mRNA_M-pyrifera_M_contig842.19645.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Match: D8LDP4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDP4_ECTSI) HSP 1 Score: 233 bits (594), Expect = 5.560e-76 Identity = 116/131 (88.55%), Postives = 125/131 (95.42%), Query Frame = 3 Query: 108 MKLFAFLLVVLIGAVSGFVAPSAFRGTAMAAPRATRATSKVASTPVMLDTYWEGKAPPSSVLGPALAKAPSVGLGLVSLVAFAAGTYCIHTTNILHTVSPDSIQPIYVAGALLVPISWGLHVASWIQKQNG 500 MKLFAFLLVVLIGA S FV+PSAF+G+A+AAPRATRATSKV++TPVMLDTYWEGKAPPS VLGPALAKAPS GLG+VSL AFAAGTYCIH TNILHTVSPD+IQP+YVAGALLVPISWGLHVASWIQKQNG Sbjct: 1 MKLFAFLLVVLIGAASAFVSPSAFKGSALAAPRATRATSKVSATPVMLDTYWEGKAPPSEVLGPALAKAPSAGLGVVSLAAFAAGTYCIHETNILHTVSPDNIQPLYVAGALLVPISWGLHVASWIQKQNG 131
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Match: A0A7S1U023_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U023_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.020e-35 Identity = 64/113 (56.64%), Postives = 84/113 (74.34%), Query Frame = 3 Query: 162 VAPSAFRGTAMAAPRATRATSKVASTPVMLDTYWEGKAPPSSVLGPALAKAPSVGLGLVSLVAFAAGTYCIHTTNILHTVSPDSIQPIYVAGALLVPISWGLHVASWIQKQNG 500 VAP+A A APRA R++ K+ T TYWEGK PPS+VLGP L+K PS LG VS+++ AGTY +H +NILHT++ D++ P++V G+LLVPISWGLHVA+WI K+NG Sbjct: 14 VAPAAAFAPARKAPRAMRSSLKMEQTEA--PTYWEGKVPPSTVLGPVLSKTPSGLLGPVSIISLLAGTYSVHESNILHTLNADTVYPVFVIGSLLVPISWGLHVAAWINKENG 124
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Match: A0A836C871_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C871_9STRA) HSP 1 Score: 121 bits (304), Expect = 4.590e-32 Identity = 58/124 (46.77%), Postives = 79/124 (63.71%), Query Frame = 3 Query: 129 LVVLIGAVSGFVAPSAFRGTAMAAPRATRATSKVASTPVMLDTYWEGKAPPSSVLGPALAKAPSVGLGLVSLVAFAAGTYCIHTTNILHTVSPDSIQPIYVAGALLVPISWGLHVASWIQKQNG 500 L + + S F+APS P +A + + DTYWEGKAPPS VLGP +++ PS LG++SL+ GTY +H +NI HT++ D+I P Y+ G+LL P++WG HVASWIQKQNG Sbjct: 11 LAMALATASAFMAPS---------PVMHKAARSAGALKMTEDTYWEGKAPPSKVLGPVVSQIPSPALGVISLICLGVGTYSVHESNIFHTLTADTINPGYIIGSLLTPVAWGTHVASWIQKQNG 125
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Match: A0A4D9DAY0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAY0_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.310e-30 Identity = 71/134 (52.99%), Postives = 84/134 (62.69%), Query Frame = 3 Query: 108 MKLFAFLLVV--LIGAVSGFVAPSAFRGTAMAAPRATRATSKVASTPVMLD-TYWEGKAPPSSVLGPALAKAPSVGLGLVSLVAFAAGTYCIHTTNILHTVSPDSIQPIYVAGALLVPISWGLHVASWIQKQNG 500 MK F LLV+ L G S F+ P A AAP R + +M D TYWEGKAP S+VLGP LAK PS LG SLVA G YC+H +NI + ++ DSI P YV G+ L PISWG+HVA+WIQKQNG Sbjct: 1 MKTFGALLVLMALFGLSSAFM-PKAPVHKVAAAPVVARGRAMK----MMEDSTYWEGKAPSSAVLGPFLAKVPSGVLGPASLVALMVGAYCVHESNIFNILTVDSINPAYVLGSFLTPISWGMHVAAWIQKQNG 129
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Match: A0A7S2S169_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S169_9STRA) HSP 1 Score: 107 bits (266), Expect = 4.450e-26 Identity = 63/132 (47.73%), Postives = 78/132 (59.09%), Query Frame = 3 Query: 105 NMKLFAFLLVVLIGAVSGFVAPSAFRGTAMAAPRATRATSKVASTPVMLDTYWEGKAPPSSVLGPALAKAPSVGLGLVSLVAFAAGTYCIHTTNILHTVSPDSIQPIYVAGALLVPISWGLHVASWIQKQNG 500 MKLF L +L+ ++ PS RA R +V + DTYWEGKAPPS+VLGP L+K S LGL SL A G+YC N+ PD + P++V GA L+PISWGLHVASWIQK+NG Sbjct: 21 TMKLFGVLSTLLVLGMASAFTPSPMARAPRFVARAGRQQQQVVR--MAEDTYWEGKAPPSTVLGPVLSKTNSGLLGLTSLAFLAVGSYCAVQNNLFSL--PD-VNPLFVLGANLLPISWGLHVASWIQKENG 147
