contig84227:2..8811692278155.7827537-CDS-M-pyrifera_M_contig84227:2..881Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84227 3..881 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84227.19647.1prot_M-pyrifera_M_contig84227.19647.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84227 3..881 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84227.19647.1

>prot_M-pyrifera_M_contig84227.19647.1 ID=prot_M-pyrifera_M_contig84227.19647.1|Name=mRNA_M-pyrifera_M_contig84227.19647.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=293bp
LDADDLNTCVQCGLCLPSCPTFRVTGDEAMSPRGRIALMRQVQDHDAPLT
DEVLTSFETCVQCRGCEPACPSGVPYGHLMEQTRATLAEAGELTPTWQRL
AFKPLGHPGLLRAGSKALGVAQRLHLVPDRLGISAEIPLRSAPLEASGTD
VYLFTGCVMDAWQREVHRAGQRVVEAAGFGVTPTNDLAPCCGALQAHAGL
TDDTRAFAETMMARLDPGDGPEPRPILVDSAGCGAAMKDYGHLLGTPEAQ
AFADRVYDIGEWLAQHVDRLPTVEPLDLTVAIQDPCHLRHVQK
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mRNA from alignment at M-pyrifera_M_contig84227:3..881-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84227.19647.1 ID=mRNA_M-pyrifera_M_contig84227.19647.1|Name=mRNA_M-pyrifera_M_contig84227.19647.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=879bp|location=Sequence derived from alignment at M-pyrifera_M_contig84227:3..881- (Macrocystis pyrifera P11B4 male)
CTCGATGCCGACGATCTCAACACCTGTGTGCAATGCGGCCTCTGCCTGCC TTCGTGTCCGACCTTCCGGGTCACCGGAGACGAGGCCATGTCTCCTCGTG GACGAATCGCCTTGATGCGACAGGTCCAGGACCACGATGCGCCACTCACC GACGAGGTGCTCACCTCGTTCGAGACCTGTGTGCAATGCCGTGGATGCGA ACCGGCCTGTCCTTCCGGCGTGCCGTACGGCCATCTGATGGAACAGACCC GAGCGACGCTGGCCGAGGCGGGCGAACTCACGCCCACCTGGCAGCGCCTG GCCTTCAAGCCGCTCGGCCACCCCGGTCTCCTGCGTGCCGGGTCGAAGGC ACTCGGCGTCGCCCAGCGTCTCCACCTCGTGCCCGATCGGCTGGGGATCT CGGCCGAGATCCCGCTGCGTTCGGCTCCGCTCGAGGCGTCGGGCACCGAC GTCTATCTCTTCACCGGCTGTGTCATGGACGCCTGGCAGCGTGAGGTCCA CCGAGCCGGACAGCGGGTCGTCGAGGCTGCGGGCTTCGGGGTCACCCCCA CCAACGATCTCGCTCCCTGCTGCGGTGCGCTCCAAGCACACGCCGGACTG ACCGACGACACCCGGGCCTTCGCCGAGACGATGATGGCTCGGCTCGATCC GGGAGACGGCCCCGAACCTCGACCCATCCTGGTCGACTCCGCCGGCTGTG GTGCTGCGATGAAGGACTACGGGCATCTGCTCGGAACACCCGAGGCGCAG GCATTCGCCGATCGTGTCTACGACATCGGTGAGTGGCTGGCCCAGCACGT CGACCGCCTCCCGACCGTCGAGCCGCTCGACCTCACCGTTGCGATCCAGG ACCCCTGCCACCTCCGTCATGTGCAGAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84227:3..881-

