mRNA_M-pyrifera_M_contig84176.19639.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84176.19639.1
Unique NamemRNA_M-pyrifera_M_contig84176.19639.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Match: A0A3F3I2B6_9BACT (Big-1 domain-containing protein n=14 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A3F3I2B6_9BACT)

HSP 1 Score: 448 bits (1152), Expect = 9.600e-141
Identity = 230/292 (78.77%), Postives = 260/292 (89.04%), Query Frame = 1
Query:    1 TPTLSNIELTDTAYVEDDGVIEITALLDLEDFDDTNMESATISISNNYFLGEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSDPVELDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDAAVQITNTIEVSDPDNTFLDSAIVVISENFKPAEDSLIYSTIFGITGTYSTSNGRLKLIGNNLLSDYQAALRSIDYKNYATIASGPERVVSFIVSDGPLKSDSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVAITTWADQ 876
            TP L+NIE  D AY E DG + IT+ + + D DDTN+ESATI++S NY LGEDFL F+DTGNI+SSF SG+G+LTLTG+DTK NYQ ALRA+TYENTSSDPV LDRTISF++NDGDNN NT TRDITV+  NSKPVL++IES NL YPDAAVQITNTIEVSDPDNT LDSA+VVIS+NFKPAEDSLIYST+FGITG++++S G LKL G+N+LSDYQAALRS+DY N ATIASGPERVVSFIVSDG LKSDSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVA+TTWADQ
Sbjct:  871 TPVLANIESGDLAYTEGDGAVSITSAITVSDVDDTNIESATITVSGNYTLGEDFLDFNDTGNISSSFTSGSGILTLTGSDTKTNYQTALRAITYENTSSDPVNLDRTISFVINDGDNNSNTETRDITVATVNSKPVLTAIESSNLPYPDAAVQITNTIEVSDPDNTMLDSALVVISDNFKPAEDSLIYSTLFGITGSWNSSTGVLKLTGSNILSDYQAALRSVDYINTATIASGPERVVSFIVSDGELKSDSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVAVTTWADQ 1162          
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Match: A0A3M8G6T4_9BACT (DUF2341 domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G6T4_9BACT)

HSP 1 Score: 441 bits (1135), Expect = 1.880e-138
Identity = 233/292 (79.79%), Postives = 258/292 (88.36%), Query Frame = 1
Query:    1 TPTLSNIELTDTAYVEDDGVIEITALLDLEDFDDTNMESATISISNNYFLGEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSDPVELDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDAAVQITNTIEVSDPDNTFLDSAIVVISENFKPAEDSLIYSTIFGITGTYSTSNGRLKLIGNNLLSDYQAALRSIDYKNYATIASGPERVVSFIVSDGPLKSDSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVAITTWADQ 876
            TP L++IE    +Y E DG + IT+ + L DFDDT+MESATISI+ NY LGEDFL F+DTGNIT SFASGTG+LTL+GTDTKANYQAAL+AVTYENTSSDPVEL RTISF+VNDGDN+ NT TRDITV A NS P+LSSIES NL+YP  AVQITNTI VSDPD+TFLDSAIVVISEN KPAEDSLIYSTIFGITGTY T  GRLKLIGNNLLSDY++ALRS+ YKN+ATI SG +RVVSFIVSDG LKSDSLKRTIDVSPVE+IP+LEVWLRADAGISEGDGVA+TTWADQ
Sbjct:  874 TPILADIEADALSYNEGDGAVAITSAIALSDFDDTDMESATISITANYTLGEDFLDFTDTGNITGSFASGTGILTLSGTDTKANYQAALQAVTYENTSSDPVELTRTISFVVNDGDNDSNTETRDITVVAANSAPILSSIESDNLSYPSEAVQITNTIVVSDPDDTFLDSAIVVISENLKPAEDSLIYSTIFGITGTYDTGTGRLKLIGNNLLSDYESALRSVHYKNFATIPSGTQRVVSFIVSDGSLKSDSLKRTIDVSPVESIPNLEVWLRADAGISEGDGVAVTTWADQ 1165          
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Match: A0A1B6YA02_9BACT (Big-1 domain-containing protein n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6YA02_9BACT)

