mRNA_M-pyrifera_M_contig84173.19638.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Match: A0A7K2AKH5_9ACTN (DUF1524 domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2AKH5_9ACTN) HSP 1 Score: 111 bits (278), Expect = 1.370e-24 Identity = 59/150 (39.33%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 61 WGVGLIASDNCDTRCELLAETQRVDGTWFSSYDGFVSSDPSDFQVDHLVSVNEAHRSGGAAWSLERKAAFYND-RSTGELRVVSGTSNQTKSNKGPSTDSVRYWLPSRGATDQTVTCDFVADWIHVKAVWGLSVDVDEHEALLNLSRSCG 507 +G S C+TRC +L + +R DGTW S YDG V+SD S +DH+V + EAH SG WS R+ + ND R L VS +SN++K ++ PS W PS +++ C + DW+ VK WGL+ D E AL + +CG Sbjct: 314 YGSWTRVSSGCNTRCAVLDDERRADGTWLSWYDGVVTSDSSRLDIDHMVPLAEAHSSGAWQWSSSRRRDYANDLRHPEALAAVSASSNRSKGSRDPS-----EWKPS----NRSAWCRYAQDWVTVKVAWGLTADRAEVGALREMLDTCG 454
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Match: A0A2T0QAG3_9ACTN (Uncharacterized protein DUF1524 n=1 Tax=Allonocardiopsis opalescens TaxID=1144618 RepID=A0A2T0QAG3_9ACTN) HSP 1 Score: 105 bits (262), Expect = 2.700e-24 Identity = 58/151 (38.41%), Postives = 82/151 (54.30%), Query Frame = 1 Query: 82 SDNCDTRCELLA----------ETQRVDGTWFSSYDGFVSSDPSDFQVDHLVSVNEAHRSGGAAWSLERKAAFYNDRSTGELRVVSGTSNQTKSNKGPSTDSVRYWLPSRGATDQTVTCDFVADWIHVKAVWGLSVDVDEHEALLNLSRSC 504 S NC+ R +L + G+W+S YDG S PS Q+DH++ + EA RSG WS R+ F ND +T +L VSG+SNQ+KS++ P+ W+P+R A V C + W++VK VW LSVD E AL ++ C Sbjct: 68 SGNCNARETVLRRDGTNVTVGNDCYPTSGSWYSPYDGVTLSSPSQVQIDHMIPLAEAWRSGADTWSTARREDFANDLATAQLWAVSGSSNQSKSDQDPA-----EWMPTRSA----VHCLYARAWVNVKYVWRLSVDSAERSALTSILNRC 209
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Match: A0A1Q9TXJ8_9ACTN (DUF1524 domain-containing protein n=1 Tax=Nocardiopsis sp. CNR-923 TaxID=1904965 RepID=A0A1Q9TXJ8_9ACTN) HSP 1 Score: 106 bits (264), Expect = 3.010e-24 Identity = 59/158 (37.34%), Postives = 82/158 (51.90%), Query Frame = 1 Query: 61 WGVGLIASDNCDTRCELLA----------ETQRVDGTWFSSYDGFVSSDPSDFQVDHLVSVNEAHRSGGAAWSLERKAAFYNDRSTGELRVVSGTSNQTKSNKGPSTDSVRYWLPSRGATDQTVTCDFVADWIHVKAVWGLSVDVDEHEALLNLSRSC 504 W G+ D+C TR +L + Q V GTW+S YDG ++ D +DH+V +NEA RSG A W+ E + F ND +L VS +SN++K + PS WLP ++ C++ A WI VK W L+VD DE EAL + C Sbjct: 97 WDTGV--QDDCTTRQAVLLRAGEAVEVDEDCQPVSGTWYSVYDGETLTEAGDLDIDHMVPLNEAWRSGAATWATEERRRFANDLDGPQLWAVSASSNRSKGDADPSD-----WLPPL----ESFHCEYTAHWIEVKHTWNLAVDPDEEEALRTVLAGC 243
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Match: A0A017HH59_9RHOB (Putative secreted protein n=2 Tax=Rubellimicrobium TaxID=295418 RepID=A0A017HH59_9RHOB) HSP 1 Score: 104 bits (260), Expect = 3.250e-24 Identity = 67/185 (36.22%), Postives = 96/185 (51.89%), Query Frame = 1 Query: 1 LDVQSERKANYERGDWEQGGWGVGLIASDNC-DTRCELLA---------ETQRVD---GTWFSSYDGFVSSDPSDFQVDHLVSVNEAHRSGGAAWSLERKAAFYNDRSTGE-LRVVSGTSNQTKSNKGPSTDSVRYWLPSRGATDQTVTCDFVADWIHVKAVWGLSVDVDEHEALLNLSRSCGWE 513 + V++ER ++R DW W L +C D R E+LA +TQR D G W +Y G DP VDH+V + EA RSGG W +ER+AA+ ND G L VS ++N++K ++GP WLP + + C +VADW+ VK W LS+D E + N+ R+C + Sbjct: 19 IPVEAERPLGFDREDWPH--W---LDTDRDCQDARQEVLAAESEVPVRWDTQRCDVVSGLWRDAYTGQTVRDPRALDVDHMVPLAEAFRSGGRDWDMERRAAYANDLQDGRTLIAVSASANRSKGDQGP-----EDWLPP----EVSYRCRYVADWVAVKVRWSLSMDERERVTVGNILRACAQD 189
