mRNA_M-pyrifera_M_contig84178.19641.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84178.19641.1
Unique NamemRNA_M-pyrifera_M_contig84178.19641.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Match: A0A2E3MFK5_9GAMM (Cell division protein ZapE n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MFK5_9GAMM)

HSP 1 Score: 146 bits (368), Expect = 9.600e-40
Identity = 70/145 (48.28%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 YFYPLNDENVVRLQAAFERVVKGPIKHGE-MDVNTRMIDTVAHADNAAWFEFSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVFYDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYL 432
            Y++PL  E   ++Q  F R+ KGPIK GE + +  R I T+  + +  WFEF  +C  PRS+ DYL LA+ +  + VS VP+I   QD++ TY I++VDV YD    LI+SAA P+ ++Y EG K FEF+RT+SRL EMQS EYL
Sbjct:  213 YYHPLGPETRAKMQQTFSRIAKGPIKVGETISIANRPIKTIQRSTHIIWFEFVDLCSTPRSQMDYLALAQRYQTIMVSNVPKITPQQDNVITYLINLVDVLYDANIVLILSAATPVPELYTEGRKVFEFQRTQSRLWEMQSFEYL 357          
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Match: A0A0W0WLE1_9GAMM (ATPase N2B (Nucleotide (GTP) binding protein) n=2 Tax=Legionella TaxID=445 RepID=A0A0W0WLE1_9GAMM)

HSP 1 Score: 139 bits (351), Expect = 2.620e-37
Identity = 66/144 (45.83%), Postives = 92/144 (63.89%), Query Frame = 1
Query:    1 YFYPLNDENVVRLQAAFERVVKGPIKHGEMDVNTRMIDTVAHADNAAWFEFSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVFYDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYL 432
            Y YPL+++N V +   F  + K   ++G +++  R I  +   +   WF+F  IC +PRS  DYL +AE FD VF+SG+PQ+  N    A   IH +DV YD+G +LIISAAVP+ D+YL+G    EF RT SRLQEMQ+ +YL
Sbjct:  205 YLYPLDEKNQVIMAEQFASLTKVVQENGSLNIQNREIPYIKCGEQEVWFDFKVICNLPRSNLDYLEIAERFDTVFLSGIPQLSENDTVYALLLIHFIDVLYDRGIRLIISAAVPLEDLYLKGEVKGEFTRTLSRLQEMQAADYL 348          
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Match: A0A098GDT1_TATMI (Cell division protein ZapE n=2 Tax=Legionellaceae TaxID=444 RepID=A0A098GDT1_TATMI)

HSP 1 Score: 137 bits (344), Expect = 2.720e-36
Identity = 68/144 (47.22%), Postives = 92/144 (63.89%), Query Frame = 1
Query:    1 YFYPLNDENVVRLQAAFERVVKGPIKHGEMDVNTRMIDTVAHADNAAWFEFSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVFYDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYL 432
            Y  PLN++N   L A FE++ K   ++G + +  R I  +       WF+F  IC +PRS  DYL +AE FD VFVSG+PQ+       A   IH+VDV YD+G +LIISAAVP+  +Y++G    EF+RT SRLQEMQ+V+YL
Sbjct:  203 YLCPLNEKNDAILAAQFEQLAKIVQENGVLQIQNRGIPFIKCGKQEIWFDFKVICNLPRSNLDYLEIAERFDTVFVSGIPQLGEKDTVFALLLIHLVDVLYDRGIRLIISAAVPLDSLYVQGEVKEEFKRTLSRLQEMQAVDYL 346          
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Match: UPI0020051EF9 (cell division protein ZapE n=2 Tax=Marinobacter TaxID=2742 RepID=UPI0020051EF9)

HSP 1 Score: 137 bits (344), Expect = 2.940e-36
Identity = 65/145 (44.83%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 YFYPLNDENVVRLQAAFERVVKGPIKHGE-MDVNTRMIDTVAHADNAAWFEFSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVFYDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYL 432
            Y +PL+ E  V L+ +++ +     KH + M++N R I  +AHAD+  WF+F  +C  PRS++DY+ LA  F  + VS VP +  ++D  A  F++M+D FYD+  K+I+SAA P+ D+Y  G  +FEFERT+SRL EMQS EYL
Sbjct:  215 YHFPLDAEADVSLRTSYDALAVEAAKHSKSMEINGRKIPAIAHADDVVWFDFKDVCDGPRSQNDYIELARQFHAIIVSNVPVLGGDKDDQARRFVNMIDEFYDRNVKVILSAAAPITDLYAGGRLSFEFERTESRLLEMQSQEYL 359          
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Match: A0A2G6DYE5_9GAMM (Cell division protein ZapE n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2G6DYE5_9GAMM)