HSP 1 Score: 437 bits (1123), Expect = 7.730e-137
Identity = 225/292 (77.05%), Postives = 260/292 (89.04%), Query Frame = 1
Query:    1 TPTLSNIELTDTAYVEDDGVIEITALLDLEDFDDTNMESATISISNNYFLGEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSDPVELDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDAAVQITNTIEVSDPDNTFLDSAIVVISENFKPAEDSLIYSTIFGITGTYSTSNGRLKLIGNNLLSDYQAALRSIDYKNYATIASGPERVVSFIVSDGPLKSDSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVAITTWADQ 876
            TP L++IE  D AY E +G +EIT+ + + D DDTN+ESATISI+ NYFLGEDFL F+DTGNI+ SFASG+G+LTLTG+DTKANYQ ALRAVTYENTSSDPV+LDRTISF++NDGDNN NT +RD+TV+  NSKPVLSSIES N+ YPDAAVQITNTI VSDPD+T LDSA+V+I+EN KPAEDSLIYST+FGITG ++ + G LKL GNNLLSDY+AALRS+DY N ATIASGPERVVSFIVSDG LKSD+LKRTIDVSPVETIPDLEVWLRADAGISEG+GVA++TWADQ
Sbjct:  872 TPILADIESGDLAYTEGNGAVEITSAITVSDIDDTNIESATISITANYFLGEDFLDFTDTGNISGSFASGSGILTLTGSDTKANYQTALRAVTYENTSSDPVDLDRTISFVINDGDNNSNTQSRDVTVATVNSKPVLSSIESSNIPYPDAAVQITNTIIVSDPDDTRLDSALVIITENLKPAEDSLIYSTLFGITGNWNPNTGILKLTGNNLLSDYEAALRSVDYINTATIASGPERVVSFIVSDGELKSDTLKRTIDVSPVETIPDLEVWLRADAGISEGNGVAVSTWADQ 1163          
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Match: A0A846FFK3_9CYAN (DUF2341 domain-containing protein (Fragment) n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FFK3_9CYAN)

HSP 1 Score: 372 bits (954), Expect = 3.760e-114
Identity = 200/291 (68.73%), Postives = 231/291 (79.38%), Query Frame = 1
Query:    4 PTLSNIELTDTAYVEDDGVIEITALLDLEDFDDTNMESATISISNNYFLGEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSDPVELDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDAAVQITNTIEVSDPDNTFLDSAIVVISENFKPAEDSLIYSTIFGITGTYSTSNGRLKLIGNNLLSDYQAALRSIDYKNYATIASGPERVVSFIVSDGPLKSDSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVAITTWADQ 876
            PTL++IE     + E D  + IT+ +   D DD N+E ATIS+SNN+ LGED L F+D  NIT S+ S  G+LTL+G+DT+ANYQ ALR+VTYEN SSDP+EL +TISF V DG N  NT TRDI V + NSKP L+SIE+ NL Y D  VQITNTI VSDPD+T LDSA+VVISEN+K  EDSLIYST+FGITG++++S G LKL GNN LSDYQAALRS+ Y N ATIASGPERVVSFI SDG LKSDS KRTIDVSPVETIP+LEVWLRAD GISEGDGVAITTW DQ
Sbjct:  881 PTLASIEAGTLTFTEGDSPLSITSTIVANDADDVNLEGATISVSNNFTLGEDELAFTDFSNITGSWNSALGILTLSGSDTEANYQTALRSVTYENLSSDPIELTKTISFSVTDGTNTSNTETRDIDVVSANSKPELTSIETTNLQYEDVDVQITNTIVVSDPDDTSLDSALVVISENYKSDEDSLIYSTLFGITGSWNSSTGVLKLEGNNSLSDYQAALRSVQYSNTATIASGPERVVSFIASDGDLKSDSTKRTIDVSPVETIPNLEVWLRADVGISEGDGVAITTWEDQ 1171          
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Match: UPI000382E146 (DUF2341 domain-containing protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI000382E146)

