mRNA_M-pyrifera_M_contig84133.19633.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Match: D8UCG3_VOLCA (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UCG3_VOLCA) HSP 1 Score: 93.6 bits (231), Expect = 2.260e-20 Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 1 Query: 19 LTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVELLVRELSKMDSNNFAGAIGAGEREGRVICPMVRRRWF 264 L SGL+S Y+ QG +L R R V+ L S RR+PE GW E +E+L+R+ S MDSNNF +G GEREGRV+CP+V RR F Sbjct: 8 LASGLISLSYIRQGEQALARRQRLVKSLLSSRRLPERGWDEATIEMLIRDCSAMDSNNFLDNVGLGEREGRVVCPLVARRHF 89
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Match: A0A250XAB8_9CHLO (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XAB8_9CHLO) HSP 1 Score: 92.8 bits (229), Expect = 3.950e-20 Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 16 ELTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVELLVRELSKMDSNNFAGAIGAGEREGRVICPMVRRRWF 264 +L GL+S Y+ QG +L R + V+ L S RR+PEEGW E+ +E+ +++LS MDSNNF G +G GERE RV CP+V RR + Sbjct: 7 DLACGLISRSYIMQGQQALAKRQKQVKALLSSRRLPEEGWDEQSIEMFIQDLSMMDSNNFVGNVGVGEREARVACPLVARRHY 89
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Match: A0A2J7ZIY9_9CHLO (O-phosphoseryl-tRNA(Sec) selenium transferase (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZIY9_9CHLO) HSP 1 Score: 89.0 bits (219), Expect = 4.350e-20 Identity = 44/82 (53.66%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 19 LTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVELLVRELSKMDSNNFAGAIGAGEREGRVICPMVRRRWF 264 L GLVS Y+ QG +L R R ++ L S R++PE+GW E VE+L+R+ S MDSNNF +G GEREGRV CP V RR F Sbjct: 8 LAVGLVSKSYIRQGEQALARRQRLIKALLSSRKLPEKGWDEATVEMLIRDCSAMDSNNFLDNVGVGEREGRVACPAVARRHF 89
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Match: A0A5A8E414_CAFRO (O-phosphoseryl-tRNA(Sec) selenium transferase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E414_CAFRO) HSP 1 Score: 91.7 bits (226), Expect = 8.240e-20 Identity = 49/82 (59.76%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 19 LTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVELLVRELSKMDSNNFAGAIGAGEREGRVICPMVRRRWF 264 L S LV YV QG SL R R +R+L + R VP GW E DVE L+ ELS MDSNNF G++G GEREGRV CP+VRRR F Sbjct: 8 LASRLVDEAYVRQGRQSLAQRSRLLRELLACRTVPARGWDEMDVERLLLELSAMDSNNFIGSLGLGEREGRVACPLVRRRHF 89
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Match: A0A8J4AWV6_9CHLO (O-phosphoseryl-tRNA(Sec) selenium transferase n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AWV6_9CHLO) HSP 1 Score: 91.7 bits (226), Expect = 1.120e-19 Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 19 LTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVELLVRELSKMDSNNFAGAIGAGEREGRVICPMVRRRWF 264 L +GLVS YV QG +L R R ++ L S RR+PE GW E +E+L+R+ S MDSNNF IG GEREGRV CP+V RR F Sbjct: 8 LAAGLVSLSYVRQGEQALARRQRLIKALLSSRRLPERGWDETTIEMLIRDCSAMDSNNFLDNIGVGEREGRVACPLVARRHF 89
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Match: A0A813CQR3_9DINO (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CQR3_9DINO) HSP 1 Score: 91.7 bits (226), Expect = 1.150e-19 Identity = 49/82 (59.76%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 19 LTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVELLVRELSKMDSNNFAGAIGAGEREGRVICPMVRRRWF 264 L S LV YV QG SL R R +R+L + R VP GW E DVE L+ ELS MDSNNF G++G GEREGRV CP+VRRR F Sbjct: 8 LASRLVDEAYVRQGRQSLAQRSRLLRELLACRTVPARGWDEMDVERLLLELSAMDSNNFIGSLGLGEREGRVACPLVRRRHF 89
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Match: A0A8J4FJQ7_9CHLO (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FJQ7_9CHLO) HSP 1 Score: 89.7 bits (221), Expect = 5.340e-19 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 19 LTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVELLVRELSKMDSNNFAGAIGAGEREGRVICPMVRRRWF 264 L +GLVS Y+ QG +L R R ++ L S RR+PE GW E +E+L+R+ S MDSNNF +G GEREGRV CP+V RR + Sbjct: 8 LAAGLVSLSYIRQGEQALARRQRLIKALLSSRRLPERGWDEATIEMLIRDCSAMDSNNFLDNVGVGEREGRVACPLVARRHY 89
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Match: A0A836BRS4_9CHLO (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BRS4_9CHLO) HSP 1 Score: 89.4 bits (220), Expect = 7.200e-19 Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 1 Query: 16 ELTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVELLVRELSKMDSNNFAGAIGAGEREGRVICPMVRRRWF 264 E GLVS Y+ QG +L R R V+ L S RR+PE+GW E +++ +R+ S MDSNNF G +G GEREGR+ CP V RR F Sbjct: 7 EAARGLVSASYLRQGGEALAARQRRVKALLSSRRLPEQGWDEATLDMFIRDCSAMDSNNFPGNVGVGEREGRLACPAVARRHF 89
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Match: A0A662XDE9_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDE9_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.270e-18 Identity = 44/83 (53.01%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 16 ELTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVELLVRELSKMDSNNFAGAIGAGEREGRVICPMVRRRWF 264 EL + LV YV QG+ ++ GR R V L ++RR+P++GW + VELL+ LS MDSNNF G+ GAGERE RV MV RR F Sbjct: 7 ELAAQLVPATYVQQGLDAVRGRERQVTTLLAQRRLPDDGWDDASVELLLHTLSAMDSNNFRGSAGAGEREARVFSSMVARRHF 89
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Match: A0A812V663_9DINO (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V663_9DINO) HSP 1 Score: 87.4 bits (215), Expect = 3.530e-18 Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 16 ELTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVELLVRELSKMDSNNFAGAIGAGEREGRVICPMVRRRWF 264 +L GLV+ YV Q + + R + V L ++RR+P+ GW+EED++LL+ E++ D+NNF G +G GEREGRVI +VRRR F Sbjct: 7 DLLKGLVNTNYVEQAQQARNSRSKQVTALLTQRRLPDVGWKEEDIQLLLEEMASFDTNNFQGNVGVGEREGRVISDLVRRRHF 89 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84133.19633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84133.19633.1 >prot_M-pyrifera_M_contig84133.19633.1 ID=prot_M-pyrifera_M_contig84133.19633.1|Name=mRNA_M-pyrifera_M_contig84133.19633.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp MEHVGELTSGLVSPGYVSQGIGSLHGRIRGVRQLFSERRVPEEGWREEDVback to top mRNA from alignment at M-pyrifera_M_contig84133:3..266- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84133.19633.1 ID=mRNA_M-pyrifera_M_contig84133.19633.1|Name=mRNA_M-pyrifera_M_contig84133.19633.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=264bp|location=Sequence derived from alignment at M-pyrifera_M_contig84133:3..266- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84133:3..266- >mRNA_M-pyrifera_M_contig84133.19633.1 ID=mRNA_M-pyrifera_M_contig84133.19633.1|Name=mRNA_M-pyrifera_M_contig84133.19633.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig84133:3..266- (Macrocystis pyrifera P11B4 male)back to top |