HSP 1 Score: 136 bits (343), Expect = 4.470e-36
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 1
Query:    1 YFYPLNDENVVRLQAAFERVVKGPIKHGE-MDVNTRMIDTVAHADNAAWFEFSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVFYDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYLC 435
            Y+ PL+D     L AAFER+     KH E ++VN R + +   AD+  WFEF+A+C  PRS+ DY+ LA  +  V +SG+P +  + D  A  FI++VD FYD+  KLI+SA  P++++Y EG   FEF+RT SRLQEMQS EYL 
Sbjct:  219 YYTPLDDAAEAGLSAAFERIAPEAPKHWERLEVNGRYLSSKRVADDVVWFEFAALCDGPRSQSDYIELARIYHAVLLSGIPAMGSHNDDAARRFINLVDEFYDRNVKLIVSAEKPLFELYGEGRLNFEFDRTISRLQEMQSHEYLA 364          
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Match: A0A1G0G049_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_35_23 TaxID=1798274 RepID=A0A1G0G049_9GAMM)

HSP 1 Score: 135 bits (339), Expect = 1.350e-35
Identity = 70/145 (48.28%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 YFYPLNDENVVRLQAAFERVVKGPIKHGE-MDVNTRMIDTVAHADNAAWFEFSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVFYDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYL 432
            YFYP + E    L + F+ +   PI+  + + V+ R I+T     NA WF+F+ +C +PRS+ DYL L++ FDYVF+SGV  +   ++ L + FI ++DVFYD  TKLII A+VP+ DIY +G   FEFERTKSRL EMQS  YL
Sbjct:  201 YFYPQDPEMWDLLFSKFKALALPPIEFAQKIVVDDRFIETTYQTCNAIWFDFNKLCGIPRSQTDYLILSKQFDYVFLSGVHHLLEYENDLISNFIKLIDVFYDISTKLIILASVPINDIYRQGRHQFEFERTKSRLFEMQSESYL 345          
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Match: A0A3E0H5D5_9GAMM (Cell division protein ZapE n=1 Tax=Paraperlucidibaca baekdonensis TaxID=748120 RepID=A0A3E0H5D5_9GAMM)

HSP 1 Score: 134 bits (336), Expect = 4.980e-35
Identity = 59/145 (40.69%), Postives = 94/145 (64.83%), Query Frame = 1
Query:    1 YFYPLNDENVVRLQAAFERVVKGP-IKHGEMDVNTRMIDTVAHADNAAWFEFSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVFYDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYL 432
            Y+ PLND++   L A F  +  G  ++   +D+N+R ++    +++  W +F+A+C+ PRS HDY+ LA  +  V ++ VP +  + D  A  FI+++D FYD+G KL++SA  P+  +Y  G  +FEFERT+SRLQEMQS +YL
Sbjct:  221 YYSPLNDQSAATLAARFADLTAGQLVQESPLDINSRSVEVYGRSEDVLWLDFAALCEQPRSAHDYIELAREYHSVLLANVPMMNVDNDDAARRFINLIDEFYDRGVKLVVSAQQPILQLYAGGRLSFEFERTQSRLQEMQSTDYL 365          
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Match: A0A0P8CWY5_9GAMM (Cell division protein ZapE n=14 Tax=Marinobacter TaxID=2742 RepID=A0A0P8CWY5_9GAMM)

HSP 1 Score: 134 bits (336), Expect = 5.560e-35
Identity = 65/145 (44.83%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 YFYPLNDENVVRLQAAFERVVKGPIKHGE-MDVNTRMIDTVAHADNAAWFEFSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVFYDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYL 432
            Y  PL+D+  V L+ +F+ +     KH + M++N R I   AHAD+  WF+F  +C  PRS++DY+ +A  F  + VS VP + +++D  A  F++M+D FYD+  K+IISAA P+ ++Y  G  +FEFERT+SRL EMQS EYL
Sbjct:  227 YHCPLDDQADVSLRNSFDALAVEAGKHSKSMEINGRKIPAQAHADDVVWFDFKDVCDGPRSQNDYIEMARQFHAIIVSNVPVLGKDKDDQARRFVNMIDEFYDRNVKVIISAAAPITELYSGGRLSFEFERTESRLLEMQSQEYL 371          
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Match: W0B894_9GAMM (Putative ATPase n=2 Tax=Legionella oakridgensis TaxID=29423 RepID=W0B894_9GAMM)