HSP 1 Score: 347 bits (890), Expect = 1.550e-105
Identity = 185/291 (63.57%), Postives = 221/291 (75.95%), Query Frame = 1
Query:    4 PTLSNIELTDTAYVEDDGVIEITALLDLEDFDDTNMESATISISNNYFLGEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSDPVELDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDAAVQITNTIEVSDPDNTFLDSAIVVISENFKPAEDSLIYSTIFGITGTYSTSNGRLKLIGNNLLSDYQAALRSIDYKNYATIASGPERVVSFIVSDGPLKSDSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVAITTWADQ 876
            P +S +      Y E  G +     + + D DDTN+ESATI+ISNNY LGED LGF++T NIT S+ S TGVLTLTG+DTKANY+ A+ + T+ENTSSDPVE+ RT S  VNDGDN+ NT TRD+   A NSKPVLS+IE  NL+YP+ AVQITNTIEVSDPDNT +DSA VVIS NFK  EDSLIYST+FGI+G Y+T+NGRLKL G +  SDY+ ALRS+ YKN+ATI SGPERVVSFI+ DG L SD+LKRT+DVS VE I DL+VWLRAD G+    G  + TW DQ
Sbjct:  888 PVISGVSGPAFTYTEGTGAVSPPITVTITDDDDTNIESATIAISNNYQLGEDVLGFTNTANITGSWNSTTGVLTLTGSDTKANYETAIESFTFENTSSDPVEVTRTFSAKVNDGDNDSNTQTRDLDFVAVNSKPVLSNIEGTNLSYPNEAVQITNTIEVSDPDNTMIDSAFVVISGNFKATEDSLIYSTLFGISGNYNTANGRLKLTGTSSFSDYETALRSVKYKNFATIPSGPERVVSFIIHDGDLASDTLKRTLDVSAVEAISDLKVWLRADVGVVTS-GSEVVTWEDQ 1177          
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Match: A0A2D8CE51_9BACT (Big-1 domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D8CE51_9BACT)

HSP 1 Score: 309 bits (792), Expect = 2.200e-92
Identity = 168/294 (57.14%), Postives = 220/294 (74.83%), Query Frame = 1
Query:    1 TPTLSNIELTDTAYVEDDGVIEITAL--LDLEDFDDTNMESATISISNNYFLGEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSDPVELDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDAAVQITNTIEVSDPDNTFLDSAIVVISENFKPAEDSLIYSTIFGITGTYSTSNGRLKLIGNNLLSDYQAALRSIDYKNYATIASGPERVVSFIVSDGPLKSDSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVAITTWADQ 876
            TP+LS I   D  Y E  G ++ +A   + + D D+TNMESATI+I+NNYFLGED LGF +   IT S+ S TG+LTLTGT + A+YQ AL AVTYEN S+DPVEL RTISF VNDG +N NT +R + V ATNS+P+L+++E   L+Y +  +Q+T+TIEVSDPDNT LDSA V+I++N K +EDSL+++ IFGITG+Y+ ++G LKL G N LSDYQ ALR+++YKN+ATI +GPER +SF+  DG L SD++KR I+V+ VE I  LEVWLRAD G+    G  +TTW DQ
Sbjct:  879 TPSLSGIAGADLIYNEGSGAVDGSAAFTVSISDVDNTNMESATIAITNNYFLGEDELGFPNQLGITGSWNSTTGILTLTGTASLADYQTALEAVTYENLSADPVELVRTISFTVNDGISNSNTESRGLDVVATNSQPILTNLEVSELSYDNVPLQLTSTIEVSDPDNTQLDSAFVLITQNLKTSEDSLLFTDIFGITGSYNDASGILKLEGTNSLSDYQTALRTVEYKNFATIPTGPEREISFVAHDGDLASDTVKRVIEVNAVEAISGLEVWLRADTGVLTS-GSVVTTWEDQ 1171          
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Match: A0A6A8Q8S3_9BACT (DUF2341 domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q8S3_9BACT)