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Match: A0A368T0F9_9ACTN (HNH endonuclease n=1 Tax=Marinitenerispora sediminis TaxID=1931232 RepID=A0A368T0F9_9ACTN) HSP 1 Score: 104 bits (259), Expect = 8.410e-24 Identity = 59/150 (39.33%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 73 LIASDNCDTRCELLA----------ETQRVDGTWFSSYDGFVSSDPSDFQVDHLVSVNEAHRSGGAAWSLERKAAFYNDRSTGELRVVSGTSNQTKSNKGPSTDSVRYWLPSRGATDQTVTCDFVADWIHVKAVWGLSVDVDEHEALLNL 492 + NC+ R +L + GTW S YDG +S PS Q+DH+V + EA RSG W+ R+ +F ND T +L VSG+SNQ+K +K PS WLP ++ C +V WI+VK VW LSVD E AL N+ Sbjct: 69 IAVEGNCNAREYVLRRDGANVTVGNDCYPTSGTWTSPYDGVRTSTPSQVQIDHMVPLAEAWRSGADTWTTSRRQSFANDLDTPQLWAVSGSSNQSKGDKDPS-----EWLPP----STSIHCTYVRSWINVKYVWNLSVDSAERSALQNV 209
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Match: A0A6J6UUI1_9ZZZZ (Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A6J6UUI1_9ZZZZ) HSP 1 Score: 107 bits (267), Expect = 1.270e-23 Identity = 61/148 (41.22%), Postives = 87/148 (58.78%), Query Frame = 1 Query: 85 DNCDTRCELLAETQRV-------DGTWFSSYDGFVSSDPSDFQVDHLVSVNEAHRSGGAAWSLERKAAFYNDRSTGE-LRVVSGTSNQTKSNKGPSTDSVRYWLPSRGATDQTVTCDFVADWIHVKAVWGLSVDVDEHEALLNLSRSC 504 D CDTRCE+L + +R+ +G W S YDG V+ +PS+F +DHLV++ EA RSG + W R+ AF ND L VS +SN++KS++ PS+ W P D+ C +V DW+ VK WGL+VD E AL ++ +C Sbjct: 248 DGCDTRCEVL-KVERLPSVAGLSNGGWLSLYDGKVTDNPSEFDIDHLVALGEAWRSGASEWDGARRQAFANDLDDPRALIAVSASSNRSKSDRDPSS-----WQPP----DKAYWCTYVTDWMAVKLKWGLAVDPIEFTALQSIVEAC 385
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Match: A0A6J6XVQ6_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6XVQ6_9ZZZZ) HSP 1 Score: 101 bits (252), Expect = 2.400e-23 Identity = 58/148 (39.19%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 85 DNCDTRCELLAETQRV-------DGTWFSSYDGFVSSDPSDFQVDHLVSVNEAHRSGGAAWSLERKAAFYNDRSTGE-LRVVSGTSNQTKSNKGPSTDSVRYWLPSRGATDQTVTCDFVADWIHVKAVWGLSVDVDEHEALLNLSRSC 504 + CDTRCE+L + +R+ G W S YDG V+ +PS+F +DHLV++ EA RSG + W R+ AF ND L V+ +SN++KS++ PS+ W P D+ C +V +W+ VK WGL+VD E AL ++ C Sbjct: 24 NGCDTRCEVL-KIERLPSLPGLPSGGWLSLYDGKVTENPSEFDIDHLVALGEAWRSGASEWDGARRQAFANDLDEPRALIAVTASSNRSKSDRDPSS-----WQPP----DKAYWCTYVTEWMAVKLKWGLAVDPIEFTALQSIVEGC 161
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Match: UPI0004756B35 (HNH endonuclease family protein n=2 Tax=Nocardiopsis TaxID=2013 RepID=UPI0004756B35) HSP 1 Score: 103 bits (256), Expect = 4.170e-23 Identity = 58/158 (36.71%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 61 WGVGLIASDNCDTRCELLAET----------QRVDGTWFSSYDGFVSSDPSDFQVDHLVSVNEAHRSGGAAWSLERKAAFYNDRSTGELRVVSGTSNQTKSNKGPSTDSVRYWLPSRGATDQTVTCDFVADWIHVKAVWGLSVDVDEHEALLNLSRSC 504 W G+ DNC TR +L Q V G+W S YD V +D D +DH+V++ EA RSG AW+ E + +F ND T +L VS +SN+ K + P+ W+P + V CD+ A WI VK W L+VD DE + L + C Sbjct: 94 WDSGV--EDNCTTRQVVLERDGEDVESDQNCQPVSGSWSSPYDDEVLTDVQDVDIDHMVALKEAWRSGAHAWTTEERQSFANDLDTTQLWAVSASSNRAKGDADPAD-----WMPP----SEAVHCDYAASWIDVKHTWDLTVDPDEEQTLREILEGC 240