HSP 1 Score: 132 bits (332), Expect = 6.580e-35
Identity = 64/144 (44.44%), Postives = 88/144 (61.11%), Query Frame = 1
Query:    1 YFYPLNDENVVRLQAAFERVVKGPIKHGEMDVNTRMIDTVAHADNAAWFEFSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVFYDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYL 432
            Y YPLND     L   FE +    I  G++ +  R I  V  +++A WF F  IC +PRS+ DYL +AE FD VFVS +P++ R+    A   +H +DV YDKG ++I SA VP   +Y EG+   +F+RT SRL+EMQS +YL
Sbjct:  163 YLYPLNDSTNQTLHRQFEAISSEVISEGKLTIQNRCIPFVKCSEHAVWFVFDVICNLPRSQLDYLEIAERFDTVFVSKIPRLTRDDTVRAILLMHFIDVMYDKGVRVIFSAEVPAEQLYTEGAIRHDFQRTLSRLEEMQSSDYL 306          
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Match: A0A0W0VDC8_9GAMM (ATPase N2B (Nucleotide (GTP) binding protein) n=1 Tax=Legionella jordanis TaxID=456 RepID=A0A0W0VDC8_9GAMM)

HSP 1 Score: 133 bits (334), Expect = 8.130e-35
Identity = 63/144 (43.75%), Postives = 89/144 (61.81%), Query Frame = 1
Query:    1 YFYPLNDENVVRLQAAFERVVKGPIKHGEMDVNTRMIDTVAHADNAAWFEFSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVFYDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYL 432
            Y YPLN +    L+  F  +      +G + +  R I     +  A WF+F  IC +PRS+ DYL +AE FD +F+SGVP+++      A   IH +DV YD+G ++IISAAVP+ ++YL+G     F+RT SRLQEMQSV+YL
Sbjct:  206 YVYPLNSDTERILEEQFNAISNPSESNGSLLIQHRSIPFKRRSQRAVWFDFDVICNLPRSQLDYLEIAEQFDTIFISGVPKLREQDTIFAILLIHFIDVMYDRGIRVIISAAVPIEELYLKGEMMVPFKRTLSRLQEMQSVDYL 349          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84178.19641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3MFK5_9GAMM9.600e-4048.28Cell division protein ZapE n=1 Tax=Legionellales b... [more]
A0A0W0WLE1_9GAMM2.620e-3745.83ATPase N2B (Nucleotide (GTP) binding protein) n=2 ... [more]
A0A098GDT1_TATMI2.720e-3647.22Cell division protein ZapE n=2 Tax=Legionellaceae ... [more]
UPI0020051EF92.940e-3644.83cell division protein ZapE n=2 Tax=Marinobacter Ta... [more]
A0A2G6DYE5_9GAMM4.470e-3647.26Cell division protein ZapE n=1 Tax=Gammaproteobact... [more]
A0A1G0G049_9GAMM1.350e-3548.28Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A3E0H5D5_9GAMM4.980e-3540.69Cell division protein ZapE n=1 Tax=Paraperlucidiba... [more]
A0A0P8CWY5_9GAMM5.560e-3544.83Cell division protein ZapE n=14 Tax=Marinobacter T... [more]
W0B894_9GAMM6.580e-3544.44Putative ATPase n=2 Tax=Legionella oakridgensis Ta... [more]
A0A0W0VDC8_9GAMM8.130e-3543.75ATPase N2B (Nucleotide (GTP) binding protein) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84178contigM-pyrifera_M_contig84178:442..879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score143.3
Seed ortholog evalue9.1e-32
Seed eggNOG ortholog1396858.Q666_16350
Preferred namezapE
KEGG koko:K06916
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044424,GO:0044464,GO:0051301
EggNOG free text desc.Reduces the stability of FtsZ polymers in the presence of ATP
EggNOG OGs1MUUW@1224,1RMTJ@1236,464WH@72275,COG1485@1,COG1485@2
COG Functional cat.D
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons1
Model size438
Cds size438
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816749.3268487-CDS-M-pyrifera_M_contig84178:441..8791622816749.3268487-CDS-M-pyrifera_M_contig84178:441..879Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84178 442..879 -
1692278155.4763944-CDS-M-pyrifera_M_contig84178:441..8791692278155.4763944-CDS-M-pyrifera_M_contig84178:441..879Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84178 442..879 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84178.19641.1prot_M-pyrifera_M_contig84178.19641.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84178 442..879 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84178.19641.1