>mRNA_M-pyrifera_M_contig84227.19647.1 ID=mRNA_M-pyrifera_M_contig84227.19647.1|Name=mRNA_M-pyrifera_M_contig84227.19647.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1758bp|location=Sequence derived from alignment at M-pyrifera_M_contig84227:3..881- (Macrocystis pyrifera P11B4 male)
CTCGATGCCGACGATCTCAACACCTGTGTGCAATGCGGCCTCTGCCTGCC
TTCGTGTCCGACCTTCCGGGTCACCGGAGACGAGGCCATGTCTCCTCGTG
GACGAATCGCCTTGATGCGACAGGTCCAGGACCACGATGCGCCACTCACC
GACGAGGTGCTCACCTCGTTCGAGACCTGTGTGCAATGCCGTGGATGCGA
ACCGGCCTGTCCTTCCGGCGTGCCGTACGGCCATCTGATGGAACAGACCC
GAGCGACGCTGGCCGAGGCGGGCGAACTCACGCCCACCTGGCAGCGCCTG
GCCTTCAAGCCGCTCGGCCACCCCGGTCTCCTGCGTGCCGGGTCGAAGGC
ACTCGGCGTCGCCCAGCGTCTCCACCTCGTGCCCGATCGGCTGGGGATCT
CGGCCGAGATCCCGCTGCGTTCGGCTCCGCTCGAGGCGTCGGGCACCGAC
GTCTATCTCTTCACCGGCTGTGTCATGGACGCCTGGCAGCGTGAGGTCCA
CCGAGCCGGACAGCGGGTCGTCGAGGCTGCGGGCTTCGGGGTCACCCCCA
CCAACGATCTCGCTCCCTGCTGCGGTGCGCTCCAAGCACACGCCGGACTG
ACCGACGACACCCGGGCCTTCGCCGAGACGATGATGGCTCGGCTCGATCC
GGGAGACGGCCCCGAACCTCGACCCATCCTGGTCGACTCCGCCGGCTGTG
GTGCTGCGATGAAGGACTACGGGCATCTGCTCGGAACACCCGAGGCGCAG
GCATTCGCCGATCGTGTCTACGACATCGGTGAGTGGCTGGCCCAGCACGT
CGACCGCCTCCCGACCGTCGAGCCGCTCGACCTCACCGTTGCGATCCAGG
ACCCCTGCCACCTCCGTCATGTGCAGAAGCTCGATGCCGACGATCTCAAC
ACCTGTGTGCAATGCGGCCTCTGCCTGCCTTCGTGTCCGACCTTCCGGGT
CACCGGAGACGAGGCCATGTCTCCTCGTGGACGAATCGCCTTGATGCGAC
AGGTCCAGGACCACGATGCGCCACTCACCGACGAGGTGCTCACCTCGTTC
GAGACCTGTGTGCAATGCCGTGGATGCGAACCGGCCTGTCCTTCCGGCGT
GCCGTACGGCCATCTGATGGAACAGACCCGAGCGACGCTGGCCGAGGCGG
GCGAACTCACGCCCACCTGGCAGCGCCTGGCCTTCAAGCCGCTCGGCCAC
CCCGGTCTCCTGCGTGCCGGGTCGAAGGCACTCGGCGTCGCCCAGCGTCT
CCACCTCGTGCCCGATCGGCTGGGGATCTCGGCCGAGATCCCGCTGCGTT
CGGCTCCGCTCGAGGCGTCGGGCACCGACGTCTATCTCTTCACCGGCTGT
GTCATGGACGCCTGGCAGCGTGAGGTCCACCGAGCCGGACAGCGGGTCGT
CGAGGCTGCGGGCTTCGGGGTCACCCCCACCAACGATCTCGCTCCCTGCT
GCGGTGCGCTCCAAGCACACGCCGGACTGACCGACGACACCCGGGCCTTC
GCCGAGACGATGATGGCTCGGCTCGATCCGGGAGACGGCCCCGAACCTCG
ACCCATCCTGGTCGACTCCGCCGGCTGTGGTGCTGCGATGAAGGACTACG
GGCATCTGCTCGGAACACCCGAGGCGCAGGCATTCGCCGATCGTGTCTAC
GACATCGGTGAGTGGCTGGCCCAGCACGTCGACCGCCTCCCGACCGTCGA
GCCGCTCGACCTCACCGTTGCGATCCAGGACCCCTGCCACCTCCGTCATG
TGCAGAAG
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