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Match: A0A4S2REQ3_9ACTN (HNH endonuclease n=1 Tax=Streptomyces sp. A1547 TaxID=2563105 RepID=A0A4S2REQ3_9ACTN) HSP 1 Score: 102 bits (255), Expect = 4.490e-23 Identity = 64/180 (35.56%), Postives = 93/180 (51.67%), Query Frame = 1 Query: 1 LDVQSERKANYERGDWEQGGWGVGLIASDNCDTRCE-LLAET----------QRVDGTWFSSYDGFVSSDPSDFQVDHLVSVNEAHRSGGAAWSLERKAAFYNDRSTGE-LRVVSGTSNQTKSNKGPSTDSVRYWLPSRGATDQTVTCDFVADWIHVKAVWGLSVDVDEHEALLNLSRSC 504 L V E + Y+R ++ W GLIASD CDTR E +L+E + G W S+YD V +D + VDH V + E + S W R+ A+ ND+++ + L VS SN++K++K P+ WLP TD + C + A W+ K W L+VD E +ALL L+ C Sbjct: 49 LSVAEEHREGYKRDLYKH--WNKGLIASDGCDTRKEVILSEALEAPTVASGCKLTGGLWRSAYDDVVVTDAARLDVDHFVPLAEVYDSEQTPWDAARREAYANDQNSPDTLIAVSAASNRSKADKDPA-----EWLP----TDGSYHCTYAATWVGTKLRWDLAVDEAERQALLGLAEDC 217
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Match: A0A6I3GEZ3_9ACTN (DUF1524 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I3GEZ3_9ACTN) HSP 1 Score: 101 bits (252), Expect = 7.440e-23 Identity = 58/148 (39.19%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 85 DNCDTRCELLAETQRV-------DGTWFSSYDGFVSSDPSDFQVDHLVSVNEAHRSGGAAWSLERKAAFYNDRSTGE-LRVVSGTSNQTKSNKGPSTDSVRYWLPSRGATDQTVTCDFVADWIHVKAVWGLSVDVDEHEALLNLSRSC 504 + CDTRCE+L + +R+ G W S YDG V+ +PS+F +DHLV++ EA RSG + W R+ AF ND L V+ +SN++KS++ PS+ W P D+ C +V +W+ VK WGL+VD E AL ++ C Sbjct: 69 NGCDTRCEVL-KIERLPSLPGLPSGGWLSLYDGKVTENPSEFDIDHLVALGEAWRSGASEWDGARRQAFANDLDEPRALIAVTASSNRSKSDRDPSS-----WQPP----DKAYWCTYVTEWMAVKLKWGLAVDPIEFTALQSIVEGC 206 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84173.19638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84173.19638.1 >prot_M-pyrifera_M_contig84173.19638.1 ID=prot_M-pyrifera_M_contig84173.19638.1|Name=mRNA_M-pyrifera_M_contig84173.19638.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp LDVQSERKANYERGDWEQGGWGVGLIASDNCDTRCELLAETQRVDGTWFSback to top mRNA from alignment at M-pyrifera_M_contig84173:94..816- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84173.19638.1 ID=mRNA_M-pyrifera_M_contig84173.19638.1|Name=mRNA_M-pyrifera_M_contig84173.19638.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=723bp|location=Sequence derived from alignment at M-pyrifera_M_contig84173:94..816- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84173:94..816- >mRNA_M-pyrifera_M_contig84173.19638.1 ID=mRNA_M-pyrifera_M_contig84173.19638.1|Name=mRNA_M-pyrifera_M_contig84173.19638.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig84173:94..816- (Macrocystis pyrifera P11B4 male)back to top |