HSP 1 Score: 302 bits (774), Expect = 5.710e-90
Identity = 165/292 (56.51%), Postives = 212/292 (72.60%), Query Frame = 1
Query:    1 TPTLSNIELTDTAYVEDDGVIEITALLDLEDFDDTNMESATISISNNYFLGEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSDPVELDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDAAVQITNTIEVSDPDNTFLDSAIVVISENFKPAEDSLIYSTIFGITGTYSTSNGRLKLIGNNLLSDYQAALRSIDYKNYATIASGPERVVSFIVSDGPLKSDSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVAITTWADQ 876
            TP+LS I  +   Y E DG   +   + + D DD NMESA I+I++NY LGED L F+D   I+ S+ S +G LTL+GT + +NY+ AL AVTYENTSSDPVEL RTISF VNDGDN+ NT +RD+ V A+NSKPVLS+IES +L YP + V IT+T+EV+DPDNT LDSA V I+ N+  +ED L+YST+FGITG+++++ GRLKL G N LSDYQAALRS++Y+N A I SG  R VSF   DG L+S+ + RT++VS VE I  L+VWLRAD G+    G  + TW DQ
Sbjct:  872 TPSLSGITGSPVTYNEGDGASTLPITVSISDVDDANMESAEIAITSNYTLGEDELDFTDQLGISGSWNSASGTLTLSGTSSASNYETALEAVTYENTSSDPVELTRTISFTVNDGDNDSNTESRDVDVVASNSKPVLSAIESSDLEYPGSDVIITSTVEVTDPDNTLLDSAFVEITSNYLSSEDELVYSTLFGITGSWNSTTGRLKLEGTNSLSDYQAALRSVEYRNNAGIPSGSSREVSFSAHDGDLESNVVSRTVNVSAVEAISGLDVWLRADLGLITS-GSEVVTWEDQ 1162          
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Match: UPI000366BB3E (DUF2341 domain-containing protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI000366BB3E)

HSP 1 Score: 274 bits (700), Expect = 4.820e-80
Identity = 156/292 (53.42%), Postives = 198/292 (67.81%), Query Frame = 1
Query:    1 TPTLSNIELTDTAYVEDDGVIEITALLDLEDFDDTNMESATISISNNYFLGEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSDPVELDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDAAVQITNTIEVSDPDNTFLDSAIVVISENFKPAEDSLIYSTIFGITGTYSTSNGRLKLIGNNLLSDYQAALRSIDYKNYATIASGPERVVSFIVSDGPLKSDSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVAITTWADQ 876
            TPTLS I      Y E  G +     + + D DD  M SATISISNNY LGED L F+D   IT ++ S TGVL+LTG+ + ANY+ AL +VTYEN+SSDPVEL RTISF VNDG +N NT +RD  ++A NSKP LS +E+ N+ Y    V+IT  I VSDPD+T LDSA V+IS NF  ++DSL +  IFGIT T++   G LKL G   L DY+ ALR++ Y N+A+++SGP R +SF+  DG L SD+LKR I+V+ VE+I  LEVWLRAD G+    G  + TW DQ
Sbjct:  884 TPTLSGITGGVVTYNEGSGPVTGPFTVSISD-DDPTMASATISISNNYILGEDELAFTDQNGITGNWNSFTGVLSLTGSSSIANYETALESVTYENSSSDPVELTRTISFTVNDGTSNSNTQSRDFDINAANSKPELSDLETSNVTYLGNPVEITAEITVSDPDDTQLDSAFVIISNNFDSSQDSLKFQNIFGITSTFNDVTGVLKLEGTASLEDYETALRTVIYDNFASVSSGPNREISFVAHDGELASDTLKRNINVNAVESINGLEVWLRADVGVVTS-GSEVVTWQDQ 1173          
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Match: A0A350PD38_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A350PD38_9BACT)