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Match: A0A7S2DS21_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DS21_9STRA) HSP 1 Score: 100 bits (250), Expect = 9.350e-24 Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 108 MKLFAFLLVVLIGAVSGFVAPSAFRGTAMAAPRATRATSKVASTPV-MLDTYWEGKAPPSSVLGPALAKAPSVGLGLVSLVAFAAGTYCIHTTNILHTVSPDSIQPIYVAGALLVPISWGLHVASWIQKQNG 500 MKL F L +GAVS FV +A PR + T V V M DTYWEG PPS+VLGP L+K+ S LG+ SL+AF+ G + + ++ I T I P++ A +L+PISWGLHVASWIQK+NG Sbjct: 21 MKLLMFFLT--LGAVSAFVPRTA--------PRFVQQTRSVQKASVRMEDTYWEGNFPPSNVLGPLLSKSSSGVLGIGSLLAFSGGAFGL-SSQIALTSQQLQISPLFCAMTVLIPISWGLHVASWIQKENG 141
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Match: M2Y646_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y646_GALSU) HSP 1 Score: 92.4 bits (228), Expect = 1.410e-20 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 3 Query: 237 TPVMLDTYWEGKAPPSSVLGPALAKAPSVGLGLVSLVAFAAGTYCIHTTNILHTVSPDSIQPIYVAGALLVPISWGLHVASWIQKQNG 500 T V DT+W GK PPS+VLG K PS + S+V G+YC++ +N+L ++ +I P+YV G+LLVP SWGLHVA WIQ +NG Sbjct: 46 TVVAKDTFWTGKVPPSTVLGIG-EKVPSAAYIISSVVCLLVGSYCVYESNLLSPLTVTTINPLYVLGSLLVPYSWGLHVAGWIQLKNG 132
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Match: A0A1X6NZL8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZL8_PORUM) HSP 1 Score: 92.4 bits (228), Expect = 1.450e-20 Identity = 50/104 (48.08%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 192 MAAPRATRAT-SKVASTPVMLDTYWEGKAPPSSVLGPALAKAPSVGLGLV-SLVAFAAGTYCIHTTNILHTVSPDSIQPIYVAGALLVPISWGLHVASWIQKQN 497 +AA R +RAT + + + +DTYWEGKAPPS+VLG L K GL L+ S+++ A G+Y ++ +N+ ++P +++ Y+ +LL PISWGLHVASWIQKQN Sbjct: 31 VAAIRPSRATVTPAGARSLRMDTYWEGKAPPSTVLG--LGKNVPSGLYLLASVLSLALGSYGVYKSNLASPLTPSTVEAQYILASLLAPISWGLHVASWIQKQN 132
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Match: A0A2V3IUA9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA9_9FLOR) HSP 1 Score: 89.7 bits (221), Expect = 1.330e-19 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 213 RATSKVASTPVMLDTYWEGKAPPSSVLGPALAK-APSVGLGLVSLVAFAAGTYCIHTTNILHTVSPDSIQPIYVAGALLVPISWGLHVASWIQKQN 497 R S PV + TYWEG+ PPS +LG L K PS S +A G YC++ +N+++ +S +S+ P ++ G+LLVPISWGLHVA WIQ +N Sbjct: 32 RVASSRRVAPVRMSTYWEGEYPPSEILG--LGKDVPSSLFVFSSAIALLLGCYCVYQSNLINPLSSESVNPQFIVGSLLVPISWGLHVAGWIQGKN 125
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Match: A0A7S3SKP9_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3SKP9_9SPIT) HSP 1 Score: 89.4 bits (220), Expect = 3.160e-19 Identity = 44/83 (53.01%), Postives = 56/83 (67.47%), Query Frame = 3 Query: 252 DTYWEGKAPPSSVLGPALAKAPSVGLGLVSLVAFAAGTYCIHTTNILHTVSPDSIQPIYVAGALLVPISWGLHVASWIQKQNG 500 DT+W K PSSV+ PS G+ S +AF+ G YCI +NI++ +S ++ YVAGALLVP SWGLHVA+WIQKQNG Sbjct: 63 DTWWGDKDYPSSVVLGIGKDVPSSIYGVTSAIAFSVGAYCIAQSNIINILSGSTVNGFYVAGALLVPYSWGLHVAAWIQKQNG 145 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig842.19645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig842.19645.1 >prot_M-pyrifera_M_contig842.19645.1 ID=prot_M-pyrifera_M_contig842.19645.1|Name=mRNA_M-pyrifera_M_contig842.19645.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp MKLFAFLLVVLIGAVSGFVAPSAFRGTAMAAPRATRATSKVASTPVMLDTback to top mRNA from alignment at M-pyrifera_M_contig842:21642..28929+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig842.19645.1 ID=mRNA_M-pyrifera_M_contig842.19645.1|Name=mRNA_M-pyrifera_M_contig842.19645.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7288bp|location=Sequence derived from alignment at M-pyrifera_M_contig842:21642..28929+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig842:21642..28929+ >mRNA_M-pyrifera_M_contig842.19645.1 ID=mRNA_M-pyrifera_M_contig842.19645.1|Name=mRNA_M-pyrifera_M_contig842.19645.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig842:21642..28929+ (Macrocystis pyrifera P11B4 male)back to top |