mRNA_M-pyrifera_M_contig84122.19627.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Match: A0A7X5WQW4_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WQW4_9ACTN) HSP 1 Score: 140 bits (353), Expect = 1.860e-40 Identity = 87/127 (68.50%), Postives = 96/127 (75.59%), Query Frame = 1 Query: 1 MSAADLAAVIVSVVCLGVVIVMVLAVQALVRTLRELRVTVDDLRGATLPMVHDLHSTVSKAGDELERVDAVLXXXXXXXXXXXXXXXLAYKAVAPPLIKTASIVAGAGRATWRLRGGRTRRRAIDVG 381 MSA DLAAVIV++VCL VV +VLAVQ LVRTLRELR TVD+LRGATLPMV DLH+TVS+AG ELERVD V+ L Y+A+APPLIKTAS V GAGRAT RLR G RRRAIDVG Sbjct: 1 MSAVDLAAVIVTIVCLVVVGALVLAVQVLVRTLRELRTTVDELRGATLPMVDDLHATVSRAGGELERVDKVIGRAERITGTVDIASRLTYRAMAPPLIKTASFVVGAGRATRRLRSG-GRRRAIDVG 126
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Match: A0A6N8YAN6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8YAN6_9ACTN) HSP 1 Score: 108 bits (271), Expect = 1.260e-27 Identity = 68/126 (53.97%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 1 MSAADLAAVIVSVVCLGVVIVMVLAVQALVRTLRELRVTVDDLRGATLPMVHDLHSTVSKAGDELERVDAVLXXXXXXXXXXXXXXXLAYKAVAPPLIKTASIVAGAGRATWRLRGGRTRRRAIDV 378 M+A DLAAVIV++VCL V+V+ +A LVRT+RELR VDDLR + LPMV DL STV+KA EL RVD V+ L Y+A APPLIK S+V+GAG+A RLR R RRA+D+ Sbjct: 1 MTAVDLAAVIVTLVCLATVVVLTMAXXXLVRTMRELRDVVDDLRDSALPMVDDLRSTVTKADAELHRVDRVIGRAERIAATADHASRLTYRAFAPPLIKGLSLVSGAGQAGRRLRERRRHRRALDL 126
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Match: A0A6N9EMF5_9ACTN (DUF948 domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EMF5_9ACTN) HSP 1 Score: 98.2 bits (243), Expect = 2.440e-23 Identity = 65/126 (51.59%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 1 MSAADLAAVIVSVVCLGVVIVMVLAVQALVRTLRELRVTVDDLRGATLPMVHDLHSTVSKAGDELERVDAVLXXXXXXXXXXXXXXXLAYKAVAPPLIKTASIVAGAGRATWRLRGGRTRRRAIDV 378 MSA DLAAVIV+VVCL LVRT+RELR VDDLR + LPMV DLH+TV+KA EL RVD V+ L ++A APPLIK S+V+GAG+A RLR R RR +D+ Sbjct: 1 MSAVDLAAVIVTVVCLXXXXXXXXXXXXLVRTMRELRDVVDDLRDSALPMVDDLHATVTKADAELHRVDRVIGRAERIAATVDHASRLTHRAFAPPLIKGLSLVSGAGQAGRRLRDRRRSRRDLDL 126
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Match: A0A6B0WKT5_9ACTN (Uncharacterized protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WKT5_9ACTN) HSP 1 Score: 94.4 bits (233), Expect = 6.170e-22 Identity = 63/126 (50.00%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 1 MSAADLAAVIVSVVCLGVVIVMVLAVQALVRTLRELRVTVDDLRGATLPMVHDLHSTVSKAGDELERVDAVLXXXXXXXXXXXXXXXLAYKAVAPPLIKTASIVAGAGRATWRLRGGRTRRRAIDV 378 M+A DLAAVIV+VVC VRT+RELR VDDLR + LPMV DL +TV+KA EL RVD V+ L Y+A APPLIK S+V+GAG+A RLR R RR++DV Sbjct: 1 MTAVDLAAVIVTVVCXXXXXXXXXXXXXXVRTMRELRDVVDDLRDSALPMVDDLRTTVTKADAELHRVDRVIGRAERIAATADHASRLTYRAFAPPLIKGLSLVSGAGQAGRRLRERRRHRRSLDV 126
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Match: A0A538D4S4_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D4S4_9ACTN) HSP 1 Score: 87.0 bits (214), Expect = 4.080e-19 Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 1 MSAADLAAVIVSVVCLGVVIVMVLAVQALVRTLRELRVTVDDLRGATLPMVHDLHSTVSKAGDELERVDAVLXXXXXXXXXXXXXXXLAYKAVAPPLIKTASIVAGAGRATWRLRGGRTRRRAIDVGSRVR 393 MSA D+AAV+ V+C+ V V+ V+ ++R +R+L + LR T+P+V DL +TV +AGD+L+RV+AVL L Y+A+ PPL+KT + ++GAGRAT RLRG A+ GS R Sbjct: 1 MSAIDVAAVVAIVMCVAVTGAFVVVVRRMIRVVRQLDALAESLRVDTVPLVSDLRATVRQAGDDLDRVEAVLGKAETIATTVDAASRLTYRALRPPLVKTMAFMSGAGRATRRLRGAPA---AVGPGSDAR 128
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Match: A0A6B1BA91_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1BA91_9ACTN) HSP 1 Score: 83.2 bits (204), Expect = 9.820e-18 Identity = 46/86 (53.49%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 106 LRVTVDDLRGATLPMVHDLHSTVSKAGDELERVDAVLXXXXXXXXXXXXXXXLAYKAVAPPLIKTASIVAGAGRATWRLRGGRTRR 363 LR T+D+LRG +LPM DL +TV+KAGDELERVD V+ L K PPLIKTA+I+ GAGRAT LR GR+R+ Sbjct: 36 LRETIDELRGESLPMFDDLRTTVTKAGDELERVDEVIGRVERVVATADVASRLTQKVFTPPLIKTAAIMKGAGRATLTLRRGRSRK 121