HSP 1 Score: 241 bits (615), Expect = 6.040e-74
Identity = 125/170 (73.53%), Postives = 144/170 (84.71%), Query Frame = 1
Query:    1 TPTLSNIELTDTAYVEDDGVIEITALLDLEDFDDTNMESATISISNNYFLGEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSDPVELDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDAAVQITNTIEVSDPDNTFLDS 510
            TP L+NIE  D AY E DG + IT+ + + D DDTN+ESATI++S NY LGEDFL F+DTGNI+SSF SG+G+LTLTG+DTK NYQ ALRA+TYENTSSDPV LDRTISF++NDGDNN NT TRDITV+  NSKPVL++IES NL YPDAAVQITNTIEVSDPDNT LDS
Sbjct:  239 TPVLANIESGDLAYTEGDGAVSITSAITVSDVDDTNIESATITVSGNYTLGEDFLDFNDTGNISSSFTSGSGILTLTGSDTKTNYQTALRAITYENTSSDPVNLDRTISFVINDGDNNSNTETRDITVATVNSKPVLTAIESSNLPYPDAAVQITNTIEVSDPDNTMLDS 408          
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Match: A0A3D4UZI8_9BACT (Cadherin domain-containing protein (Fragment) n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3D4UZI8_9BACT)

HSP 1 Score: 221 bits (563), Expect = 6.880e-63
Identity = 129/302 (42.72%), Postives = 190/302 (62.91%), Query Frame = 1
Query:    1 TPTLSNIELTDTAYVEDDGVIEITALLDLEDFDDTNMESATISISNNYFLGEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSDPVE-LDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDA-AVQITNTIEVSDPDNTFLDSAIVVISENFKPAEDSLIYSTIFGITGTYSTSNGRLKLIGNNLLSDYQAALRSIDYKNYATIASGPERVVSFIVSDGPLKSDSLKRTIDVSPVETIPDLEVWLRAD--------AGISEGDGVAITTWADQ 876
            TP L+ IE    ++ E DG   +T+ + + D DD N+E ATI I+NNYFLGED L F +   ITS+F SGTG LTL+GT T ANYQAALRAVT+EN S+DPV  LDRT++  VNDG ++ N+ TRDI+VS+ N+ PVL  IE   + Y    ++++++ I VSD D+T +++    I+ N+  +ED+L+++ IFG+T +++   G L L G    +D+Q+ALR++ Y N ++  S  +R +S   +DG   S+ + R + VS   TI DL VWL+ D         G +  +G  +  W DQ
Sbjct:  441 TPVLAAIEGATISFTEADGPTSLTSTITISDSDDINLEEATIQITNNYFLGEDVLDFVNANGITSNFDSGTGTLTLSGTATVANYQAALRAVTFENISTDPVTGLDRTVTISVNDGLDDSNSQTRDISVSSINTPPVLDDIEQDAILYTTGDSLEVSDDITVSDSDDTNIETVTFQITGNYDSSEDTLVFADIFGVTDSWTDGTGTLTLTGPATKADFQSALRTVRYANTSSNPSDQQRTISITANDGDDNSNIVTRNVTVSVPATINDLTVWLKGDDGTFNATSGGSASTNGGNVRRWEDQ 742          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84176.19639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3F3I2B6_9BACT9.600e-14178.77Big-1 domain-containing protein n=14 Tax=Bacteroid... [more]
A0A3M8G6T4_9BACT1.880e-13879.79DUF2341 domain-containing protein n=1 Tax=Balneola... [more]
A0A1B6YA02_9BACT7.730e-13777.05Big-1 domain-containing protein n=1 Tax=Balneola s... [more]
A0A846FFK3_9CYAN3.760e-11468.73DUF2341 domain-containing protein (Fragment) n=1 T... [more]
UPI000382E1461.550e-10563.57DUF2341 domain-containing protein n=1 Tax=Balneola... [more]
A0A2D8CE51_9BACT2.200e-9257.14Big-1 domain-containing protein n=1 Tax=Balneola s... [more]
A0A6A8Q8S3_9BACT5.710e-9056.51DUF2341 domain-containing protein n=1 Tax=Balneola... [more]
UPI000366BB3E4.820e-8053.42DUF2341 domain-containing protein n=1 Tax=Gracilim... [more]
A0A350PD38_9BACT6.040e-7473.53Uncharacterized protein (Fragment) n=1 Tax=Balneol... [more]
A0A3D4UZI8_9BACT6.880e-6342.72Cadherin domain-containing protein (Fragment) n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84176contigM-pyrifera_M_contig84176:3..878 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score351.7
Seed ortholog evalue3.4e-94
Seed eggNOG ortholog1121104.AQXH01000002_gene585
Preferred nameexbB2
KEGG koko:K01729,ko:K03561,ko:K09942,ko:K12287,ko:K20276
KEGG TC1.A.30.2.1
KEGG ReactionR03706
KEGG Pathwayko00051,ko02024,map00051,map02024
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Large extracellular alpha-helical protein
EggNOG OGsCOG2373@1,COG2373@2,COG2911@1,COG2911@2,COG2931@1,COG2931@2,COG3210@1,COG3210@2,COG5306@1,COG5306@2
EC4.2.2.3
COG Functional cat.U
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko02044
Exons1
Model size876
Cds size876
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816749.2579253-CDS-M-pyrifera_M_contig84176:2..8781622816749.2579253-CDS-M-pyrifera_M_contig84176:2..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84176 3..878 -
1692278155.4330971-CDS-M-pyrifera_M_contig84176:2..8781692278155.4330971-CDS-M-pyrifera_M_contig84176:2..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84176 3..878 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84176.19639.1prot_M-pyrifera_M_contig84176.19639.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84176 3..878 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84176.19639.1