>prot_M-pyrifera_M_contig84178.19641.1 ID=prot_M-pyrifera_M_contig84178.19641.1|Name=mRNA_M-pyrifera_M_contig84178.19641.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
YFYPLNDENVVRLQAAFERVVKGPIKHGEMDVNTRMIDTVAHADNAAWFE
FSAICQVPRSEHDYLFLAENFDYVFVSGVPQIKRNQDHLATYFIHMVDVF
YDKGTKLIISAAVPMWDIYLEGSKTFEFERTKSRLQEMQSVEYLC*
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mRNA from alignment at M-pyrifera_M_contig84178:442..879-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84178.19641.1 ID=mRNA_M-pyrifera_M_contig84178.19641.1|Name=mRNA_M-pyrifera_M_contig84178.19641.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig84178:442..879- (Macrocystis pyrifera P11B4 male)
TATTTTTACCCGCTCAATGATGAAAATGTAGTGCGGTTGCAAGCGGCGTT TGAACGTGTGGTTAAAGGACCAATAAAACACGGTGAGATGGATGTGAATA CACGTATGATTGATACGGTAGCTCATGCTGATAATGCAGCGTGGTTTGAA TTTAGTGCAATATGTCAGGTGCCGCGCAGTGAGCATGACTATTTATTTTT GGCTGAAAATTTTGACTATGTGTTTGTTAGCGGTGTGCCGCAGATTAAAC GCAATCAAGATCATTTGGCGACCTATTTTATCCATATGGTCGACGTGTTT TACGATAAAGGTACCAAACTAATTATATCGGCTGCTGTGCCGATGTGGGA CATCTATCTTGAGGGATCTAAAACCTTTGAATTTGAACGCACTAAAAGCC GTCTGCAAGAGATGCAGAGCGTCGAATATCTATGCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84178:442..879-

>mRNA_M-pyrifera_M_contig84178.19641.1 ID=mRNA_M-pyrifera_M_contig84178.19641.1|Name=mRNA_M-pyrifera_M_contig84178.19641.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig84178:442..879- (Macrocystis pyrifera P11B4 male)
TATTTTTACCCGCTCAATGATGAAAATGTAGTGCGGTTGCAAGCGGCGTT
TGAACGTGTGGTTAAAGGACCAATAAAACACGGTGAGATGGATGTGAATA
CACGTATGATTGATACGGTAGCTCATGCTGATAATGCAGCGTGGTTTGAA
TTTAGTGCAATATGTCAGGTGCCGCGCAGTGAGCATGACTATTTATTTTT
GGCTGAAAATTTTGACTATGTGTTTGTTAGCGGTGTGCCGCAGATTAAAC
GCAATCAAGATCATTTGGCGACCTATTTTATCCATATGGTCGACGTGTTT
TACGATAAAGGTACCAAACTAATTATATCGGCTGCTGTGCCGATGTGGGA
CATCTATCTTGAGGGATCTAAAACCTTTGAATTTGAACGCACTAAAAGCC
GTCTGCAAGAGATGCAGAGCGTCGAATATCTATGCTAGTATTTTTACCCG
CTCAATGATGAAAATGTAGTGCGGTTGCAAGCGGCGTTTGAACGTGTGGT
TAAAGGACCAATAAAACACGGTGAGATGGATGTGAATACACGTATGATTG
ATACGGTAGCTCATGCTGATAATGCAGCGTGGTTTGAATTTAGTGCAATA
TGTCAGGTGCCGCGCAGTGAGCATGACTATTTATTTTTGGCTGAAAATTT
TGACTATGTGTTTGTTAGCGGTGTGCCGCAGATTAAACGCAATCAAGATC
ATTTGGCGACCTATTTTATCCATATGGTCGACGTGTTTTACGATAAAGGT
ACCAAACTAATTATATCGGCTGCTGTGCCGATGTGGGACATCTATCTTGA
GGGATCTAAAACCTTTGAATTTGAACGCACTAAAAGCCGTCTGCAAGAGA
TGCAGAGCGTCGAATATCTATGCTAG
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