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Match: A0A2D8LRB7_9ACTN (Uncharacterized protein n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LRB7_9ACTN) HSP 1 Score: 72.8 bits (177), Expect = 9.120e-14 Identity = 54/128 (42.19%), Postives = 67/128 (52.34%), Query Frame = 1 Query: 1 MSAADLAAVIVSVVCLGVVIVMVLAVQALVRTLRELRVTVDDLRGATLPMVHDLHSTVSKAGDELERVDAVLXXXXXXXXXXXXXXXLAYKAVAPPLIKTASIVAGAGRATWRLRGGRTRRRAIDVGS 384 MSA DLAAVIV++VCL V R TLPMV DLHSTV++A DEL+RVD V+ LAY+A AP +I+ S++AGAGRA + R R AI+V S Sbjct: 1 MSATDLAAVIVTIVCLAVXXXXXXXXXXXXXXXXXXXXXXXXXRANTLPMVDDLHSTVNRASDELDRVDGVIDRAERVTATADVASRLAYRAFAPGVIRAMSVLAGAGRAGRVIARPRRRSGAIEVRS 128
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Match: A0A538GV10_9ACTN (DUF948 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538GV10_9ACTN) HSP 1 Score: 69.7 bits (169), Expect = 9.110e-13 Identity = 49/115 (42.61%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 1 MSAADLAAVIVSVVCLGVVIVMVLAVQALVRTLRELRVTVDDLRGATLPMVHDLHSTVSKAGDELERVDAVLXXXXXXXXXXXXXXXLAYKAVAPPLIKTASIVAGAGRATWRLR 345 MSA D AAV + + V+ +++A+ +L RTL LRVTVDDLR T+P++ D+ +TV +A ELERVDA+L LAY A + P+IK ++ AG RA R R Sbjct: 1 MSAGDWAAVAAAGAAVLAVVGVLVAMASLTRTLAALRVTVDDLRRQTVPLLGDVQTTVRQANAELERVDALLGTAESISTTVDSASRLAYLAFSNPVIKALALGAGTSRAVRRFR 115
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Match: A0A6I3F9Q5_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3F9Q5_9ACTN) HSP 1 Score: 63.9 bits (154), Expect = 3.160e-10 Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 1 Query: 58 IVMVLAVQALVRTLRELRVTVDDLRGATLPMVHDLHSTVSKAGDELERVDAVLXXXXXXXXXXXXXXXLAYKAVAPPLIKTASIVAGAGRATWRL 342 +V+ +AVQ+L+ TLR LR TV+DLR TL V +L +TV+ A E+ERVD++L LA+ + PL+K AS + RAT RL Sbjct: 17 VVVAMAVQSLIGTLRSLRETVEDLRAETLSAVAELRATVALANGEIERVDSLLDTAETVSARVEATSRLAWLVMRNPLVKLASASVASDRATRRL 111
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Match: UPI001E2B0030 (hypothetical protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E2B0030) HSP 1 Score: 63.2 bits (152), Expect = 4.880e-10 Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 1 Query: 58 IVMVLAVQALVRTLRELRVTVDDLRGATLPMVHDLHSTVSKAGDELERVDAVLXXXXXXXXXXXXXXXLAYKAVAPPLIKTASIVAGAGRATWRL 342 +V+ +AVQ+L+ TLR LR TVDDLR TLP + +L +TV A EL+RVD++L L + V PL+K AS R RL Sbjct: 17 VVVAMAVQSLITTLRSLRETVDDLRRETLPAIAELRATVDAANGELQRVDSLLDTAEDVSARVDATSKLTWMVVRNPLVKLASASVATERVARRL 111 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84122.19627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84122.19627.1 >prot_M-pyrifera_M_contig84122.19627.1 ID=prot_M-pyrifera_M_contig84122.19627.1|Name=mRNA_M-pyrifera_M_contig84122.19627.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp MSAADLAAVIVSVVCLGVVIVMVLAVQALVRTLRELRVTVDDLRGATLPMback to top mRNA from alignment at M-pyrifera_M_contig84122:123..518+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84122.19627.1 ID=mRNA_M-pyrifera_M_contig84122.19627.1|Name=mRNA_M-pyrifera_M_contig84122.19627.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig84122:123..518+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84122:123..518+ >mRNA_M-pyrifera_M_contig84122.19627.1 ID=mRNA_M-pyrifera_M_contig84122.19627.1|Name=mRNA_M-pyrifera_M_contig84122.19627.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig84122:123..518+ (Macrocystis pyrifera P11B4 male)back to top |