>prot_M-pyrifera_M_contig84176.19639.1 ID=prot_M-pyrifera_M_contig84176.19639.1|Name=mRNA_M-pyrifera_M_contig84176.19639.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=292bp
TPTLSNIELTDTAYVEDDGVIEITALLDLEDFDDTNMESATISISNNYFL
GEDFLGFSDTGNITSSFASGTGVLTLTGTDTKANYQAALRAVTYENTSSD
PVELDRTISFLVNDGDNNGNTVTRDITVSATNSKPVLSSIESGNLAYPDA
AVQITNTIEVSDPDNTFLDSAIVVISENFKPAEDSLIYSTIFGITGTYST
SNGRLKLIGNNLLSDYQAALRSIDYKNYATIASGPERVVSFIVSDGPLKS
DSLKRTIDVSPVETIPDLEVWLRADAGISEGDGVAITTWADQ
back to top

mRNA from alignment at M-pyrifera_M_contig84176:3..878-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84176.19639.1 ID=mRNA_M-pyrifera_M_contig84176.19639.1|Name=mRNA_M-pyrifera_M_contig84176.19639.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig84176:3..878- (Macrocystis pyrifera P11B4 male)
ACCCCTACCCTCTCAAATATAGAACTTACTGATACAGCTTATGTTGAAGA TGATGGAGTGATTGAAATTACTGCGCTTCTAGATTTAGAAGACTTCGATG ATACTAATATGGAAAGTGCCACCATATCCATTAGTAACAATTATTTCCTC GGGGAAGACTTCTTAGGCTTCTCAGATACAGGAAATATTACAAGTAGTTT TGCTTCAGGTACAGGGGTATTAACACTAACAGGAACCGACACAAAAGCAA ATTACCAAGCCGCATTAAGAGCCGTTACCTACGAAAATACTAGTTCTGAT CCTGTGGAATTAGATCGTACGATTTCTTTTTTAGTAAATGACGGAGACAA TAATGGAAATACTGTTACCAGAGACATCACGGTTTCTGCTACAAATTCTA AACCTGTACTGTCTTCTATTGAATCTGGTAATCTAGCTTACCCTGATGCA GCTGTACAAATCACCAATACTATAGAGGTTTCTGATCCTGATAATACCTT TTTAGACAGCGCAATTGTAGTTATTTCAGAGAATTTTAAGCCTGCAGAAG ATTCATTGATTTACTCTACAATATTCGGAATTACCGGAACTTATAGTACC TCCAATGGAAGACTCAAACTTATCGGAAACAATTTACTAAGTGATTACCA GGCAGCTCTTCGATCTATTGATTATAAGAATTATGCTACAATAGCTTCTG GTCCTGAACGAGTAGTGAGCTTTATCGTAAGTGATGGTCCTTTAAAAAGT GACTCTCTTAAAAGAACTATTGATGTAAGCCCCGTAGAAACCATTCCTGA TTTAGAAGTATGGCTTCGTGCTGATGCAGGAATATCAGAAGGTGATGGAG TAGCAATTACAACCTGGGCTGATCAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig84176:3..878-

>mRNA_M-pyrifera_M_contig84176.19639.1 ID=mRNA_M-pyrifera_M_contig84176.19639.1|Name=mRNA_M-pyrifera_M_contig84176.19639.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1752bp|location=Sequence derived from alignment at M-pyrifera_M_contig84176:3..878- (Macrocystis pyrifera P11B4 male)
ACCCCTACCCTCTCAAATATAGAACTTACTGATACAGCTTATGTTGAAGA
TGATGGAGTGATTGAAATTACTGCGCTTCTAGATTTAGAAGACTTCGATG
ATACTAATATGGAAAGTGCCACCATATCCATTAGTAACAATTATTTCCTC
GGGGAAGACTTCTTAGGCTTCTCAGATACAGGAAATATTACAAGTAGTTT
TGCTTCAGGTACAGGGGTATTAACACTAACAGGAACCGACACAAAAGCAA
ATTACCAAGCCGCATTAAGAGCCGTTACCTACGAAAATACTAGTTCTGAT
CCTGTGGAATTAGATCGTACGATTTCTTTTTTAGTAAATGACGGAGACAA
TAATGGAAATACTGTTACCAGAGACATCACGGTTTCTGCTACAAATTCTA
AACCTGTACTGTCTTCTATTGAATCTGGTAATCTAGCTTACCCTGATGCA
GCTGTACAAATCACCAATACTATAGAGGTTTCTGATCCTGATAATACCTT
TTTAGACAGCGCAATTGTAGTTATTTCAGAGAATTTTAAGCCTGCAGAAG
ATTCATTGATTTACTCTACAATATTCGGAATTACCGGAACTTATAGTACC
TCCAATGGAAGACTCAAACTTATCGGAAACAATTTACTAAGTGATTACCA
GGCAGCTCTTCGATCTATTGATTATAAGAATTATGCTACAATAGCTTCTG
GTCCTGAACGAGTAGTGAGCTTTATCGTAAGTGATGGTCCTTTAAAAAGT
GACTCTCTTAAAAGAACTATTGATGTAAGCCCCGTAGAAACCATTCCTGA
TTTAGAAGTATGGCTTCGTGCTGATGCAGGAATATCAGAAGGTGATGGAG
TAGCAATTACAACCTGGGCTGATCAAACCCCTACCCTCTCAAATATAGAA
CTTACTGATACAGCTTATGTTGAAGATGATGGAGTGATTGAAATTACTGC
GCTTCTAGATTTAGAAGACTTCGATGATACTAATATGGAAAGTGCCACCA
TATCCATTAGTAACAATTATTTCCTCGGGGAAGACTTCTTAGGCTTCTCA
GATACAGGAAATATTACAAGTAGTTTTGCTTCAGGTACAGGGGTATTAAC
ACTAACAGGAACCGACACAAAAGCAAATTACCAAGCCGCATTAAGAGCCG
TTACCTACGAAAATACTAGTTCTGATCCTGTGGAATTAGATCGTACGATT
TCTTTTTTAGTAAATGACGGAGACAATAATGGAAATACTGTTACCAGAGA
CATCACGGTTTCTGCTACAAATTCTAAACCTGTACTGTCTTCTATTGAAT
CTGGTAATCTAGCTTACCCTGATGCAGCTGTACAAATCACCAATACTATA
GAGGTTTCTGATCCTGATAATACCTTTTTAGACAGCGCAATTGTAGTTAT
TTCAGAGAATTTTAAGCCTGCAGAAGATTCATTGATTTACTCTACAATAT
TCGGAATTACCGGAACTTATAGTACCTCCAATGGAAGACTCAAACTTATC
GGAAACAATTTACTAAGTGATTACCAGGCAGCTCTTCGATCTATTGATTA
TAAGAATTATGCTACAATAGCTTCTGGTCCTGAACGAGTAGTGAGCTTTA
TCGTAAGTGATGGTCCTTTAAAAAGTGACTCTCTTAAAAGAACTATTGAT
GTAAGCCCCGTAGAAACCATTCCTGATTTAGAAGTATGGCTTCGTGCTGA
TGCAGGAATATCAGAAGGTGATGGAGTAGCAATTACAACCTGGGCTGATC
AA
back to top